Multiple sequence alignment - TraesCS7B01G174900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G174900 | chr7B | 100.000 | 3273 | 0 | 0 | 1 | 3273 | 246001079 | 246004351 | 0.000000e+00 | 6045.0 |
1 | TraesCS7B01G174900 | chr7B | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 139050892 | 139050960 | 2.060000e-22 | 117.0 |
2 | TraesCS7B01G174900 | chr7B | 87.838 | 74 | 6 | 3 | 1811 | 1883 | 424155066 | 424154995 | 2.090000e-12 | 84.2 |
3 | TraesCS7B01G174900 | chr7B | 92.727 | 55 | 1 | 1 | 2509 | 2560 | 251035662 | 251035716 | 3.500000e-10 | 76.8 |
4 | TraesCS7B01G174900 | chr7A | 92.316 | 976 | 34 | 15 | 747 | 1707 | 290915713 | 290916662 | 0.000000e+00 | 1349.0 |
5 | TraesCS7B01G174900 | chr7A | 88.717 | 647 | 40 | 11 | 1879 | 2513 | 290917153 | 290917778 | 0.000000e+00 | 760.0 |
6 | TraesCS7B01G174900 | chr7A | 80.866 | 439 | 33 | 15 | 2853 | 3273 | 290917867 | 290918272 | 6.870000e-77 | 298.0 |
7 | TraesCS7B01G174900 | chr7A | 97.674 | 86 | 2 | 0 | 2696 | 2781 | 369968719 | 369968804 | 7.320000e-32 | 148.0 |
8 | TraesCS7B01G174900 | chr7A | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 643187035 | 643186967 | 2.060000e-22 | 117.0 |
9 | TraesCS7B01G174900 | chr7A | 91.139 | 79 | 5 | 1 | 1719 | 1795 | 290917052 | 290917130 | 4.470000e-19 | 106.0 |
10 | TraesCS7B01G174900 | chr7A | 97.778 | 45 | 1 | 0 | 2779 | 2823 | 717441236 | 717441192 | 9.740000e-11 | 78.7 |
11 | TraesCS7B01G174900 | chr7A | 89.831 | 59 | 6 | 0 | 1713 | 1771 | 290916930 | 290916988 | 3.500000e-10 | 76.8 |
12 | TraesCS7B01G174900 | chr7A | 94.286 | 35 | 2 | 0 | 1849 | 1883 | 81912875 | 81912909 | 2.000000e-03 | 54.7 |
13 | TraesCS7B01G174900 | chr7D | 93.764 | 914 | 24 | 7 | 787 | 1668 | 265695875 | 265696787 | 0.000000e+00 | 1341.0 |
14 | TraesCS7B01G174900 | chr7D | 96.292 | 809 | 19 | 6 | 1733 | 2532 | 265697783 | 265698589 | 0.000000e+00 | 1317.0 |
15 | TraesCS7B01G174900 | chr7D | 97.333 | 300 | 4 | 2 | 2978 | 3273 | 265698860 | 265699159 | 1.050000e-139 | 507.0 |
16 | TraesCS7B01G174900 | chr7D | 92.814 | 334 | 22 | 2 | 243 | 574 | 265695338 | 265695671 | 1.770000e-132 | 483.0 |
17 | TraesCS7B01G174900 | chr7D | 90.303 | 165 | 16 | 0 | 77 | 241 | 614668975 | 614669139 | 1.980000e-52 | 217.0 |
18 | TraesCS7B01G174900 | chr7D | 97.561 | 82 | 2 | 0 | 1 | 82 | 265695256 | 265695337 | 1.220000e-29 | 141.0 |
19 | TraesCS7B01G174900 | chr7D | 87.500 | 120 | 12 | 2 | 2671 | 2787 | 33051255 | 33051136 | 5.700000e-28 | 135.0 |
20 | TraesCS7B01G174900 | chr7D | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 265698588 | 265698656 | 2.060000e-22 | 117.0 |
21 | TraesCS7B01G174900 | chr7D | 91.379 | 58 | 2 | 1 | 2512 | 2566 | 534570746 | 534570689 | 3.500000e-10 | 76.8 |
22 | TraesCS7B01G174900 | chr7D | 92.308 | 39 | 3 | 0 | 2502 | 2540 | 101559129 | 101559167 | 4.560000e-04 | 56.5 |
23 | TraesCS7B01G174900 | chr1B | 93.210 | 162 | 11 | 0 | 80 | 241 | 32457996 | 32458157 | 4.220000e-59 | 239.0 |
24 | TraesCS7B01G174900 | chr1B | 91.875 | 160 | 13 | 0 | 80 | 239 | 546968649 | 546968490 | 1.180000e-54 | 224.0 |
25 | TraesCS7B01G174900 | chr1B | 90.741 | 162 | 15 | 0 | 80 | 241 | 546704467 | 546704306 | 1.980000e-52 | 217.0 |
26 | TraesCS7B01G174900 | chr1B | 93.333 | 45 | 2 | 1 | 1812 | 1855 | 662552779 | 662552735 | 7.580000e-07 | 65.8 |
27 | TraesCS7B01G174900 | chrUn | 92.547 | 161 | 11 | 1 | 81 | 241 | 100779963 | 100780122 | 2.540000e-56 | 230.0 |
28 | TraesCS7B01G174900 | chrUn | 97.222 | 36 | 1 | 0 | 2505 | 2540 | 87983105 | 87983140 | 9.810000e-06 | 62.1 |
29 | TraesCS7B01G174900 | chrUn | 100.000 | 28 | 0 | 0 | 1857 | 1884 | 109027337 | 109027364 | 6.000000e-03 | 52.8 |
30 | TraesCS7B01G174900 | chr4B | 91.925 | 161 | 13 | 0 | 81 | 241 | 483266540 | 483266380 | 3.290000e-55 | 226.0 |
31 | TraesCS7B01G174900 | chr4B | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 469014392 | 469014460 | 2.060000e-22 | 117.0 |
32 | TraesCS7B01G174900 | chr4B | 86.486 | 74 | 5 | 5 | 2547 | 2619 | 94812154 | 94812223 | 3.500000e-10 | 76.8 |
33 | TraesCS7B01G174900 | chr4B | 97.561 | 41 | 0 | 1 | 2547 | 2587 | 665049731 | 665049692 | 5.860000e-08 | 69.4 |
34 | TraesCS7B01G174900 | chr4B | 97.561 | 41 | 0 | 1 | 2547 | 2587 | 665102787 | 665102748 | 5.860000e-08 | 69.4 |
35 | TraesCS7B01G174900 | chr4B | 100.000 | 30 | 0 | 0 | 2511 | 2540 | 489376089 | 489376118 | 4.560000e-04 | 56.5 |
36 | TraesCS7B01G174900 | chr5B | 91.304 | 161 | 14 | 0 | 81 | 241 | 539322883 | 539322723 | 1.530000e-53 | 220.0 |
37 | TraesCS7B01G174900 | chr5B | 90.909 | 44 | 2 | 2 | 2509 | 2550 | 480641439 | 480641482 | 1.270000e-04 | 58.4 |
38 | TraesCS7B01G174900 | chr5B | 94.286 | 35 | 2 | 0 | 1849 | 1883 | 259544202 | 259544236 | 2.000000e-03 | 54.7 |
39 | TraesCS7B01G174900 | chr3D | 90.741 | 162 | 15 | 0 | 80 | 241 | 90685558 | 90685719 | 1.980000e-52 | 217.0 |
40 | TraesCS7B01G174900 | chr3D | 90.303 | 165 | 16 | 0 | 77 | 241 | 238999410 | 238999574 | 1.980000e-52 | 217.0 |
41 | TraesCS7B01G174900 | chr3D | 94.505 | 91 | 4 | 1 | 2691 | 2781 | 224304756 | 224304667 | 4.400000e-29 | 139.0 |
42 | TraesCS7B01G174900 | chr3D | 100.000 | 32 | 0 | 0 | 2509 | 2540 | 182423656 | 182423625 | 3.530000e-05 | 60.2 |
43 | TraesCS7B01G174900 | chr3D | 91.111 | 45 | 1 | 2 | 2510 | 2551 | 554066217 | 554066173 | 1.270000e-04 | 58.4 |
44 | TraesCS7B01G174900 | chr3D | 84.127 | 63 | 5 | 5 | 1825 | 1885 | 562522875 | 562522934 | 4.560000e-04 | 56.5 |
45 | TraesCS7B01G174900 | chr3D | 88.889 | 45 | 3 | 1 | 1809 | 1851 | 565821374 | 565821330 | 2.000000e-03 | 54.7 |
46 | TraesCS7B01G174900 | chr3D | 100.000 | 28 | 0 | 0 | 1857 | 1884 | 278514970 | 278514943 | 6.000000e-03 | 52.8 |
47 | TraesCS7B01G174900 | chr3D | 100.000 | 28 | 0 | 0 | 1855 | 1882 | 576384043 | 576384016 | 6.000000e-03 | 52.8 |
48 | TraesCS7B01G174900 | chr5A | 94.681 | 94 | 5 | 0 | 2688 | 2781 | 654622380 | 654622287 | 2.630000e-31 | 147.0 |
49 | TraesCS7B01G174900 | chr6D | 93.750 | 96 | 6 | 0 | 2688 | 2783 | 437774041 | 437774136 | 9.470000e-31 | 145.0 |
50 | TraesCS7B01G174900 | chr6D | 92.079 | 101 | 5 | 3 | 2696 | 2796 | 385917026 | 385916929 | 4.400000e-29 | 139.0 |
51 | TraesCS7B01G174900 | chr6D | 89.623 | 106 | 10 | 1 | 2680 | 2785 | 14202699 | 14202803 | 2.050000e-27 | 134.0 |
52 | TraesCS7B01G174900 | chr6D | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 409753277 | 409753345 | 2.060000e-22 | 117.0 |
53 | TraesCS7B01G174900 | chr6D | 85.897 | 78 | 5 | 2 | 2779 | 2850 | 453586456 | 453586533 | 9.740000e-11 | 78.7 |
54 | TraesCS7B01G174900 | chr6D | 84.722 | 72 | 6 | 1 | 2779 | 2850 | 107695661 | 107695595 | 2.110000e-07 | 67.6 |
55 | TraesCS7B01G174900 | chr6D | 93.182 | 44 | 3 | 0 | 1809 | 1852 | 469794046 | 469794089 | 7.580000e-07 | 65.8 |
56 | TraesCS7B01G174900 | chr6D | 94.444 | 36 | 2 | 0 | 2505 | 2540 | 468308042 | 468308077 | 4.560000e-04 | 56.5 |
57 | TraesCS7B01G174900 | chr6D | 100.000 | 29 | 0 | 0 | 2512 | 2540 | 115962135 | 115962107 | 2.000000e-03 | 54.7 |
58 | TraesCS7B01G174900 | chr6D | 96.875 | 32 | 1 | 0 | 2509 | 2540 | 294399972 | 294400003 | 2.000000e-03 | 54.7 |
59 | TraesCS7B01G174900 | chr6D | 100.000 | 29 | 0 | 0 | 2512 | 2540 | 360590747 | 360590775 | 2.000000e-03 | 54.7 |
60 | TraesCS7B01G174900 | chr6D | 100.000 | 28 | 0 | 0 | 2505 | 2532 | 72351058 | 72351031 | 6.000000e-03 | 52.8 |
61 | TraesCS7B01G174900 | chr6D | 100.000 | 28 | 0 | 0 | 2512 | 2539 | 204060252 | 204060279 | 6.000000e-03 | 52.8 |
62 | TraesCS7B01G174900 | chr6D | 100.000 | 28 | 0 | 0 | 2512 | 2539 | 204186011 | 204186038 | 6.000000e-03 | 52.8 |
63 | TraesCS7B01G174900 | chr6D | 100.000 | 28 | 0 | 0 | 2512 | 2539 | 212121615 | 212121588 | 6.000000e-03 | 52.8 |
64 | TraesCS7B01G174900 | chr6D | 100.000 | 28 | 0 | 0 | 2512 | 2539 | 365730100 | 365730073 | 6.000000e-03 | 52.8 |
65 | TraesCS7B01G174900 | chr2B | 91.089 | 101 | 9 | 0 | 2684 | 2784 | 744873078 | 744873178 | 1.580000e-28 | 137.0 |
66 | TraesCS7B01G174900 | chr2B | 83.908 | 87 | 12 | 2 | 2547 | 2632 | 29895301 | 29895216 | 7.530000e-12 | 82.4 |
67 | TraesCS7B01G174900 | chr2B | 88.235 | 51 | 4 | 2 | 2490 | 2540 | 518050043 | 518050091 | 3.530000e-05 | 60.2 |
68 | TraesCS7B01G174900 | chr2B | 94.595 | 37 | 1 | 1 | 1857 | 1893 | 746033067 | 746033032 | 4.560000e-04 | 56.5 |
69 | TraesCS7B01G174900 | chr3B | 88.496 | 113 | 9 | 4 | 2695 | 2807 | 15111110 | 15111002 | 2.050000e-27 | 134.0 |
70 | TraesCS7B01G174900 | chr3B | 100.000 | 29 | 0 | 0 | 1857 | 1885 | 310849011 | 310848983 | 2.000000e-03 | 54.7 |
71 | TraesCS7B01G174900 | chr6B | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 175326002 | 175326070 | 2.060000e-22 | 117.0 |
72 | TraesCS7B01G174900 | chr6B | 89.333 | 75 | 6 | 2 | 2544 | 2616 | 474269468 | 474269394 | 3.480000e-15 | 93.5 |
73 | TraesCS7B01G174900 | chr6B | 89.796 | 49 | 2 | 2 | 2505 | 2550 | 417491665 | 417491713 | 3.530000e-05 | 60.2 |
74 | TraesCS7B01G174900 | chr6B | 89.362 | 47 | 4 | 1 | 1810 | 1855 | 514678472 | 514678518 | 1.270000e-04 | 58.4 |
75 | TraesCS7B01G174900 | chr5D | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 561659721 | 561659653 | 2.060000e-22 | 117.0 |
76 | TraesCS7B01G174900 | chr5D | 97.778 | 45 | 1 | 0 | 2779 | 2823 | 210216983 | 210216939 | 9.740000e-11 | 78.7 |
77 | TraesCS7B01G174900 | chr5D | 80.220 | 91 | 15 | 3 | 2575 | 2663 | 111788699 | 111788610 | 7.580000e-07 | 65.8 |
78 | TraesCS7B01G174900 | chr5D | 97.059 | 34 | 1 | 0 | 2501 | 2534 | 508629207 | 508629174 | 1.270000e-04 | 58.4 |
79 | TraesCS7B01G174900 | chr5D | 100.000 | 29 | 0 | 0 | 1859 | 1887 | 330236709 | 330236737 | 2.000000e-03 | 54.7 |
80 | TraesCS7B01G174900 | chr3A | 97.101 | 69 | 2 | 0 | 2630 | 2698 | 662422364 | 662422432 | 2.060000e-22 | 117.0 |
81 | TraesCS7B01G174900 | chr3A | 92.157 | 51 | 1 | 1 | 2511 | 2558 | 585929088 | 585929038 | 5.860000e-08 | 69.4 |
82 | TraesCS7B01G174900 | chr2A | 89.362 | 94 | 9 | 1 | 2605 | 2698 | 747680978 | 747681070 | 2.060000e-22 | 117.0 |
83 | TraesCS7B01G174900 | chr2A | 91.111 | 45 | 3 | 1 | 1812 | 1855 | 680521961 | 680522005 | 3.530000e-05 | 60.2 |
84 | TraesCS7B01G174900 | chr1A | 89.412 | 85 | 8 | 1 | 2547 | 2631 | 30319480 | 30319397 | 4.470000e-19 | 106.0 |
85 | TraesCS7B01G174900 | chr1A | 100.000 | 30 | 0 | 0 | 1822 | 1851 | 8320155 | 8320126 | 4.560000e-04 | 56.5 |
86 | TraesCS7B01G174900 | chr1A | 100.000 | 28 | 0 | 0 | 1860 | 1887 | 109518527 | 109518554 | 6.000000e-03 | 52.8 |
87 | TraesCS7B01G174900 | chr1D | 97.778 | 45 | 1 | 0 | 2779 | 2823 | 120787901 | 120787857 | 9.740000e-11 | 78.7 |
88 | TraesCS7B01G174900 | chr1D | 97.778 | 45 | 1 | 0 | 2779 | 2823 | 384950605 | 384950561 | 9.740000e-11 | 78.7 |
89 | TraesCS7B01G174900 | chr1D | 94.000 | 50 | 3 | 0 | 2774 | 2823 | 8796517 | 8796468 | 3.500000e-10 | 76.8 |
90 | TraesCS7B01G174900 | chr1D | 86.207 | 58 | 6 | 2 | 1828 | 1884 | 235570598 | 235570542 | 9.810000e-06 | 62.1 |
91 | TraesCS7B01G174900 | chr1D | 94.872 | 39 | 2 | 0 | 1814 | 1852 | 348064348 | 348064386 | 9.810000e-06 | 62.1 |
92 | TraesCS7B01G174900 | chr1D | 100.000 | 32 | 0 | 0 | 2509 | 2540 | 32123627 | 32123658 | 3.530000e-05 | 60.2 |
93 | TraesCS7B01G174900 | chr1D | 100.000 | 30 | 0 | 0 | 2512 | 2541 | 330817890 | 330817861 | 4.560000e-04 | 56.5 |
94 | TraesCS7B01G174900 | chr4D | 92.727 | 55 | 1 | 1 | 2509 | 2560 | 73772218 | 73772272 | 3.500000e-10 | 76.8 |
95 | TraesCS7B01G174900 | chr4D | 90.196 | 51 | 2 | 3 | 2493 | 2540 | 492804242 | 492804292 | 2.730000e-06 | 63.9 |
96 | TraesCS7B01G174900 | chr4D | 100.000 | 30 | 0 | 0 | 2511 | 2540 | 9296447 | 9296476 | 4.560000e-04 | 56.5 |
97 | TraesCS7B01G174900 | chr4D | 100.000 | 30 | 0 | 0 | 2511 | 2540 | 397390685 | 397390714 | 4.560000e-04 | 56.5 |
98 | TraesCS7B01G174900 | chr4D | 100.000 | 29 | 0 | 0 | 2512 | 2540 | 10986243 | 10986215 | 2.000000e-03 | 54.7 |
99 | TraesCS7B01G174900 | chr2D | 92.593 | 54 | 3 | 1 | 2779 | 2832 | 72819994 | 72819942 | 3.500000e-10 | 76.8 |
100 | TraesCS7B01G174900 | chr2D | 97.561 | 41 | 1 | 0 | 2547 | 2587 | 175594449 | 175594489 | 1.630000e-08 | 71.3 |
101 | TraesCS7B01G174900 | chr2D | 89.362 | 47 | 3 | 1 | 2512 | 2558 | 192752371 | 192752415 | 1.270000e-04 | 58.4 |
102 | TraesCS7B01G174900 | chr6A | 91.071 | 56 | 2 | 1 | 2508 | 2560 | 311860845 | 311860900 | 4.530000e-09 | 73.1 |
103 | TraesCS7B01G174900 | chr6A | 97.222 | 36 | 1 | 0 | 2505 | 2540 | 239115994 | 239115959 | 9.810000e-06 | 62.1 |
104 | TraesCS7B01G174900 | chr6A | 94.444 | 36 | 2 | 0 | 2505 | 2540 | 134548540 | 134548575 | 4.560000e-04 | 56.5 |
105 | TraesCS7B01G174900 | chr6A | 100.000 | 28 | 0 | 0 | 1857 | 1884 | 572128713 | 572128686 | 6.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G174900 | chr7B | 246001079 | 246004351 | 3272 | False | 6045.00 | 6045 | 100.000000 | 1 | 3273 | 1 | chr7B.!!$F2 | 3272 |
1 | TraesCS7B01G174900 | chr7A | 290915713 | 290918272 | 2559 | False | 517.96 | 1349 | 88.573800 | 747 | 3273 | 5 | chr7A.!!$F3 | 2526 |
2 | TraesCS7B01G174900 | chr7D | 265695256 | 265699159 | 3903 | False | 651.00 | 1341 | 95.810833 | 1 | 3273 | 6 | chr7D.!!$F3 | 3272 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
281 | 282 | 0.030235 | GGTGGGTTTTGAACGAGTGC | 59.970 | 55.0 | 0.0 | 0.0 | 0.0 | 4.4 | F |
356 | 358 | 0.540923 | GCTCTCTCCTGTGCCAATCT | 59.459 | 55.0 | 0.0 | 0.0 | 0.0 | 2.4 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1294 | 1384 | 1.106285 | AATGCCTGAAATTCCGGAGC | 58.894 | 50.0 | 3.34 | 3.02 | 0.00 | 4.70 | R |
2309 | 3674 | 0.039256 | GAACATGGAAGCGCTTGCAA | 60.039 | 50.0 | 41.25 | 27.08 | 43.87 | 4.08 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
47 | 48 | 1.172180 | AATGAACACCCTGCACACCG | 61.172 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
84 | 85 | 5.685520 | AAAAGAAGAGGTGGGATCTACTC | 57.314 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
85 | 86 | 3.322191 | AGAAGAGGTGGGATCTACTCC | 57.678 | 52.381 | 0.00 | 0.00 | 44.11 | 3.85 |
94 | 95 | 2.368311 | GGATCTACTCCCTCCGTTCT | 57.632 | 55.000 | 0.00 | 0.00 | 38.19 | 3.01 |
95 | 96 | 2.668625 | GGATCTACTCCCTCCGTTCTT | 58.331 | 52.381 | 0.00 | 0.00 | 38.19 | 2.52 |
96 | 97 | 3.830121 | GGATCTACTCCCTCCGTTCTTA | 58.170 | 50.000 | 0.00 | 0.00 | 38.19 | 2.10 |
97 | 98 | 4.213513 | GGATCTACTCCCTCCGTTCTTAA | 58.786 | 47.826 | 0.00 | 0.00 | 38.19 | 1.85 |
98 | 99 | 4.648307 | GGATCTACTCCCTCCGTTCTTAAA | 59.352 | 45.833 | 0.00 | 0.00 | 38.19 | 1.52 |
99 | 100 | 5.304871 | GGATCTACTCCCTCCGTTCTTAAAT | 59.695 | 44.000 | 0.00 | 0.00 | 38.19 | 1.40 |
100 | 101 | 6.492772 | GGATCTACTCCCTCCGTTCTTAAATA | 59.507 | 42.308 | 0.00 | 0.00 | 38.19 | 1.40 |
101 | 102 | 7.178805 | GGATCTACTCCCTCCGTTCTTAAATAT | 59.821 | 40.741 | 0.00 | 0.00 | 38.19 | 1.28 |
102 | 103 | 9.240734 | GATCTACTCCCTCCGTTCTTAAATATA | 57.759 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
103 | 104 | 9.597681 | ATCTACTCCCTCCGTTCTTAAATATAA | 57.402 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
104 | 105 | 9.075678 | TCTACTCCCTCCGTTCTTAAATATAAG | 57.924 | 37.037 | 0.00 | 0.00 | 39.97 | 1.73 |
105 | 106 | 7.672122 | ACTCCCTCCGTTCTTAAATATAAGT | 57.328 | 36.000 | 0.00 | 0.00 | 39.65 | 2.24 |
106 | 107 | 7.724287 | ACTCCCTCCGTTCTTAAATATAAGTC | 58.276 | 38.462 | 0.00 | 0.00 | 39.65 | 3.01 |
107 | 108 | 7.564292 | ACTCCCTCCGTTCTTAAATATAAGTCT | 59.436 | 37.037 | 0.00 | 0.00 | 39.65 | 3.24 |
108 | 109 | 8.315220 | TCCCTCCGTTCTTAAATATAAGTCTT | 57.685 | 34.615 | 0.00 | 0.00 | 39.65 | 3.01 |
109 | 110 | 8.765517 | TCCCTCCGTTCTTAAATATAAGTCTTT | 58.234 | 33.333 | 0.00 | 0.00 | 39.65 | 2.52 |
110 | 111 | 8.827677 | CCCTCCGTTCTTAAATATAAGTCTTTG | 58.172 | 37.037 | 0.00 | 0.00 | 39.65 | 2.77 |
111 | 112 | 9.379791 | CCTCCGTTCTTAAATATAAGTCTTTGT | 57.620 | 33.333 | 0.00 | 0.00 | 39.65 | 2.83 |
128 | 129 | 8.367660 | AGTCTTTGTAGAGATTTCACTATGGA | 57.632 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
129 | 130 | 8.986991 | AGTCTTTGTAGAGATTTCACTATGGAT | 58.013 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
130 | 131 | 9.255304 | GTCTTTGTAGAGATTTCACTATGGATC | 57.745 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
131 | 132 | 8.981659 | TCTTTGTAGAGATTTCACTATGGATCA | 58.018 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
132 | 133 | 8.948631 | TTTGTAGAGATTTCACTATGGATCAC | 57.051 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
133 | 134 | 7.660030 | TGTAGAGATTTCACTATGGATCACA | 57.340 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
134 | 135 | 8.255111 | TGTAGAGATTTCACTATGGATCACAT | 57.745 | 34.615 | 0.00 | 0.00 | 43.68 | 3.21 |
135 | 136 | 9.367160 | TGTAGAGATTTCACTATGGATCACATA | 57.633 | 33.333 | 0.00 | 0.00 | 41.03 | 2.29 |
136 | 137 | 9.632807 | GTAGAGATTTCACTATGGATCACATAC | 57.367 | 37.037 | 0.00 | 0.00 | 41.03 | 2.39 |
137 | 138 | 7.374272 | AGAGATTTCACTATGGATCACATACG | 58.626 | 38.462 | 0.00 | 0.00 | 41.03 | 3.06 |
138 | 139 | 7.231519 | AGAGATTTCACTATGGATCACATACGA | 59.768 | 37.037 | 0.00 | 0.00 | 41.03 | 3.43 |
139 | 140 | 7.726216 | AGATTTCACTATGGATCACATACGAA | 58.274 | 34.615 | 0.00 | 2.20 | 41.03 | 3.85 |
140 | 141 | 8.370940 | AGATTTCACTATGGATCACATACGAAT | 58.629 | 33.333 | 0.00 | 0.00 | 41.03 | 3.34 |
141 | 142 | 7.713764 | TTTCACTATGGATCACATACGAATG | 57.286 | 36.000 | 0.00 | 0.00 | 41.03 | 2.67 |
143 | 144 | 7.519032 | TCACTATGGATCACATACGAATGTA | 57.481 | 36.000 | 0.00 | 0.00 | 44.70 | 2.29 |
144 | 145 | 8.122472 | TCACTATGGATCACATACGAATGTAT | 57.878 | 34.615 | 0.00 | 0.00 | 44.70 | 2.29 |
184 | 185 | 7.138692 | AGTGTAGATTCACTCATTTTGCTTC | 57.861 | 36.000 | 0.00 | 0.00 | 44.07 | 3.86 |
185 | 186 | 6.017933 | GTGTAGATTCACTCATTTTGCTTCG | 58.982 | 40.000 | 0.00 | 0.00 | 35.68 | 3.79 |
186 | 187 | 5.700832 | TGTAGATTCACTCATTTTGCTTCGT | 59.299 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
187 | 188 | 6.871492 | TGTAGATTCACTCATTTTGCTTCGTA | 59.129 | 34.615 | 0.00 | 0.00 | 0.00 | 3.43 |
188 | 189 | 6.992063 | AGATTCACTCATTTTGCTTCGTAT | 57.008 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
189 | 190 | 9.031360 | GTAGATTCACTCATTTTGCTTCGTATA | 57.969 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
190 | 191 | 8.668510 | AGATTCACTCATTTTGCTTCGTATAT | 57.331 | 30.769 | 0.00 | 0.00 | 0.00 | 0.86 |
191 | 192 | 9.764363 | AGATTCACTCATTTTGCTTCGTATATA | 57.236 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
193 | 194 | 8.942338 | TTCACTCATTTTGCTTCGTATATAGT | 57.058 | 30.769 | 0.00 | 0.00 | 0.00 | 2.12 |
194 | 195 | 8.942338 | TCACTCATTTTGCTTCGTATATAGTT | 57.058 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
195 | 196 | 9.378551 | TCACTCATTTTGCTTCGTATATAGTTT | 57.621 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
240 | 241 | 9.411189 | AGACTTATATTTAGAAACGGAGAGAGT | 57.589 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
241 | 242 | 9.453325 | GACTTATATTTAGAAACGGAGAGAGTG | 57.547 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
281 | 282 | 0.030235 | GGTGGGTTTTGAACGAGTGC | 59.970 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
287 | 288 | 3.547413 | GGGTTTTGAACGAGTGCAGTAAC | 60.547 | 47.826 | 0.00 | 0.00 | 0.00 | 2.50 |
326 | 328 | 1.507141 | CGCGGGTCCAATTATGAGCC | 61.507 | 60.000 | 12.97 | 12.97 | 44.94 | 4.70 |
356 | 358 | 0.540923 | GCTCTCTCCTGTGCCAATCT | 59.459 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
370 | 372 | 7.040823 | CCTGTGCCAATCTTCCTAATAATTCTC | 60.041 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
372 | 374 | 7.500227 | TGTGCCAATCTTCCTAATAATTCTCTG | 59.500 | 37.037 | 0.00 | 0.00 | 0.00 | 3.35 |
374 | 376 | 8.274322 | TGCCAATCTTCCTAATAATTCTCTGAA | 58.726 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
406 | 408 | 2.279741 | TGTCCATCAAGAATAGTGCGC | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 6.09 |
409 | 411 | 2.016318 | CCATCAAGAATAGTGCGCCAA | 58.984 | 47.619 | 4.18 | 0.00 | 0.00 | 4.52 |
447 | 449 | 2.229062 | GCCCTAGTTCAGCTTCCAAAAC | 59.771 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
487 | 489 | 8.492673 | AGTATATCGACTTGAGAATTTTTGCA | 57.507 | 30.769 | 0.00 | 0.00 | 0.00 | 4.08 |
494 | 496 | 4.405358 | ACTTGAGAATTTTTGCACCAAGGA | 59.595 | 37.500 | 0.00 | 0.00 | 35.25 | 3.36 |
495 | 497 | 5.104982 | ACTTGAGAATTTTTGCACCAAGGAA | 60.105 | 36.000 | 0.00 | 0.00 | 35.25 | 3.36 |
508 | 510 | 1.675552 | CAAGGAAAGTTGGTCCGTGT | 58.324 | 50.000 | 2.37 | 0.00 | 39.12 | 4.49 |
513 | 515 | 2.215196 | GAAAGTTGGTCCGTGTAGCAA | 58.785 | 47.619 | 0.00 | 0.00 | 34.65 | 3.91 |
524 | 527 | 5.413499 | GTCCGTGTAGCAACTTAAGGATTA | 58.587 | 41.667 | 7.53 | 0.00 | 0.00 | 1.75 |
543 | 546 | 1.494960 | ACCTGGAAAGCAAAGCCAAA | 58.505 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
558 | 561 | 7.601508 | AGCAAAGCCAAATTAAAGATCTTCAAG | 59.398 | 33.333 | 8.78 | 0.00 | 0.00 | 3.02 |
574 | 577 | 1.014564 | CAAGTCTCGAAAGCCCGGAC | 61.015 | 60.000 | 0.73 | 0.00 | 33.25 | 4.79 |
576 | 579 | 2.602267 | TCTCGAAAGCCCGGACCA | 60.602 | 61.111 | 0.73 | 0.00 | 0.00 | 4.02 |
578 | 581 | 3.234630 | CTCGAAAGCCCGGACCACA | 62.235 | 63.158 | 0.73 | 0.00 | 0.00 | 4.17 |
579 | 582 | 2.281208 | CGAAAGCCCGGACCACAA | 60.281 | 61.111 | 0.73 | 0.00 | 0.00 | 3.33 |
623 | 682 | 3.136443 | ACAATCTCTGAAGACACCCAACA | 59.864 | 43.478 | 0.00 | 0.00 | 33.32 | 3.33 |
624 | 683 | 4.202503 | ACAATCTCTGAAGACACCCAACAT | 60.203 | 41.667 | 0.00 | 0.00 | 33.32 | 2.71 |
625 | 684 | 3.407424 | TCTCTGAAGACACCCAACATG | 57.593 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
626 | 685 | 2.972021 | TCTCTGAAGACACCCAACATGA | 59.028 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
643 | 702 | 5.097742 | ACATGATGACGGTAGAAAATCCA | 57.902 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
656 | 715 | 1.176527 | AAATCCATTGCTGGGTGACG | 58.823 | 50.000 | 0.00 | 0.00 | 43.34 | 4.35 |
661 | 720 | 1.068434 | CCATTGCTGGGTGACGTTTTT | 59.932 | 47.619 | 0.00 | 0.00 | 39.04 | 1.94 |
704 | 763 | 3.365535 | GCGGATGCTGGGTTTTGT | 58.634 | 55.556 | 0.00 | 0.00 | 38.39 | 2.83 |
705 | 764 | 1.665442 | GCGGATGCTGGGTTTTGTT | 59.335 | 52.632 | 0.00 | 0.00 | 38.39 | 2.83 |
707 | 766 | 1.476488 | GCGGATGCTGGGTTTTGTTAT | 59.524 | 47.619 | 0.00 | 0.00 | 38.39 | 1.89 |
709 | 768 | 3.129638 | GCGGATGCTGGGTTTTGTTATTA | 59.870 | 43.478 | 0.00 | 0.00 | 38.39 | 0.98 |
714 | 773 | 3.181416 | TGCTGGGTTTTGTTATTAGGGGT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 4.95 |
715 | 774 | 3.835978 | GCTGGGTTTTGTTATTAGGGGTT | 59.164 | 43.478 | 0.00 | 0.00 | 0.00 | 4.11 |
716 | 775 | 4.322424 | GCTGGGTTTTGTTATTAGGGGTTG | 60.322 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
717 | 776 | 5.076057 | TGGGTTTTGTTATTAGGGGTTGA | 57.924 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
718 | 777 | 5.081032 | TGGGTTTTGTTATTAGGGGTTGAG | 58.919 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
720 | 779 | 4.464951 | GGTTTTGTTATTAGGGGTTGAGGG | 59.535 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
722 | 781 | 3.223940 | TGTTATTAGGGGTTGAGGGGA | 57.776 | 47.619 | 0.00 | 0.00 | 0.00 | 4.81 |
723 | 782 | 3.754976 | TGTTATTAGGGGTTGAGGGGAT | 58.245 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
724 | 783 | 3.461831 | TGTTATTAGGGGTTGAGGGGATG | 59.538 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
725 | 784 | 0.853530 | ATTAGGGGTTGAGGGGATGC | 59.146 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
726 | 785 | 1.286305 | TTAGGGGTTGAGGGGATGCC | 61.286 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
727 | 786 | 4.143301 | GGGGTTGAGGGGATGCCC | 62.143 | 72.222 | 15.97 | 15.97 | 44.51 | 5.36 |
756 | 815 | 2.632377 | TGAGAAATCTTGACGGGATGC | 58.368 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
757 | 816 | 1.943340 | GAGAAATCTTGACGGGATGCC | 59.057 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
784 | 843 | 6.370166 | GGTGACTGTAGAGAAAGAAGGAATTG | 59.630 | 42.308 | 0.00 | 0.00 | 0.00 | 2.32 |
785 | 844 | 6.370166 | GTGACTGTAGAGAAAGAAGGAATTGG | 59.630 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
850 | 909 | 2.741145 | GGTAGAGACATGGTGACTCCT | 58.259 | 52.381 | 0.00 | 0.00 | 39.41 | 3.69 |
851 | 910 | 2.691011 | GGTAGAGACATGGTGACTCCTC | 59.309 | 54.545 | 0.00 | 0.00 | 39.41 | 3.71 |
852 | 911 | 1.859302 | AGAGACATGGTGACTCCTCC | 58.141 | 55.000 | 0.00 | 0.00 | 39.41 | 4.30 |
854 | 913 | 2.114616 | GAGACATGGTGACTCCTCCAT | 58.885 | 52.381 | 0.00 | 0.00 | 44.88 | 3.41 |
903 | 963 | 0.842467 | CTGGTGAGGGGAAGGAAGGT | 60.842 | 60.000 | 0.00 | 0.00 | 0.00 | 3.50 |
933 | 1019 | 1.410882 | GAGAGCAGTGTAGGGACATCC | 59.589 | 57.143 | 0.00 | 0.00 | 38.04 | 3.51 |
1283 | 1373 | 1.564207 | GGCCTCGTGTAATTCGTACC | 58.436 | 55.000 | 0.00 | 0.00 | 30.94 | 3.34 |
1294 | 1384 | 1.793134 | ATTCGTACCTAGGCGAGCCG | 61.793 | 60.000 | 9.30 | 4.26 | 41.95 | 5.52 |
1352 | 1442 | 7.230712 | TGGCAGTATCGATATACAGAGAGAAAA | 59.769 | 37.037 | 8.66 | 0.00 | 40.49 | 2.29 |
1394 | 1484 | 2.901192 | TCGAACTTGGAGGGTTCATGTA | 59.099 | 45.455 | 7.24 | 0.00 | 41.99 | 2.29 |
1443 | 1533 | 1.674441 | TCCGTCGTCAATGTAGCCTAG | 59.326 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
1446 | 1536 | 3.065786 | CCGTCGTCAATGTAGCCTAGTTA | 59.934 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
1551 | 1641 | 2.418976 | GGCTTGACAAATTAGGTCGGAC | 59.581 | 50.000 | 0.00 | 0.00 | 38.10 | 4.79 |
1652 | 1742 | 8.267183 | TCTTTTGTGCAATCATCTCTTAGGATA | 58.733 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
1677 | 1767 | 3.002042 | CGCTGAAATTGTGGCTCAGATAG | 59.998 | 47.826 | 8.03 | 0.00 | 39.15 | 2.08 |
1714 | 1804 | 8.897752 | ACATTTGTTATCTAGATTTTGCTCTCC | 58.102 | 33.333 | 11.25 | 0.00 | 0.00 | 3.71 |
1715 | 1805 | 7.539712 | TTTGTTATCTAGATTTTGCTCTCCG | 57.460 | 36.000 | 11.25 | 0.00 | 0.00 | 4.63 |
1716 | 1806 | 5.601662 | TGTTATCTAGATTTTGCTCTCCGG | 58.398 | 41.667 | 11.25 | 0.00 | 0.00 | 5.14 |
1717 | 1807 | 5.362717 | TGTTATCTAGATTTTGCTCTCCGGA | 59.637 | 40.000 | 11.25 | 2.93 | 0.00 | 5.14 |
1749 | 2101 | 4.263905 | TGCTTCTGGTGATGGGATAAACTT | 60.264 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
1786 | 3129 | 6.833933 | TGCTGATTCTAGGATGTGACTAGTAA | 59.166 | 38.462 | 0.00 | 0.00 | 39.13 | 2.24 |
1907 | 3260 | 4.080638 | TGTTACATCCTGCCATGTGTGATA | 60.081 | 41.667 | 3.84 | 0.00 | 37.57 | 2.15 |
1978 | 3342 | 4.341366 | AGAACCATTTTCCTGGCAAAAG | 57.659 | 40.909 | 0.00 | 0.00 | 40.15 | 2.27 |
2089 | 3453 | 1.987770 | GCACTTCCATTTCATTGTGCG | 59.012 | 47.619 | 0.00 | 0.00 | 40.67 | 5.34 |
2130 | 3495 | 6.459670 | TGGTAAGCTGATAGTGAAATCGTA | 57.540 | 37.500 | 0.00 | 0.00 | 0.00 | 3.43 |
2316 | 3681 | 3.678915 | ATGCTTTTGTTTGTTGCAAGC | 57.321 | 38.095 | 0.00 | 0.00 | 40.29 | 4.01 |
2362 | 3727 | 7.981225 | AGCAAGGCAATAATTACCTAAACATTG | 59.019 | 33.333 | 0.00 | 0.00 | 32.08 | 2.82 |
2363 | 3728 | 7.254421 | GCAAGGCAATAATTACCTAAACATTGC | 60.254 | 37.037 | 8.97 | 8.97 | 41.14 | 3.56 |
2373 | 3739 | 1.818674 | CTAAACATTGCACCCTCCCAC | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
2403 | 3769 | 7.333528 | TGACTTGTTCTAAAAGCATGAGTTT | 57.666 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2531 | 3897 | 4.870636 | TGTACTCCCTCCGTTCCTAAATA | 58.129 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2534 | 3900 | 3.959449 | ACTCCCTCCGTTCCTAAATACTC | 59.041 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
2536 | 3902 | 2.367894 | CCCTCCGTTCCTAAATACTCCC | 59.632 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2538 | 3904 | 3.321396 | CCTCCGTTCCTAAATACTCCCTC | 59.679 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
2539 | 3905 | 3.303049 | TCCGTTCCTAAATACTCCCTCC | 58.697 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2540 | 3906 | 2.367894 | CCGTTCCTAAATACTCCCTCCC | 59.632 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2541 | 3907 | 2.367894 | CGTTCCTAAATACTCCCTCCCC | 59.632 | 54.545 | 0.00 | 0.00 | 0.00 | 4.81 |
2542 | 3908 | 3.666568 | GTTCCTAAATACTCCCTCCCCT | 58.333 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2544 | 3910 | 5.222086 | GTTCCTAAATACTCCCTCCCCTAA | 58.778 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
2546 | 3912 | 6.064618 | TCCTAAATACTCCCTCCCCTAAAT | 57.935 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
2547 | 3913 | 7.196180 | TCCTAAATACTCCCTCCCCTAAATA | 57.804 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2548 | 3914 | 7.021251 | TCCTAAATACTCCCTCCCCTAAATAC | 58.979 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
2549 | 3915 | 7.023744 | CCTAAATACTCCCTCCCCTAAATACT | 58.976 | 42.308 | 0.00 | 0.00 | 0.00 | 2.12 |
2551 | 3917 | 3.347759 | ACTCCCTCCCCTAAATACTCC | 57.652 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2553 | 3919 | 2.182536 | CTCCCTCCCCTAAATACTCCCT | 59.817 | 54.545 | 0.00 | 0.00 | 0.00 | 4.20 |
2554 | 3920 | 2.181642 | TCCCTCCCCTAAATACTCCCTC | 59.818 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2555 | 3921 | 2.622210 | CCTCCCCTAAATACTCCCTCC | 58.378 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
2557 | 3923 | 1.577242 | TCCCCTAAATACTCCCTCCGT | 59.423 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
2558 | 3924 | 1.969208 | CCCCTAAATACTCCCTCCGTC | 59.031 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
2559 | 3925 | 1.969208 | CCCTAAATACTCCCTCCGTCC | 59.031 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
2560 | 3926 | 2.674420 | CCTAAATACTCCCTCCGTCCA | 58.326 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2562 | 3928 | 3.646637 | CCTAAATACTCCCTCCGTCCAAT | 59.353 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
2563 | 3929 | 4.836736 | CCTAAATACTCCCTCCGTCCAATA | 59.163 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
2565 | 3931 | 5.906772 | AAATACTCCCTCCGTCCAATAAT | 57.093 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
2566 | 3932 | 4.891992 | ATACTCCCTCCGTCCAATAATG | 57.108 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
2567 | 3933 | 2.478292 | ACTCCCTCCGTCCAATAATGT | 58.522 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
2568 | 3934 | 3.649843 | ACTCCCTCCGTCCAATAATGTA | 58.350 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
2569 | 3935 | 4.035112 | ACTCCCTCCGTCCAATAATGTAA | 58.965 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
2570 | 3936 | 4.101119 | ACTCCCTCCGTCCAATAATGTAAG | 59.899 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
2571 | 3937 | 4.291792 | TCCCTCCGTCCAATAATGTAAGA | 58.708 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
2572 | 3938 | 4.100498 | TCCCTCCGTCCAATAATGTAAGAC | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
2574 | 3940 | 4.441079 | CCTCCGTCCAATAATGTAAGACGT | 60.441 | 45.833 | 9.63 | 0.00 | 46.62 | 4.34 |
2575 | 3941 | 5.075858 | TCCGTCCAATAATGTAAGACGTT | 57.924 | 39.130 | 9.63 | 0.00 | 46.62 | 3.99 |
2576 | 3942 | 5.481105 | TCCGTCCAATAATGTAAGACGTTT | 58.519 | 37.500 | 9.63 | 0.00 | 46.62 | 3.60 |
2577 | 3943 | 5.933463 | TCCGTCCAATAATGTAAGACGTTTT | 59.067 | 36.000 | 9.63 | 0.00 | 46.62 | 2.43 |
2578 | 3944 | 6.019152 | CCGTCCAATAATGTAAGACGTTTTG | 58.981 | 40.000 | 0.83 | 0.00 | 46.62 | 2.44 |
2579 | 3945 | 6.347888 | CCGTCCAATAATGTAAGACGTTTTGT | 60.348 | 38.462 | 0.83 | 0.00 | 46.62 | 2.83 |
2580 | 3946 | 6.518395 | CGTCCAATAATGTAAGACGTTTTGTG | 59.482 | 38.462 | 0.83 | 0.00 | 43.89 | 3.33 |
2581 | 3947 | 7.569774 | CGTCCAATAATGTAAGACGTTTTGTGA | 60.570 | 37.037 | 0.83 | 0.00 | 43.89 | 3.58 |
2582 | 3948 | 7.532884 | GTCCAATAATGTAAGACGTTTTGTGAC | 59.467 | 37.037 | 0.83 | 0.00 | 0.00 | 3.67 |
2583 | 3949 | 7.226918 | TCCAATAATGTAAGACGTTTTGTGACA | 59.773 | 33.333 | 0.83 | 0.00 | 0.00 | 3.58 |
2584 | 3950 | 7.322699 | CCAATAATGTAAGACGTTTTGTGACAC | 59.677 | 37.037 | 0.83 | 0.00 | 0.00 | 3.67 |
2585 | 3951 | 7.724305 | ATAATGTAAGACGTTTTGTGACACT | 57.276 | 32.000 | 7.20 | 0.00 | 0.00 | 3.55 |
2586 | 3952 | 8.821147 | ATAATGTAAGACGTTTTGTGACACTA | 57.179 | 30.769 | 7.20 | 0.00 | 0.00 | 2.74 |
2587 | 3953 | 7.724305 | AATGTAAGACGTTTTGTGACACTAT | 57.276 | 32.000 | 7.20 | 0.00 | 0.00 | 2.12 |
2588 | 3954 | 8.821147 | AATGTAAGACGTTTTGTGACACTATA | 57.179 | 30.769 | 7.20 | 0.00 | 0.00 | 1.31 |
2589 | 3955 | 8.997621 | ATGTAAGACGTTTTGTGACACTATAT | 57.002 | 30.769 | 7.20 | 0.00 | 0.00 | 0.86 |
2590 | 3956 | 8.821147 | TGTAAGACGTTTTGTGACACTATATT | 57.179 | 30.769 | 7.20 | 0.00 | 0.00 | 1.28 |
2591 | 3957 | 9.911138 | TGTAAGACGTTTTGTGACACTATATTA | 57.089 | 29.630 | 7.20 | 0.00 | 0.00 | 0.98 |
2620 | 3986 | 3.994931 | AACCGTCCTATATTATGGGCC | 57.005 | 47.619 | 0.00 | 0.00 | 0.00 | 5.80 |
2621 | 3987 | 1.829222 | ACCGTCCTATATTATGGGCCG | 59.171 | 52.381 | 2.86 | 2.86 | 0.00 | 6.13 |
2622 | 3988 | 1.138266 | CCGTCCTATATTATGGGCCGG | 59.862 | 57.143 | 13.14 | 13.14 | 34.12 | 6.13 |
2623 | 3989 | 2.104967 | CGTCCTATATTATGGGCCGGA | 58.895 | 52.381 | 5.05 | 0.00 | 0.00 | 5.14 |
2624 | 3990 | 2.100916 | CGTCCTATATTATGGGCCGGAG | 59.899 | 54.545 | 5.05 | 0.00 | 0.00 | 4.63 |
2625 | 3991 | 3.105283 | GTCCTATATTATGGGCCGGAGT | 58.895 | 50.000 | 5.05 | 0.00 | 0.00 | 3.85 |
2626 | 3992 | 3.104512 | TCCTATATTATGGGCCGGAGTG | 58.895 | 50.000 | 5.05 | 0.00 | 0.00 | 3.51 |
2627 | 3993 | 3.104512 | CCTATATTATGGGCCGGAGTGA | 58.895 | 50.000 | 5.05 | 0.00 | 0.00 | 3.41 |
2628 | 3994 | 3.133003 | CCTATATTATGGGCCGGAGTGAG | 59.867 | 52.174 | 5.05 | 0.00 | 0.00 | 3.51 |
2702 | 4068 | 8.954350 | TGTAGACATACTTTAGAGTGTACTTCC | 58.046 | 37.037 | 0.00 | 0.00 | 36.60 | 3.46 |
2703 | 4069 | 9.176460 | GTAGACATACTTTAGAGTGTACTTCCT | 57.824 | 37.037 | 0.00 | 0.00 | 36.60 | 3.36 |
2704 | 4070 | 8.283699 | AGACATACTTTAGAGTGTACTTCCTC | 57.716 | 38.462 | 0.00 | 0.00 | 36.60 | 3.71 |
2705 | 4071 | 7.339976 | AGACATACTTTAGAGTGTACTTCCTCC | 59.660 | 40.741 | 0.00 | 0.00 | 36.60 | 4.30 |
2706 | 4072 | 6.095160 | ACATACTTTAGAGTGTACTTCCTCCG | 59.905 | 42.308 | 0.00 | 0.00 | 36.60 | 4.63 |
2707 | 4073 | 4.405548 | ACTTTAGAGTGTACTTCCTCCGT | 58.594 | 43.478 | 0.00 | 0.00 | 33.99 | 4.69 |
2708 | 4074 | 5.564550 | ACTTTAGAGTGTACTTCCTCCGTA | 58.435 | 41.667 | 0.00 | 0.00 | 33.99 | 4.02 |
2709 | 4075 | 6.006449 | ACTTTAGAGTGTACTTCCTCCGTAA | 58.994 | 40.000 | 0.00 | 0.00 | 33.99 | 3.18 |
2710 | 4076 | 6.491403 | ACTTTAGAGTGTACTTCCTCCGTAAA | 59.509 | 38.462 | 0.00 | 0.00 | 33.99 | 2.01 |
2711 | 4077 | 4.780275 | AGAGTGTACTTCCTCCGTAAAC | 57.220 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
2712 | 4078 | 4.405548 | AGAGTGTACTTCCTCCGTAAACT | 58.594 | 43.478 | 0.00 | 0.00 | 37.95 | 2.66 |
2713 | 4079 | 5.564550 | AGAGTGTACTTCCTCCGTAAACTA | 58.435 | 41.667 | 0.00 | 0.00 | 35.97 | 2.24 |
2714 | 4080 | 6.006449 | AGAGTGTACTTCCTCCGTAAACTAA | 58.994 | 40.000 | 0.00 | 0.00 | 35.97 | 2.24 |
2715 | 4081 | 6.662663 | AGAGTGTACTTCCTCCGTAAACTAAT | 59.337 | 38.462 | 0.00 | 0.00 | 35.97 | 1.73 |
2716 | 4082 | 7.831193 | AGAGTGTACTTCCTCCGTAAACTAATA | 59.169 | 37.037 | 0.00 | 0.00 | 35.97 | 0.98 |
2717 | 4083 | 8.530804 | AGTGTACTTCCTCCGTAAACTAATAT | 57.469 | 34.615 | 0.00 | 0.00 | 34.49 | 1.28 |
2718 | 4084 | 9.632638 | AGTGTACTTCCTCCGTAAACTAATATA | 57.367 | 33.333 | 0.00 | 0.00 | 34.49 | 0.86 |
2723 | 4089 | 8.358895 | ACTTCCTCCGTAAACTAATATAAGAGC | 58.641 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
2724 | 4090 | 6.906659 | TCCTCCGTAAACTAATATAAGAGCG | 58.093 | 40.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2725 | 4091 | 6.488006 | TCCTCCGTAAACTAATATAAGAGCGT | 59.512 | 38.462 | 0.00 | 0.00 | 0.00 | 5.07 |
2726 | 4092 | 7.013655 | TCCTCCGTAAACTAATATAAGAGCGTT | 59.986 | 37.037 | 0.00 | 0.00 | 0.00 | 4.84 |
2727 | 4093 | 7.650903 | CCTCCGTAAACTAATATAAGAGCGTTT | 59.349 | 37.037 | 0.00 | 0.00 | 0.00 | 3.60 |
2728 | 4094 | 9.669353 | CTCCGTAAACTAATATAAGAGCGTTTA | 57.331 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
2729 | 4095 | 9.669353 | TCCGTAAACTAATATAAGAGCGTTTAG | 57.331 | 33.333 | 0.00 | 0.00 | 30.36 | 1.85 |
2730 | 4096 | 9.669353 | CCGTAAACTAATATAAGAGCGTTTAGA | 57.331 | 33.333 | 0.00 | 0.00 | 30.36 | 2.10 |
2744 | 4110 | 9.654663 | AAGAGCGTTTAGATCACTAAAATAGTT | 57.345 | 29.630 | 0.00 | 0.00 | 45.97 | 2.24 |
2757 | 4123 | 9.339850 | TCACTAAAATAGTTATCTAGACGCTCT | 57.660 | 33.333 | 0.00 | 0.00 | 36.76 | 4.09 |
2758 | 4124 | 9.953697 | CACTAAAATAGTTATCTAGACGCTCTT | 57.046 | 33.333 | 0.00 | 0.00 | 36.76 | 2.85 |
2775 | 4141 | 8.569641 | AGACGCTCTTATATTAGTTTACAGAGG | 58.430 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
2776 | 4142 | 7.659186 | ACGCTCTTATATTAGTTTACAGAGGG | 58.341 | 38.462 | 8.36 | 8.36 | 42.53 | 4.30 |
2777 | 4143 | 7.504911 | ACGCTCTTATATTAGTTTACAGAGGGA | 59.495 | 37.037 | 14.96 | 0.00 | 40.49 | 4.20 |
2778 | 4144 | 8.024285 | CGCTCTTATATTAGTTTACAGAGGGAG | 58.976 | 40.741 | 4.76 | 0.00 | 40.49 | 4.30 |
2779 | 4145 | 8.862085 | GCTCTTATATTAGTTTACAGAGGGAGT | 58.138 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2802 | 4168 | 0.315886 | TTCGCTCACTTTGCTCCGTA | 59.684 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2822 | 4188 | 5.291128 | CCGTATGTAGTCACTTGTTGGAATC | 59.709 | 44.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2831 | 4205 | 6.812160 | AGTCACTTGTTGGAATCGACTTATAC | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 1.47 |
2835 | 4209 | 8.808529 | CACTTGTTGGAATCGACTTATACTTAG | 58.191 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
2845 | 4219 | 6.115446 | TCGACTTATACTTAGAAACGGAGGA | 58.885 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2851 | 4225 | 4.453177 | ACTTAGAAACGGAGGAAGTAGC | 57.547 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
2860 | 4263 | 1.134670 | GGAGGAAGTAGCGAGCAACAT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
2923 | 4326 | 1.186917 | TTGGCATTGGCACTTCAGGG | 61.187 | 55.000 | 13.07 | 0.00 | 43.71 | 4.45 |
2950 | 4353 | 2.290960 | GGGTGGGCTTGTCTTCAGTTAT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2959 | 4362 | 7.255486 | GGGCTTGTCTTCAGTTATTGTTACTTT | 60.255 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
2972 | 4375 | 4.551702 | TGTTACTTTGCTAGCTCATCCA | 57.448 | 40.909 | 17.23 | 1.37 | 0.00 | 3.41 |
2999 | 4410 | 3.024547 | TGTTCGGATTCTACCTCCTCAG | 58.975 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
3100 | 4515 | 0.523072 | AGTGCAAATGGTGTGATCGC | 59.477 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
15 | 16 | 4.016444 | GGTGTTCATTCCCTTTGATGCTA | 58.984 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
82 | 83 | 7.953752 | AGACTTATATTTAAGAACGGAGGGAG | 58.046 | 38.462 | 9.58 | 0.00 | 38.56 | 4.30 |
83 | 84 | 7.909485 | AGACTTATATTTAAGAACGGAGGGA | 57.091 | 36.000 | 9.58 | 0.00 | 38.56 | 4.20 |
84 | 85 | 8.827677 | CAAAGACTTATATTTAAGAACGGAGGG | 58.172 | 37.037 | 9.58 | 0.00 | 38.56 | 4.30 |
85 | 86 | 9.379791 | ACAAAGACTTATATTTAAGAACGGAGG | 57.620 | 33.333 | 9.58 | 0.00 | 38.56 | 4.30 |
102 | 103 | 8.816894 | TCCATAGTGAAATCTCTACAAAGACTT | 58.183 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
103 | 104 | 8.367660 | TCCATAGTGAAATCTCTACAAAGACT | 57.632 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
104 | 105 | 9.255304 | GATCCATAGTGAAATCTCTACAAAGAC | 57.745 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
105 | 106 | 8.981659 | TGATCCATAGTGAAATCTCTACAAAGA | 58.018 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
106 | 107 | 9.039870 | GTGATCCATAGTGAAATCTCTACAAAG | 57.960 | 37.037 | 0.00 | 0.00 | 0.00 | 2.77 |
107 | 108 | 8.539544 | TGTGATCCATAGTGAAATCTCTACAAA | 58.460 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
108 | 109 | 8.078060 | TGTGATCCATAGTGAAATCTCTACAA | 57.922 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
109 | 110 | 7.660030 | TGTGATCCATAGTGAAATCTCTACA | 57.340 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
110 | 111 | 9.632807 | GTATGTGATCCATAGTGAAATCTCTAC | 57.367 | 37.037 | 4.66 | 0.00 | 36.71 | 2.59 |
111 | 112 | 8.515414 | CGTATGTGATCCATAGTGAAATCTCTA | 58.485 | 37.037 | 4.66 | 0.00 | 36.71 | 2.43 |
112 | 113 | 7.231519 | TCGTATGTGATCCATAGTGAAATCTCT | 59.768 | 37.037 | 4.66 | 0.00 | 36.71 | 3.10 |
113 | 114 | 7.371159 | TCGTATGTGATCCATAGTGAAATCTC | 58.629 | 38.462 | 4.66 | 0.00 | 36.71 | 2.75 |
114 | 115 | 7.290110 | TCGTATGTGATCCATAGTGAAATCT | 57.710 | 36.000 | 4.66 | 0.00 | 36.71 | 2.40 |
115 | 116 | 7.946655 | TTCGTATGTGATCCATAGTGAAATC | 57.053 | 36.000 | 4.66 | 0.00 | 36.71 | 2.17 |
116 | 117 | 7.933577 | ACATTCGTATGTGATCCATAGTGAAAT | 59.066 | 33.333 | 6.89 | 9.18 | 43.29 | 2.17 |
117 | 118 | 7.272244 | ACATTCGTATGTGATCCATAGTGAAA | 58.728 | 34.615 | 6.89 | 6.51 | 43.29 | 2.69 |
118 | 119 | 6.816136 | ACATTCGTATGTGATCCATAGTGAA | 58.184 | 36.000 | 6.89 | 14.34 | 43.29 | 3.18 |
119 | 120 | 6.405278 | ACATTCGTATGTGATCCATAGTGA | 57.595 | 37.500 | 6.89 | 4.16 | 43.29 | 3.41 |
120 | 121 | 8.177980 | CATACATTCGTATGTGATCCATAGTG | 57.822 | 38.462 | 16.91 | 0.39 | 46.70 | 2.74 |
161 | 162 | 6.017933 | CGAAGCAAAATGAGTGAATCTACAC | 58.982 | 40.000 | 0.00 | 0.00 | 40.60 | 2.90 |
162 | 163 | 5.700832 | ACGAAGCAAAATGAGTGAATCTACA | 59.299 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
163 | 164 | 6.170675 | ACGAAGCAAAATGAGTGAATCTAC | 57.829 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
164 | 165 | 9.764363 | ATATACGAAGCAAAATGAGTGAATCTA | 57.236 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
165 | 166 | 6.992063 | ATACGAAGCAAAATGAGTGAATCT | 57.008 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
167 | 168 | 9.547753 | ACTATATACGAAGCAAAATGAGTGAAT | 57.452 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
168 | 169 | 8.942338 | ACTATATACGAAGCAAAATGAGTGAA | 57.058 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
169 | 170 | 8.942338 | AACTATATACGAAGCAAAATGAGTGA | 57.058 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
214 | 215 | 9.411189 | ACTCTCTCCGTTTCTAAATATAAGTCT | 57.589 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
215 | 216 | 9.453325 | CACTCTCTCCGTTTCTAAATATAAGTC | 57.547 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
216 | 217 | 8.968969 | ACACTCTCTCCGTTTCTAAATATAAGT | 58.031 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
217 | 218 | 9.239002 | CACACTCTCTCCGTTTCTAAATATAAG | 57.761 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
218 | 219 | 8.963725 | TCACACTCTCTCCGTTTCTAAATATAA | 58.036 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
219 | 220 | 8.515695 | TCACACTCTCTCCGTTTCTAAATATA | 57.484 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
220 | 221 | 7.406031 | TCACACTCTCTCCGTTTCTAAATAT | 57.594 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
221 | 222 | 6.625300 | GCTCACACTCTCTCCGTTTCTAAATA | 60.625 | 42.308 | 0.00 | 0.00 | 0.00 | 1.40 |
222 | 223 | 5.715070 | CTCACACTCTCTCCGTTTCTAAAT | 58.285 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
223 | 224 | 4.558898 | GCTCACACTCTCTCCGTTTCTAAA | 60.559 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
224 | 225 | 3.057456 | GCTCACACTCTCTCCGTTTCTAA | 60.057 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
225 | 226 | 2.488545 | GCTCACACTCTCTCCGTTTCTA | 59.511 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
226 | 227 | 1.271102 | GCTCACACTCTCTCCGTTTCT | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
227 | 228 | 1.271102 | AGCTCACACTCTCTCCGTTTC | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 2.78 |
228 | 229 | 1.333177 | AGCTCACACTCTCTCCGTTT | 58.667 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
229 | 230 | 1.000283 | CAAGCTCACACTCTCTCCGTT | 60.000 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
230 | 231 | 0.600557 | CAAGCTCACACTCTCTCCGT | 59.399 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
231 | 232 | 0.108898 | CCAAGCTCACACTCTCTCCG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
232 | 233 | 0.390998 | GCCAAGCTCACACTCTCTCC | 60.391 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
233 | 234 | 0.390998 | GGCCAAGCTCACACTCTCTC | 60.391 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
234 | 235 | 1.123861 | TGGCCAAGCTCACACTCTCT | 61.124 | 55.000 | 0.61 | 0.00 | 0.00 | 3.10 |
235 | 236 | 0.952984 | GTGGCCAAGCTCACACTCTC | 60.953 | 60.000 | 7.24 | 0.00 | 32.73 | 3.20 |
236 | 237 | 1.072159 | GTGGCCAAGCTCACACTCT | 59.928 | 57.895 | 7.24 | 0.00 | 32.73 | 3.24 |
237 | 238 | 0.819259 | TTGTGGCCAAGCTCACACTC | 60.819 | 55.000 | 7.24 | 0.00 | 38.61 | 3.51 |
238 | 239 | 0.395586 | TTTGTGGCCAAGCTCACACT | 60.396 | 50.000 | 7.24 | 0.00 | 38.61 | 3.55 |
239 | 240 | 0.249031 | GTTTGTGGCCAAGCTCACAC | 60.249 | 55.000 | 7.24 | 0.00 | 38.61 | 3.82 |
240 | 241 | 0.395586 | AGTTTGTGGCCAAGCTCACA | 60.396 | 50.000 | 7.24 | 0.00 | 37.56 | 3.58 |
241 | 242 | 2.419057 | AGTTTGTGGCCAAGCTCAC | 58.581 | 52.632 | 7.24 | 0.00 | 37.56 | 3.51 |
281 | 282 | 1.467342 | GCTACAAAAGGCCGGTTACTG | 59.533 | 52.381 | 1.90 | 0.00 | 0.00 | 2.74 |
287 | 288 | 1.648467 | GAGCAGCTACAAAAGGCCGG | 61.648 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
333 | 335 | 0.694771 | TGGCACAGGAGAGAGCAAAT | 59.305 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
370 | 372 | 8.625786 | TTGATGGACATGATATTATGGTTCAG | 57.374 | 34.615 | 11.76 | 0.00 | 32.32 | 3.02 |
372 | 374 | 8.853077 | TCTTGATGGACATGATATTATGGTTC | 57.147 | 34.615 | 11.76 | 1.79 | 32.32 | 3.62 |
386 | 388 | 2.279741 | GCGCACTATTCTTGATGGACA | 58.720 | 47.619 | 0.30 | 0.00 | 0.00 | 4.02 |
402 | 404 | 0.322366 | TCCATCACAGATTTGGCGCA | 60.322 | 50.000 | 10.83 | 0.00 | 0.00 | 6.09 |
406 | 408 | 2.621998 | GCCTCATCCATCACAGATTTGG | 59.378 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
409 | 411 | 1.144503 | GGGCCTCATCCATCACAGATT | 59.855 | 52.381 | 0.84 | 0.00 | 0.00 | 2.40 |
447 | 449 | 5.067023 | TCGATATACTATCCAGCATGCTCTG | 59.933 | 44.000 | 19.68 | 12.48 | 31.97 | 3.35 |
494 | 496 | 1.944709 | GTTGCTACACGGACCAACTTT | 59.055 | 47.619 | 0.00 | 0.00 | 35.80 | 2.66 |
495 | 497 | 1.140252 | AGTTGCTACACGGACCAACTT | 59.860 | 47.619 | 0.13 | 0.00 | 43.73 | 2.66 |
508 | 510 | 6.630203 | TTCCAGGTAATCCTTAAGTTGCTA | 57.370 | 37.500 | 0.97 | 0.00 | 43.07 | 3.49 |
513 | 515 | 5.514500 | TGCTTTCCAGGTAATCCTTAAGT | 57.486 | 39.130 | 0.97 | 0.00 | 43.07 | 2.24 |
524 | 527 | 1.494960 | TTTGGCTTTGCTTTCCAGGT | 58.505 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
528 | 531 | 6.875726 | AGATCTTTAATTTGGCTTTGCTTTCC | 59.124 | 34.615 | 0.00 | 0.00 | 0.00 | 3.13 |
543 | 546 | 7.065204 | GGCTTTCGAGACTTGAAGATCTTTAAT | 59.935 | 37.037 | 12.58 | 4.36 | 0.00 | 1.40 |
558 | 561 | 2.125633 | GGTCCGGGCTTTCGAGAC | 60.126 | 66.667 | 5.77 | 0.00 | 33.12 | 3.36 |
574 | 577 | 4.718940 | AAAAAGGTGTCTTGAGTTGTGG | 57.281 | 40.909 | 0.00 | 0.00 | 32.75 | 4.17 |
597 | 656 | 5.935945 | TGGGTGTCTTCAGAGATTGTTAAA | 58.064 | 37.500 | 0.00 | 0.00 | 33.70 | 1.52 |
600 | 659 | 4.137543 | GTTGGGTGTCTTCAGAGATTGTT | 58.862 | 43.478 | 0.00 | 0.00 | 33.70 | 2.83 |
610 | 669 | 2.416547 | CGTCATCATGTTGGGTGTCTTC | 59.583 | 50.000 | 3.98 | 0.00 | 0.00 | 2.87 |
623 | 682 | 5.009010 | GCAATGGATTTTCTACCGTCATCAT | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 2.45 |
624 | 683 | 4.335315 | GCAATGGATTTTCTACCGTCATCA | 59.665 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
625 | 684 | 4.576463 | AGCAATGGATTTTCTACCGTCATC | 59.424 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
626 | 685 | 4.336433 | CAGCAATGGATTTTCTACCGTCAT | 59.664 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
688 | 747 | 3.866883 | AATAACAAAACCCAGCATCCG | 57.133 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
700 | 759 | 3.924072 | TCCCCTCAACCCCTAATAACAAA | 59.076 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
701 | 760 | 3.543661 | TCCCCTCAACCCCTAATAACAA | 58.456 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
703 | 762 | 3.750922 | GCATCCCCTCAACCCCTAATAAC | 60.751 | 52.174 | 0.00 | 0.00 | 0.00 | 1.89 |
704 | 763 | 2.445525 | GCATCCCCTCAACCCCTAATAA | 59.554 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
705 | 764 | 2.062636 | GCATCCCCTCAACCCCTAATA | 58.937 | 52.381 | 0.00 | 0.00 | 0.00 | 0.98 |
707 | 766 | 1.286305 | GGCATCCCCTCAACCCCTAA | 61.286 | 60.000 | 0.00 | 0.00 | 0.00 | 2.69 |
709 | 768 | 3.023735 | GGCATCCCCTCAACCCCT | 61.024 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
732 | 791 | 5.564651 | GCATCCCGTCAAGATTTCTCAAAAA | 60.565 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
733 | 792 | 4.082787 | GCATCCCGTCAAGATTTCTCAAAA | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
734 | 793 | 3.440173 | GCATCCCGTCAAGATTTCTCAAA | 59.560 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
735 | 794 | 3.009723 | GCATCCCGTCAAGATTTCTCAA | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
736 | 795 | 2.632377 | GCATCCCGTCAAGATTTCTCA | 58.368 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
737 | 796 | 1.943340 | GGCATCCCGTCAAGATTTCTC | 59.057 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
738 | 797 | 2.044123 | GGCATCCCGTCAAGATTTCT | 57.956 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
752 | 811 | 0.103208 | CTCTACAGTCACCCGGCATC | 59.897 | 60.000 | 0.00 | 0.00 | 0.00 | 3.91 |
756 | 815 | 2.168496 | TCTTTCTCTACAGTCACCCGG | 58.832 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
757 | 816 | 3.367498 | CCTTCTTTCTCTACAGTCACCCG | 60.367 | 52.174 | 0.00 | 0.00 | 0.00 | 5.28 |
765 | 824 | 4.018415 | CCCCCAATTCCTTCTTTCTCTACA | 60.018 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
850 | 909 | 1.128200 | CGTACCATTCCCCTCATGGA | 58.872 | 55.000 | 5.94 | 0.00 | 43.70 | 3.41 |
851 | 910 | 0.837272 | ACGTACCATTCCCCTCATGG | 59.163 | 55.000 | 0.00 | 0.00 | 46.07 | 3.66 |
852 | 911 | 1.475034 | CCACGTACCATTCCCCTCATG | 60.475 | 57.143 | 0.00 | 0.00 | 0.00 | 3.07 |
854 | 913 | 1.268992 | CCCACGTACCATTCCCCTCA | 61.269 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
903 | 963 | 1.354031 | ACACTGCTCTCTCTCTCTCCA | 59.646 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
933 | 1019 | 0.609406 | TCTCTCCGGTGGTCACTCAG | 60.609 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
937 | 1023 | 0.322636 | TCTCTCTCTCCGGTGGTCAC | 60.323 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1294 | 1384 | 1.106285 | AATGCCTGAAATTCCGGAGC | 58.894 | 50.000 | 3.34 | 3.02 | 0.00 | 4.70 |
1352 | 1442 | 2.073816 | GAACACATCGGGAACAATCGT | 58.926 | 47.619 | 0.00 | 0.00 | 0.00 | 3.73 |
1443 | 1533 | 4.755411 | TCAGAAGGTCGATGGTTCATAAC | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
1446 | 1536 | 3.981071 | TTCAGAAGGTCGATGGTTCAT | 57.019 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
1551 | 1641 | 5.747197 | GCAATGAAATGGAGCATGTAAGAAG | 59.253 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1590 | 1680 | 7.169308 | ACGATCCTTTACAATACGCTTATCAAG | 59.831 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
1652 | 1742 | 1.160137 | GAGCCACAATTTCAGCGACT | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1677 | 1767 | 9.595823 | TCTAGATAACAAATGTAAGTAGTTGGC | 57.404 | 33.333 | 0.00 | 0.00 | 30.49 | 4.52 |
1749 | 2101 | 8.262601 | TCCTAGAATCAGCAATTGTCCTAATA | 57.737 | 34.615 | 7.40 | 0.00 | 0.00 | 0.98 |
1978 | 3342 | 4.120589 | CGAAGCTGGTTCTAAGGTATTCC | 58.879 | 47.826 | 16.54 | 0.00 | 32.33 | 3.01 |
2291 | 3656 | 6.456718 | GCTTGCAACAAACAAAAGCATAAGAA | 60.457 | 34.615 | 0.00 | 0.00 | 42.19 | 2.52 |
2309 | 3674 | 0.039256 | GAACATGGAAGCGCTTGCAA | 60.039 | 50.000 | 41.25 | 27.08 | 43.87 | 4.08 |
2316 | 3681 | 0.583438 | CATAGCCGAACATGGAAGCG | 59.417 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
2362 | 3727 | 3.017581 | ATGGAGGTGGGAGGGTGC | 61.018 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
2363 | 3728 | 1.616327 | TCATGGAGGTGGGAGGGTG | 60.616 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
2373 | 3739 | 4.761739 | TGCTTTTAGAACAAGTCATGGAGG | 59.238 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2514 | 3880 | 3.303049 | GGAGTATTTAGGAACGGAGGGA | 58.697 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2531 | 3897 | 2.090096 | GGGAGTATTTAGGGGAGGGAGT | 60.090 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
2534 | 3900 | 2.622210 | GAGGGAGTATTTAGGGGAGGG | 58.378 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
2536 | 3902 | 2.249139 | CGGAGGGAGTATTTAGGGGAG | 58.751 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
2538 | 3904 | 1.969208 | GACGGAGGGAGTATTTAGGGG | 59.031 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
2539 | 3905 | 1.969208 | GGACGGAGGGAGTATTTAGGG | 59.031 | 57.143 | 0.00 | 0.00 | 0.00 | 3.53 |
2540 | 3906 | 2.674420 | TGGACGGAGGGAGTATTTAGG | 58.326 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
2541 | 3907 | 4.957684 | ATTGGACGGAGGGAGTATTTAG | 57.042 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
2542 | 3908 | 6.328148 | ACATTATTGGACGGAGGGAGTATTTA | 59.672 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
2544 | 3910 | 4.658901 | ACATTATTGGACGGAGGGAGTATT | 59.341 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
2546 | 3912 | 3.649843 | ACATTATTGGACGGAGGGAGTA | 58.350 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
2547 | 3913 | 2.478292 | ACATTATTGGACGGAGGGAGT | 58.522 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2548 | 3914 | 4.344102 | TCTTACATTATTGGACGGAGGGAG | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
2549 | 3915 | 4.100498 | GTCTTACATTATTGGACGGAGGGA | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
2551 | 3917 | 4.049186 | CGTCTTACATTATTGGACGGAGG | 58.951 | 47.826 | 0.00 | 0.00 | 43.69 | 4.30 |
2557 | 3923 | 7.226918 | TGTCACAAAACGTCTTACATTATTGGA | 59.773 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
2558 | 3924 | 7.322699 | GTGTCACAAAACGTCTTACATTATTGG | 59.677 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
2559 | 3925 | 8.067784 | AGTGTCACAAAACGTCTTACATTATTG | 58.932 | 33.333 | 5.62 | 0.00 | 0.00 | 1.90 |
2560 | 3926 | 8.149973 | AGTGTCACAAAACGTCTTACATTATT | 57.850 | 30.769 | 5.62 | 0.00 | 0.00 | 1.40 |
2562 | 3928 | 8.821147 | ATAGTGTCACAAAACGTCTTACATTA | 57.179 | 30.769 | 5.62 | 0.00 | 0.00 | 1.90 |
2563 | 3929 | 7.724305 | ATAGTGTCACAAAACGTCTTACATT | 57.276 | 32.000 | 5.62 | 0.00 | 0.00 | 2.71 |
2565 | 3931 | 8.821147 | AATATAGTGTCACAAAACGTCTTACA | 57.179 | 30.769 | 5.62 | 0.00 | 0.00 | 2.41 |
2597 | 3963 | 5.074804 | GGCCCATAATATAGGACGGTTTTT | 58.925 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
2598 | 3964 | 4.659115 | GGCCCATAATATAGGACGGTTTT | 58.341 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
2599 | 3965 | 4.296621 | GGCCCATAATATAGGACGGTTT | 57.703 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
2600 | 3966 | 3.994931 | GGCCCATAATATAGGACGGTT | 57.005 | 47.619 | 0.00 | 0.00 | 0.00 | 4.44 |
2604 | 3970 | 3.105283 | ACTCCGGCCCATAATATAGGAC | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2605 | 3971 | 3.104512 | CACTCCGGCCCATAATATAGGA | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
2606 | 3972 | 3.104512 | TCACTCCGGCCCATAATATAGG | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2607 | 3973 | 3.769844 | ACTCACTCCGGCCCATAATATAG | 59.230 | 47.826 | 0.00 | 0.00 | 0.00 | 1.31 |
2608 | 3974 | 3.786553 | ACTCACTCCGGCCCATAATATA | 58.213 | 45.455 | 0.00 | 0.00 | 0.00 | 0.86 |
2609 | 3975 | 2.621070 | ACTCACTCCGGCCCATAATAT | 58.379 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
2610 | 3976 | 2.097110 | ACTCACTCCGGCCCATAATA | 57.903 | 50.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2611 | 3977 | 2.097110 | TACTCACTCCGGCCCATAAT | 57.903 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2612 | 3978 | 2.097110 | ATACTCACTCCGGCCCATAA | 57.903 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2613 | 3979 | 2.984435 | TATACTCACTCCGGCCCATA | 57.016 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2614 | 3980 | 1.971357 | CTTATACTCACTCCGGCCCAT | 59.029 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
2615 | 3981 | 1.342674 | ACTTATACTCACTCCGGCCCA | 60.343 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
2616 | 3982 | 1.340568 | GACTTATACTCACTCCGGCCC | 59.659 | 57.143 | 0.00 | 0.00 | 0.00 | 5.80 |
2617 | 3983 | 2.308690 | AGACTTATACTCACTCCGGCC | 58.691 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
2618 | 3984 | 4.388378 | AAAGACTTATACTCACTCCGGC | 57.612 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
2619 | 3985 | 7.701501 | GTCTAAAAAGACTTATACTCACTCCGG | 59.298 | 40.741 | 0.00 | 0.00 | 36.01 | 5.14 |
2620 | 3986 | 8.242053 | TGTCTAAAAAGACTTATACTCACTCCG | 58.758 | 37.037 | 7.04 | 0.00 | 39.41 | 4.63 |
2650 | 4016 | 4.209307 | TCCGCATGTTGTAGTCCATTTA | 57.791 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
2698 | 4064 | 7.537991 | CGCTCTTATATTAGTTTACGGAGGAAG | 59.462 | 40.741 | 0.00 | 0.00 | 0.00 | 3.46 |
2699 | 4065 | 7.013655 | ACGCTCTTATATTAGTTTACGGAGGAA | 59.986 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
2700 | 4066 | 6.488006 | ACGCTCTTATATTAGTTTACGGAGGA | 59.512 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
2701 | 4067 | 6.675987 | ACGCTCTTATATTAGTTTACGGAGG | 58.324 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2702 | 4068 | 8.571461 | AAACGCTCTTATATTAGTTTACGGAG | 57.429 | 34.615 | 0.00 | 0.00 | 31.14 | 4.63 |
2703 | 4069 | 9.669353 | CTAAACGCTCTTATATTAGTTTACGGA | 57.331 | 33.333 | 0.00 | 0.00 | 34.29 | 4.69 |
2704 | 4070 | 9.669353 | TCTAAACGCTCTTATATTAGTTTACGG | 57.331 | 33.333 | 0.00 | 0.00 | 34.29 | 4.02 |
2718 | 4084 | 9.654663 | AACTATTTTAGTGATCTAAACGCTCTT | 57.345 | 29.630 | 0.00 | 0.00 | 43.20 | 2.85 |
2731 | 4097 | 9.339850 | AGAGCGTCTAGATAACTATTTTAGTGA | 57.660 | 33.333 | 0.00 | 0.00 | 39.39 | 3.41 |
2732 | 4098 | 9.953697 | AAGAGCGTCTAGATAACTATTTTAGTG | 57.046 | 33.333 | 0.00 | 0.00 | 39.39 | 2.74 |
2749 | 4115 | 8.569641 | CCTCTGTAAACTAATATAAGAGCGTCT | 58.430 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
2750 | 4116 | 7.808856 | CCCTCTGTAAACTAATATAAGAGCGTC | 59.191 | 40.741 | 0.00 | 0.00 | 0.00 | 5.19 |
2751 | 4117 | 7.504911 | TCCCTCTGTAAACTAATATAAGAGCGT | 59.495 | 37.037 | 0.00 | 0.00 | 0.00 | 5.07 |
2752 | 4118 | 7.883217 | TCCCTCTGTAAACTAATATAAGAGCG | 58.117 | 38.462 | 0.00 | 0.00 | 0.00 | 5.03 |
2753 | 4119 | 8.862085 | ACTCCCTCTGTAAACTAATATAAGAGC | 58.138 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
2760 | 4126 | 9.064706 | CGAATCTACTCCCTCTGTAAACTAATA | 57.935 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2761 | 4127 | 7.470286 | GCGAATCTACTCCCTCTGTAAACTAAT | 60.470 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
2762 | 4128 | 6.183360 | GCGAATCTACTCCCTCTGTAAACTAA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
2763 | 4129 | 5.298777 | GCGAATCTACTCCCTCTGTAAACTA | 59.701 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2764 | 4130 | 4.098196 | GCGAATCTACTCCCTCTGTAAACT | 59.902 | 45.833 | 0.00 | 0.00 | 0.00 | 2.66 |
2765 | 4131 | 4.098196 | AGCGAATCTACTCCCTCTGTAAAC | 59.902 | 45.833 | 0.00 | 0.00 | 0.00 | 2.01 |
2766 | 4132 | 4.279145 | AGCGAATCTACTCCCTCTGTAAA | 58.721 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
2767 | 4133 | 3.884091 | GAGCGAATCTACTCCCTCTGTAA | 59.116 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
2768 | 4134 | 3.118000 | TGAGCGAATCTACTCCCTCTGTA | 60.118 | 47.826 | 0.00 | 0.00 | 31.65 | 2.74 |
2769 | 4135 | 2.303175 | GAGCGAATCTACTCCCTCTGT | 58.697 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2770 | 4136 | 2.034053 | GTGAGCGAATCTACTCCCTCTG | 59.966 | 54.545 | 0.00 | 0.00 | 31.65 | 3.35 |
2771 | 4137 | 2.092103 | AGTGAGCGAATCTACTCCCTCT | 60.092 | 50.000 | 0.00 | 0.00 | 31.65 | 3.69 |
2772 | 4138 | 2.303175 | AGTGAGCGAATCTACTCCCTC | 58.697 | 52.381 | 0.00 | 0.00 | 31.65 | 4.30 |
2773 | 4139 | 2.445682 | AGTGAGCGAATCTACTCCCT | 57.554 | 50.000 | 0.00 | 0.00 | 31.65 | 4.20 |
2774 | 4140 | 3.190874 | CAAAGTGAGCGAATCTACTCCC | 58.809 | 50.000 | 0.00 | 0.00 | 31.65 | 4.30 |
2775 | 4141 | 2.605366 | GCAAAGTGAGCGAATCTACTCC | 59.395 | 50.000 | 0.00 | 0.00 | 31.65 | 3.85 |
2776 | 4142 | 3.516615 | AGCAAAGTGAGCGAATCTACTC | 58.483 | 45.455 | 0.00 | 0.00 | 37.01 | 2.59 |
2777 | 4143 | 3.516615 | GAGCAAAGTGAGCGAATCTACT | 58.483 | 45.455 | 0.00 | 0.00 | 37.01 | 2.57 |
2778 | 4144 | 2.605366 | GGAGCAAAGTGAGCGAATCTAC | 59.395 | 50.000 | 0.00 | 0.00 | 37.01 | 2.59 |
2779 | 4145 | 2.735444 | CGGAGCAAAGTGAGCGAATCTA | 60.735 | 50.000 | 0.00 | 0.00 | 37.01 | 1.98 |
2780 | 4146 | 1.731720 | GGAGCAAAGTGAGCGAATCT | 58.268 | 50.000 | 0.00 | 0.00 | 37.01 | 2.40 |
2791 | 4157 | 4.111375 | AGTGACTACATACGGAGCAAAG | 57.889 | 45.455 | 0.00 | 0.00 | 0.00 | 2.77 |
2802 | 4168 | 4.929808 | GTCGATTCCAACAAGTGACTACAT | 59.070 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2822 | 4188 | 6.369059 | TCCTCCGTTTCTAAGTATAAGTCG | 57.631 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
2831 | 4205 | 3.128242 | TCGCTACTTCCTCCGTTTCTAAG | 59.872 | 47.826 | 0.00 | 0.00 | 0.00 | 2.18 |
2835 | 4209 | 1.910688 | CTCGCTACTTCCTCCGTTTC | 58.089 | 55.000 | 0.00 | 0.00 | 0.00 | 2.78 |
2845 | 4219 | 2.283298 | CCATCATGTTGCTCGCTACTT | 58.717 | 47.619 | 5.21 | 0.00 | 0.00 | 2.24 |
2851 | 4225 | 3.770263 | ATTGAACCATCATGTTGCTCG | 57.230 | 42.857 | 0.00 | 0.00 | 34.96 | 5.03 |
2860 | 4263 | 7.148255 | GCTACTGTGAATTGTATTGAACCATCA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 3.07 |
2923 | 4326 | 3.927481 | GACAAGCCCACCCTCAGCC | 62.927 | 68.421 | 0.00 | 0.00 | 0.00 | 4.85 |
2950 | 4353 | 4.905429 | TGGATGAGCTAGCAAAGTAACAA | 58.095 | 39.130 | 18.83 | 0.00 | 0.00 | 2.83 |
2959 | 4362 | 3.036819 | ACAATCTCTGGATGAGCTAGCA | 58.963 | 45.455 | 18.83 | 0.00 | 42.38 | 3.49 |
2972 | 4375 | 4.342665 | GGAGGTAGAATCCGAACAATCTCT | 59.657 | 45.833 | 0.00 | 0.00 | 0.00 | 3.10 |
3100 | 4515 | 4.613944 | TGCAGCAAAAACAATCTGAAGAG | 58.386 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.