Multiple sequence alignment - TraesCS7B01G174700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G174700 chr7B 100.000 5909 0 0 1 5909 245672433 245678341 0.000000e+00 10912.0
1 TraesCS7B01G174700 chr7B 81.169 154 27 2 1 152 589760070 589759917 8.040000e-24 122.0
2 TraesCS7B01G174700 chr7B 81.746 126 22 1 2624 2749 323201373 323201497 2.910000e-18 104.0
3 TraesCS7B01G174700 chr7B 94.340 53 3 0 5730 5782 245678111 245678163 1.360000e-11 82.4
4 TraesCS7B01G174700 chr7B 94.340 53 3 0 5679 5731 245678162 245678214 1.360000e-11 82.4
5 TraesCS7B01G174700 chr7D 93.880 4951 141 42 680 5533 265260186 265265071 0.000000e+00 7315.0
6 TraesCS7B01G174700 chr7D 87.798 377 16 6 215 567 265259526 265259896 1.180000e-111 414.0
7 TraesCS7B01G174700 chr7D 81.967 122 21 1 2628 2749 363553541 363553661 1.050000e-17 102.0
8 TraesCS7B01G174700 chr7D 89.655 58 5 1 3 59 560251209 560251152 8.210000e-09 73.1
9 TraesCS7B01G174700 chr7A 93.061 3718 158 38 1617 5266 290284542 290288227 0.000000e+00 5345.0
10 TraesCS7B01G174700 chr7A 88.847 529 21 17 564 1086 290283349 290283845 3.030000e-172 616.0
11 TraesCS7B01G174700 chr7A 87.184 515 30 18 5245 5731 290290346 290290852 2.410000e-153 553.0
12 TraesCS7B01G174700 chr7A 92.222 180 11 3 391 567 290283214 290283393 9.830000e-63 252.0
13 TraesCS7B01G174700 chr7A 88.889 153 10 2 199 350 290282736 290282882 1.310000e-41 182.0
14 TraesCS7B01G174700 chr7A 89.362 94 10 0 5730 5823 290290800 290290893 1.040000e-22 119.0
15 TraesCS7B01G174700 chr5B 74.398 664 133 27 1814 2453 546847371 546848021 3.540000e-62 250.0
16 TraesCS7B01G174700 chr5B 79.736 227 38 7 2932 3150 546848634 546848860 2.200000e-34 158.0
17 TraesCS7B01G174700 chr5B 88.172 93 10 1 2647 2739 347687493 347687584 6.260000e-20 110.0
18 TraesCS7B01G174700 chr5A 73.906 663 139 24 1814 2453 565769285 565769936 9.900000e-58 235.0
19 TraesCS7B01G174700 chr5A 79.295 227 38 8 2932 3150 565770472 565770697 3.690000e-32 150.0
20 TraesCS7B01G174700 chr5D 73.946 664 134 27 1814 2453 447891084 447891732 1.280000e-56 231.0
21 TraesCS7B01G174700 chr5D 78.070 228 41 7 2932 3150 447892229 447892456 1.030000e-27 135.0
22 TraesCS7B01G174700 chr5D 90.909 55 4 1 3 56 286932055 286932109 8.210000e-09 73.1
23 TraesCS7B01G174700 chr3D 85.714 168 23 1 1 167 518315969 518315802 6.090000e-40 176.0
24 TraesCS7B01G174700 chr3D 89.831 59 6 0 3 61 330267014 330267072 6.350000e-10 76.8
25 TraesCS7B01G174700 chr2D 81.879 149 23 4 1 146 45102899 45103046 8.040000e-24 122.0
26 TraesCS7B01G174700 chr2D 91.525 59 5 0 2 60 164747624 164747566 1.360000e-11 82.4
27 TraesCS7B01G174700 chr2B 78.610 187 33 7 2512 2694 186464715 186464898 3.740000e-22 117.0
28 TraesCS7B01G174700 chr2B 78.295 129 24 3 2569 2695 139796497 139796623 4.910000e-11 80.5
29 TraesCS7B01G174700 chr1D 93.443 61 4 0 2627 2687 389215248 389215308 2.270000e-14 91.6
30 TraesCS7B01G174700 chr4B 81.308 107 12 6 2570 2673 486271228 486271329 4.910000e-11 80.5
31 TraesCS7B01G174700 chr3B 84.091 88 5 2 1 88 389502139 389502061 6.350000e-10 76.8
32 TraesCS7B01G174700 chr6B 88.333 60 7 0 1 60 346711990 346711931 8.210000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G174700 chr7B 245672433 245678341 5908 False 3692.266667 10912 96.226667 1 5909 3 chr7B.!!$F2 5908
1 TraesCS7B01G174700 chr7D 265259526 265265071 5545 False 3864.500000 7315 90.839000 215 5533 2 chr7D.!!$F2 5318
2 TraesCS7B01G174700 chr7A 290282736 290290893 8157 False 1177.833333 5345 89.927500 199 5823 6 chr7A.!!$F1 5624
3 TraesCS7B01G174700 chr5B 546847371 546848860 1489 False 204.000000 250 77.067000 1814 3150 2 chr5B.!!$F2 1336

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.041576 GACTTTGGCCGACGTTTGAC 60.042 55.0 3.17 0.00 0.00 3.18 F
82 83 0.108041 AATTTCGGCCACGTCGGTAT 60.108 50.0 2.24 0.00 41.85 2.73 F
155 156 0.249699 ACGCACGTCCACTTGATCAA 60.250 50.0 8.12 8.12 0.00 2.57 F
589 890 0.389025 TGCAAAGCAGAGTGAGACGA 59.611 50.0 0.00 0.00 33.32 4.20 F
710 1226 0.539518 GTCTTCCCCCTTCTCTCTGC 59.460 60.0 0.00 0.00 0.00 4.26 F
833 1349 0.603975 GTGTGTGAGTGGGAAGAGGC 60.604 60.0 0.00 0.00 0.00 4.70 F
2615 3523 0.330604 ACTTCTGTCATGCCCATGCT 59.669 50.0 3.41 0.00 38.65 3.79 F
2856 3846 0.112412 ACCAAAAGAACAGGCCGGAT 59.888 50.0 10.86 0.00 0.00 4.18 F
4554 5573 0.178068 GGTATGTGTCGGTGGCATCT 59.822 55.0 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1937 2703 2.748388 ACCACAGGAGTGTAGATACCC 58.252 52.381 0.0 0.0 44.39 3.69 R
2299 3076 7.004555 TCTTCTTCTTAGTGGTTGCATTCTA 57.995 36.000 0.0 0.0 0.00 2.10 R
2365 3148 3.380637 CAGATTTCCTGCAATCCTCCTTG 59.619 47.826 0.0 0.0 35.89 3.61 R
2596 3504 0.330604 AGCATGGGCATGACAGAAGT 59.669 50.000 0.0 0.0 44.61 3.01 R
2600 3508 1.027357 GGTTAGCATGGGCATGACAG 58.973 55.000 0.0 0.0 44.61 3.51 R
2840 3830 2.420058 CCTATCCGGCCTGTTCTTTT 57.580 50.000 0.0 0.0 0.00 2.27 R
4636 5655 0.244721 GCAAGATTTCTGCCACCACC 59.755 55.000 0.0 0.0 0.00 4.61 R
4771 5790 1.177401 GTGTTGCCCTCATTCCTTCC 58.823 55.000 0.0 0.0 0.00 3.46 R
5882 9100 0.729690 GCTCGGACCTTGATCTTTGC 59.270 55.000 0.0 0.0 0.00 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.950909 TGTTTAAGTGGACTTTGGCCG 59.049 47.619 0.00 0.00 37.40 6.13
21 22 2.223745 GTTTAAGTGGACTTTGGCCGA 58.776 47.619 0.00 0.00 37.40 5.54
22 23 1.886886 TTAAGTGGACTTTGGCCGAC 58.113 50.000 0.00 0.00 37.40 4.79
23 24 0.320073 TAAGTGGACTTTGGCCGACG 60.320 55.000 0.00 0.00 37.40 5.12
24 25 2.280592 GTGGACTTTGGCCGACGT 60.281 61.111 0.73 0.73 0.00 4.34
25 26 1.890510 GTGGACTTTGGCCGACGTT 60.891 57.895 3.17 0.00 0.00 3.99
26 27 1.153127 TGGACTTTGGCCGACGTTT 60.153 52.632 3.17 0.00 0.00 3.60
27 28 1.281656 GGACTTTGGCCGACGTTTG 59.718 57.895 3.17 0.00 0.00 2.93
28 29 1.161563 GGACTTTGGCCGACGTTTGA 61.162 55.000 3.17 0.00 0.00 2.69
29 30 0.041576 GACTTTGGCCGACGTTTGAC 60.042 55.000 3.17 0.00 0.00 3.18
30 31 1.281656 CTTTGGCCGACGTTTGACC 59.718 57.895 0.00 0.00 0.00 4.02
31 32 2.438385 CTTTGGCCGACGTTTGACCG 62.438 60.000 0.00 0.00 0.00 4.79
32 33 4.973055 TGGCCGACGTTTGACCGG 62.973 66.667 8.18 8.18 45.51 5.28
35 36 4.973055 CCGACGTTTGACCGGCCA 62.973 66.667 0.00 0.00 36.62 5.36
36 37 2.740826 CGACGTTTGACCGGCCAT 60.741 61.111 0.00 0.00 29.99 4.40
37 38 2.322081 CGACGTTTGACCGGCCATT 61.322 57.895 0.00 0.00 29.99 3.16
38 39 1.847890 CGACGTTTGACCGGCCATTT 61.848 55.000 0.00 0.00 29.99 2.32
39 40 1.158434 GACGTTTGACCGGCCATTTA 58.842 50.000 0.00 0.00 0.00 1.40
40 41 1.741145 GACGTTTGACCGGCCATTTAT 59.259 47.619 0.00 0.00 0.00 1.40
41 42 1.470890 ACGTTTGACCGGCCATTTATG 59.529 47.619 0.00 0.00 0.00 1.90
42 43 1.470890 CGTTTGACCGGCCATTTATGT 59.529 47.619 0.00 0.00 0.00 2.29
43 44 2.678836 CGTTTGACCGGCCATTTATGTA 59.321 45.455 0.00 0.00 0.00 2.29
44 45 3.486209 CGTTTGACCGGCCATTTATGTAC 60.486 47.826 0.00 0.00 0.00 2.90
45 46 3.351794 TTGACCGGCCATTTATGTACA 57.648 42.857 0.00 0.00 0.00 2.90
46 47 3.351794 TGACCGGCCATTTATGTACAA 57.648 42.857 0.00 0.00 0.00 2.41
47 48 3.892284 TGACCGGCCATTTATGTACAAT 58.108 40.909 0.00 0.00 0.00 2.71
48 49 4.274147 TGACCGGCCATTTATGTACAATT 58.726 39.130 0.00 0.00 0.00 2.32
49 50 5.437946 TGACCGGCCATTTATGTACAATTA 58.562 37.500 0.00 0.00 0.00 1.40
50 51 6.065374 TGACCGGCCATTTATGTACAATTAT 58.935 36.000 0.00 0.00 0.00 1.28
51 52 6.016693 TGACCGGCCATTTATGTACAATTATG 60.017 38.462 0.00 3.70 0.00 1.90
52 53 5.160641 CCGGCCATTTATGTACAATTATGC 58.839 41.667 2.24 0.00 0.00 3.14
53 54 5.048083 CCGGCCATTTATGTACAATTATGCT 60.048 40.000 2.24 0.00 0.00 3.79
54 55 6.446318 CGGCCATTTATGTACAATTATGCTT 58.554 36.000 2.24 0.00 0.00 3.91
55 56 7.308891 CCGGCCATTTATGTACAATTATGCTTA 60.309 37.037 2.24 0.00 0.00 3.09
56 57 8.079203 CGGCCATTTATGTACAATTATGCTTAA 58.921 33.333 2.24 0.00 0.00 1.85
57 58 9.927668 GGCCATTTATGTACAATTATGCTTAAT 57.072 29.630 0.00 0.00 0.00 1.40
69 70 9.009327 ACAATTATGCTTAATTCGTCAATTTCG 57.991 29.630 13.18 3.48 36.16 3.46
70 71 8.471457 CAATTATGCTTAATTCGTCAATTTCGG 58.529 33.333 13.18 0.00 36.16 4.30
71 72 3.753842 TGCTTAATTCGTCAATTTCGGC 58.246 40.909 0.94 0.00 33.95 5.54
72 73 3.105937 GCTTAATTCGTCAATTTCGGCC 58.894 45.455 0.00 0.00 33.95 6.13
73 74 3.426963 GCTTAATTCGTCAATTTCGGCCA 60.427 43.478 2.24 0.00 33.95 5.36
74 75 2.629639 AATTCGTCAATTTCGGCCAC 57.370 45.000 2.24 0.00 0.00 5.01
75 76 0.446222 ATTCGTCAATTTCGGCCACG 59.554 50.000 2.24 2.86 42.74 4.94
76 77 0.881159 TTCGTCAATTTCGGCCACGT 60.881 50.000 2.24 0.00 41.85 4.49
77 78 1.131826 CGTCAATTTCGGCCACGTC 59.868 57.895 2.24 0.00 41.85 4.34
78 79 1.131826 GTCAATTTCGGCCACGTCG 59.868 57.895 2.24 0.00 41.85 5.12
79 80 2.030401 TCAATTTCGGCCACGTCGG 61.030 57.895 2.24 0.00 41.85 4.79
80 81 2.031465 AATTTCGGCCACGTCGGT 59.969 55.556 2.24 0.00 41.85 4.69
81 82 1.015085 CAATTTCGGCCACGTCGGTA 61.015 55.000 2.24 0.00 41.85 4.02
82 83 0.108041 AATTTCGGCCACGTCGGTAT 60.108 50.000 2.24 0.00 41.85 2.73
83 84 0.746063 ATTTCGGCCACGTCGGTATA 59.254 50.000 2.24 0.00 41.85 1.47
84 85 0.529833 TTTCGGCCACGTCGGTATAA 59.470 50.000 2.24 0.00 41.85 0.98
85 86 0.529833 TTCGGCCACGTCGGTATAAA 59.470 50.000 2.24 0.00 41.85 1.40
86 87 0.746063 TCGGCCACGTCGGTATAAAT 59.254 50.000 2.24 0.00 41.85 1.40
87 88 0.856641 CGGCCACGTCGGTATAAATG 59.143 55.000 2.24 0.00 36.97 2.32
88 89 1.536496 CGGCCACGTCGGTATAAATGA 60.536 52.381 2.24 0.00 36.97 2.57
89 90 2.553086 GGCCACGTCGGTATAAATGAA 58.447 47.619 0.00 0.00 36.97 2.57
90 91 2.286025 GGCCACGTCGGTATAAATGAAC 59.714 50.000 0.00 0.00 36.97 3.18
91 92 2.286025 GCCACGTCGGTATAAATGAACC 59.714 50.000 0.00 0.00 36.97 3.62
99 100 2.546789 GGTATAAATGAACCGGCCTTCG 59.453 50.000 0.00 0.00 38.88 3.79
100 101 2.702592 ATAAATGAACCGGCCTTCGA 57.297 45.000 0.00 0.00 42.43 3.71
101 102 2.702592 TAAATGAACCGGCCTTCGAT 57.297 45.000 0.00 0.00 42.43 3.59
102 103 1.094785 AAATGAACCGGCCTTCGATG 58.905 50.000 0.00 0.00 42.43 3.84
103 104 0.748005 AATGAACCGGCCTTCGATGG 60.748 55.000 12.90 12.90 42.43 3.51
104 105 2.513897 GAACCGGCCTTCGATGGG 60.514 66.667 18.22 9.71 42.43 4.00
111 112 4.473520 CCTTCGATGGGCGCACCT 62.474 66.667 7.46 0.00 41.11 4.00
112 113 3.197790 CTTCGATGGGCGCACCTG 61.198 66.667 7.46 0.00 41.11 4.00
113 114 3.958147 CTTCGATGGGCGCACCTGT 62.958 63.158 7.46 0.00 41.11 4.00
114 115 3.950794 TTCGATGGGCGCACCTGTC 62.951 63.158 7.46 8.72 41.11 3.51
116 117 4.451150 GATGGGCGCACCTGTCGA 62.451 66.667 7.46 0.00 41.11 4.20
117 118 4.760047 ATGGGCGCACCTGTCGAC 62.760 66.667 7.46 9.11 41.11 4.20
122 123 2.355363 CGCACCTGTCGACCGAAA 60.355 61.111 14.12 0.00 0.00 3.46
123 124 1.736645 CGCACCTGTCGACCGAAAT 60.737 57.895 14.12 0.00 0.00 2.17
124 125 0.457166 CGCACCTGTCGACCGAAATA 60.457 55.000 14.12 0.00 0.00 1.40
125 126 1.717194 GCACCTGTCGACCGAAATAA 58.283 50.000 14.12 0.00 0.00 1.40
126 127 2.070783 GCACCTGTCGACCGAAATAAA 58.929 47.619 14.12 0.00 0.00 1.40
127 128 2.481185 GCACCTGTCGACCGAAATAAAA 59.519 45.455 14.12 0.00 0.00 1.52
128 129 3.058777 GCACCTGTCGACCGAAATAAAAA 60.059 43.478 14.12 0.00 0.00 1.94
143 144 2.473457 AAAAACCAGACACGCACGT 58.527 47.368 0.00 0.00 0.00 4.49
144 145 0.375803 AAAAACCAGACACGCACGTC 59.624 50.000 0.00 0.00 36.08 4.34
145 146 1.433837 AAAACCAGACACGCACGTCC 61.434 55.000 0.00 0.00 36.52 4.79
146 147 2.581208 AAACCAGACACGCACGTCCA 62.581 55.000 0.00 0.00 36.52 4.02
147 148 3.036084 CCAGACACGCACGTCCAC 61.036 66.667 0.00 0.00 36.52 4.02
148 149 2.027605 CAGACACGCACGTCCACT 59.972 61.111 0.00 0.00 36.52 4.00
149 150 1.591594 CAGACACGCACGTCCACTT 60.592 57.895 0.00 0.00 36.52 3.16
150 151 1.591594 AGACACGCACGTCCACTTG 60.592 57.895 0.00 0.00 36.52 3.16
151 152 1.590525 GACACGCACGTCCACTTGA 60.591 57.895 0.00 0.00 0.00 3.02
152 153 0.944311 GACACGCACGTCCACTTGAT 60.944 55.000 0.00 0.00 0.00 2.57
153 154 0.944311 ACACGCACGTCCACTTGATC 60.944 55.000 0.00 0.00 0.00 2.92
154 155 0.943835 CACGCACGTCCACTTGATCA 60.944 55.000 0.00 0.00 0.00 2.92
155 156 0.249699 ACGCACGTCCACTTGATCAA 60.250 50.000 8.12 8.12 0.00 2.57
156 157 0.865111 CGCACGTCCACTTGATCAAA 59.135 50.000 9.88 0.00 0.00 2.69
157 158 1.398451 CGCACGTCCACTTGATCAAAC 60.398 52.381 9.88 3.82 0.00 2.93
158 159 1.069227 GCACGTCCACTTGATCAAACC 60.069 52.381 9.88 0.00 0.00 3.27
159 160 2.217750 CACGTCCACTTGATCAAACCA 58.782 47.619 9.88 0.00 0.00 3.67
160 161 2.616376 CACGTCCACTTGATCAAACCAA 59.384 45.455 9.88 0.00 0.00 3.67
161 162 2.878406 ACGTCCACTTGATCAAACCAAG 59.122 45.455 9.88 0.00 44.75 3.61
162 163 2.350772 CGTCCACTTGATCAAACCAAGC 60.351 50.000 9.88 0.00 43.45 4.01
163 164 1.879380 TCCACTTGATCAAACCAAGCG 59.121 47.619 9.88 0.00 43.45 4.68
164 165 1.608590 CCACTTGATCAAACCAAGCGT 59.391 47.619 9.88 0.00 43.45 5.07
165 166 2.811431 CCACTTGATCAAACCAAGCGTA 59.189 45.455 9.88 0.00 43.45 4.42
166 167 3.364964 CCACTTGATCAAACCAAGCGTAC 60.365 47.826 9.88 0.00 43.45 3.67
167 168 3.498397 CACTTGATCAAACCAAGCGTACT 59.502 43.478 9.88 0.00 43.45 2.73
168 169 4.024048 CACTTGATCAAACCAAGCGTACTT 60.024 41.667 9.88 0.00 43.45 2.24
169 170 4.578928 ACTTGATCAAACCAAGCGTACTTT 59.421 37.500 9.88 0.00 43.45 2.66
170 171 4.742438 TGATCAAACCAAGCGTACTTTC 57.258 40.909 0.00 0.00 32.29 2.62
171 172 4.130857 TGATCAAACCAAGCGTACTTTCA 58.869 39.130 0.00 0.00 32.29 2.69
172 173 4.759693 TGATCAAACCAAGCGTACTTTCAT 59.240 37.500 0.00 0.00 32.29 2.57
173 174 5.240623 TGATCAAACCAAGCGTACTTTCATT 59.759 36.000 0.00 0.00 32.29 2.57
174 175 5.508200 TCAAACCAAGCGTACTTTCATTT 57.492 34.783 0.00 0.00 32.29 2.32
175 176 5.277825 TCAAACCAAGCGTACTTTCATTTG 58.722 37.500 0.00 0.00 34.08 2.32
176 177 3.915437 ACCAAGCGTACTTTCATTTGG 57.085 42.857 0.00 0.00 40.59 3.28
177 178 2.556622 ACCAAGCGTACTTTCATTTGGG 59.443 45.455 6.09 0.00 39.42 4.12
178 179 2.556622 CCAAGCGTACTTTCATTTGGGT 59.443 45.455 0.00 0.00 32.29 4.51
179 180 3.365969 CCAAGCGTACTTTCATTTGGGTC 60.366 47.826 0.00 0.00 32.29 4.46
180 181 2.073816 AGCGTACTTTCATTTGGGTCG 58.926 47.619 0.00 0.00 0.00 4.79
181 182 1.129811 GCGTACTTTCATTTGGGTCGG 59.870 52.381 0.00 0.00 0.00 4.79
182 183 1.129811 CGTACTTTCATTTGGGTCGGC 59.870 52.381 0.00 0.00 0.00 5.54
183 184 1.129811 GTACTTTCATTTGGGTCGGCG 59.870 52.381 0.00 0.00 0.00 6.46
184 185 1.154035 CTTTCATTTGGGTCGGCGC 60.154 57.895 0.00 0.00 0.00 6.53
185 186 2.849142 CTTTCATTTGGGTCGGCGCG 62.849 60.000 0.00 0.00 0.00 6.86
194 195 4.520846 GTCGGCGCGCTGGAATTG 62.521 66.667 37.26 15.47 0.00 2.32
197 198 4.543084 GGCGCGCTGGAATTGCTC 62.543 66.667 32.29 5.91 0.00 4.26
208 209 2.945008 TGGAATTGCTCTAATTGCTCCG 59.055 45.455 0.00 0.00 44.60 4.63
210 211 3.242870 GGAATTGCTCTAATTGCTCCGTG 60.243 47.826 0.00 0.00 42.04 4.94
278 282 6.272318 TCGGATTGTTTGATTAATTCCATGC 58.728 36.000 0.00 0.00 0.00 4.06
279 283 6.041511 CGGATTGTTTGATTAATTCCATGCA 58.958 36.000 0.00 0.00 0.00 3.96
280 284 6.702723 CGGATTGTTTGATTAATTCCATGCAT 59.297 34.615 0.00 0.00 0.00 3.96
281 285 7.866898 CGGATTGTTTGATTAATTCCATGCATA 59.133 33.333 0.00 0.00 0.00 3.14
282 286 9.715121 GGATTGTTTGATTAATTCCATGCATAT 57.285 29.630 0.00 0.00 0.00 1.78
333 337 4.879686 CGCGCGGCCCGTTTATTG 62.880 66.667 24.84 0.00 39.71 1.90
345 349 3.059188 CCCGTTTATTGACGCCATATCAC 60.059 47.826 0.00 0.00 41.50 3.06
410 705 7.400052 ACAGGAAAATCCAACCTATATTTGCTT 59.600 33.333 0.00 0.00 39.61 3.91
470 765 3.689224 CGTGGTACGTAGTCCTGTG 57.311 57.895 0.00 0.00 43.93 3.66
563 864 2.300437 AGTGAGACGAGGAGGGAAAAAG 59.700 50.000 0.00 0.00 0.00 2.27
564 865 2.299297 GTGAGACGAGGAGGGAAAAAGA 59.701 50.000 0.00 0.00 0.00 2.52
565 866 2.969950 TGAGACGAGGAGGGAAAAAGAA 59.030 45.455 0.00 0.00 0.00 2.52
566 867 3.389983 TGAGACGAGGAGGGAAAAAGAAA 59.610 43.478 0.00 0.00 0.00 2.52
567 868 4.041691 TGAGACGAGGAGGGAAAAAGAAAT 59.958 41.667 0.00 0.00 0.00 2.17
568 869 5.247564 TGAGACGAGGAGGGAAAAAGAAATA 59.752 40.000 0.00 0.00 0.00 1.40
569 870 6.123045 AGACGAGGAGGGAAAAAGAAATAA 57.877 37.500 0.00 0.00 0.00 1.40
570 871 6.722328 AGACGAGGAGGGAAAAAGAAATAAT 58.278 36.000 0.00 0.00 0.00 1.28
571 872 6.599638 AGACGAGGAGGGAAAAAGAAATAATG 59.400 38.462 0.00 0.00 0.00 1.90
572 873 5.125578 ACGAGGAGGGAAAAAGAAATAATGC 59.874 40.000 0.00 0.00 0.00 3.56
573 874 5.125417 CGAGGAGGGAAAAAGAAATAATGCA 59.875 40.000 0.00 0.00 0.00 3.96
574 875 6.350110 CGAGGAGGGAAAAAGAAATAATGCAA 60.350 38.462 0.00 0.00 0.00 4.08
575 876 7.315066 AGGAGGGAAAAAGAAATAATGCAAA 57.685 32.000 0.00 0.00 0.00 3.68
576 877 7.389232 AGGAGGGAAAAAGAAATAATGCAAAG 58.611 34.615 0.00 0.00 0.00 2.77
577 878 6.092670 GGAGGGAAAAAGAAATAATGCAAAGC 59.907 38.462 0.00 0.00 0.00 3.51
578 879 6.532826 AGGGAAAAAGAAATAATGCAAAGCA 58.467 32.000 0.00 0.00 44.86 3.91
579 880 6.652062 AGGGAAAAAGAAATAATGCAAAGCAG 59.348 34.615 0.00 0.00 43.65 4.24
580 881 6.650390 GGGAAAAAGAAATAATGCAAAGCAGA 59.350 34.615 0.00 0.00 43.65 4.26
581 882 7.148523 GGGAAAAAGAAATAATGCAAAGCAGAG 60.149 37.037 0.00 0.00 43.65 3.35
582 883 7.386025 GGAAAAAGAAATAATGCAAAGCAGAGT 59.614 33.333 0.00 0.00 43.65 3.24
583 884 7.647907 AAAAGAAATAATGCAAAGCAGAGTG 57.352 32.000 0.00 0.00 43.65 3.51
584 885 6.579666 AAGAAATAATGCAAAGCAGAGTGA 57.420 33.333 0.00 0.00 43.65 3.41
585 886 6.192234 AGAAATAATGCAAAGCAGAGTGAG 57.808 37.500 0.00 0.00 43.65 3.51
586 887 5.942236 AGAAATAATGCAAAGCAGAGTGAGA 59.058 36.000 0.00 0.00 43.65 3.27
587 888 5.557891 AATAATGCAAAGCAGAGTGAGAC 57.442 39.130 0.00 0.00 43.65 3.36
588 889 1.436600 ATGCAAAGCAGAGTGAGACG 58.563 50.000 0.00 0.00 43.65 4.18
589 890 0.389025 TGCAAAGCAGAGTGAGACGA 59.611 50.000 0.00 0.00 33.32 4.20
590 891 1.066914 GCAAAGCAGAGTGAGACGAG 58.933 55.000 0.00 0.00 0.00 4.18
600 901 2.299297 GAGTGAGACGAGGAGGGAAAAA 59.701 50.000 0.00 0.00 0.00 1.94
630 931 1.625511 AAGAAAGGGGCAAAGCTCTG 58.374 50.000 0.00 0.00 0.00 3.35
642 943 4.030452 GCTCTGTGCCGCACAACC 62.030 66.667 25.64 13.45 44.08 3.77
681 982 5.779771 AGATGAGACTGAAACTCTCCTTCTT 59.220 40.000 0.00 0.00 34.33 2.52
700 1216 2.951229 TCTTTGACTTGTCTTCCCCC 57.049 50.000 2.35 0.00 0.00 5.40
702 1218 2.783510 TCTTTGACTTGTCTTCCCCCTT 59.216 45.455 2.35 0.00 0.00 3.95
703 1219 2.951229 TTGACTTGTCTTCCCCCTTC 57.049 50.000 2.35 0.00 0.00 3.46
704 1220 2.118403 TGACTTGTCTTCCCCCTTCT 57.882 50.000 2.35 0.00 0.00 2.85
705 1221 1.978580 TGACTTGTCTTCCCCCTTCTC 59.021 52.381 2.35 0.00 0.00 2.87
706 1222 2.261729 GACTTGTCTTCCCCCTTCTCT 58.738 52.381 0.00 0.00 0.00 3.10
707 1223 2.235155 GACTTGTCTTCCCCCTTCTCTC 59.765 54.545 0.00 0.00 0.00 3.20
708 1224 2.158081 ACTTGTCTTCCCCCTTCTCTCT 60.158 50.000 0.00 0.00 0.00 3.10
709 1225 1.944177 TGTCTTCCCCCTTCTCTCTG 58.056 55.000 0.00 0.00 0.00 3.35
710 1226 0.539518 GTCTTCCCCCTTCTCTCTGC 59.460 60.000 0.00 0.00 0.00 4.26
711 1227 0.972983 TCTTCCCCCTTCTCTCTGCG 60.973 60.000 0.00 0.00 0.00 5.18
712 1228 1.965754 CTTCCCCCTTCTCTCTGCGG 61.966 65.000 0.00 0.00 0.00 5.69
825 1341 1.336702 GCAGAGAGAGTGTGTGAGTGG 60.337 57.143 0.00 0.00 0.00 4.00
826 1342 1.271934 CAGAGAGAGTGTGTGAGTGGG 59.728 57.143 0.00 0.00 0.00 4.61
827 1343 1.145945 AGAGAGAGTGTGTGAGTGGGA 59.854 52.381 0.00 0.00 0.00 4.37
828 1344 1.964223 GAGAGAGTGTGTGAGTGGGAA 59.036 52.381 0.00 0.00 0.00 3.97
829 1345 1.967066 AGAGAGTGTGTGAGTGGGAAG 59.033 52.381 0.00 0.00 0.00 3.46
833 1349 0.603975 GTGTGTGAGTGGGAAGAGGC 60.604 60.000 0.00 0.00 0.00 4.70
855 1371 4.697828 GCTCCTTCTTCTCCGAATCTTTTT 59.302 41.667 0.00 0.00 0.00 1.94
856 1372 5.163804 GCTCCTTCTTCTCCGAATCTTTTTC 60.164 44.000 0.00 0.00 0.00 2.29
857 1373 6.115448 TCCTTCTTCTCCGAATCTTTTTCT 57.885 37.500 0.00 0.00 0.00 2.52
858 1374 6.534634 TCCTTCTTCTCCGAATCTTTTTCTT 58.465 36.000 0.00 0.00 0.00 2.52
859 1375 6.998673 TCCTTCTTCTCCGAATCTTTTTCTTT 59.001 34.615 0.00 0.00 0.00 2.52
860 1376 8.154856 TCCTTCTTCTCCGAATCTTTTTCTTTA 58.845 33.333 0.00 0.00 0.00 1.85
968 1484 2.170817 CAGGAAGAAACTAGGGTAGGGC 59.829 54.545 0.00 0.00 0.00 5.19
1206 1767 3.933332 CGTCCCTTCTTTTGTCTCCATAC 59.067 47.826 0.00 0.00 0.00 2.39
1212 1773 7.123847 TCCCTTCTTTTGTCTCCATACTAGTAC 59.876 40.741 4.31 0.00 0.00 2.73
1268 1891 2.225791 TAATGCTCGCGTGCTCCTGT 62.226 55.000 30.29 14.89 0.00 4.00
1269 1892 3.596066 ATGCTCGCGTGCTCCTGTT 62.596 57.895 30.29 8.64 0.00 3.16
1270 1893 3.044305 GCTCGCGTGCTCCTGTTT 61.044 61.111 24.65 0.00 0.00 2.83
1331 1955 1.067354 CAGCTCTGGGCCAATTTTGTC 60.067 52.381 8.04 0.00 43.05 3.18
1407 2120 8.887264 TTTATAGTCCCTGATTCCTCTATCTC 57.113 38.462 0.00 0.00 0.00 2.75
1565 2312 4.501915 CCCATGAAATCAAAACTGTGTGCT 60.502 41.667 0.00 0.00 0.00 4.40
1699 2463 4.276183 TCACCTTCTGCTATCGATAGTCAC 59.724 45.833 28.47 15.64 32.96 3.67
1734 2498 6.929606 TCTACTTGTTTTCTTACTCCAGCTTC 59.070 38.462 0.00 0.00 0.00 3.86
1748 2512 2.289444 CCAGCTTCTTTGGTTCGTCCTA 60.289 50.000 0.00 0.00 37.07 2.94
1937 2703 2.654749 TCCTTGAGTATGTCGCAGTG 57.345 50.000 0.00 0.00 0.00 3.66
2163 2940 5.123820 TCAATGCACCAGAAAGTAATACTGC 59.876 40.000 0.00 0.00 0.00 4.40
2299 3076 9.829507 GCTGCTGGAGATACAGATATAAATATT 57.170 33.333 0.00 0.00 40.97 1.28
2365 3148 5.523552 AGGCTTTATTTGTGCTTTGTTTGTC 59.476 36.000 0.00 0.00 0.00 3.18
2383 3166 2.108075 TGTCAAGGAGGATTGCAGGAAA 59.892 45.455 0.00 0.00 0.00 3.13
2487 3332 7.089770 TGTGCATGTTTAAGTTTGAACTGTA 57.910 32.000 0.00 0.00 39.66 2.74
2497 3342 6.882610 AAGTTTGAACTGTATGATTGCTCA 57.117 33.333 0.00 0.00 39.66 4.26
2520 3365 7.054124 TCATGTCTTGGATTAAGGGTATGTTC 58.946 38.462 0.00 0.00 37.01 3.18
2554 3399 4.991789 AAACCAACCCTGCCAATATTTT 57.008 36.364 0.00 0.00 0.00 1.82
2555 3400 3.979101 ACCAACCCTGCCAATATTTTG 57.021 42.857 0.00 0.00 0.00 2.44
2556 3401 3.247162 ACCAACCCTGCCAATATTTTGT 58.753 40.909 0.00 0.00 0.00 2.83
2559 3404 4.080975 CCAACCCTGCCAATATTTTGTCAT 60.081 41.667 0.00 0.00 0.00 3.06
2561 3406 6.275335 CAACCCTGCCAATATTTTGTCATAG 58.725 40.000 0.00 0.00 0.00 2.23
2565 3410 5.508489 CCTGCCAATATTTTGTCATAGCCAG 60.508 44.000 0.00 0.00 0.00 4.85
2568 3476 7.003482 TGCCAATATTTTGTCATAGCCAGATA 58.997 34.615 0.00 0.00 0.00 1.98
2615 3523 0.330604 ACTTCTGTCATGCCCATGCT 59.669 50.000 3.41 0.00 38.65 3.79
2690 3680 5.415221 CAAGCAAAACCTTGACCAAAGTTA 58.585 37.500 0.00 0.00 43.79 2.24
2696 3686 3.157087 ACCTTGACCAAAGTTATGGCTG 58.843 45.455 4.56 0.00 44.75 4.85
2840 3830 3.369052 CCGGATCTTGCTAACTTACACCA 60.369 47.826 0.00 0.00 0.00 4.17
2847 3837 7.023197 TCTTGCTAACTTACACCAAAAGAAC 57.977 36.000 0.00 0.00 0.00 3.01
2848 3838 6.600032 TCTTGCTAACTTACACCAAAAGAACA 59.400 34.615 0.00 0.00 0.00 3.18
2850 3840 5.298276 TGCTAACTTACACCAAAAGAACAGG 59.702 40.000 0.00 0.00 0.00 4.00
2855 3845 0.821711 CACCAAAAGAACAGGCCGGA 60.822 55.000 10.86 0.00 0.00 5.14
2856 3846 0.112412 ACCAAAAGAACAGGCCGGAT 59.888 50.000 10.86 0.00 0.00 4.18
2857 3847 1.353022 ACCAAAAGAACAGGCCGGATA 59.647 47.619 10.86 0.00 0.00 2.59
2874 3864 4.275936 CCGGATAGGCTTGGTTTATTTCTG 59.724 45.833 0.00 0.00 0.00 3.02
2900 3890 0.819259 AGCGAGAAACTTGGCTGCAA 60.819 50.000 0.50 0.00 33.81 4.08
3018 4013 1.014352 CTGCCGGGTATTTGCTACAC 58.986 55.000 2.18 0.00 31.44 2.90
3408 4413 9.355215 ACTATCGTAGTAAGTTGTCATTCTTTG 57.645 33.333 0.00 0.00 37.23 2.77
3424 4429 8.893727 GTCATTCTTTGTTGCTGTAGGTATTAT 58.106 33.333 0.00 0.00 0.00 1.28
3463 4468 6.996879 TGATTAGACGCCTAGAACTGTATAGT 59.003 38.462 0.00 0.00 39.32 2.12
3683 4689 9.953565 TGTAGCATGTATTTAAAGGTCTAGTTT 57.046 29.630 0.00 0.00 0.00 2.66
3749 4756 6.982141 GGATCACCACTTATGAATACGTTGTA 59.018 38.462 0.00 0.00 35.97 2.41
3821 4828 4.881850 AGAGCAAACATTATTTACTCCCCG 59.118 41.667 0.00 0.00 0.00 5.73
3911 4918 0.887933 CACCCCCAAGGATTTTCGTG 59.112 55.000 0.00 0.00 39.89 4.35
4123 5139 1.918253 GACCCTGATGCCACTGGAT 59.082 57.895 0.00 0.00 0.00 3.41
4302 5318 3.739519 GCAACTCGCATCCTCAGAGTATT 60.740 47.826 0.00 0.00 43.60 1.89
4317 5333 1.069823 AGTATTGCGAGCCAGGATGAG 59.930 52.381 0.00 0.00 39.69 2.90
4545 5564 0.179111 ATGCTGGTCGGTATGTGTCG 60.179 55.000 0.00 0.00 0.00 4.35
4554 5573 0.178068 GGTATGTGTCGGTGGCATCT 59.822 55.000 0.00 0.00 0.00 2.90
4594 5613 1.874562 GCTGCTGCTGGTTCTTCTG 59.125 57.895 8.53 0.00 36.03 3.02
4596 5615 0.605860 CTGCTGCTGGTTCTTCTGCT 60.606 55.000 0.00 0.00 33.58 4.24
4597 5616 0.887836 TGCTGCTGGTTCTTCTGCTG 60.888 55.000 0.00 0.00 35.08 4.41
4598 5617 1.874562 CTGCTGGTTCTTCTGCTGC 59.125 57.895 0.00 0.00 33.58 5.25
4599 5618 1.584380 CTGCTGGTTCTTCTGCTGCC 61.584 60.000 0.00 0.00 33.58 4.85
4600 5619 2.338785 GCTGGTTCTTCTGCTGCCC 61.339 63.158 0.00 0.00 0.00 5.36
4601 5620 1.073722 CTGGTTCTTCTGCTGCCCA 59.926 57.895 0.00 0.00 0.00 5.36
4602 5621 0.959372 CTGGTTCTTCTGCTGCCCAG 60.959 60.000 0.00 0.50 43.17 4.45
4617 5636 2.887568 CAGCCTGTTAGAGCGCCG 60.888 66.667 2.29 0.00 0.00 6.46
4678 5697 1.205655 CAATGAGTGCCTCTTCCTCGA 59.794 52.381 4.21 0.00 0.00 4.04
4683 5702 1.066573 AGTGCCTCTTCCTCGACATTG 60.067 52.381 0.00 0.00 0.00 2.82
4692 5711 0.816825 CCTCGACATTGCCATCTGGG 60.817 60.000 0.00 0.00 40.85 4.45
4740 5759 2.434336 TGGACAGTCGATATTCTTGGGG 59.566 50.000 0.00 0.00 0.00 4.96
4771 5790 2.403987 GCGCTGCTGCTGAATCTG 59.596 61.111 14.03 0.00 36.97 2.90
4775 5794 0.733729 GCTGCTGCTGAATCTGGAAG 59.266 55.000 10.92 0.00 36.03 3.46
4784 5803 3.818180 CTGAATCTGGAAGGAATGAGGG 58.182 50.000 0.00 0.00 0.00 4.30
4794 5813 1.145738 AGGAATGAGGGCAACACAAGT 59.854 47.619 0.00 0.00 39.74 3.16
4841 5860 2.202919 CGCCGATCAGCACCATGA 60.203 61.111 1.15 0.00 0.00 3.07
4956 5990 1.519455 GAACCGTCCTGCCAGATCG 60.519 63.158 0.00 0.00 0.00 3.69
4970 6004 2.280389 ATCGTAGCTGCGCCATGG 60.280 61.111 20.12 7.63 0.00 3.66
5009 6043 0.037303 AGCAATCACAGGTCCAGTGG 59.963 55.000 13.96 1.40 37.58 4.00
5037 6071 4.134379 CTGCAAGCCTAGAAGAATCTGA 57.866 45.455 0.00 0.00 37.10 3.27
5056 6102 1.216427 GAAGGCCATCTTTGGGGATCT 59.784 52.381 5.01 0.00 43.84 2.75
5107 6153 8.571461 TTGAGCATAACATTTCTTTCTCAGAT 57.429 30.769 0.00 0.00 31.96 2.90
5109 6155 7.066645 TGAGCATAACATTTCTTTCTCAGATGG 59.933 37.037 0.00 0.00 0.00 3.51
5182 6228 4.612943 TGGCTTCGGTGTAACAATTTTTC 58.387 39.130 0.00 0.00 39.98 2.29
5184 6230 4.915667 GGCTTCGGTGTAACAATTTTTCTC 59.084 41.667 0.00 0.00 39.98 2.87
5506 8696 1.134965 CCCAAGCCACTCTTACTCTCG 60.135 57.143 0.00 0.00 32.74 4.04
5518 8708 2.791347 TACTCTCGCTCTCACCTCTT 57.209 50.000 0.00 0.00 0.00 2.85
5573 8790 7.862372 GTGCAAGATTGATGAGTTTTTCTTGTA 59.138 33.333 10.95 5.10 41.18 2.41
5575 8792 9.415544 GCAAGATTGATGAGTTTTTCTTGTATT 57.584 29.630 10.95 0.00 41.18 1.89
5595 8812 9.912634 TTGTATTTTTCAATGATGAGTTTCCTC 57.087 29.630 0.00 0.00 36.78 3.71
5632 8849 6.599638 GTCTTTATGAGTAGGCAAGTTGGATT 59.400 38.462 4.75 0.00 0.00 3.01
5635 8852 3.674997 TGAGTAGGCAAGTTGGATTCAC 58.325 45.455 4.75 0.00 0.00 3.18
5637 8854 4.263462 TGAGTAGGCAAGTTGGATTCACAT 60.263 41.667 4.75 0.00 0.00 3.21
5638 8855 4.265073 AGTAGGCAAGTTGGATTCACATC 58.735 43.478 4.75 0.00 0.00 3.06
5655 8873 5.277250 TCACATCCCACTAGTCATTAGGAA 58.723 41.667 0.00 0.00 33.42 3.36
5660 8878 7.402071 ACATCCCACTAGTCATTAGGAAAGTTA 59.598 37.037 0.00 0.00 33.42 2.24
5662 8880 8.019656 TCCCACTAGTCATTAGGAAAGTTATC 57.980 38.462 0.00 0.00 33.42 1.75
5685 8903 7.215719 TCATACGCTTATACTCTAGTGCATT 57.784 36.000 0.00 0.00 0.00 3.56
5687 8905 4.537965 ACGCTTATACTCTAGTGCATTCG 58.462 43.478 0.00 0.00 0.00 3.34
5689 8907 4.613448 CGCTTATACTCTAGTGCATTCGTC 59.387 45.833 0.00 0.00 0.00 4.20
5695 8913 3.626217 ACTCTAGTGCATTCGTCGTATGA 59.374 43.478 15.13 0.00 0.00 2.15
5699 8917 3.521560 AGTGCATTCGTCGTATGACAAT 58.478 40.909 15.13 10.40 45.80 2.71
5700 8918 3.551890 AGTGCATTCGTCGTATGACAATC 59.448 43.478 15.13 8.41 45.80 2.67
5701 8919 3.551890 GTGCATTCGTCGTATGACAATCT 59.448 43.478 15.13 0.00 45.80 2.40
5702 8920 3.796717 TGCATTCGTCGTATGACAATCTC 59.203 43.478 15.13 8.23 45.80 2.75
5703 8921 4.045104 GCATTCGTCGTATGACAATCTCT 58.955 43.478 15.13 0.00 45.80 3.10
5704 8922 5.212934 GCATTCGTCGTATGACAATCTCTA 58.787 41.667 15.13 0.00 45.80 2.43
5705 8923 5.685954 GCATTCGTCGTATGACAATCTCTAA 59.314 40.000 15.13 0.00 45.80 2.10
5706 8924 6.363626 GCATTCGTCGTATGACAATCTCTAAT 59.636 38.462 15.13 0.96 45.80 1.73
5707 8925 7.409874 GCATTCGTCGTATGACAATCTCTAATC 60.410 40.741 15.13 0.00 45.80 1.75
5708 8926 5.998553 TCGTCGTATGACAATCTCTAATCC 58.001 41.667 15.24 0.00 45.80 3.01
5709 8927 5.763698 TCGTCGTATGACAATCTCTAATCCT 59.236 40.000 15.24 0.00 45.80 3.24
5710 8928 6.262496 TCGTCGTATGACAATCTCTAATCCTT 59.738 38.462 15.24 0.00 45.80 3.36
5711 8929 6.360947 CGTCGTATGACAATCTCTAATCCTTG 59.639 42.308 15.24 0.00 45.80 3.61
5712 8930 6.144724 GTCGTATGACAATCTCTAATCCTTGC 59.855 42.308 10.30 0.00 44.82 4.01
5713 8931 5.985530 CGTATGACAATCTCTAATCCTTGCA 59.014 40.000 0.00 0.00 0.00 4.08
5714 8932 6.648310 CGTATGACAATCTCTAATCCTTGCAT 59.352 38.462 0.00 0.00 0.00 3.96
5715 8933 7.172190 CGTATGACAATCTCTAATCCTTGCATT 59.828 37.037 0.00 0.00 0.00 3.56
5716 8934 9.494271 GTATGACAATCTCTAATCCTTGCATTA 57.506 33.333 0.00 0.00 0.00 1.90
5717 8935 8.985315 ATGACAATCTCTAATCCTTGCATTAA 57.015 30.769 0.00 0.00 0.00 1.40
5718 8936 8.213518 TGACAATCTCTAATCCTTGCATTAAC 57.786 34.615 0.00 0.00 0.00 2.01
5719 8937 7.828717 TGACAATCTCTAATCCTTGCATTAACA 59.171 33.333 0.00 0.00 0.00 2.41
5720 8938 8.757982 ACAATCTCTAATCCTTGCATTAACAT 57.242 30.769 0.00 0.00 0.00 2.71
5721 8939 9.193806 ACAATCTCTAATCCTTGCATTAACATT 57.806 29.630 0.00 0.00 0.00 2.71
5722 8940 9.459640 CAATCTCTAATCCTTGCATTAACATTG 57.540 33.333 0.00 0.00 0.00 2.82
5723 8941 7.572523 TCTCTAATCCTTGCATTAACATTGG 57.427 36.000 0.00 0.00 0.00 3.16
5724 8942 7.118723 TCTCTAATCCTTGCATTAACATTGGT 58.881 34.615 0.00 0.00 0.00 3.67
5725 8943 7.615365 TCTCTAATCCTTGCATTAACATTGGTT 59.385 33.333 0.00 0.00 41.06 3.67
5726 8944 8.815565 TCTAATCCTTGCATTAACATTGGTTA 57.184 30.769 0.00 0.00 38.45 2.85
5727 8945 9.420118 TCTAATCCTTGCATTAACATTGGTTAT 57.580 29.630 0.00 0.00 39.15 1.89
5731 8949 8.588290 TCCTTGCATTAACATTGGTTATAAGT 57.412 30.769 0.00 0.00 39.15 2.24
5732 8950 8.465999 TCCTTGCATTAACATTGGTTATAAGTG 58.534 33.333 0.00 0.00 39.15 3.16
5733 8951 7.222611 CCTTGCATTAACATTGGTTATAAGTGC 59.777 37.037 0.00 0.00 39.15 4.40
5734 8952 7.163001 TGCATTAACATTGGTTATAAGTGCA 57.837 32.000 0.00 0.00 39.15 4.57
5735 8953 7.780064 TGCATTAACATTGGTTATAAGTGCAT 58.220 30.769 0.00 0.00 39.15 3.96
5736 8954 8.256605 TGCATTAACATTGGTTATAAGTGCATT 58.743 29.630 0.00 0.00 39.15 3.56
5737 8955 8.755018 GCATTAACATTGGTTATAAGTGCATTC 58.245 33.333 0.00 0.00 39.15 2.67
5738 8956 8.957028 CATTAACATTGGTTATAAGTGCATTCG 58.043 33.333 0.00 0.00 39.15 3.34
5739 8957 6.509418 AACATTGGTTATAAGTGCATTCGT 57.491 33.333 0.00 0.00 34.87 3.85
5740 8958 6.509418 ACATTGGTTATAAGTGCATTCGTT 57.491 33.333 0.00 0.00 0.00 3.85
5741 8959 6.321717 ACATTGGTTATAAGTGCATTCGTTG 58.678 36.000 0.00 0.00 0.00 4.10
5742 8960 5.950758 TTGGTTATAAGTGCATTCGTTGT 57.049 34.783 0.00 0.00 0.00 3.32
5743 8961 5.289917 TGGTTATAAGTGCATTCGTTGTG 57.710 39.130 0.00 0.00 0.00 3.33
5744 8962 4.757657 TGGTTATAAGTGCATTCGTTGTGT 59.242 37.500 0.00 0.00 0.00 3.72
5745 8963 5.932883 TGGTTATAAGTGCATTCGTTGTGTA 59.067 36.000 0.00 0.00 0.00 2.90
5746 8964 6.427242 TGGTTATAAGTGCATTCGTTGTGTAA 59.573 34.615 0.00 0.00 0.00 2.41
5747 8965 6.739550 GGTTATAAGTGCATTCGTTGTGTAAC 59.260 38.462 0.00 0.00 37.35 2.50
5783 9001 9.420118 TCCTTGCATTAACATTGGTTATAAGAT 57.580 29.630 0.00 0.00 39.15 2.40
5810 9028 2.051334 TTGCCTAATGATCAACCCCG 57.949 50.000 0.00 0.00 0.00 5.73
5816 9034 4.023193 GCCTAATGATCAACCCCGTTAATG 60.023 45.833 0.00 0.00 0.00 1.90
5823 9041 2.159382 CAACCCCGTTAATGCAAGACT 58.841 47.619 0.00 0.00 0.00 3.24
5824 9042 2.556622 CAACCCCGTTAATGCAAGACTT 59.443 45.455 0.00 0.00 0.00 3.01
5825 9043 2.871453 ACCCCGTTAATGCAAGACTTT 58.129 42.857 0.00 0.00 0.00 2.66
5826 9044 2.817844 ACCCCGTTAATGCAAGACTTTC 59.182 45.455 0.00 0.00 0.00 2.62
5827 9045 3.081804 CCCCGTTAATGCAAGACTTTCT 58.918 45.455 0.00 0.00 0.00 2.52
5828 9046 3.506067 CCCCGTTAATGCAAGACTTTCTT 59.494 43.478 0.00 0.00 37.14 2.52
5829 9047 4.022329 CCCCGTTAATGCAAGACTTTCTTT 60.022 41.667 0.00 0.00 33.78 2.52
5830 9048 5.182380 CCCCGTTAATGCAAGACTTTCTTTA 59.818 40.000 0.00 0.00 33.78 1.85
5831 9049 6.084277 CCCGTTAATGCAAGACTTTCTTTAC 58.916 40.000 0.00 0.00 33.78 2.01
5832 9050 6.084277 CCGTTAATGCAAGACTTTCTTTACC 58.916 40.000 0.00 0.00 33.78 2.85
5833 9051 6.072673 CCGTTAATGCAAGACTTTCTTTACCT 60.073 38.462 0.00 0.00 33.78 3.08
5834 9052 7.360361 CGTTAATGCAAGACTTTCTTTACCTT 58.640 34.615 0.00 0.00 33.78 3.50
5835 9053 7.860872 CGTTAATGCAAGACTTTCTTTACCTTT 59.139 33.333 0.00 0.00 33.78 3.11
5836 9054 9.529325 GTTAATGCAAGACTTTCTTTACCTTTT 57.471 29.630 0.00 0.00 33.78 2.27
5837 9055 9.528018 TTAATGCAAGACTTTCTTTACCTTTTG 57.472 29.630 0.00 0.00 33.78 2.44
5838 9056 6.767524 TGCAAGACTTTCTTTACCTTTTGA 57.232 33.333 0.00 0.00 33.78 2.69
5839 9057 6.560711 TGCAAGACTTTCTTTACCTTTTGAC 58.439 36.000 0.00 0.00 33.78 3.18
5840 9058 6.377146 TGCAAGACTTTCTTTACCTTTTGACT 59.623 34.615 0.00 0.00 33.78 3.41
5841 9059 7.093945 TGCAAGACTTTCTTTACCTTTTGACTT 60.094 33.333 0.00 0.00 33.78 3.01
5842 9060 7.432545 GCAAGACTTTCTTTACCTTTTGACTTC 59.567 37.037 0.00 0.00 33.78 3.01
5843 9061 8.678199 CAAGACTTTCTTTACCTTTTGACTTCT 58.322 33.333 0.00 0.00 33.78 2.85
5844 9062 8.809468 AGACTTTCTTTACCTTTTGACTTCTT 57.191 30.769 0.00 0.00 0.00 2.52
5845 9063 9.901172 AGACTTTCTTTACCTTTTGACTTCTTA 57.099 29.630 0.00 0.00 0.00 2.10
5854 9072 7.689446 ACCTTTTGACTTCTTATAAAGCTCC 57.311 36.000 0.00 0.00 0.00 4.70
5855 9073 7.231467 ACCTTTTGACTTCTTATAAAGCTCCA 58.769 34.615 0.00 0.00 0.00 3.86
5856 9074 7.890655 ACCTTTTGACTTCTTATAAAGCTCCAT 59.109 33.333 0.00 0.00 0.00 3.41
5857 9075 8.401709 CCTTTTGACTTCTTATAAAGCTCCATC 58.598 37.037 0.00 0.00 0.00 3.51
5858 9076 8.862325 TTTTGACTTCTTATAAAGCTCCATCA 57.138 30.769 0.00 0.00 0.00 3.07
5859 9077 7.849804 TTGACTTCTTATAAAGCTCCATCAC 57.150 36.000 0.00 0.00 0.00 3.06
5860 9078 6.349300 TGACTTCTTATAAAGCTCCATCACC 58.651 40.000 0.00 0.00 0.00 4.02
5861 9079 6.070251 TGACTTCTTATAAAGCTCCATCACCA 60.070 38.462 0.00 0.00 0.00 4.17
5862 9080 6.904626 ACTTCTTATAAAGCTCCATCACCAT 58.095 36.000 0.00 0.00 0.00 3.55
5863 9081 7.349598 ACTTCTTATAAAGCTCCATCACCATT 58.650 34.615 0.00 0.00 0.00 3.16
5864 9082 7.500559 ACTTCTTATAAAGCTCCATCACCATTC 59.499 37.037 0.00 0.00 0.00 2.67
5865 9083 7.141758 TCTTATAAAGCTCCATCACCATTCT 57.858 36.000 0.00 0.00 0.00 2.40
5866 9084 7.220030 TCTTATAAAGCTCCATCACCATTCTC 58.780 38.462 0.00 0.00 0.00 2.87
5867 9085 5.643421 ATAAAGCTCCATCACCATTCTCT 57.357 39.130 0.00 0.00 0.00 3.10
5868 9086 4.313020 AAAGCTCCATCACCATTCTCTT 57.687 40.909 0.00 0.00 0.00 2.85
5869 9087 4.313020 AAGCTCCATCACCATTCTCTTT 57.687 40.909 0.00 0.00 0.00 2.52
5870 9088 4.313020 AGCTCCATCACCATTCTCTTTT 57.687 40.909 0.00 0.00 0.00 2.27
5871 9089 4.670765 AGCTCCATCACCATTCTCTTTTT 58.329 39.130 0.00 0.00 0.00 1.94
5894 9112 8.592105 TTTTTCATTAAGTGCAAAGATCAAGG 57.408 30.769 0.00 0.00 0.00 3.61
5895 9113 6.899393 TTCATTAAGTGCAAAGATCAAGGT 57.101 33.333 0.00 0.00 0.00 3.50
5896 9114 6.500684 TCATTAAGTGCAAAGATCAAGGTC 57.499 37.500 0.00 0.00 0.00 3.85
5897 9115 5.415701 TCATTAAGTGCAAAGATCAAGGTCC 59.584 40.000 0.00 0.00 0.00 4.46
5898 9116 1.813513 AGTGCAAAGATCAAGGTCCG 58.186 50.000 0.00 0.00 0.00 4.79
5899 9117 1.347707 AGTGCAAAGATCAAGGTCCGA 59.652 47.619 0.00 0.00 0.00 4.55
5900 9118 1.734465 GTGCAAAGATCAAGGTCCGAG 59.266 52.381 0.00 0.00 0.00 4.63
5901 9119 0.729690 GCAAAGATCAAGGTCCGAGC 59.270 55.000 0.00 0.00 0.00 5.03
5902 9120 1.677217 GCAAAGATCAAGGTCCGAGCT 60.677 52.381 0.00 0.00 0.00 4.09
5903 9121 2.275318 CAAAGATCAAGGTCCGAGCTC 58.725 52.381 2.73 2.73 0.00 4.09
5904 9122 1.561643 AAGATCAAGGTCCGAGCTCA 58.438 50.000 15.40 0.00 0.00 4.26
5905 9123 1.561643 AGATCAAGGTCCGAGCTCAA 58.438 50.000 15.40 0.00 0.00 3.02
5906 9124 1.480137 AGATCAAGGTCCGAGCTCAAG 59.520 52.381 15.40 4.31 0.00 3.02
5907 9125 1.205893 GATCAAGGTCCGAGCTCAAGT 59.794 52.381 15.40 0.00 0.00 3.16
5908 9126 1.919240 TCAAGGTCCGAGCTCAAGTA 58.081 50.000 15.40 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.950909 CGGCCAAAGTCCACTTAAACA 59.049 47.619 2.24 0.00 34.61 2.83
1 2 2.031420 GTCGGCCAAAGTCCACTTAAAC 60.031 50.000 2.24 0.00 34.61 2.01
3 4 1.874739 CGTCGGCCAAAGTCCACTTAA 60.875 52.381 2.24 0.00 34.61 1.85
4 5 0.320073 CGTCGGCCAAAGTCCACTTA 60.320 55.000 2.24 0.00 34.61 2.24
5 6 1.597027 CGTCGGCCAAAGTCCACTT 60.597 57.895 2.24 0.00 37.91 3.16
6 7 2.030562 CGTCGGCCAAAGTCCACT 59.969 61.111 2.24 0.00 0.00 4.00
7 8 1.441732 AAACGTCGGCCAAAGTCCAC 61.442 55.000 2.24 0.00 0.00 4.02
8 9 1.153127 AAACGTCGGCCAAAGTCCA 60.153 52.632 2.24 0.00 0.00 4.02
9 10 1.161563 TCAAACGTCGGCCAAAGTCC 61.162 55.000 2.24 0.00 0.00 3.85
10 11 0.041576 GTCAAACGTCGGCCAAAGTC 60.042 55.000 2.24 0.00 0.00 3.01
12 13 1.281656 GGTCAAACGTCGGCCAAAG 59.718 57.895 2.24 0.00 0.00 2.77
13 14 2.535788 CGGTCAAACGTCGGCCAAA 61.536 57.895 2.24 0.00 0.00 3.28
14 15 2.968156 CGGTCAAACGTCGGCCAA 60.968 61.111 2.24 0.00 0.00 4.52
15 16 4.973055 CCGGTCAAACGTCGGCCA 62.973 66.667 2.24 0.00 37.25 5.36
18 19 4.973055 TGGCCGGTCAAACGTCGG 62.973 66.667 6.10 8.18 45.84 4.79
19 20 1.847890 AAATGGCCGGTCAAACGTCG 61.848 55.000 15.45 0.00 0.00 5.12
20 21 1.158434 TAAATGGCCGGTCAAACGTC 58.842 50.000 15.45 0.00 0.00 4.34
21 22 1.470890 CATAAATGGCCGGTCAAACGT 59.529 47.619 15.45 0.32 0.00 3.99
22 23 1.470890 ACATAAATGGCCGGTCAAACG 59.529 47.619 15.45 2.40 0.00 3.60
23 24 3.440872 TGTACATAAATGGCCGGTCAAAC 59.559 43.478 15.45 3.57 0.00 2.93
24 25 3.687125 TGTACATAAATGGCCGGTCAAA 58.313 40.909 15.45 1.24 0.00 2.69
25 26 3.351794 TGTACATAAATGGCCGGTCAA 57.648 42.857 15.45 0.00 0.00 3.18
26 27 3.351794 TTGTACATAAATGGCCGGTCA 57.648 42.857 13.22 13.22 0.00 4.02
27 28 4.911514 AATTGTACATAAATGGCCGGTC 57.088 40.909 0.00 0.00 0.00 4.79
28 29 5.278758 GCATAATTGTACATAAATGGCCGGT 60.279 40.000 1.90 0.00 0.00 5.28
29 30 5.048083 AGCATAATTGTACATAAATGGCCGG 60.048 40.000 0.00 0.00 0.00 6.13
30 31 6.012658 AGCATAATTGTACATAAATGGCCG 57.987 37.500 0.00 0.00 0.00 6.13
31 32 9.927668 ATTAAGCATAATTGTACATAAATGGCC 57.072 29.630 0.00 0.00 0.00 5.36
43 44 9.009327 CGAAATTGACGAATTAAGCATAATTGT 57.991 29.630 11.43 9.59 40.87 2.71
44 45 8.471457 CCGAAATTGACGAATTAAGCATAATTG 58.529 33.333 11.43 6.91 40.87 2.32
45 46 7.167468 GCCGAAATTGACGAATTAAGCATAATT 59.833 33.333 6.64 6.64 42.92 1.40
46 47 6.636850 GCCGAAATTGACGAATTAAGCATAAT 59.363 34.615 6.83 0.00 31.18 1.28
47 48 5.968848 GCCGAAATTGACGAATTAAGCATAA 59.031 36.000 6.83 0.00 31.18 1.90
48 49 5.504994 GGCCGAAATTGACGAATTAAGCATA 60.505 40.000 6.83 0.00 31.18 3.14
49 50 4.351192 GCCGAAATTGACGAATTAAGCAT 58.649 39.130 6.83 0.00 31.18 3.79
50 51 3.426963 GGCCGAAATTGACGAATTAAGCA 60.427 43.478 6.83 0.00 31.18 3.91
51 52 3.105937 GGCCGAAATTGACGAATTAAGC 58.894 45.455 6.83 1.68 31.18 3.09
52 53 4.095610 GTGGCCGAAATTGACGAATTAAG 58.904 43.478 0.00 0.00 31.18 1.85
53 54 3.425094 CGTGGCCGAAATTGACGAATTAA 60.425 43.478 3.59 0.00 35.63 1.40
54 55 2.094575 CGTGGCCGAAATTGACGAATTA 59.905 45.455 3.59 0.00 35.63 1.40
55 56 1.135803 CGTGGCCGAAATTGACGAATT 60.136 47.619 3.59 0.00 35.63 2.17
56 57 0.446222 CGTGGCCGAAATTGACGAAT 59.554 50.000 3.59 0.00 35.63 3.34
57 58 0.881159 ACGTGGCCGAAATTGACGAA 60.881 50.000 15.50 0.00 37.88 3.85
58 59 1.286354 GACGTGGCCGAAATTGACGA 61.286 55.000 15.50 0.00 37.88 4.20
59 60 1.131826 GACGTGGCCGAAATTGACG 59.868 57.895 7.88 7.88 37.88 4.35
60 61 1.131826 CGACGTGGCCGAAATTGAC 59.868 57.895 0.00 0.00 37.88 3.18
61 62 2.030401 CCGACGTGGCCGAAATTGA 61.030 57.895 0.00 0.00 37.88 2.57
62 63 1.015085 TACCGACGTGGCCGAAATTG 61.015 55.000 0.00 0.00 43.94 2.32
63 64 0.108041 ATACCGACGTGGCCGAAATT 60.108 50.000 0.00 0.00 43.94 1.82
64 65 0.746063 TATACCGACGTGGCCGAAAT 59.254 50.000 0.00 0.00 43.94 2.17
65 66 0.529833 TTATACCGACGTGGCCGAAA 59.470 50.000 0.00 0.00 43.94 3.46
66 67 0.529833 TTTATACCGACGTGGCCGAA 59.470 50.000 0.00 0.00 43.94 4.30
67 68 0.746063 ATTTATACCGACGTGGCCGA 59.254 50.000 0.00 0.00 43.94 5.54
68 69 0.856641 CATTTATACCGACGTGGCCG 59.143 55.000 0.00 0.00 43.94 6.13
69 70 2.228138 TCATTTATACCGACGTGGCC 57.772 50.000 0.00 0.00 43.94 5.36
70 71 2.286025 GGTTCATTTATACCGACGTGGC 59.714 50.000 0.00 0.00 43.94 5.01
78 79 2.546789 CGAAGGCCGGTTCATTTATACC 59.453 50.000 1.90 0.00 33.91 2.73
79 80 3.460103 TCGAAGGCCGGTTCATTTATAC 58.540 45.455 1.90 0.00 39.14 1.47
80 81 3.823281 TCGAAGGCCGGTTCATTTATA 57.177 42.857 1.90 0.00 39.14 0.98
81 82 2.702592 TCGAAGGCCGGTTCATTTAT 57.297 45.000 1.90 0.00 39.14 1.40
82 83 2.285083 CATCGAAGGCCGGTTCATTTA 58.715 47.619 1.90 0.00 39.14 1.40
83 84 1.094785 CATCGAAGGCCGGTTCATTT 58.905 50.000 1.90 0.00 39.14 2.32
84 85 0.748005 CCATCGAAGGCCGGTTCATT 60.748 55.000 1.90 0.00 39.14 2.57
85 86 1.153168 CCATCGAAGGCCGGTTCAT 60.153 57.895 1.90 0.00 39.14 2.57
86 87 2.267642 CCATCGAAGGCCGGTTCA 59.732 61.111 1.90 0.00 39.14 3.18
87 88 2.513897 CCCATCGAAGGCCGGTTC 60.514 66.667 1.90 0.00 39.14 3.62
88 89 4.796495 GCCCATCGAAGGCCGGTT 62.796 66.667 16.95 0.00 45.16 4.44
94 95 4.473520 AGGTGCGCCCATCGAAGG 62.474 66.667 14.07 0.00 41.67 3.46
95 96 3.197790 CAGGTGCGCCCATCGAAG 61.198 66.667 14.07 0.00 41.67 3.79
96 97 3.950794 GACAGGTGCGCCCATCGAA 62.951 63.158 14.07 0.00 41.67 3.71
97 98 4.451150 GACAGGTGCGCCCATCGA 62.451 66.667 14.07 0.00 41.67 3.59
99 100 4.451150 TCGACAGGTGCGCCCATC 62.451 66.667 14.07 10.07 34.66 3.51
100 101 4.760047 GTCGACAGGTGCGCCCAT 62.760 66.667 14.07 0.00 34.66 4.00
105 106 0.457166 TATTTCGGTCGACAGGTGCG 60.457 55.000 18.91 11.30 0.00 5.34
106 107 1.717194 TTATTTCGGTCGACAGGTGC 58.283 50.000 18.91 0.00 0.00 5.01
107 108 4.735662 TTTTTATTTCGGTCGACAGGTG 57.264 40.909 18.91 3.93 0.00 4.00
125 126 0.375803 GACGTGCGTGTCTGGTTTTT 59.624 50.000 0.67 0.00 35.95 1.94
126 127 1.433837 GGACGTGCGTGTCTGGTTTT 61.434 55.000 0.67 0.00 38.91 2.43
127 128 1.885850 GGACGTGCGTGTCTGGTTT 60.886 57.895 0.67 0.00 38.91 3.27
128 129 2.279918 GGACGTGCGTGTCTGGTT 60.280 61.111 0.67 0.00 38.91 3.67
129 130 3.533105 TGGACGTGCGTGTCTGGT 61.533 61.111 0.67 0.00 38.91 4.00
130 131 2.971428 AAGTGGACGTGCGTGTCTGG 62.971 60.000 0.67 0.00 38.91 3.86
131 132 1.591594 AAGTGGACGTGCGTGTCTG 60.592 57.895 0.67 0.00 38.91 3.51
132 133 1.591594 CAAGTGGACGTGCGTGTCT 60.592 57.895 0.67 0.00 38.91 3.41
133 134 0.944311 ATCAAGTGGACGTGCGTGTC 60.944 55.000 0.67 0.00 38.17 3.67
134 135 0.944311 GATCAAGTGGACGTGCGTGT 60.944 55.000 0.67 0.00 0.00 4.49
135 136 0.943835 TGATCAAGTGGACGTGCGTG 60.944 55.000 0.67 0.51 0.00 5.34
136 137 0.249699 TTGATCAAGTGGACGTGCGT 60.250 50.000 3.38 0.00 0.00 5.24
137 138 0.865111 TTTGATCAAGTGGACGTGCG 59.135 50.000 8.41 0.00 0.00 5.34
138 139 1.069227 GGTTTGATCAAGTGGACGTGC 60.069 52.381 8.41 0.00 0.00 5.34
139 140 2.217750 TGGTTTGATCAAGTGGACGTG 58.782 47.619 8.41 0.00 0.00 4.49
140 141 2.631160 TGGTTTGATCAAGTGGACGT 57.369 45.000 8.41 0.00 0.00 4.34
141 142 2.350772 GCTTGGTTTGATCAAGTGGACG 60.351 50.000 8.41 0.00 42.44 4.79
142 143 2.350772 CGCTTGGTTTGATCAAGTGGAC 60.351 50.000 8.41 3.88 44.41 4.02
143 144 1.879380 CGCTTGGTTTGATCAAGTGGA 59.121 47.619 8.41 0.00 44.41 4.02
144 145 2.336554 CGCTTGGTTTGATCAAGTGG 57.663 50.000 8.41 0.71 44.41 4.00
146 147 3.740115 AGTACGCTTGGTTTGATCAAGT 58.260 40.909 8.41 4.01 42.44 3.16
147 148 4.749245 AAGTACGCTTGGTTTGATCAAG 57.251 40.909 8.41 0.00 43.10 3.02
148 149 4.576873 TGAAAGTACGCTTGGTTTGATCAA 59.423 37.500 3.38 3.38 34.71 2.57
149 150 4.130857 TGAAAGTACGCTTGGTTTGATCA 58.869 39.130 0.00 0.00 34.71 2.92
150 151 4.742438 TGAAAGTACGCTTGGTTTGATC 57.258 40.909 0.00 0.00 34.71 2.92
151 152 5.705609 AATGAAAGTACGCTTGGTTTGAT 57.294 34.783 0.00 0.00 34.71 2.57
152 153 5.277825 CAAATGAAAGTACGCTTGGTTTGA 58.722 37.500 6.76 0.00 35.50 2.69
153 154 4.444056 CCAAATGAAAGTACGCTTGGTTTG 59.556 41.667 0.00 0.00 34.71 2.93
154 155 4.500716 CCCAAATGAAAGTACGCTTGGTTT 60.501 41.667 0.00 0.00 34.71 3.27
155 156 3.005367 CCCAAATGAAAGTACGCTTGGTT 59.995 43.478 0.00 0.00 34.71 3.67
156 157 2.556622 CCCAAATGAAAGTACGCTTGGT 59.443 45.455 0.00 0.00 34.71 3.67
157 158 2.556622 ACCCAAATGAAAGTACGCTTGG 59.443 45.455 0.00 0.00 34.71 3.61
158 159 3.666902 CGACCCAAATGAAAGTACGCTTG 60.667 47.826 0.00 0.00 34.71 4.01
159 160 2.482721 CGACCCAAATGAAAGTACGCTT 59.517 45.455 0.00 0.00 36.30 4.68
160 161 2.073816 CGACCCAAATGAAAGTACGCT 58.926 47.619 0.00 0.00 0.00 5.07
161 162 1.129811 CCGACCCAAATGAAAGTACGC 59.870 52.381 0.00 0.00 0.00 4.42
162 163 1.129811 GCCGACCCAAATGAAAGTACG 59.870 52.381 0.00 0.00 0.00 3.67
163 164 1.129811 CGCCGACCCAAATGAAAGTAC 59.870 52.381 0.00 0.00 0.00 2.73
164 165 1.444836 CGCCGACCCAAATGAAAGTA 58.555 50.000 0.00 0.00 0.00 2.24
165 166 1.862602 GCGCCGACCCAAATGAAAGT 61.863 55.000 0.00 0.00 0.00 2.66
166 167 1.154035 GCGCCGACCCAAATGAAAG 60.154 57.895 0.00 0.00 0.00 2.62
167 168 2.958576 GCGCCGACCCAAATGAAA 59.041 55.556 0.00 0.00 0.00 2.69
168 169 3.427425 CGCGCCGACCCAAATGAA 61.427 61.111 0.00 0.00 0.00 2.57
177 178 4.520846 CAATTCCAGCGCGCCGAC 62.521 66.667 30.33 0.00 0.00 4.79
180 181 4.543084 GAGCAATTCCAGCGCGCC 62.543 66.667 30.33 9.85 37.01 6.53
181 182 1.705337 TTAGAGCAATTCCAGCGCGC 61.705 55.000 26.66 26.66 36.87 6.86
182 183 0.940126 ATTAGAGCAATTCCAGCGCG 59.060 50.000 0.00 0.00 36.87 6.86
183 184 2.724349 CAATTAGAGCAATTCCAGCGC 58.276 47.619 0.00 0.00 34.49 5.92
184 185 2.357009 AGCAATTAGAGCAATTCCAGCG 59.643 45.455 0.00 0.00 34.49 5.18
185 186 3.243334 GGAGCAATTAGAGCAATTCCAGC 60.243 47.826 0.00 0.00 34.49 4.85
186 187 3.003068 CGGAGCAATTAGAGCAATTCCAG 59.997 47.826 0.00 0.00 34.49 3.86
187 188 2.945008 CGGAGCAATTAGAGCAATTCCA 59.055 45.455 0.00 0.00 34.49 3.53
188 189 2.945668 ACGGAGCAATTAGAGCAATTCC 59.054 45.455 0.00 0.00 34.49 3.01
189 190 3.375299 ACACGGAGCAATTAGAGCAATTC 59.625 43.478 0.00 0.00 34.49 2.17
190 191 3.127548 CACACGGAGCAATTAGAGCAATT 59.872 43.478 0.00 0.00 37.32 2.32
191 192 2.679837 CACACGGAGCAATTAGAGCAAT 59.320 45.455 0.00 0.00 0.00 3.56
192 193 2.076100 CACACGGAGCAATTAGAGCAA 58.924 47.619 0.00 0.00 0.00 3.91
193 194 1.725641 CACACGGAGCAATTAGAGCA 58.274 50.000 0.00 0.00 0.00 4.26
194 195 0.375106 GCACACGGAGCAATTAGAGC 59.625 55.000 0.00 0.00 0.00 4.09
195 196 1.009829 GGCACACGGAGCAATTAGAG 58.990 55.000 0.00 0.00 0.00 2.43
196 197 0.323302 TGGCACACGGAGCAATTAGA 59.677 50.000 0.00 0.00 0.00 2.10
197 198 1.164411 TTGGCACACGGAGCAATTAG 58.836 50.000 0.00 0.00 39.29 1.73
208 209 0.317854 GCCTCGTTTCTTTGGCACAC 60.318 55.000 0.00 0.00 44.34 3.82
210 211 1.082104 CGCCTCGTTTCTTTGGCAC 60.082 57.895 0.00 0.00 45.13 5.01
278 282 2.033372 TGACCCCAAAGCATGCATATG 58.967 47.619 21.98 14.77 37.36 1.78
279 283 2.457813 TGACCCCAAAGCATGCATAT 57.542 45.000 21.98 2.20 0.00 1.78
280 284 2.101783 CTTGACCCCAAAGCATGCATA 58.898 47.619 21.98 0.00 0.00 3.14
281 285 0.899720 CTTGACCCCAAAGCATGCAT 59.100 50.000 21.98 4.57 0.00 3.96
282 286 1.818959 GCTTGACCCCAAAGCATGCA 61.819 55.000 21.98 0.00 34.16 3.96
283 287 1.079612 GCTTGACCCCAAAGCATGC 60.080 57.895 10.51 10.51 0.00 4.06
333 337 5.470368 ACATAGTGTATGTGATATGGCGTC 58.530 41.667 0.00 0.00 46.94 5.19
345 349 4.371786 CAGTACTGGGCACATAGTGTATG 58.628 47.826 15.49 0.00 41.88 2.39
435 730 3.190535 ACCACGTTGATATTTTGCAGGTC 59.809 43.478 0.00 0.00 0.00 3.85
470 765 1.589196 GCGCAGATACTCCGTGTCC 60.589 63.158 0.30 0.00 0.00 4.02
516 811 6.257423 TGCTTTGCATTATTTCACGAGTATG 58.743 36.000 0.00 0.00 31.71 2.39
563 864 6.026513 GTCTCACTCTGCTTTGCATTATTTC 58.973 40.000 0.00 0.00 38.13 2.17
564 865 5.391310 CGTCTCACTCTGCTTTGCATTATTT 60.391 40.000 0.00 0.00 38.13 1.40
565 866 4.093998 CGTCTCACTCTGCTTTGCATTATT 59.906 41.667 0.00 0.00 38.13 1.40
566 867 3.620374 CGTCTCACTCTGCTTTGCATTAT 59.380 43.478 0.00 0.00 38.13 1.28
567 868 2.995939 CGTCTCACTCTGCTTTGCATTA 59.004 45.455 0.00 0.00 38.13 1.90
568 869 1.802960 CGTCTCACTCTGCTTTGCATT 59.197 47.619 0.00 0.00 38.13 3.56
569 870 1.001293 TCGTCTCACTCTGCTTTGCAT 59.999 47.619 0.00 0.00 38.13 3.96
570 871 0.389025 TCGTCTCACTCTGCTTTGCA 59.611 50.000 0.00 0.00 36.92 4.08
571 872 1.066914 CTCGTCTCACTCTGCTTTGC 58.933 55.000 0.00 0.00 0.00 3.68
572 873 1.270826 TCCTCGTCTCACTCTGCTTTG 59.729 52.381 0.00 0.00 0.00 2.77
573 874 1.543802 CTCCTCGTCTCACTCTGCTTT 59.456 52.381 0.00 0.00 0.00 3.51
574 875 1.173043 CTCCTCGTCTCACTCTGCTT 58.827 55.000 0.00 0.00 0.00 3.91
575 876 0.679640 CCTCCTCGTCTCACTCTGCT 60.680 60.000 0.00 0.00 0.00 4.24
576 877 1.662438 CCCTCCTCGTCTCACTCTGC 61.662 65.000 0.00 0.00 0.00 4.26
577 878 0.034960 TCCCTCCTCGTCTCACTCTG 60.035 60.000 0.00 0.00 0.00 3.35
578 879 0.699399 TTCCCTCCTCGTCTCACTCT 59.301 55.000 0.00 0.00 0.00 3.24
579 880 1.546961 TTTCCCTCCTCGTCTCACTC 58.453 55.000 0.00 0.00 0.00 3.51
580 881 2.011122 TTTTCCCTCCTCGTCTCACT 57.989 50.000 0.00 0.00 0.00 3.41
581 882 2.299297 TCTTTTTCCCTCCTCGTCTCAC 59.701 50.000 0.00 0.00 0.00 3.51
582 883 2.605257 TCTTTTTCCCTCCTCGTCTCA 58.395 47.619 0.00 0.00 0.00 3.27
583 884 3.679824 TTCTTTTTCCCTCCTCGTCTC 57.320 47.619 0.00 0.00 0.00 3.36
584 885 4.432980 TTTTCTTTTTCCCTCCTCGTCT 57.567 40.909 0.00 0.00 0.00 4.18
585 886 4.820173 TCTTTTTCTTTTTCCCTCCTCGTC 59.180 41.667 0.00 0.00 0.00 4.20
586 887 4.788679 TCTTTTTCTTTTTCCCTCCTCGT 58.211 39.130 0.00 0.00 0.00 4.18
587 888 5.767816 TTCTTTTTCTTTTTCCCTCCTCG 57.232 39.130 0.00 0.00 0.00 4.63
588 889 8.258007 TCTTTTTCTTTTTCTTTTTCCCTCCTC 58.742 33.333 0.00 0.00 0.00 3.71
589 890 8.146053 TCTTTTTCTTTTTCTTTTTCCCTCCT 57.854 30.769 0.00 0.00 0.00 3.69
590 891 8.786826 TTCTTTTTCTTTTTCTTTTTCCCTCC 57.213 30.769 0.00 0.00 0.00 4.30
600 901 5.692115 TGCCCCTTTCTTTTTCTTTTTCT 57.308 34.783 0.00 0.00 0.00 2.52
642 943 2.034878 TCATCTCATCTCGGAACCCAG 58.965 52.381 0.00 0.00 0.00 4.45
681 982 2.418669 AGGGGGAAGACAAGTCAAAGA 58.581 47.619 2.72 0.00 0.00 2.52
700 1216 2.884685 CGCAGCCGCAGAGAGAAG 60.885 66.667 0.00 0.00 38.40 2.85
825 1341 1.484653 GGAGAAGAAGGAGCCTCTTCC 59.515 57.143 17.47 12.26 42.94 3.46
826 1342 1.136110 CGGAGAAGAAGGAGCCTCTTC 59.864 57.143 15.15 15.15 42.43 2.87
827 1343 1.190643 CGGAGAAGAAGGAGCCTCTT 58.809 55.000 0.00 0.00 0.00 2.85
828 1344 0.333312 TCGGAGAAGAAGGAGCCTCT 59.667 55.000 0.00 0.00 0.00 3.69
829 1345 1.187087 TTCGGAGAAGAAGGAGCCTC 58.813 55.000 0.00 0.00 45.90 4.70
833 1349 6.169800 AGAAAAAGATTCGGAGAAGAAGGAG 58.830 40.000 0.00 0.00 45.90 3.69
855 1371 9.449719 CTCCTGGCTTTTTAGTAAAGATAAAGA 57.550 33.333 8.37 0.00 0.00 2.52
856 1372 9.232473 ACTCCTGGCTTTTTAGTAAAGATAAAG 57.768 33.333 0.00 0.00 0.00 1.85
858 1374 9.886132 CTACTCCTGGCTTTTTAGTAAAGATAA 57.114 33.333 0.00 0.00 0.00 1.75
859 1375 9.043548 ACTACTCCTGGCTTTTTAGTAAAGATA 57.956 33.333 0.00 0.00 0.00 1.98
860 1376 7.919151 ACTACTCCTGGCTTTTTAGTAAAGAT 58.081 34.615 0.00 0.00 0.00 2.40
968 1484 0.898320 TCTCTCCGCTTTTCCTCCTG 59.102 55.000 0.00 0.00 0.00 3.86
1212 1773 6.934645 TCGAGGCCCAATTGAATTAATAGTAG 59.065 38.462 7.12 0.00 0.00 2.57
1565 2312 7.732025 TGTGTCTCCTCTTTTATCACACTTAA 58.268 34.615 0.00 0.00 34.92 1.85
1677 2424 4.277174 AGTGACTATCGATAGCAGAAGGTG 59.723 45.833 28.37 6.66 33.68 4.00
1678 2425 4.465886 AGTGACTATCGATAGCAGAAGGT 58.534 43.478 28.37 11.11 33.68 3.50
1699 2463 7.856145 AAGAAAACAAGTAGAGGCATATGAG 57.144 36.000 6.97 0.00 0.00 2.90
1734 2498 6.395629 TCTATCAGTTTAGGACGAACCAAAG 58.604 40.000 0.00 0.00 42.04 2.77
1937 2703 2.748388 ACCACAGGAGTGTAGATACCC 58.252 52.381 0.00 0.00 44.39 3.69
2299 3076 7.004555 TCTTCTTCTTAGTGGTTGCATTCTA 57.995 36.000 0.00 0.00 0.00 2.10
2314 3091 4.100373 AGTAGCACCCTGATCTTCTTCTT 58.900 43.478 0.00 0.00 0.00 2.52
2315 3092 3.718723 AGTAGCACCCTGATCTTCTTCT 58.281 45.455 0.00 0.00 0.00 2.85
2316 3093 4.438148 GAAGTAGCACCCTGATCTTCTTC 58.562 47.826 0.00 0.00 30.88 2.87
2365 3148 3.380637 CAGATTTCCTGCAATCCTCCTTG 59.619 47.826 0.00 0.00 35.89 3.61
2487 3332 6.264744 CCTTAATCCAAGACATGAGCAATCAT 59.735 38.462 0.00 0.00 36.22 2.45
2497 3342 6.055588 CGAACATACCCTTAATCCAAGACAT 58.944 40.000 0.00 0.00 36.22 3.06
2520 3365 3.120041 GGTTGGTTTTGGACACAAATCG 58.880 45.455 0.00 0.00 45.31 3.34
2573 3481 1.067821 GGCAACCATCCAAACAACGAA 59.932 47.619 0.00 0.00 0.00 3.85
2596 3504 0.330604 AGCATGGGCATGACAGAAGT 59.669 50.000 0.00 0.00 44.61 3.01
2600 3508 1.027357 GGTTAGCATGGGCATGACAG 58.973 55.000 0.00 0.00 44.61 3.51
2615 3523 3.468071 TGAACTAGAGAGGGCAGGTTA 57.532 47.619 0.00 0.00 0.00 2.85
2840 3830 2.420058 CCTATCCGGCCTGTTCTTTT 57.580 50.000 0.00 0.00 0.00 2.27
2855 3845 8.829373 ATTTCTCAGAAATAAACCAAGCCTAT 57.171 30.769 11.16 0.00 0.00 2.57
2856 3846 9.396022 CTATTTCTCAGAAATAAACCAAGCCTA 57.604 33.333 18.54 0.00 0.00 3.93
2857 3847 7.148000 GCTATTTCTCAGAAATAAACCAAGCCT 60.148 37.037 18.54 0.00 0.00 4.58
2874 3864 3.935828 AGCCAAGTTTCTCGCTATTTCTC 59.064 43.478 0.00 0.00 0.00 2.87
2917 3912 5.404366 CGAACCTGAAACGATCTCTTTGTAA 59.596 40.000 0.00 0.00 0.00 2.41
2919 3914 3.741344 CGAACCTGAAACGATCTCTTTGT 59.259 43.478 0.00 0.00 0.00 2.83
3032 4034 7.601856 TCAGGTATGCAAATTAAAACTGAAGG 58.398 34.615 0.00 0.00 30.39 3.46
3408 4413 8.204836 CCTCCCATATATAATACCTACAGCAAC 58.795 40.741 0.00 0.00 0.00 4.17
3549 4555 9.273137 AGAGAAAGAAGAGTAAATATTCCCTGA 57.727 33.333 0.00 0.00 28.82 3.86
3683 4689 9.775854 ACCATGAATGTAACAATTCAATCAAAA 57.224 25.926 3.92 0.00 46.66 2.44
3749 4756 4.161942 ACTTCACTCATAGCTCTCATTGCT 59.838 41.667 0.00 0.00 43.79 3.91
3821 4828 3.821033 ACCCACTAGTTGCTGAATTTGTC 59.179 43.478 0.00 0.00 0.00 3.18
3896 4903 2.684881 CTGATCCACGAAAATCCTTGGG 59.315 50.000 0.00 0.00 0.00 4.12
3911 4918 8.912988 TCAAAATTCACCAATATTACCTGATCC 58.087 33.333 0.00 0.00 0.00 3.36
4123 5139 4.261994 GGCTTTGTTTGGTCTTTCAGCATA 60.262 41.667 0.00 0.00 30.77 3.14
4302 5318 1.816537 GTACTCATCCTGGCTCGCA 59.183 57.895 0.00 0.00 0.00 5.10
4317 5333 4.409218 TGCGTGCCGGTCTCGTAC 62.409 66.667 17.24 6.61 34.47 3.67
4432 5448 4.980805 TGCCTGCGTGGTCGGAAC 62.981 66.667 0.00 0.00 36.90 3.62
4545 5564 3.446570 GCAGGTGCAGATGCCACC 61.447 66.667 11.22 14.68 40.26 4.61
4596 5615 2.671070 GCTCTAACAGGCTGGGCA 59.329 61.111 20.34 2.01 0.00 5.36
4597 5616 2.512515 CGCTCTAACAGGCTGGGC 60.513 66.667 20.34 12.90 0.00 5.36
4598 5617 2.512515 GCGCTCTAACAGGCTGGG 60.513 66.667 20.34 8.65 0.00 4.45
4599 5618 2.512515 GGCGCTCTAACAGGCTGG 60.513 66.667 20.34 0.62 0.00 4.85
4600 5619 2.887568 CGGCGCTCTAACAGGCTG 60.888 66.667 14.16 14.16 0.00 4.85
4601 5620 4.821589 GCGGCGCTCTAACAGGCT 62.822 66.667 26.86 0.00 0.00 4.58
4603 5622 4.796231 ACGCGGCGCTCTAACAGG 62.796 66.667 30.54 13.92 0.00 4.00
4604 5623 2.279937 GAAACGCGGCGCTCTAACAG 62.280 60.000 30.54 14.71 0.00 3.16
4605 5624 2.356553 AAACGCGGCGCTCTAACA 60.357 55.556 30.54 0.00 0.00 2.41
4606 5625 1.623973 AAGAAACGCGGCGCTCTAAC 61.624 55.000 30.54 16.29 0.00 2.34
4607 5626 1.373748 AAGAAACGCGGCGCTCTAA 60.374 52.632 30.54 0.00 0.00 2.10
4617 5636 1.269569 CCTGGGTTTTCCAAGAAACGC 60.270 52.381 9.67 9.67 46.51 4.84
4636 5655 0.244721 GCAAGATTTCTGCCACCACC 59.755 55.000 0.00 0.00 0.00 4.61
4771 5790 1.177401 GTGTTGCCCTCATTCCTTCC 58.823 55.000 0.00 0.00 0.00 3.46
4775 5794 1.270550 CACTTGTGTTGCCCTCATTCC 59.729 52.381 0.00 0.00 0.00 3.01
4784 5803 2.655044 GCCGTGCACTTGTGTTGC 60.655 61.111 16.19 2.32 0.00 4.17
4805 5824 1.671261 CGTTGAGCTCCTTCCTGTCAG 60.671 57.143 12.15 0.00 0.00 3.51
4970 6004 3.144506 CTCACATATCTTGGCATGTCCC 58.855 50.000 0.00 0.00 33.12 4.46
5037 6071 1.312884 AGATCCCCAAAGATGGCCTT 58.687 50.000 3.32 0.00 46.09 4.35
5056 6102 7.977789 TCAGATGCATAACTTGACAGTAAAA 57.022 32.000 0.00 0.00 30.68 1.52
5107 6153 2.040947 TGTTTCATATGTCACTGGGCCA 59.959 45.455 5.85 5.85 0.00 5.36
5109 6155 3.609853 TCTGTTTCATATGTCACTGGGC 58.390 45.455 1.90 0.00 0.00 5.36
5318 8508 1.973812 GGAGGCCTGTTGGAAGTGC 60.974 63.158 12.00 0.00 34.57 4.40
5349 8539 0.606401 ACGGACTGCCCAGACAAATG 60.606 55.000 1.69 0.00 34.14 2.32
5506 8696 4.202212 GGAGAGGAAATAAGAGGTGAGAGC 60.202 50.000 0.00 0.00 0.00 4.09
5518 8708 8.707796 AAGATACAGATAACGGAGAGGAAATA 57.292 34.615 0.00 0.00 0.00 1.40
5595 8812 9.372369 CCTACTCATAAAGACCTAGAACTTTTG 57.628 37.037 15.40 13.39 37.49 2.44
5600 8817 6.466885 TGCCTACTCATAAAGACCTAGAAC 57.533 41.667 0.00 0.00 0.00 3.01
5601 8818 6.668283 ACTTGCCTACTCATAAAGACCTAGAA 59.332 38.462 0.00 0.00 0.00 2.10
5607 8824 5.488341 TCCAACTTGCCTACTCATAAAGAC 58.512 41.667 0.00 0.00 0.00 3.01
5632 8849 4.878968 TCCTAATGACTAGTGGGATGTGA 58.121 43.478 0.00 0.00 0.00 3.58
5635 8852 6.240549 ACTTTCCTAATGACTAGTGGGATG 57.759 41.667 0.00 0.00 31.41 3.51
5637 8854 7.622081 TGATAACTTTCCTAATGACTAGTGGGA 59.378 37.037 0.00 0.00 29.11 4.37
5638 8855 7.792032 TGATAACTTTCCTAATGACTAGTGGG 58.208 38.462 0.00 0.00 0.00 4.61
5642 8859 9.130312 GCGTATGATAACTTTCCTAATGACTAG 57.870 37.037 0.00 0.00 0.00 2.57
5660 8878 6.819397 TGCACTAGAGTATAAGCGTATGAT 57.181 37.500 2.09 0.00 0.00 2.45
5662 8880 6.249471 CGAATGCACTAGAGTATAAGCGTATG 59.751 42.308 2.09 0.00 0.00 2.39
5667 8885 4.613448 CGACGAATGCACTAGAGTATAAGC 59.387 45.833 0.00 0.00 0.00 3.09
5674 8892 3.969352 GTCATACGACGAATGCACTAGAG 59.031 47.826 0.00 0.00 31.07 2.43
5685 8903 5.763698 AGGATTAGAGATTGTCATACGACGA 59.236 40.000 0.00 0.00 45.80 4.20
5687 8905 6.144724 GCAAGGATTAGAGATTGTCATACGAC 59.855 42.308 0.00 0.00 42.93 4.34
5689 8907 5.985530 TGCAAGGATTAGAGATTGTCATACG 59.014 40.000 0.00 0.00 0.00 3.06
5695 8913 8.757982 ATGTTAATGCAAGGATTAGAGATTGT 57.242 30.769 0.00 0.00 0.00 2.71
5699 8917 7.118723 ACCAATGTTAATGCAAGGATTAGAGA 58.881 34.615 0.00 0.00 0.00 3.10
5700 8918 7.338800 ACCAATGTTAATGCAAGGATTAGAG 57.661 36.000 0.00 0.00 0.00 2.43
5701 8919 7.716799 AACCAATGTTAATGCAAGGATTAGA 57.283 32.000 0.00 0.00 31.36 2.10
5705 8923 9.200817 ACTTATAACCAATGTTAATGCAAGGAT 57.799 29.630 0.00 0.00 40.21 3.24
5706 8924 8.465999 CACTTATAACCAATGTTAATGCAAGGA 58.534 33.333 0.00 0.00 40.21 3.36
5707 8925 7.222611 GCACTTATAACCAATGTTAATGCAAGG 59.777 37.037 0.00 0.00 40.21 3.61
5708 8926 7.758980 TGCACTTATAACCAATGTTAATGCAAG 59.241 33.333 0.00 6.40 39.71 4.01
5709 8927 7.606349 TGCACTTATAACCAATGTTAATGCAA 58.394 30.769 0.00 0.00 39.71 4.08
5710 8928 7.163001 TGCACTTATAACCAATGTTAATGCA 57.837 32.000 0.00 0.00 40.21 3.96
5711 8929 8.647143 AATGCACTTATAACCAATGTTAATGC 57.353 30.769 0.00 0.00 40.21 3.56
5712 8930 8.957028 CGAATGCACTTATAACCAATGTTAATG 58.043 33.333 0.00 0.00 40.21 1.90
5713 8931 8.682710 ACGAATGCACTTATAACCAATGTTAAT 58.317 29.630 0.00 0.00 40.21 1.40
5714 8932 8.046294 ACGAATGCACTTATAACCAATGTTAA 57.954 30.769 0.00 0.00 40.21 2.01
5715 8933 7.618502 ACGAATGCACTTATAACCAATGTTA 57.381 32.000 0.00 0.00 41.03 2.41
5716 8934 6.509418 ACGAATGCACTTATAACCAATGTT 57.491 33.333 0.00 0.00 38.52 2.71
5717 8935 6.072175 ACAACGAATGCACTTATAACCAATGT 60.072 34.615 0.00 0.00 0.00 2.71
5718 8936 6.251163 CACAACGAATGCACTTATAACCAATG 59.749 38.462 0.00 0.00 0.00 2.82
5719 8937 6.072175 ACACAACGAATGCACTTATAACCAAT 60.072 34.615 0.00 0.00 0.00 3.16
5720 8938 5.239744 ACACAACGAATGCACTTATAACCAA 59.760 36.000 0.00 0.00 0.00 3.67
5721 8939 4.757657 ACACAACGAATGCACTTATAACCA 59.242 37.500 0.00 0.00 0.00 3.67
5722 8940 5.291293 ACACAACGAATGCACTTATAACC 57.709 39.130 0.00 0.00 0.00 2.85
5723 8941 7.292292 TGTTACACAACGAATGCACTTATAAC 58.708 34.615 0.00 0.00 37.48 1.89
5724 8942 7.422878 TGTTACACAACGAATGCACTTATAA 57.577 32.000 0.00 0.00 37.48 0.98
5725 8943 7.422878 TTGTTACACAACGAATGCACTTATA 57.577 32.000 0.00 0.00 37.48 0.98
5726 8944 5.933187 TGTTACACAACGAATGCACTTAT 57.067 34.783 0.00 0.00 37.48 1.73
5727 8945 5.736486 TTGTTACACAACGAATGCACTTA 57.264 34.783 0.00 0.00 37.48 2.24
5728 8946 4.624336 TTGTTACACAACGAATGCACTT 57.376 36.364 0.00 0.00 37.48 3.16
5729 8947 4.515191 AGATTGTTACACAACGAATGCACT 59.485 37.500 0.00 0.00 41.40 4.40
5730 8948 4.783242 AGATTGTTACACAACGAATGCAC 58.217 39.130 0.00 0.00 41.40 4.57
5731 8949 4.754618 AGAGATTGTTACACAACGAATGCA 59.245 37.500 0.00 0.00 41.40 3.96
5732 8950 5.283060 AGAGATTGTTACACAACGAATGC 57.717 39.130 0.00 0.00 41.40 3.56
5733 8951 8.116753 GGATTAGAGATTGTTACACAACGAATG 58.883 37.037 0.00 0.00 41.40 2.67
5734 8952 8.041323 AGGATTAGAGATTGTTACACAACGAAT 58.959 33.333 0.00 0.00 41.40 3.34
5735 8953 7.383687 AGGATTAGAGATTGTTACACAACGAA 58.616 34.615 0.00 0.00 41.40 3.85
5736 8954 6.931838 AGGATTAGAGATTGTTACACAACGA 58.068 36.000 0.00 0.00 41.40 3.85
5737 8955 7.456253 CAAGGATTAGAGATTGTTACACAACG 58.544 38.462 0.00 0.00 41.40 4.10
5738 8956 7.094805 TGCAAGGATTAGAGATTGTTACACAAC 60.095 37.037 0.00 0.00 41.40 3.32
5739 8957 6.939730 TGCAAGGATTAGAGATTGTTACACAA 59.060 34.615 0.00 0.00 42.95 3.33
5740 8958 6.472016 TGCAAGGATTAGAGATTGTTACACA 58.528 36.000 0.00 0.00 0.00 3.72
5741 8959 6.985188 TGCAAGGATTAGAGATTGTTACAC 57.015 37.500 0.00 0.00 0.00 2.90
5742 8960 9.679661 TTAATGCAAGGATTAGAGATTGTTACA 57.320 29.630 0.00 0.00 0.00 2.41
5743 8961 9.937175 GTTAATGCAAGGATTAGAGATTGTTAC 57.063 33.333 0.00 0.00 0.00 2.50
5744 8962 9.679661 TGTTAATGCAAGGATTAGAGATTGTTA 57.320 29.630 0.00 0.00 0.00 2.41
5745 8963 8.579850 TGTTAATGCAAGGATTAGAGATTGTT 57.420 30.769 0.00 0.00 0.00 2.83
5746 8964 8.757982 ATGTTAATGCAAGGATTAGAGATTGT 57.242 30.769 0.00 0.00 0.00 2.71
5747 8965 9.459640 CAATGTTAATGCAAGGATTAGAGATTG 57.540 33.333 0.00 9.41 0.00 2.67
5748 8966 8.636213 CCAATGTTAATGCAAGGATTAGAGATT 58.364 33.333 0.00 0.00 0.00 2.40
5749 8967 7.781693 ACCAATGTTAATGCAAGGATTAGAGAT 59.218 33.333 0.00 0.00 0.00 2.75
5750 8968 7.118723 ACCAATGTTAATGCAAGGATTAGAGA 58.881 34.615 0.00 0.00 0.00 3.10
5803 9021 2.159382 AGTCTTGCATTAACGGGGTTG 58.841 47.619 0.00 0.00 0.00 3.77
5810 9028 9.529325 AAAAGGTAAAGAAAGTCTTGCATTAAC 57.471 29.630 0.00 0.00 36.71 2.01
5816 9034 6.796426 AGTCAAAAGGTAAAGAAAGTCTTGC 58.204 36.000 0.00 0.00 36.71 4.01
5828 9046 9.227777 GGAGCTTTATAAGAAGTCAAAAGGTAA 57.772 33.333 0.00 0.00 37.83 2.85
5829 9047 8.380099 TGGAGCTTTATAAGAAGTCAAAAGGTA 58.620 33.333 0.00 0.00 37.83 3.08
5830 9048 7.231467 TGGAGCTTTATAAGAAGTCAAAAGGT 58.769 34.615 0.00 0.00 39.73 3.50
5831 9049 7.687941 TGGAGCTTTATAAGAAGTCAAAAGG 57.312 36.000 0.00 0.00 0.00 3.11
5832 9050 8.950210 TGATGGAGCTTTATAAGAAGTCAAAAG 58.050 33.333 0.00 0.00 0.00 2.27
5833 9051 8.730680 GTGATGGAGCTTTATAAGAAGTCAAAA 58.269 33.333 0.00 0.00 0.00 2.44
5834 9052 7.336931 GGTGATGGAGCTTTATAAGAAGTCAAA 59.663 37.037 0.00 0.00 0.00 2.69
5835 9053 6.823689 GGTGATGGAGCTTTATAAGAAGTCAA 59.176 38.462 0.00 0.00 0.00 3.18
5836 9054 6.070251 TGGTGATGGAGCTTTATAAGAAGTCA 60.070 38.462 0.00 0.00 0.00 3.41
5837 9055 6.349300 TGGTGATGGAGCTTTATAAGAAGTC 58.651 40.000 0.00 0.00 0.00 3.01
5838 9056 6.313519 TGGTGATGGAGCTTTATAAGAAGT 57.686 37.500 0.00 0.00 0.00 3.01
5839 9057 7.718753 AGAATGGTGATGGAGCTTTATAAGAAG 59.281 37.037 0.00 0.00 0.00 2.85
5840 9058 7.577303 AGAATGGTGATGGAGCTTTATAAGAA 58.423 34.615 0.00 0.00 0.00 2.52
5841 9059 7.071698 AGAGAATGGTGATGGAGCTTTATAAGA 59.928 37.037 0.00 0.00 0.00 2.10
5842 9060 7.222872 AGAGAATGGTGATGGAGCTTTATAAG 58.777 38.462 0.00 0.00 0.00 1.73
5843 9061 7.141758 AGAGAATGGTGATGGAGCTTTATAA 57.858 36.000 0.00 0.00 0.00 0.98
5844 9062 6.753913 AGAGAATGGTGATGGAGCTTTATA 57.246 37.500 0.00 0.00 0.00 0.98
5845 9063 5.643421 AGAGAATGGTGATGGAGCTTTAT 57.357 39.130 0.00 0.00 0.00 1.40
5846 9064 5.441718 AAGAGAATGGTGATGGAGCTTTA 57.558 39.130 0.00 0.00 0.00 1.85
5847 9065 4.313020 AAGAGAATGGTGATGGAGCTTT 57.687 40.909 0.00 0.00 0.00 3.51
5848 9066 4.313020 AAAGAGAATGGTGATGGAGCTT 57.687 40.909 0.00 0.00 0.00 3.74
5849 9067 4.313020 AAAAGAGAATGGTGATGGAGCT 57.687 40.909 0.00 0.00 0.00 4.09
5869 9087 8.203485 ACCTTGATCTTTGCACTTAATGAAAAA 58.797 29.630 0.00 0.00 35.25 1.94
5870 9088 7.725251 ACCTTGATCTTTGCACTTAATGAAAA 58.275 30.769 0.00 0.00 34.41 2.29
5871 9089 7.288810 ACCTTGATCTTTGCACTTAATGAAA 57.711 32.000 0.00 0.00 0.00 2.69
5872 9090 6.071952 GGACCTTGATCTTTGCACTTAATGAA 60.072 38.462 0.00 0.00 0.00 2.57
5873 9091 5.415701 GGACCTTGATCTTTGCACTTAATGA 59.584 40.000 0.00 0.00 0.00 2.57
5874 9092 5.644644 GGACCTTGATCTTTGCACTTAATG 58.355 41.667 0.00 0.00 0.00 1.90
5875 9093 4.396166 CGGACCTTGATCTTTGCACTTAAT 59.604 41.667 0.00 0.00 0.00 1.40
5876 9094 3.751175 CGGACCTTGATCTTTGCACTTAA 59.249 43.478 0.00 0.00 0.00 1.85
5877 9095 3.007506 TCGGACCTTGATCTTTGCACTTA 59.992 43.478 0.00 0.00 0.00 2.24
5878 9096 2.154462 CGGACCTTGATCTTTGCACTT 58.846 47.619 0.00 0.00 0.00 3.16
5879 9097 1.347707 TCGGACCTTGATCTTTGCACT 59.652 47.619 0.00 0.00 0.00 4.40
5880 9098 1.734465 CTCGGACCTTGATCTTTGCAC 59.266 52.381 0.00 0.00 0.00 4.57
5881 9099 1.945819 GCTCGGACCTTGATCTTTGCA 60.946 52.381 0.00 0.00 0.00 4.08
5882 9100 0.729690 GCTCGGACCTTGATCTTTGC 59.270 55.000 0.00 0.00 0.00 3.68
5883 9101 2.275318 GAGCTCGGACCTTGATCTTTG 58.725 52.381 0.00 0.00 0.00 2.77
5884 9102 1.902508 TGAGCTCGGACCTTGATCTTT 59.097 47.619 9.64 0.00 0.00 2.52
5885 9103 1.561643 TGAGCTCGGACCTTGATCTT 58.438 50.000 9.64 0.00 0.00 2.40
5886 9104 1.480137 CTTGAGCTCGGACCTTGATCT 59.520 52.381 9.64 0.00 0.00 2.75
5887 9105 1.205893 ACTTGAGCTCGGACCTTGATC 59.794 52.381 9.64 0.00 0.00 2.92
5888 9106 1.270907 ACTTGAGCTCGGACCTTGAT 58.729 50.000 9.64 0.00 0.00 2.57
5889 9107 1.919240 TACTTGAGCTCGGACCTTGA 58.081 50.000 9.64 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.