Multiple sequence alignment - TraesCS7B01G177800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G177800 chr7B 100.000 3454 0 0 1 3454 255050216 255046763 0.000000e+00 6379
1 TraesCS7B01G177800 chr7B 99.282 2785 20 0 339 3123 155733868 155731084 0.000000e+00 5033
2 TraesCS7B01G177800 chr7B 98.888 2788 25 5 340 3123 291563686 291560901 0.000000e+00 4972
3 TraesCS7B01G177800 chr7B 98.853 2789 27 5 340 3123 152475664 152478452 0.000000e+00 4968
4 TraesCS7B01G177800 chr7B 96.318 2200 73 4 929 3123 418741987 418744183 0.000000e+00 3607
5 TraesCS7B01G177800 chr7B 100.000 274 0 0 3181 3454 152478456 152478729 1.110000e-139 507
6 TraesCS7B01G177800 chr7B 99.635 274 1 0 3181 3454 155731080 155730807 5.150000e-138 501
7 TraesCS7B01G177800 chr7B 99.270 274 2 0 3181 3454 291560897 291560624 2.390000e-136 496
8 TraesCS7B01G177800 chr4A 99.354 2786 16 2 340 3123 611029043 611031828 0.000000e+00 5044
9 TraesCS7B01G177800 chr4A 99.635 274 1 0 3181 3454 611031832 611032105 5.150000e-138 501
10 TraesCS7B01G177800 chr1A 99.102 2784 15 1 340 3123 440449531 440452304 0.000000e+00 4994
11 TraesCS7B01G177800 chr1A 100.000 274 0 0 3181 3454 440452308 440452581 1.110000e-139 507
12 TraesCS7B01G177800 chr2B 99.031 2787 13 2 338 3123 309475986 309478759 0.000000e+00 4985
13 TraesCS7B01G177800 chr2B 99.275 276 2 0 3179 3454 309478761 309479036 1.850000e-137 499
14 TraesCS7B01G177800 chr5B 98.027 2788 51 4 340 3123 589808273 589811060 0.000000e+00 4841
15 TraesCS7B01G177800 chr5B 99.270 274 2 0 3181 3454 589811064 589811337 2.390000e-136 496
16 TraesCS7B01G177800 chr6A 96.227 2200 71 5 929 3123 189558725 189556533 0.000000e+00 3592
17 TraesCS7B01G177800 chr6A 85.276 163 14 9 811 968 184363896 184363739 3.570000e-35 159
18 TraesCS7B01G177800 chr5A 95.297 489 19 4 340 825 246822540 246822053 0.000000e+00 773
19 TraesCS7B01G177800 chr7A 97.941 340 7 0 1 340 332423020 332422681 1.070000e-164 590
20 TraesCS7B01G177800 chr7D 97.929 338 7 0 1 338 299159005 299158668 1.380000e-163 586
21 TraesCS7B01G177800 chr3B 99.635 274 1 0 3181 3454 700383467 700383740 5.150000e-138 501
22 TraesCS7B01G177800 chr2A 98.561 278 3 1 3178 3454 208558356 208558079 1.110000e-134 490
23 TraesCS7B01G177800 chrUn 94.872 234 10 2 340 571 462395159 462394926 7.040000e-97 364


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G177800 chr7B 255046763 255050216 3453 True 6379.0 6379 100.0000 1 3454 1 chr7B.!!$R1 3453
1 TraesCS7B01G177800 chr7B 418741987 418744183 2196 False 3607.0 3607 96.3180 929 3123 1 chr7B.!!$F1 2194
2 TraesCS7B01G177800 chr7B 155730807 155733868 3061 True 2767.0 5033 99.4585 339 3454 2 chr7B.!!$R2 3115
3 TraesCS7B01G177800 chr7B 152475664 152478729 3065 False 2737.5 4968 99.4265 340 3454 2 chr7B.!!$F2 3114
4 TraesCS7B01G177800 chr7B 291560624 291563686 3062 True 2734.0 4972 99.0790 340 3454 2 chr7B.!!$R3 3114
5 TraesCS7B01G177800 chr4A 611029043 611032105 3062 False 2772.5 5044 99.4945 340 3454 2 chr4A.!!$F1 3114
6 TraesCS7B01G177800 chr1A 440449531 440452581 3050 False 2750.5 4994 99.5510 340 3454 2 chr1A.!!$F1 3114
7 TraesCS7B01G177800 chr2B 309475986 309479036 3050 False 2742.0 4985 99.1530 338 3454 2 chr2B.!!$F1 3116
8 TraesCS7B01G177800 chr5B 589808273 589811337 3064 False 2668.5 4841 98.6485 340 3454 2 chr5B.!!$F1 3114
9 TraesCS7B01G177800 chr6A 189556533 189558725 2192 True 3592.0 3592 96.2270 929 3123 1 chr6A.!!$R2 2194

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
182 183 0.034616 GAGCTGCGCTTGAGGGATAT 59.965 55.0 9.73 0.00 39.88 1.63 F
292 293 0.330941 TGCATACCCAGGATTGTGCA 59.669 50.0 7.99 7.99 39.94 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1668 1701 2.299993 TTGCAGCAATAGTCTCCTCG 57.700 50.0 2.83 0.0 0.00 4.63 R
2888 2923 0.459237 GTCAGTCCTGATCACCTGCG 60.459 60.0 0.00 0.0 42.18 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.821031 AACTGGTACTTGTGTTTTGTGTAA 57.179 33.333 0.00 0.00 0.00 2.41
24 25 6.185852 ACTGGTACTTGTGTTTTGTGTAAC 57.814 37.500 0.00 0.00 37.35 2.50
25 26 5.124297 ACTGGTACTTGTGTTTTGTGTAACC 59.876 40.000 0.00 0.00 34.36 2.85
26 27 5.008331 TGGTACTTGTGTTTTGTGTAACCA 58.992 37.500 0.00 0.00 34.36 3.67
27 28 5.124138 TGGTACTTGTGTTTTGTGTAACCAG 59.876 40.000 0.00 0.00 34.36 4.00
28 29 4.104696 ACTTGTGTTTTGTGTAACCAGC 57.895 40.909 0.00 0.00 34.36 4.85
29 30 3.508012 ACTTGTGTTTTGTGTAACCAGCA 59.492 39.130 0.00 0.00 34.36 4.41
30 31 4.021894 ACTTGTGTTTTGTGTAACCAGCAA 60.022 37.500 0.00 0.00 34.36 3.91
31 32 3.839293 TGTGTTTTGTGTAACCAGCAAC 58.161 40.909 0.00 0.00 34.36 4.17
32 33 3.183754 GTGTTTTGTGTAACCAGCAACC 58.816 45.455 0.00 0.00 34.36 3.77
33 34 2.826128 TGTTTTGTGTAACCAGCAACCA 59.174 40.909 0.00 0.00 34.36 3.67
34 35 3.449018 TGTTTTGTGTAACCAGCAACCAT 59.551 39.130 0.00 0.00 34.36 3.55
35 36 4.645136 TGTTTTGTGTAACCAGCAACCATA 59.355 37.500 0.00 0.00 34.36 2.74
36 37 4.839668 TTTGTGTAACCAGCAACCATAC 57.160 40.909 0.00 0.00 34.36 2.39
37 38 3.493767 TGTGTAACCAGCAACCATACA 57.506 42.857 0.00 0.00 34.36 2.29
38 39 3.142951 TGTGTAACCAGCAACCATACAC 58.857 45.455 7.28 7.28 44.03 2.90
39 40 3.142951 GTGTAACCAGCAACCATACACA 58.857 45.455 8.93 0.00 43.52 3.72
40 41 3.058501 GTGTAACCAGCAACCATACACAC 60.059 47.826 8.93 0.00 43.52 3.82
41 42 1.234821 AACCAGCAACCATACACACG 58.765 50.000 0.00 0.00 0.00 4.49
42 43 1.234615 ACCAGCAACCATACACACGC 61.235 55.000 0.00 0.00 0.00 5.34
43 44 0.955428 CCAGCAACCATACACACGCT 60.955 55.000 0.00 0.00 0.00 5.07
44 45 1.674519 CCAGCAACCATACACACGCTA 60.675 52.381 0.00 0.00 0.00 4.26
45 46 2.279741 CAGCAACCATACACACGCTAT 58.720 47.619 0.00 0.00 0.00 2.97
46 47 2.030823 CAGCAACCATACACACGCTATG 59.969 50.000 0.00 0.00 0.00 2.23
47 48 1.330521 GCAACCATACACACGCTATGG 59.669 52.381 7.27 7.27 44.47 2.74
48 49 2.899976 CAACCATACACACGCTATGGA 58.100 47.619 14.17 0.00 42.38 3.41
49 50 2.866156 CAACCATACACACGCTATGGAG 59.134 50.000 14.17 4.55 42.38 3.86
50 51 1.202533 ACCATACACACGCTATGGAGC 60.203 52.381 14.17 0.00 42.38 4.70
68 69 9.512588 CTATGGAGCAAGATAATAAATCTGGTT 57.487 33.333 0.00 0.00 0.00 3.67
69 70 8.773033 ATGGAGCAAGATAATAAATCTGGTTT 57.227 30.769 0.00 0.00 0.00 3.27
70 71 7.999679 TGGAGCAAGATAATAAATCTGGTTTG 58.000 34.615 0.00 0.00 0.00 2.93
71 72 6.920210 GGAGCAAGATAATAAATCTGGTTTGC 59.080 38.462 0.00 0.00 31.72 3.68
72 73 7.408756 AGCAAGATAATAAATCTGGTTTGCA 57.591 32.000 10.40 0.00 33.15 4.08
73 74 8.015185 AGCAAGATAATAAATCTGGTTTGCAT 57.985 30.769 10.40 0.00 33.15 3.96
74 75 9.135189 AGCAAGATAATAAATCTGGTTTGCATA 57.865 29.630 10.40 0.00 33.15 3.14
75 76 9.403110 GCAAGATAATAAATCTGGTTTGCATAG 57.597 33.333 0.00 0.00 31.83 2.23
83 84 9.976511 ATAAATCTGGTTTGCATAGATTGATTG 57.023 29.630 13.37 0.00 40.12 2.67
84 85 7.414222 AATCTGGTTTGCATAGATTGATTGT 57.586 32.000 12.40 0.00 39.12 2.71
85 86 8.523915 AATCTGGTTTGCATAGATTGATTGTA 57.476 30.769 12.40 0.00 39.12 2.41
86 87 8.701908 ATCTGGTTTGCATAGATTGATTGTAT 57.298 30.769 0.00 0.00 0.00 2.29
87 88 9.797642 ATCTGGTTTGCATAGATTGATTGTATA 57.202 29.630 0.00 0.00 0.00 1.47
88 89 9.797642 TCTGGTTTGCATAGATTGATTGTATAT 57.202 29.630 0.00 0.00 0.00 0.86
134 135 6.552445 AGTACTGGACTTGATTGCTAATCT 57.448 37.500 0.00 0.00 38.72 2.40
135 136 6.951971 AGTACTGGACTTGATTGCTAATCTT 58.048 36.000 0.00 0.00 38.72 2.40
136 137 6.820656 AGTACTGGACTTGATTGCTAATCTTG 59.179 38.462 0.00 5.76 38.72 3.02
137 138 5.809001 ACTGGACTTGATTGCTAATCTTGA 58.191 37.500 9.34 0.00 38.72 3.02
138 139 6.240894 ACTGGACTTGATTGCTAATCTTGAA 58.759 36.000 9.34 0.00 38.72 2.69
139 140 6.716628 ACTGGACTTGATTGCTAATCTTGAAA 59.283 34.615 9.34 0.00 38.72 2.69
140 141 7.395489 ACTGGACTTGATTGCTAATCTTGAAAT 59.605 33.333 9.34 0.00 38.72 2.17
141 142 8.125978 TGGACTTGATTGCTAATCTTGAAATT 57.874 30.769 9.34 0.00 38.72 1.82
142 143 8.587608 TGGACTTGATTGCTAATCTTGAAATTT 58.412 29.630 0.00 0.00 38.72 1.82
143 144 9.080915 GGACTTGATTGCTAATCTTGAAATTTC 57.919 33.333 11.41 11.41 38.72 2.17
144 145 9.852091 GACTTGATTGCTAATCTTGAAATTTCT 57.148 29.630 18.64 1.17 38.72 2.52
150 151 9.985730 ATTGCTAATCTTGAAATTTCTTCAACA 57.014 25.926 18.64 5.03 34.96 3.33
151 152 8.801715 TGCTAATCTTGAAATTTCTTCAACAC 57.198 30.769 18.64 4.03 34.96 3.32
152 153 8.412456 TGCTAATCTTGAAATTTCTTCAACACA 58.588 29.630 18.64 6.32 34.96 3.72
153 154 8.909671 GCTAATCTTGAAATTTCTTCAACACAG 58.090 33.333 18.64 7.92 34.96 3.66
157 158 8.861033 TCTTGAAATTTCTTCAACACAGATTG 57.139 30.769 18.64 0.00 34.96 2.67
158 159 7.436080 TCTTGAAATTTCTTCAACACAGATTGC 59.564 33.333 18.64 0.00 34.96 3.56
159 160 6.808829 TGAAATTTCTTCAACACAGATTGCT 58.191 32.000 18.64 0.00 0.00 3.91
160 161 6.919662 TGAAATTTCTTCAACACAGATTGCTC 59.080 34.615 18.64 0.00 0.00 4.26
161 162 4.472691 TTTCTTCAACACAGATTGCTCG 57.527 40.909 0.00 0.00 0.00 5.03
162 163 1.800586 TCTTCAACACAGATTGCTCGC 59.199 47.619 0.00 0.00 0.00 5.03
163 164 0.512518 TTCAACACAGATTGCTCGCG 59.487 50.000 0.00 0.00 0.00 5.87
164 165 0.319469 TCAACACAGATTGCTCGCGA 60.319 50.000 9.26 9.26 0.00 5.87
165 166 0.094216 CAACACAGATTGCTCGCGAG 59.906 55.000 31.37 31.37 0.00 5.03
179 180 4.441695 CGAGCTGCGCTTGAGGGA 62.442 66.667 9.73 0.00 42.27 4.20
180 181 2.188994 GAGCTGCGCTTGAGGGAT 59.811 61.111 9.73 0.00 39.88 3.85
181 182 1.443407 GAGCTGCGCTTGAGGGATA 59.557 57.895 9.73 0.00 39.88 2.59
182 183 0.034616 GAGCTGCGCTTGAGGGATAT 59.965 55.000 9.73 0.00 39.88 1.63
183 184 0.471617 AGCTGCGCTTGAGGGATATT 59.528 50.000 9.73 0.00 33.89 1.28
184 185 0.590195 GCTGCGCTTGAGGGATATTG 59.410 55.000 9.73 0.00 0.00 1.90
185 186 1.233019 CTGCGCTTGAGGGATATTGG 58.767 55.000 9.73 0.00 0.00 3.16
186 187 0.546122 TGCGCTTGAGGGATATTGGT 59.454 50.000 9.73 0.00 0.00 3.67
187 188 0.947244 GCGCTTGAGGGATATTGGTG 59.053 55.000 0.00 0.00 0.00 4.17
188 189 1.597742 CGCTTGAGGGATATTGGTGG 58.402 55.000 0.00 0.00 0.00 4.61
189 190 1.322442 GCTTGAGGGATATTGGTGGC 58.678 55.000 0.00 0.00 0.00 5.01
190 191 1.410083 GCTTGAGGGATATTGGTGGCA 60.410 52.381 0.00 0.00 0.00 4.92
191 192 2.754186 GCTTGAGGGATATTGGTGGCAT 60.754 50.000 0.00 0.00 0.00 4.40
192 193 2.957402 TGAGGGATATTGGTGGCATC 57.043 50.000 0.00 0.00 0.00 3.91
193 194 2.134354 TGAGGGATATTGGTGGCATCA 58.866 47.619 0.00 0.00 0.00 3.07
194 195 2.718062 TGAGGGATATTGGTGGCATCAT 59.282 45.455 0.00 0.00 0.00 2.45
195 196 3.140707 TGAGGGATATTGGTGGCATCATT 59.859 43.478 0.00 0.00 0.00 2.57
196 197 3.503365 AGGGATATTGGTGGCATCATTG 58.497 45.455 0.00 0.00 0.00 2.82
197 198 3.117016 AGGGATATTGGTGGCATCATTGT 60.117 43.478 0.00 0.00 0.00 2.71
198 199 3.642848 GGGATATTGGTGGCATCATTGTT 59.357 43.478 0.00 0.00 0.00 2.83
199 200 4.501915 GGGATATTGGTGGCATCATTGTTG 60.502 45.833 0.00 0.00 0.00 3.33
200 201 4.099881 GGATATTGGTGGCATCATTGTTGT 59.900 41.667 0.00 0.00 0.00 3.32
201 202 5.395546 GGATATTGGTGGCATCATTGTTGTT 60.396 40.000 0.00 0.00 0.00 2.83
202 203 2.816204 TGGTGGCATCATTGTTGTTG 57.184 45.000 0.00 0.00 0.00 3.33
203 204 2.314246 TGGTGGCATCATTGTTGTTGA 58.686 42.857 0.00 0.00 0.00 3.18
204 205 2.898612 TGGTGGCATCATTGTTGTTGAT 59.101 40.909 0.00 0.00 34.15 2.57
205 206 3.324268 TGGTGGCATCATTGTTGTTGATT 59.676 39.130 0.00 0.00 31.50 2.57
206 207 4.202336 TGGTGGCATCATTGTTGTTGATTT 60.202 37.500 0.00 0.00 31.50 2.17
207 208 4.756135 GGTGGCATCATTGTTGTTGATTTT 59.244 37.500 0.00 0.00 31.50 1.82
208 209 5.931146 GGTGGCATCATTGTTGTTGATTTTA 59.069 36.000 0.00 0.00 31.50 1.52
209 210 6.594937 GGTGGCATCATTGTTGTTGATTTTAT 59.405 34.615 0.00 0.00 31.50 1.40
210 211 7.201548 GGTGGCATCATTGTTGTTGATTTTATC 60.202 37.037 0.00 0.00 31.50 1.75
211 212 6.530887 TGGCATCATTGTTGTTGATTTTATCG 59.469 34.615 0.00 0.00 31.50 2.92
212 213 6.751425 GGCATCATTGTTGTTGATTTTATCGA 59.249 34.615 0.00 0.00 31.50 3.59
213 214 7.253750 GGCATCATTGTTGTTGATTTTATCGAC 60.254 37.037 0.00 0.00 42.78 4.20
220 221 5.463499 TGTTGATTTTATCGACATGACGG 57.537 39.130 17.11 0.00 46.11 4.79
221 222 5.172205 TGTTGATTTTATCGACATGACGGA 58.828 37.500 17.11 5.13 46.11 4.69
222 223 5.062934 TGTTGATTTTATCGACATGACGGAC 59.937 40.000 17.11 4.19 46.11 4.79
223 224 3.794564 TGATTTTATCGACATGACGGACG 59.205 43.478 17.11 6.27 0.00 4.79
224 225 3.490800 TTTTATCGACATGACGGACGA 57.509 42.857 17.11 10.88 39.01 4.20
225 226 3.703286 TTTATCGACATGACGGACGAT 57.297 42.857 17.11 16.04 45.21 3.73
226 227 3.703286 TTATCGACATGACGGACGATT 57.297 42.857 17.11 0.00 43.47 3.34
227 228 1.840181 ATCGACATGACGGACGATTG 58.160 50.000 17.11 0.00 41.57 2.67
228 229 0.524414 TCGACATGACGGACGATTGT 59.476 50.000 17.11 0.00 0.00 2.71
229 230 1.738908 TCGACATGACGGACGATTGTA 59.261 47.619 17.11 0.00 0.00 2.41
230 231 2.162008 TCGACATGACGGACGATTGTAA 59.838 45.455 17.11 0.00 0.00 2.41
231 232 2.530297 CGACATGACGGACGATTGTAAG 59.470 50.000 9.78 0.00 0.00 2.34
232 233 3.729762 CGACATGACGGACGATTGTAAGA 60.730 47.826 9.78 0.00 0.00 2.10
233 234 4.360563 GACATGACGGACGATTGTAAGAT 58.639 43.478 0.00 0.00 0.00 2.40
234 235 5.509716 ACATGACGGACGATTGTAAGATA 57.490 39.130 0.00 0.00 0.00 1.98
235 236 6.085555 ACATGACGGACGATTGTAAGATAT 57.914 37.500 0.00 0.00 0.00 1.63
236 237 7.210718 ACATGACGGACGATTGTAAGATATA 57.789 36.000 0.00 0.00 0.00 0.86
237 238 7.306213 ACATGACGGACGATTGTAAGATATAG 58.694 38.462 0.00 0.00 0.00 1.31
238 239 5.696822 TGACGGACGATTGTAAGATATAGC 58.303 41.667 0.00 0.00 0.00 2.97
239 240 5.472478 TGACGGACGATTGTAAGATATAGCT 59.528 40.000 0.00 0.00 0.00 3.32
240 241 6.016527 TGACGGACGATTGTAAGATATAGCTT 60.017 38.462 8.52 8.52 0.00 3.74
241 242 6.380190 ACGGACGATTGTAAGATATAGCTTC 58.620 40.000 6.50 0.29 0.00 3.86
242 243 5.508573 CGGACGATTGTAAGATATAGCTTCG 59.491 44.000 6.50 6.99 0.00 3.79
243 244 6.609533 GGACGATTGTAAGATATAGCTTCGA 58.390 40.000 14.11 4.82 0.00 3.71
244 245 6.523893 GGACGATTGTAAGATATAGCTTCGAC 59.476 42.308 14.11 8.83 0.00 4.20
245 246 7.204496 ACGATTGTAAGATATAGCTTCGACT 57.796 36.000 14.11 0.00 0.00 4.18
246 247 7.299586 ACGATTGTAAGATATAGCTTCGACTC 58.700 38.462 14.11 5.12 0.00 3.36
247 248 7.173562 ACGATTGTAAGATATAGCTTCGACTCT 59.826 37.037 14.11 0.00 0.00 3.24
248 249 7.480229 CGATTGTAAGATATAGCTTCGACTCTG 59.520 40.741 6.50 0.00 0.00 3.35
249 250 6.561737 TGTAAGATATAGCTTCGACTCTGG 57.438 41.667 6.50 0.00 0.00 3.86
250 251 6.062749 TGTAAGATATAGCTTCGACTCTGGT 58.937 40.000 6.50 0.00 0.00 4.00
251 252 7.222161 TGTAAGATATAGCTTCGACTCTGGTA 58.778 38.462 6.50 0.00 0.00 3.25
252 253 6.811253 AAGATATAGCTTCGACTCTGGTAG 57.189 41.667 0.00 0.00 0.00 3.18
253 254 6.116711 AGATATAGCTTCGACTCTGGTAGA 57.883 41.667 0.00 0.00 0.00 2.59
254 255 6.535540 AGATATAGCTTCGACTCTGGTAGAA 58.464 40.000 0.00 0.00 36.11 2.10
255 256 4.904253 ATAGCTTCGACTCTGGTAGAAC 57.096 45.455 0.00 0.00 34.37 3.01
256 257 2.797786 AGCTTCGACTCTGGTAGAACT 58.202 47.619 0.00 0.00 34.37 3.01
257 258 3.952931 AGCTTCGACTCTGGTAGAACTA 58.047 45.455 0.00 0.00 34.37 2.24
258 259 4.333690 AGCTTCGACTCTGGTAGAACTAA 58.666 43.478 0.00 0.00 34.37 2.24
259 260 4.951094 AGCTTCGACTCTGGTAGAACTAAT 59.049 41.667 0.00 0.00 34.37 1.73
260 261 6.120905 AGCTTCGACTCTGGTAGAACTAATA 58.879 40.000 0.00 0.00 34.37 0.98
261 262 6.602406 AGCTTCGACTCTGGTAGAACTAATAA 59.398 38.462 0.00 0.00 34.37 1.40
262 263 7.285858 AGCTTCGACTCTGGTAGAACTAATAAT 59.714 37.037 0.00 0.00 34.37 1.28
263 264 7.380065 GCTTCGACTCTGGTAGAACTAATAATG 59.620 40.741 0.00 0.00 34.37 1.90
264 265 7.876936 TCGACTCTGGTAGAACTAATAATGT 57.123 36.000 0.00 0.00 0.00 2.71
265 266 7.928103 TCGACTCTGGTAGAACTAATAATGTC 58.072 38.462 0.00 0.00 0.00 3.06
266 267 7.555195 TCGACTCTGGTAGAACTAATAATGTCA 59.445 37.037 0.00 0.00 0.00 3.58
267 268 8.353684 CGACTCTGGTAGAACTAATAATGTCAT 58.646 37.037 0.00 0.00 0.00 3.06
268 269 9.469807 GACTCTGGTAGAACTAATAATGTCATG 57.530 37.037 0.00 0.00 0.00 3.07
269 270 8.982723 ACTCTGGTAGAACTAATAATGTCATGT 58.017 33.333 0.00 0.00 0.00 3.21
282 283 8.476064 AATAATGTCATGTAAATGCATACCCA 57.524 30.769 0.00 0.00 0.00 4.51
283 284 6.395426 AATGTCATGTAAATGCATACCCAG 57.605 37.500 0.00 0.00 0.00 4.45
284 285 4.206375 TGTCATGTAAATGCATACCCAGG 58.794 43.478 0.00 0.00 0.00 4.45
285 286 4.080072 TGTCATGTAAATGCATACCCAGGA 60.080 41.667 0.00 0.97 0.00 3.86
286 287 5.072741 GTCATGTAAATGCATACCCAGGAT 58.927 41.667 0.00 0.00 0.00 3.24
287 288 5.536161 GTCATGTAAATGCATACCCAGGATT 59.464 40.000 0.00 0.00 0.00 3.01
288 289 5.535783 TCATGTAAATGCATACCCAGGATTG 59.464 40.000 0.00 0.00 0.00 2.67
289 290 4.865905 TGTAAATGCATACCCAGGATTGT 58.134 39.130 0.00 0.00 0.00 2.71
290 291 4.644234 TGTAAATGCATACCCAGGATTGTG 59.356 41.667 0.00 0.00 0.00 3.33
291 292 1.696063 ATGCATACCCAGGATTGTGC 58.304 50.000 0.00 3.55 0.00 4.57
292 293 0.330941 TGCATACCCAGGATTGTGCA 59.669 50.000 7.99 7.99 39.94 4.57
293 294 1.063792 TGCATACCCAGGATTGTGCAT 60.064 47.619 7.99 0.00 37.63 3.96
294 295 2.034124 GCATACCCAGGATTGTGCATT 58.966 47.619 0.00 0.00 33.09 3.56
295 296 2.431782 GCATACCCAGGATTGTGCATTT 59.568 45.455 0.00 0.00 33.09 2.32
296 297 3.738899 GCATACCCAGGATTGTGCATTTG 60.739 47.826 0.00 0.00 33.09 2.32
297 298 2.014010 ACCCAGGATTGTGCATTTGT 57.986 45.000 0.00 0.00 0.00 2.83
298 299 2.328319 ACCCAGGATTGTGCATTTGTT 58.672 42.857 0.00 0.00 0.00 2.83
299 300 2.705127 ACCCAGGATTGTGCATTTGTTT 59.295 40.909 0.00 0.00 0.00 2.83
300 301 3.136260 ACCCAGGATTGTGCATTTGTTTT 59.864 39.130 0.00 0.00 0.00 2.43
301 302 4.346418 ACCCAGGATTGTGCATTTGTTTTA 59.654 37.500 0.00 0.00 0.00 1.52
302 303 4.690280 CCCAGGATTGTGCATTTGTTTTAC 59.310 41.667 0.00 0.00 0.00 2.01
303 304 5.295950 CCAGGATTGTGCATTTGTTTTACA 58.704 37.500 0.00 0.00 0.00 2.41
304 305 5.933463 CCAGGATTGTGCATTTGTTTTACAT 59.067 36.000 0.00 0.00 0.00 2.29
305 306 7.095910 CCAGGATTGTGCATTTGTTTTACATA 58.904 34.615 0.00 0.00 0.00 2.29
306 307 7.765360 CCAGGATTGTGCATTTGTTTTACATAT 59.235 33.333 0.00 0.00 0.00 1.78
307 308 9.153721 CAGGATTGTGCATTTGTTTTACATATT 57.846 29.630 0.00 0.00 0.00 1.28
308 309 9.369904 AGGATTGTGCATTTGTTTTACATATTC 57.630 29.630 0.00 0.00 0.00 1.75
309 310 9.369904 GGATTGTGCATTTGTTTTACATATTCT 57.630 29.630 0.00 0.00 0.00 2.40
311 312 9.926158 ATTGTGCATTTGTTTTACATATTCTCA 57.074 25.926 0.00 0.00 0.00 3.27
312 313 8.741101 TGTGCATTTGTTTTACATATTCTCAC 57.259 30.769 0.00 0.00 0.00 3.51
313 314 8.575589 TGTGCATTTGTTTTACATATTCTCACT 58.424 29.630 0.00 0.00 0.00 3.41
333 334 9.462174 TCTCACTAAACTTGCATTTATGTTTTG 57.538 29.630 0.00 0.00 34.88 2.44
334 335 8.071122 TCACTAAACTTGCATTTATGTTTTGC 57.929 30.769 0.00 0.00 34.88 3.68
335 336 7.925483 TCACTAAACTTGCATTTATGTTTTGCT 59.075 29.630 0.00 0.00 37.28 3.91
336 337 8.550376 CACTAAACTTGCATTTATGTTTTGCTT 58.450 29.630 0.00 0.00 37.28 3.91
476 480 3.311322 CACACACAGAAAAGGCTAACGAA 59.689 43.478 0.00 0.00 0.00 3.85
569 586 3.584052 CGACGGCGGACCTAGGAG 61.584 72.222 17.98 7.54 0.00 3.69
672 689 3.767806 CTCTCGCAGCTGCAGGGA 61.768 66.667 36.03 29.64 42.21 4.20
1668 1701 2.422093 CCAACCTCTCCTGCCCTTTATC 60.422 54.545 0.00 0.00 0.00 1.75
2888 2923 1.200948 GAATCAGTTTCAGGTGCAGGC 59.799 52.381 0.00 0.00 34.27 4.85
2987 3022 3.003394 TCATCAAACTACATGCCCAGG 57.997 47.619 0.00 0.00 0.00 4.45
3027 3062 3.486383 AGTGGCAGAAAGGAAAAATCGA 58.514 40.909 0.00 0.00 0.00 3.59
3123 3158 4.256110 TGACAGCCACATACTTGATCAAG 58.744 43.478 29.74 29.74 43.79 3.02
3124 3159 4.020307 TGACAGCCACATACTTGATCAAGA 60.020 41.667 36.15 21.97 40.79 3.02
3125 3160 4.910195 ACAGCCACATACTTGATCAAGAA 58.090 39.130 36.15 3.79 40.79 2.52
3126 3161 5.503927 ACAGCCACATACTTGATCAAGAAT 58.496 37.500 36.15 20.46 40.79 2.40
3127 3162 6.653020 ACAGCCACATACTTGATCAAGAATA 58.347 36.000 36.15 21.80 40.79 1.75
3128 3163 6.540189 ACAGCCACATACTTGATCAAGAATAC 59.460 38.462 36.15 19.57 40.79 1.89
3129 3164 6.765036 CAGCCACATACTTGATCAAGAATACT 59.235 38.462 36.15 21.10 40.79 2.12
3130 3165 7.281774 CAGCCACATACTTGATCAAGAATACTT 59.718 37.037 36.15 18.46 40.79 2.24
3152 3187 8.237811 ACTTGTTTTGATGAAGAATACCTTGT 57.762 30.769 0.00 0.00 34.68 3.16
3153 3188 8.695456 ACTTGTTTTGATGAAGAATACCTTGTT 58.305 29.630 0.00 0.00 34.68 2.83
3154 3189 9.533253 CTTGTTTTGATGAAGAATACCTTGTTT 57.467 29.630 0.00 0.00 34.68 2.83
3155 3190 9.883142 TTGTTTTGATGAAGAATACCTTGTTTT 57.117 25.926 0.00 0.00 34.68 2.43
3156 3191 9.311916 TGTTTTGATGAAGAATACCTTGTTTTG 57.688 29.630 0.00 0.00 34.68 2.44
3157 3192 9.528018 GTTTTGATGAAGAATACCTTGTTTTGA 57.472 29.630 0.00 0.00 34.68 2.69
3159 3194 9.695526 TTTGATGAAGAATACCTTGTTTTGATG 57.304 29.630 0.00 0.00 34.68 3.07
3160 3195 8.634335 TGATGAAGAATACCTTGTTTTGATGA 57.366 30.769 0.00 0.00 34.68 2.92
3161 3196 9.076781 TGATGAAGAATACCTTGTTTTGATGAA 57.923 29.630 0.00 0.00 34.68 2.57
3162 3197 9.565213 GATGAAGAATACCTTGTTTTGATGAAG 57.435 33.333 0.00 0.00 34.68 3.02
3163 3198 7.370383 TGAAGAATACCTTGTTTTGATGAAGC 58.630 34.615 0.00 0.00 34.68 3.86
3164 3199 6.899393 AGAATACCTTGTTTTGATGAAGCA 57.101 33.333 0.00 0.00 0.00 3.91
3165 3200 6.917533 AGAATACCTTGTTTTGATGAAGCAG 58.082 36.000 0.00 0.00 29.82 4.24
3166 3201 6.491403 AGAATACCTTGTTTTGATGAAGCAGT 59.509 34.615 0.00 0.00 29.82 4.40
3167 3202 6.655078 ATACCTTGTTTTGATGAAGCAGTT 57.345 33.333 0.00 0.00 29.82 3.16
3168 3203 7.759489 ATACCTTGTTTTGATGAAGCAGTTA 57.241 32.000 0.00 0.00 29.82 2.24
3169 3204 6.655078 ACCTTGTTTTGATGAAGCAGTTAT 57.345 33.333 0.00 0.00 29.82 1.89
3170 3205 6.449698 ACCTTGTTTTGATGAAGCAGTTATG 58.550 36.000 0.00 0.00 29.82 1.90
3171 3206 6.265196 ACCTTGTTTTGATGAAGCAGTTATGA 59.735 34.615 0.00 0.00 29.82 2.15
3172 3207 6.583806 CCTTGTTTTGATGAAGCAGTTATGAC 59.416 38.462 0.00 0.00 29.82 3.06
3173 3208 6.631971 TGTTTTGATGAAGCAGTTATGACA 57.368 33.333 0.00 0.00 0.00 3.58
3174 3209 6.671190 TGTTTTGATGAAGCAGTTATGACAG 58.329 36.000 0.00 0.00 0.00 3.51
3175 3210 4.952262 TTGATGAAGCAGTTATGACAGC 57.048 40.909 0.00 0.00 38.45 4.40
3176 3211 3.273434 TGATGAAGCAGTTATGACAGCC 58.727 45.455 1.19 0.00 38.92 4.85
3177 3212 2.857186 TGAAGCAGTTATGACAGCCA 57.143 45.000 1.19 0.00 38.92 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.349528 GGTTACACAAAACACAAGTACCAGTT 60.350 38.462 0.00 0.00 0.00 3.16
1 2 5.124297 GGTTACACAAAACACAAGTACCAGT 59.876 40.000 0.00 0.00 0.00 4.00
2 3 5.124138 TGGTTACACAAAACACAAGTACCAG 59.876 40.000 0.00 0.00 26.65 4.00
3 4 5.008331 TGGTTACACAAAACACAAGTACCA 58.992 37.500 0.00 0.00 26.65 3.25
4 5 5.564048 TGGTTACACAAAACACAAGTACC 57.436 39.130 0.00 0.00 26.65 3.34
5 6 5.032220 GCTGGTTACACAAAACACAAGTAC 58.968 41.667 0.00 0.00 29.59 2.73
6 7 4.700692 TGCTGGTTACACAAAACACAAGTA 59.299 37.500 0.00 0.00 29.59 2.24
7 8 3.508012 TGCTGGTTACACAAAACACAAGT 59.492 39.130 0.00 0.00 29.59 3.16
8 9 4.103365 TGCTGGTTACACAAAACACAAG 57.897 40.909 0.00 0.00 29.59 3.16
9 10 4.238514 GTTGCTGGTTACACAAAACACAA 58.761 39.130 0.00 0.00 29.59 3.33
10 11 3.367498 GGTTGCTGGTTACACAAAACACA 60.367 43.478 0.00 0.00 29.59 3.72
11 12 3.183754 GGTTGCTGGTTACACAAAACAC 58.816 45.455 0.00 0.00 29.59 3.32
12 13 2.826128 TGGTTGCTGGTTACACAAAACA 59.174 40.909 0.00 0.00 32.53 2.83
13 14 3.512033 TGGTTGCTGGTTACACAAAAC 57.488 42.857 0.00 0.00 0.00 2.43
14 15 4.645136 TGTATGGTTGCTGGTTACACAAAA 59.355 37.500 0.00 0.00 0.00 2.44
15 16 4.036971 GTGTATGGTTGCTGGTTACACAAA 59.963 41.667 6.64 0.00 41.29 2.83
16 17 3.566322 GTGTATGGTTGCTGGTTACACAA 59.434 43.478 6.64 0.00 41.29 3.33
17 18 3.142951 GTGTATGGTTGCTGGTTACACA 58.857 45.455 6.64 0.00 41.29 3.72
18 19 3.058501 GTGTGTATGGTTGCTGGTTACAC 60.059 47.826 0.00 0.00 41.76 2.90
19 20 3.142951 GTGTGTATGGTTGCTGGTTACA 58.857 45.455 0.00 0.00 0.00 2.41
20 21 2.158841 CGTGTGTATGGTTGCTGGTTAC 59.841 50.000 0.00 0.00 0.00 2.50
21 22 2.418692 CGTGTGTATGGTTGCTGGTTA 58.581 47.619 0.00 0.00 0.00 2.85
22 23 1.234821 CGTGTGTATGGTTGCTGGTT 58.765 50.000 0.00 0.00 0.00 3.67
23 24 1.234615 GCGTGTGTATGGTTGCTGGT 61.235 55.000 0.00 0.00 0.00 4.00
24 25 0.955428 AGCGTGTGTATGGTTGCTGG 60.955 55.000 0.00 0.00 0.00 4.85
25 26 1.720805 TAGCGTGTGTATGGTTGCTG 58.279 50.000 0.00 0.00 34.08 4.41
26 27 2.279741 CATAGCGTGTGTATGGTTGCT 58.720 47.619 0.00 0.00 36.51 3.91
27 28 1.330521 CCATAGCGTGTGTATGGTTGC 59.669 52.381 1.62 0.00 41.45 4.17
28 29 2.866156 CTCCATAGCGTGTGTATGGTTG 59.134 50.000 8.38 1.48 45.10 3.77
29 30 2.741878 GCTCCATAGCGTGTGTATGGTT 60.742 50.000 8.38 0.00 45.10 3.67
30 31 1.202533 GCTCCATAGCGTGTGTATGGT 60.203 52.381 8.38 0.00 45.10 3.55
31 32 1.502231 GCTCCATAGCGTGTGTATGG 58.498 55.000 3.13 3.13 45.89 2.74
42 43 9.512588 AACCAGATTTATTATCTTGCTCCATAG 57.487 33.333 0.00 0.00 0.00 2.23
43 44 9.866655 AAACCAGATTTATTATCTTGCTCCATA 57.133 29.630 0.00 0.00 0.00 2.74
44 45 8.636213 CAAACCAGATTTATTATCTTGCTCCAT 58.364 33.333 0.00 0.00 0.00 3.41
45 46 7.416664 GCAAACCAGATTTATTATCTTGCTCCA 60.417 37.037 0.00 0.00 30.00 3.86
46 47 6.920210 GCAAACCAGATTTATTATCTTGCTCC 59.080 38.462 0.00 0.00 30.00 4.70
47 48 7.483307 TGCAAACCAGATTTATTATCTTGCTC 58.517 34.615 0.00 0.00 32.41 4.26
48 49 7.408756 TGCAAACCAGATTTATTATCTTGCT 57.591 32.000 0.00 0.00 32.41 3.91
49 50 9.403110 CTATGCAAACCAGATTTATTATCTTGC 57.597 33.333 0.00 0.00 32.04 4.01
57 58 9.976511 CAATCAATCTATGCAAACCAGATTTAT 57.023 29.630 11.39 8.20 37.00 1.40
58 59 8.970020 ACAATCAATCTATGCAAACCAGATTTA 58.030 29.630 11.39 6.72 37.00 1.40
59 60 7.844009 ACAATCAATCTATGCAAACCAGATTT 58.156 30.769 11.39 0.38 37.00 2.17
60 61 7.414222 ACAATCAATCTATGCAAACCAGATT 57.586 32.000 9.26 9.26 39.10 2.40
61 62 8.701908 ATACAATCAATCTATGCAAACCAGAT 57.298 30.769 0.00 0.00 0.00 2.90
62 63 9.797642 ATATACAATCAATCTATGCAAACCAGA 57.202 29.630 0.00 0.00 0.00 3.86
97 98 9.667107 CAAGTCCAGTACTTTAATAATCTTCCA 57.333 33.333 0.00 0.00 46.61 3.53
98 99 9.886132 TCAAGTCCAGTACTTTAATAATCTTCC 57.114 33.333 0.00 0.00 46.61 3.46
102 103 9.937175 GCAATCAAGTCCAGTACTTTAATAATC 57.063 33.333 0.00 0.00 46.61 1.75
103 104 9.686683 AGCAATCAAGTCCAGTACTTTAATAAT 57.313 29.630 0.00 0.00 46.61 1.28
106 107 9.686683 ATTAGCAATCAAGTCCAGTACTTTAAT 57.313 29.630 0.00 0.00 46.61 1.40
107 108 9.162764 GATTAGCAATCAAGTCCAGTACTTTAA 57.837 33.333 0.00 0.00 46.61 1.52
108 109 8.718102 GATTAGCAATCAAGTCCAGTACTTTA 57.282 34.615 0.00 0.00 46.61 1.85
109 110 7.617041 GATTAGCAATCAAGTCCAGTACTTT 57.383 36.000 0.00 0.00 46.61 2.66
111 112 6.552445 AGATTAGCAATCAAGTCCAGTACT 57.448 37.500 10.26 0.00 40.42 2.73
112 113 6.818644 TCAAGATTAGCAATCAAGTCCAGTAC 59.181 38.462 10.26 0.00 40.42 2.73
113 114 6.946340 TCAAGATTAGCAATCAAGTCCAGTA 58.054 36.000 10.26 0.00 40.42 2.74
114 115 5.809001 TCAAGATTAGCAATCAAGTCCAGT 58.191 37.500 10.26 0.00 40.42 4.00
115 116 6.748333 TTCAAGATTAGCAATCAAGTCCAG 57.252 37.500 10.26 0.00 40.42 3.86
116 117 7.707624 ATTTCAAGATTAGCAATCAAGTCCA 57.292 32.000 10.26 0.00 40.42 4.02
117 118 8.992835 AAATTTCAAGATTAGCAATCAAGTCC 57.007 30.769 10.26 0.00 40.42 3.85
118 119 9.852091 AGAAATTTCAAGATTAGCAATCAAGTC 57.148 29.630 19.99 0.00 40.42 3.01
124 125 9.985730 TGTTGAAGAAATTTCAAGATTAGCAAT 57.014 25.926 19.99 0.00 38.88 3.56
125 126 9.248291 GTGTTGAAGAAATTTCAAGATTAGCAA 57.752 29.630 19.99 8.77 38.88 3.91
126 127 8.412456 TGTGTTGAAGAAATTTCAAGATTAGCA 58.588 29.630 19.99 7.22 38.88 3.49
127 128 8.801715 TGTGTTGAAGAAATTTCAAGATTAGC 57.198 30.769 19.99 4.94 38.88 3.09
131 132 9.472361 CAATCTGTGTTGAAGAAATTTCAAGAT 57.528 29.630 19.99 10.81 38.88 2.40
132 133 7.436080 GCAATCTGTGTTGAAGAAATTTCAAGA 59.564 33.333 19.99 2.70 38.88 3.02
133 134 7.437267 AGCAATCTGTGTTGAAGAAATTTCAAG 59.563 33.333 19.99 4.86 38.88 3.02
134 135 7.267128 AGCAATCTGTGTTGAAGAAATTTCAA 58.733 30.769 19.99 4.00 36.21 2.69
135 136 6.808829 AGCAATCTGTGTTGAAGAAATTTCA 58.191 32.000 19.99 0.00 0.00 2.69
136 137 6.087291 CGAGCAATCTGTGTTGAAGAAATTTC 59.913 38.462 10.33 10.33 0.00 2.17
137 138 5.916883 CGAGCAATCTGTGTTGAAGAAATTT 59.083 36.000 0.00 0.00 0.00 1.82
138 139 5.455392 CGAGCAATCTGTGTTGAAGAAATT 58.545 37.500 0.00 0.00 0.00 1.82
139 140 4.614535 GCGAGCAATCTGTGTTGAAGAAAT 60.615 41.667 0.00 0.00 0.00 2.17
140 141 3.303990 GCGAGCAATCTGTGTTGAAGAAA 60.304 43.478 0.00 0.00 0.00 2.52
141 142 2.224079 GCGAGCAATCTGTGTTGAAGAA 59.776 45.455 0.00 0.00 0.00 2.52
142 143 1.800586 GCGAGCAATCTGTGTTGAAGA 59.199 47.619 0.00 0.00 0.00 2.87
143 144 1.463034 CGCGAGCAATCTGTGTTGAAG 60.463 52.381 0.00 0.00 0.00 3.02
144 145 0.512518 CGCGAGCAATCTGTGTTGAA 59.487 50.000 0.00 0.00 0.00 2.69
145 146 0.319469 TCGCGAGCAATCTGTGTTGA 60.319 50.000 3.71 0.00 0.00 3.18
146 147 0.094216 CTCGCGAGCAATCTGTGTTG 59.906 55.000 25.07 0.00 0.00 3.33
147 148 2.449548 CTCGCGAGCAATCTGTGTT 58.550 52.632 25.07 0.00 0.00 3.32
148 149 4.175599 CTCGCGAGCAATCTGTGT 57.824 55.556 25.07 0.00 0.00 3.72
166 167 1.233019 CCAATATCCCTCAAGCGCAG 58.767 55.000 11.47 0.72 0.00 5.18
167 168 0.546122 ACCAATATCCCTCAAGCGCA 59.454 50.000 11.47 0.00 0.00 6.09
168 169 0.947244 CACCAATATCCCTCAAGCGC 59.053 55.000 0.00 0.00 0.00 5.92
169 170 1.597742 CCACCAATATCCCTCAAGCG 58.402 55.000 0.00 0.00 0.00 4.68
170 171 1.322442 GCCACCAATATCCCTCAAGC 58.678 55.000 0.00 0.00 0.00 4.01
171 172 2.734755 TGCCACCAATATCCCTCAAG 57.265 50.000 0.00 0.00 0.00 3.02
172 173 2.513317 TGATGCCACCAATATCCCTCAA 59.487 45.455 0.00 0.00 0.00 3.02
173 174 2.134354 TGATGCCACCAATATCCCTCA 58.866 47.619 0.00 0.00 0.00 3.86
174 175 2.957402 TGATGCCACCAATATCCCTC 57.043 50.000 0.00 0.00 0.00 4.30
175 176 3.117016 ACAATGATGCCACCAATATCCCT 60.117 43.478 0.00 0.00 0.00 4.20
176 177 3.233507 ACAATGATGCCACCAATATCCC 58.766 45.455 0.00 0.00 0.00 3.85
177 178 4.099881 ACAACAATGATGCCACCAATATCC 59.900 41.667 0.00 0.00 0.00 2.59
178 179 5.266733 ACAACAATGATGCCACCAATATC 57.733 39.130 0.00 0.00 0.00 1.63
179 180 5.187381 TCAACAACAATGATGCCACCAATAT 59.813 36.000 0.00 0.00 29.99 1.28
180 181 4.525874 TCAACAACAATGATGCCACCAATA 59.474 37.500 0.00 0.00 29.99 1.90
181 182 3.324268 TCAACAACAATGATGCCACCAAT 59.676 39.130 0.00 0.00 29.99 3.16
182 183 2.697229 TCAACAACAATGATGCCACCAA 59.303 40.909 0.00 0.00 29.99 3.67
183 184 2.314246 TCAACAACAATGATGCCACCA 58.686 42.857 0.00 0.00 29.99 4.17
184 185 3.598019 ATCAACAACAATGATGCCACC 57.402 42.857 0.00 0.00 36.21 4.61
185 186 5.927954 AAAATCAACAACAATGATGCCAC 57.072 34.783 0.00 0.00 37.58 5.01
186 187 6.530887 CGATAAAATCAACAACAATGATGCCA 59.469 34.615 0.00 0.00 37.58 4.92
187 188 6.751425 TCGATAAAATCAACAACAATGATGCC 59.249 34.615 0.00 0.00 37.58 4.40
188 189 7.273164 TGTCGATAAAATCAACAACAATGATGC 59.727 33.333 0.00 0.00 37.58 3.91
189 190 8.672214 TGTCGATAAAATCAACAACAATGATG 57.328 30.769 0.00 0.00 37.58 3.07
190 191 9.292846 CATGTCGATAAAATCAACAACAATGAT 57.707 29.630 0.00 0.00 39.15 2.45
191 192 8.510505 TCATGTCGATAAAATCAACAACAATGA 58.489 29.630 0.00 0.00 28.81 2.57
192 193 8.577939 GTCATGTCGATAAAATCAACAACAATG 58.422 33.333 0.00 0.00 28.81 2.82
193 194 7.481483 CGTCATGTCGATAAAATCAACAACAAT 59.519 33.333 6.49 0.00 28.81 2.71
194 195 6.794636 CGTCATGTCGATAAAATCAACAACAA 59.205 34.615 6.49 0.00 28.81 2.83
195 196 6.303370 CGTCATGTCGATAAAATCAACAACA 58.697 36.000 6.49 0.00 28.81 3.33
196 197 5.732647 CCGTCATGTCGATAAAATCAACAAC 59.267 40.000 14.01 0.00 28.81 3.32
197 198 5.639931 TCCGTCATGTCGATAAAATCAACAA 59.360 36.000 14.01 0.00 28.81 2.83
198 199 5.062934 GTCCGTCATGTCGATAAAATCAACA 59.937 40.000 14.01 0.00 29.68 3.33
199 200 5.490213 GTCCGTCATGTCGATAAAATCAAC 58.510 41.667 14.01 0.00 0.00 3.18
200 201 4.266739 CGTCCGTCATGTCGATAAAATCAA 59.733 41.667 14.01 0.00 0.00 2.57
201 202 3.794564 CGTCCGTCATGTCGATAAAATCA 59.205 43.478 14.01 0.00 0.00 2.57
202 203 4.039703 TCGTCCGTCATGTCGATAAAATC 58.960 43.478 14.01 0.00 0.00 2.17
203 204 4.036567 TCGTCCGTCATGTCGATAAAAT 57.963 40.909 14.01 0.00 0.00 1.82
204 205 3.490800 TCGTCCGTCATGTCGATAAAA 57.509 42.857 14.01 0.00 0.00 1.52
205 206 3.703286 ATCGTCCGTCATGTCGATAAA 57.297 42.857 14.01 0.00 40.43 1.40
206 207 3.181494 ACAATCGTCCGTCATGTCGATAA 60.181 43.478 14.01 0.00 41.17 1.75
207 208 2.356695 ACAATCGTCCGTCATGTCGATA 59.643 45.455 14.01 0.00 41.17 2.92
208 209 1.134367 ACAATCGTCCGTCATGTCGAT 59.866 47.619 14.01 9.54 43.30 3.59
209 210 0.524414 ACAATCGTCCGTCATGTCGA 59.476 50.000 14.01 7.80 36.77 4.20
210 211 2.182904 TACAATCGTCCGTCATGTCG 57.817 50.000 5.32 5.32 0.00 4.35
211 212 3.766151 TCTTACAATCGTCCGTCATGTC 58.234 45.455 0.00 0.00 0.00 3.06
212 213 3.861276 TCTTACAATCGTCCGTCATGT 57.139 42.857 0.00 0.00 0.00 3.21
213 214 6.251589 GCTATATCTTACAATCGTCCGTCATG 59.748 42.308 0.00 0.00 0.00 3.07
214 215 6.151312 AGCTATATCTTACAATCGTCCGTCAT 59.849 38.462 0.00 0.00 0.00 3.06
215 216 5.472478 AGCTATATCTTACAATCGTCCGTCA 59.528 40.000 0.00 0.00 0.00 4.35
216 217 5.940595 AGCTATATCTTACAATCGTCCGTC 58.059 41.667 0.00 0.00 0.00 4.79
217 218 5.961396 AGCTATATCTTACAATCGTCCGT 57.039 39.130 0.00 0.00 0.00 4.69
218 219 5.508573 CGAAGCTATATCTTACAATCGTCCG 59.491 44.000 0.00 0.00 0.00 4.79
219 220 6.523893 GTCGAAGCTATATCTTACAATCGTCC 59.476 42.308 0.00 0.00 0.00 4.79
220 221 7.299586 AGTCGAAGCTATATCTTACAATCGTC 58.700 38.462 0.00 0.00 0.00 4.20
221 222 7.173562 AGAGTCGAAGCTATATCTTACAATCGT 59.826 37.037 0.00 0.00 0.00 3.73
222 223 7.480229 CAGAGTCGAAGCTATATCTTACAATCG 59.520 40.741 0.00 0.00 0.00 3.34
223 224 7.753132 CCAGAGTCGAAGCTATATCTTACAATC 59.247 40.741 0.00 0.00 0.00 2.67
224 225 7.231722 ACCAGAGTCGAAGCTATATCTTACAAT 59.768 37.037 0.00 0.00 0.00 2.71
225 226 6.546403 ACCAGAGTCGAAGCTATATCTTACAA 59.454 38.462 0.00 0.00 0.00 2.41
226 227 6.062749 ACCAGAGTCGAAGCTATATCTTACA 58.937 40.000 0.00 0.00 0.00 2.41
227 228 6.563222 ACCAGAGTCGAAGCTATATCTTAC 57.437 41.667 0.00 0.00 0.00 2.34
228 229 7.677892 TCTACCAGAGTCGAAGCTATATCTTA 58.322 38.462 0.00 0.00 0.00 2.10
229 230 6.535540 TCTACCAGAGTCGAAGCTATATCTT 58.464 40.000 0.00 0.00 0.00 2.40
230 231 6.116711 TCTACCAGAGTCGAAGCTATATCT 57.883 41.667 0.00 0.00 0.00 1.98
231 232 6.428771 AGTTCTACCAGAGTCGAAGCTATATC 59.571 42.308 0.00 0.00 29.11 1.63
232 233 6.300703 AGTTCTACCAGAGTCGAAGCTATAT 58.699 40.000 0.00 0.00 29.11 0.86
233 234 5.682659 AGTTCTACCAGAGTCGAAGCTATA 58.317 41.667 0.00 0.00 29.11 1.31
234 235 4.528920 AGTTCTACCAGAGTCGAAGCTAT 58.471 43.478 0.00 0.00 29.11 2.97
235 236 3.952931 AGTTCTACCAGAGTCGAAGCTA 58.047 45.455 0.00 0.00 29.11 3.32
236 237 2.797786 AGTTCTACCAGAGTCGAAGCT 58.202 47.619 0.00 0.00 29.11 3.74
237 238 4.698583 TTAGTTCTACCAGAGTCGAAGC 57.301 45.455 0.00 0.00 29.11 3.86
238 239 8.407064 ACATTATTAGTTCTACCAGAGTCGAAG 58.593 37.037 0.00 0.00 29.11 3.79
239 240 8.289939 ACATTATTAGTTCTACCAGAGTCGAA 57.710 34.615 0.00 0.00 0.00 3.71
240 241 7.555195 TGACATTATTAGTTCTACCAGAGTCGA 59.445 37.037 0.00 0.00 0.00 4.20
241 242 7.704271 TGACATTATTAGTTCTACCAGAGTCG 58.296 38.462 0.00 0.00 0.00 4.18
242 243 9.469807 CATGACATTATTAGTTCTACCAGAGTC 57.530 37.037 0.00 0.00 0.00 3.36
243 244 8.982723 ACATGACATTATTAGTTCTACCAGAGT 58.017 33.333 0.00 0.00 0.00 3.24
256 257 9.579932 TGGGTATGCATTTACATGACATTATTA 57.420 29.630 3.54 0.00 32.63 0.98
257 258 8.476064 TGGGTATGCATTTACATGACATTATT 57.524 30.769 3.54 0.00 32.63 1.40
258 259 7.177216 CCTGGGTATGCATTTACATGACATTAT 59.823 37.037 3.54 0.00 32.63 1.28
259 260 6.489700 CCTGGGTATGCATTTACATGACATTA 59.510 38.462 3.54 0.00 32.63 1.90
260 261 5.302568 CCTGGGTATGCATTTACATGACATT 59.697 40.000 3.54 0.00 32.63 2.71
261 262 4.828939 CCTGGGTATGCATTTACATGACAT 59.171 41.667 3.54 0.00 33.97 3.06
262 263 4.080072 TCCTGGGTATGCATTTACATGACA 60.080 41.667 3.54 0.00 31.07 3.58
263 264 4.460263 TCCTGGGTATGCATTTACATGAC 58.540 43.478 3.54 0.00 31.07 3.06
264 265 4.787135 TCCTGGGTATGCATTTACATGA 57.213 40.909 3.54 1.48 31.07 3.07
265 266 5.302568 ACAATCCTGGGTATGCATTTACATG 59.697 40.000 3.54 0.00 0.00 3.21
266 267 5.302568 CACAATCCTGGGTATGCATTTACAT 59.697 40.000 3.54 0.00 0.00 2.29
267 268 4.644234 CACAATCCTGGGTATGCATTTACA 59.356 41.667 3.54 0.27 0.00 2.41
268 269 4.499696 GCACAATCCTGGGTATGCATTTAC 60.500 45.833 3.54 0.00 33.27 2.01
269 270 3.636300 GCACAATCCTGGGTATGCATTTA 59.364 43.478 3.54 0.00 33.27 1.40
270 271 2.431782 GCACAATCCTGGGTATGCATTT 59.568 45.455 3.54 0.00 33.27 2.32
271 272 2.034124 GCACAATCCTGGGTATGCATT 58.966 47.619 3.54 0.00 33.27 3.56
272 273 1.063792 TGCACAATCCTGGGTATGCAT 60.064 47.619 13.29 3.79 38.11 3.96
273 274 0.330941 TGCACAATCCTGGGTATGCA 59.669 50.000 13.29 13.29 40.57 3.96
274 275 1.696063 ATGCACAATCCTGGGTATGC 58.304 50.000 8.76 8.76 28.93 3.14
275 276 3.448301 ACAAATGCACAATCCTGGGTATG 59.552 43.478 0.00 0.00 30.78 2.39
276 277 3.711863 ACAAATGCACAATCCTGGGTAT 58.288 40.909 0.00 0.00 31.78 2.73
277 278 3.168035 ACAAATGCACAATCCTGGGTA 57.832 42.857 0.00 0.00 0.00 3.69
278 279 2.014010 ACAAATGCACAATCCTGGGT 57.986 45.000 0.00 0.00 0.00 4.51
279 280 3.405823 AAACAAATGCACAATCCTGGG 57.594 42.857 0.00 0.00 0.00 4.45
280 281 5.295950 TGTAAAACAAATGCACAATCCTGG 58.704 37.500 0.00 0.00 0.00 4.45
281 282 8.706492 ATATGTAAAACAAATGCACAATCCTG 57.294 30.769 0.00 0.00 0.00 3.86
282 283 9.369904 GAATATGTAAAACAAATGCACAATCCT 57.630 29.630 0.00 0.00 0.00 3.24
283 284 9.369904 AGAATATGTAAAACAAATGCACAATCC 57.630 29.630 0.00 0.00 0.00 3.01
285 286 9.926158 TGAGAATATGTAAAACAAATGCACAAT 57.074 25.926 0.00 0.00 0.00 2.71
286 287 9.190858 GTGAGAATATGTAAAACAAATGCACAA 57.809 29.630 0.00 0.00 0.00 3.33
287 288 8.575589 AGTGAGAATATGTAAAACAAATGCACA 58.424 29.630 0.00 0.00 0.00 4.57
288 289 8.970691 AGTGAGAATATGTAAAACAAATGCAC 57.029 30.769 0.00 0.00 0.00 4.57
307 308 9.462174 CAAAACATAAATGCAAGTTTAGTGAGA 57.538 29.630 0.00 0.00 33.45 3.27
308 309 8.216453 GCAAAACATAAATGCAAGTTTAGTGAG 58.784 33.333 0.00 0.00 39.81 3.51
309 310 7.925483 AGCAAAACATAAATGCAAGTTTAGTGA 59.075 29.630 0.00 0.00 42.45 3.41
310 311 8.075593 AGCAAAACATAAATGCAAGTTTAGTG 57.924 30.769 0.00 0.00 42.45 2.74
311 312 8.661352 AAGCAAAACATAAATGCAAGTTTAGT 57.339 26.923 0.00 0.00 42.45 2.24
314 315 9.881529 CATAAAGCAAAACATAAATGCAAGTTT 57.118 25.926 0.00 0.00 42.45 2.66
315 316 9.054922 ACATAAAGCAAAACATAAATGCAAGTT 57.945 25.926 0.00 0.00 42.45 2.66
316 317 8.606040 ACATAAAGCAAAACATAAATGCAAGT 57.394 26.923 0.00 0.00 42.45 3.16
317 318 9.320406 CAACATAAAGCAAAACATAAATGCAAG 57.680 29.630 0.00 0.00 42.45 4.01
318 319 9.049523 TCAACATAAAGCAAAACATAAATGCAA 57.950 25.926 0.00 0.00 42.45 4.08
319 320 8.599055 TCAACATAAAGCAAAACATAAATGCA 57.401 26.923 0.00 0.00 42.45 3.96
320 321 9.316859 GTTCAACATAAAGCAAAACATAAATGC 57.683 29.630 0.00 0.00 40.34 3.56
321 322 9.810231 GGTTCAACATAAAGCAAAACATAAATG 57.190 29.630 0.00 0.00 0.00 2.32
322 323 8.707839 CGGTTCAACATAAAGCAAAACATAAAT 58.292 29.630 0.00 0.00 0.00 1.40
323 324 7.169982 CCGGTTCAACATAAAGCAAAACATAAA 59.830 33.333 0.00 0.00 0.00 1.40
324 325 6.642950 CCGGTTCAACATAAAGCAAAACATAA 59.357 34.615 0.00 0.00 0.00 1.90
325 326 6.153067 CCGGTTCAACATAAAGCAAAACATA 58.847 36.000 0.00 0.00 0.00 2.29
326 327 4.987912 CCGGTTCAACATAAAGCAAAACAT 59.012 37.500 0.00 0.00 0.00 2.71
327 328 4.142138 ACCGGTTCAACATAAAGCAAAACA 60.142 37.500 0.00 0.00 0.00 2.83
328 329 4.364860 ACCGGTTCAACATAAAGCAAAAC 58.635 39.130 0.00 0.00 0.00 2.43
329 330 4.657436 ACCGGTTCAACATAAAGCAAAA 57.343 36.364 0.00 0.00 0.00 2.44
330 331 5.336055 CCATACCGGTTCAACATAAAGCAAA 60.336 40.000 15.04 0.00 0.00 3.68
331 332 4.156922 CCATACCGGTTCAACATAAAGCAA 59.843 41.667 15.04 0.00 0.00 3.91
332 333 3.692101 CCATACCGGTTCAACATAAAGCA 59.308 43.478 15.04 0.00 0.00 3.91
333 334 3.066203 CCCATACCGGTTCAACATAAAGC 59.934 47.826 15.04 0.00 0.00 3.51
334 335 3.066203 GCCCATACCGGTTCAACATAAAG 59.934 47.826 15.04 0.00 0.00 1.85
335 336 3.018149 GCCCATACCGGTTCAACATAAA 58.982 45.455 15.04 0.00 0.00 1.40
336 337 2.645802 GCCCATACCGGTTCAACATAA 58.354 47.619 15.04 0.00 0.00 1.90
476 480 3.710722 CGCAGGAGCCCACCTCTT 61.711 66.667 0.00 0.00 40.57 2.85
558 575 2.907917 CTCCGCCTCCTAGGTCCG 60.908 72.222 9.08 9.78 37.80 4.79
559 576 2.128507 CACTCCGCCTCCTAGGTCC 61.129 68.421 9.08 0.00 37.80 4.46
560 577 2.128507 CCACTCCGCCTCCTAGGTC 61.129 68.421 9.08 0.00 37.80 3.85
561 578 2.042843 CCACTCCGCCTCCTAGGT 60.043 66.667 9.08 0.00 37.80 3.08
562 579 2.840102 CCCACTCCGCCTCCTAGG 60.840 72.222 0.82 0.82 38.80 3.02
563 580 3.541713 GCCCACTCCGCCTCCTAG 61.542 72.222 0.00 0.00 0.00 3.02
564 581 4.075793 AGCCCACTCCGCCTCCTA 62.076 66.667 0.00 0.00 0.00 2.94
567 584 4.459089 GTGAGCCCACTCCGCCTC 62.459 72.222 0.00 0.00 42.74 4.70
1668 1701 2.299993 TTGCAGCAATAGTCTCCTCG 57.700 50.000 2.83 0.00 0.00 4.63
2888 2923 0.459237 GTCAGTCCTGATCACCTGCG 60.459 60.000 0.00 0.00 42.18 5.18
2987 3022 1.225704 CCATTCTGAGGAGGGGTGC 59.774 63.158 0.00 0.00 0.00 5.01
3027 3062 3.055094 ACCGAGCAACCTCAAGAATATGT 60.055 43.478 0.00 0.00 38.00 2.29
3126 3161 9.349713 ACAAGGTATTCTTCATCAAAACAAGTA 57.650 29.630 0.00 0.00 32.41 2.24
3127 3162 8.237811 ACAAGGTATTCTTCATCAAAACAAGT 57.762 30.769 0.00 0.00 32.41 3.16
3128 3163 9.533253 AAACAAGGTATTCTTCATCAAAACAAG 57.467 29.630 0.00 0.00 32.41 3.16
3129 3164 9.883142 AAAACAAGGTATTCTTCATCAAAACAA 57.117 25.926 0.00 0.00 32.41 2.83
3130 3165 9.311916 CAAAACAAGGTATTCTTCATCAAAACA 57.688 29.630 0.00 0.00 32.41 2.83
3131 3166 9.528018 TCAAAACAAGGTATTCTTCATCAAAAC 57.472 29.630 0.00 0.00 32.41 2.43
3133 3168 9.695526 CATCAAAACAAGGTATTCTTCATCAAA 57.304 29.630 0.00 0.00 32.41 2.69
3134 3169 9.076781 TCATCAAAACAAGGTATTCTTCATCAA 57.923 29.630 0.00 0.00 32.41 2.57
3135 3170 8.634335 TCATCAAAACAAGGTATTCTTCATCA 57.366 30.769 0.00 0.00 32.41 3.07
3136 3171 9.565213 CTTCATCAAAACAAGGTATTCTTCATC 57.435 33.333 0.00 0.00 32.41 2.92
3137 3172 8.031277 GCTTCATCAAAACAAGGTATTCTTCAT 58.969 33.333 0.00 0.00 32.41 2.57
3138 3173 7.014134 TGCTTCATCAAAACAAGGTATTCTTCA 59.986 33.333 0.00 0.00 32.41 3.02
3139 3174 7.370383 TGCTTCATCAAAACAAGGTATTCTTC 58.630 34.615 0.00 0.00 32.41 2.87
3140 3175 7.014615 ACTGCTTCATCAAAACAAGGTATTCTT 59.985 33.333 0.00 0.00 35.79 2.52
3141 3176 6.491403 ACTGCTTCATCAAAACAAGGTATTCT 59.509 34.615 0.00 0.00 0.00 2.40
3142 3177 6.681777 ACTGCTTCATCAAAACAAGGTATTC 58.318 36.000 0.00 0.00 0.00 1.75
3143 3178 6.655078 ACTGCTTCATCAAAACAAGGTATT 57.345 33.333 0.00 0.00 0.00 1.89
3144 3179 6.655078 AACTGCTTCATCAAAACAAGGTAT 57.345 33.333 0.00 0.00 0.00 2.73
3145 3180 7.446931 TCATAACTGCTTCATCAAAACAAGGTA 59.553 33.333 0.00 0.00 0.00 3.08
3146 3181 6.265196 TCATAACTGCTTCATCAAAACAAGGT 59.735 34.615 0.00 0.00 0.00 3.50
3147 3182 6.583806 GTCATAACTGCTTCATCAAAACAAGG 59.416 38.462 0.00 0.00 0.00 3.61
3148 3183 7.140705 TGTCATAACTGCTTCATCAAAACAAG 58.859 34.615 0.00 0.00 0.00 3.16
3149 3184 7.036996 TGTCATAACTGCTTCATCAAAACAA 57.963 32.000 0.00 0.00 0.00 2.83
3150 3185 6.631971 TGTCATAACTGCTTCATCAAAACA 57.368 33.333 0.00 0.00 0.00 2.83
3151 3186 5.570589 GCTGTCATAACTGCTTCATCAAAAC 59.429 40.000 0.00 0.00 44.42 2.43
3152 3187 5.335897 GGCTGTCATAACTGCTTCATCAAAA 60.336 40.000 0.00 0.00 46.33 2.44
3153 3188 4.156556 GGCTGTCATAACTGCTTCATCAAA 59.843 41.667 0.00 0.00 46.33 2.69
3154 3189 3.691118 GGCTGTCATAACTGCTTCATCAA 59.309 43.478 0.00 0.00 46.33 2.57
3155 3190 3.273434 GGCTGTCATAACTGCTTCATCA 58.727 45.455 0.00 0.00 46.33 3.07
3156 3191 3.064545 GTGGCTGTCATAACTGCTTCATC 59.935 47.826 0.00 0.00 46.33 2.92
3157 3192 3.012518 GTGGCTGTCATAACTGCTTCAT 58.987 45.455 0.00 0.00 46.33 2.57
3158 3193 2.224499 TGTGGCTGTCATAACTGCTTCA 60.224 45.455 0.00 0.00 46.33 3.02
3159 3194 2.417933 CTGTGGCTGTCATAACTGCTTC 59.582 50.000 0.00 0.00 46.33 3.86
3160 3195 2.038952 TCTGTGGCTGTCATAACTGCTT 59.961 45.455 0.00 0.00 46.33 3.91
3161 3196 1.625315 TCTGTGGCTGTCATAACTGCT 59.375 47.619 0.00 0.00 46.33 4.24
3162 3197 1.734465 GTCTGTGGCTGTCATAACTGC 59.266 52.381 0.00 0.00 46.38 4.40
3163 3198 2.738846 GTGTCTGTGGCTGTCATAACTG 59.261 50.000 0.00 0.00 0.00 3.16
3164 3199 2.289694 GGTGTCTGTGGCTGTCATAACT 60.290 50.000 0.00 0.00 0.00 2.24
3165 3200 2.076863 GGTGTCTGTGGCTGTCATAAC 58.923 52.381 0.00 0.00 0.00 1.89
3166 3201 1.696884 TGGTGTCTGTGGCTGTCATAA 59.303 47.619 0.00 0.00 0.00 1.90
3167 3202 1.347062 TGGTGTCTGTGGCTGTCATA 58.653 50.000 0.00 0.00 0.00 2.15
3168 3203 0.694771 ATGGTGTCTGTGGCTGTCAT 59.305 50.000 0.00 0.00 0.00 3.06
3169 3204 0.035317 GATGGTGTCTGTGGCTGTCA 59.965 55.000 0.00 0.00 0.00 3.58
3170 3205 0.035317 TGATGGTGTCTGTGGCTGTC 59.965 55.000 0.00 0.00 0.00 3.51
3171 3206 0.473755 TTGATGGTGTCTGTGGCTGT 59.526 50.000 0.00 0.00 0.00 4.40
3172 3207 1.162698 CTTGATGGTGTCTGTGGCTG 58.837 55.000 0.00 0.00 0.00 4.85
3173 3208 1.059098 TCTTGATGGTGTCTGTGGCT 58.941 50.000 0.00 0.00 0.00 4.75
3174 3209 1.896220 TTCTTGATGGTGTCTGTGGC 58.104 50.000 0.00 0.00 0.00 5.01
3175 3210 4.836825 AGTATTCTTGATGGTGTCTGTGG 58.163 43.478 0.00 0.00 0.00 4.17
3176 3211 6.036517 GCTTAGTATTCTTGATGGTGTCTGTG 59.963 42.308 0.00 0.00 0.00 3.66
3177 3212 6.109359 GCTTAGTATTCTTGATGGTGTCTGT 58.891 40.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.