Multiple sequence alignment - TraesCS7B01G173700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G173700 chr7B 100.000 5300 0 0 1 5300 244760456 244755157 0.000000e+00 9788.0
1 TraesCS7B01G173700 chr7B 81.381 333 49 9 311 638 448336316 448335992 5.270000e-65 259.0
2 TraesCS7B01G173700 chr7D 96.637 2379 55 11 2932 5300 264490504 264488141 0.000000e+00 3927.0
3 TraesCS7B01G173700 chr7D 92.748 1241 45 18 815 2054 264492369 264491173 0.000000e+00 1751.0
4 TraesCS7B01G173700 chr7D 96.569 408 12 2 2085 2490 264490980 264490573 0.000000e+00 675.0
5 TraesCS7B01G173700 chr7D 78.826 562 96 16 183 730 430923865 430923313 1.820000e-94 357.0
6 TraesCS7B01G173700 chr7D 82.174 230 34 7 145 370 40246366 40246140 1.950000e-44 191.0
7 TraesCS7B01G173700 chr7D 74.741 483 88 20 272 742 191573649 191574109 9.060000e-43 185.0
8 TraesCS7B01G173700 chr7D 84.409 186 28 1 97 281 37812244 37812059 1.170000e-41 182.0
9 TraesCS7B01G173700 chr7D 95.745 94 3 1 2832 2925 529693214 529693122 3.310000e-32 150.0
10 TraesCS7B01G173700 chr7D 93.478 92 5 1 4868 4958 458728466 458728557 9.260000e-28 135.0
11 TraesCS7B01G173700 chr7D 94.253 87 5 0 4871 4957 234796633 234796547 3.330000e-27 134.0
12 TraesCS7B01G173700 chr7D 96.000 75 3 0 2760 2834 264490575 264490501 7.210000e-24 122.0
13 TraesCS7B01G173700 chr7A 94.955 1685 62 7 828 2490 288068903 288067220 0.000000e+00 2619.0
14 TraesCS7B01G173700 chr7A 96.183 1598 36 7 2932 4520 288067151 288065570 0.000000e+00 2590.0
15 TraesCS7B01G173700 chr7A 97.323 934 23 2 4367 5300 288065572 288064641 0.000000e+00 1585.0
16 TraesCS7B01G173700 chr7A 91.594 571 41 6 3266 3835 548568942 548569506 0.000000e+00 782.0
17 TraesCS7B01G173700 chr7A 80.702 570 95 12 177 733 4693889 4693322 3.790000e-116 429.0
18 TraesCS7B01G173700 chr7A 76.748 658 118 18 93 735 441570379 441571016 8.510000e-88 335.0
19 TraesCS7B01G173700 chr7A 89.011 273 23 6 2491 2758 19029293 19029023 1.100000e-86 331.0
20 TraesCS7B01G173700 chr7A 96.000 75 3 0 2760 2834 288067222 288067148 7.210000e-24 122.0
21 TraesCS7B01G173700 chr2B 79.130 690 112 21 72 741 689875468 689874791 1.050000e-121 448.0
22 TraesCS7B01G173700 chr2B 80.478 251 44 3 3621 3867 85323580 85323331 2.520000e-43 187.0
23 TraesCS7B01G173700 chr2B 84.530 181 27 1 3706 3885 125828358 125828538 1.520000e-40 178.0
24 TraesCS7B01G173700 chr2B 94.949 99 4 1 2828 2925 314788230 314788132 2.560000e-33 154.0
25 TraesCS7B01G173700 chr2B 94.000 100 5 1 2826 2925 39922086 39922184 3.310000e-32 150.0
26 TraesCS7B01G173700 chr2B 79.695 197 36 4 68 260 105734484 105734288 7.160000e-29 139.0
27 TraesCS7B01G173700 chr4A 90.511 274 22 3 2489 2758 728730594 728730867 5.050000e-95 359.0
28 TraesCS7B01G173700 chr4A 78.009 432 66 12 182 610 576046089 576045684 1.470000e-60 244.0
29 TraesCS7B01G173700 chr4A 95.789 95 4 0 2831 2925 692965465 692965559 2.560000e-33 154.0
30 TraesCS7B01G173700 chr2D 91.923 260 16 4 2487 2742 116839842 116840100 5.050000e-95 359.0
31 TraesCS7B01G173700 chr2D 81.343 268 41 5 3581 3840 54675962 54675696 5.380000e-50 209.0
32 TraesCS7B01G173700 chr1B 90.511 274 22 4 2489 2758 446253937 446253664 5.050000e-95 359.0
33 TraesCS7B01G173700 chr1B 80.000 470 81 8 279 736 174731131 174730663 8.510000e-88 335.0
34 TraesCS7B01G173700 chr1B 78.367 490 91 10 254 730 606480610 606481097 2.400000e-78 303.0
35 TraesCS7B01G173700 chr1D 90.146 274 23 3 2489 2758 332066744 332066471 2.350000e-93 353.0
36 TraesCS7B01G173700 chr1D 82.530 166 25 4 80 243 464756977 464756814 5.530000e-30 143.0
37 TraesCS7B01G173700 chr6D 80.242 496 70 19 150 632 382794411 382794891 1.090000e-91 348.0
38 TraesCS7B01G173700 chr6D 89.247 279 23 6 2492 2764 31476886 31476609 5.080000e-90 342.0
39 TraesCS7B01G173700 chr6D 100.000 28 0 0 3270 3297 330860734 330860707 1.000000e-02 52.8
40 TraesCS7B01G173700 chr5B 88.732 284 24 7 2487 2764 153887702 153887983 1.830000e-89 340.0
41 TraesCS7B01G173700 chr5B 95.745 94 4 0 2832 2925 689172749 689172842 9.190000e-33 152.0
42 TraesCS7B01G173700 chr5B 78.836 189 37 3 80 267 706422029 706422215 2.000000e-24 124.0
43 TraesCS7B01G173700 chr3A 88.693 283 26 5 2485 2762 494372175 494372456 1.830000e-89 340.0
44 TraesCS7B01G173700 chr3A 80.328 183 30 6 80 259 403630958 403631137 3.330000e-27 134.0
45 TraesCS7B01G173700 chr3A 93.333 90 5 1 4868 4956 46989925 46990014 1.200000e-26 132.0
46 TraesCS7B01G173700 chr3B 79.051 506 91 10 133 632 653511799 653511303 3.060000e-87 333.0
47 TraesCS7B01G173700 chr3B 85.443 158 23 0 3705 3862 483609181 483609338 1.180000e-36 165.0
48 TraesCS7B01G173700 chr6A 77.179 631 100 29 136 741 453915340 453914729 1.420000e-85 327.0
49 TraesCS7B01G173700 chr6A 80.381 367 66 5 270 632 547289047 547288683 1.880000e-69 274.0
50 TraesCS7B01G173700 chr6A 100.000 28 0 0 3270 3297 153113555 153113528 1.000000e-02 52.8
51 TraesCS7B01G173700 chr6A 100.000 28 0 0 3270 3297 470138168 470138141 1.000000e-02 52.8
52 TraesCS7B01G173700 chr6A 100.000 28 0 0 3270 3297 588538713 588538740 1.000000e-02 52.8
53 TraesCS7B01G173700 chr6B 88.686 274 20 9 2487 2752 56320027 56320297 1.840000e-84 324.0
54 TraesCS7B01G173700 chr6B 78.814 472 79 11 291 741 663528738 663528267 1.120000e-76 298.0
55 TraesCS7B01G173700 chr6B 96.907 97 3 0 2830 2926 647445765 647445669 4.250000e-36 163.0
56 TraesCS7B01G173700 chr6B 81.356 177 28 4 80 253 671017981 671018155 7.160000e-29 139.0
57 TraesCS7B01G173700 chr3D 85.507 276 22 12 2491 2759 306084409 306084145 6.760000e-69 272.0
58 TraesCS7B01G173700 chr3D 78.571 210 39 5 80 286 609882548 609882342 3.330000e-27 134.0
59 TraesCS7B01G173700 chr3D 100.000 28 0 0 3270 3297 36083915 36083888 1.000000e-02 52.8
60 TraesCS7B01G173700 chr2A 82.155 297 44 4 3581 3869 55175681 55175386 4.100000e-61 246.0
61 TraesCS7B01G173700 chr2A 95.876 97 4 0 2829 2925 62286365 62286269 1.980000e-34 158.0
62 TraesCS7B01G173700 chr2A 100.000 29 0 0 3269 3297 246291559 246291587 3.000000e-03 54.7
63 TraesCS7B01G173700 chr5A 82.648 219 28 9 74 286 522101304 522101090 9.060000e-43 185.0
64 TraesCS7B01G173700 chr5D 86.164 159 21 1 3704 3862 564952822 564952979 2.540000e-38 171.0
65 TraesCS7B01G173700 chr5D 94.444 90 5 0 4867 4956 318879328 318879417 7.160000e-29 139.0
66 TraesCS7B01G173700 chrUn 96.000 100 3 1 2826 2925 48888589 48888687 1.530000e-35 161.0
67 TraesCS7B01G173700 chr4D 95.098 102 4 1 2825 2925 507908127 507908228 5.490000e-35 159.0
68 TraesCS7B01G173700 chr4D 74.852 338 76 6 412 741 507976876 507976540 1.540000e-30 145.0
69 TraesCS7B01G173700 chr4D 92.045 88 7 0 4869 4956 259809088 259809001 2.000000e-24 124.0
70 TraesCS7B01G173700 chr1A 93.617 94 6 0 4871 4964 49890787 49890880 1.990000e-29 141.0
71 TraesCS7B01G173700 chr4B 91.579 95 7 1 4862 4955 282886986 282886892 4.310000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G173700 chr7B 244755157 244760456 5299 True 9788.00 9788 100.00000 1 5300 1 chr7B.!!$R1 5299
1 TraesCS7B01G173700 chr7D 264488141 264492369 4228 True 1618.75 3927 95.48850 815 5300 4 chr7D.!!$R6 4485
2 TraesCS7B01G173700 chr7D 430923313 430923865 552 True 357.00 357 78.82600 183 730 1 chr7D.!!$R4 547
3 TraesCS7B01G173700 chr7A 288064641 288068903 4262 True 1729.00 2619 96.11525 828 5300 4 chr7A.!!$R3 4472
4 TraesCS7B01G173700 chr7A 548568942 548569506 564 False 782.00 782 91.59400 3266 3835 1 chr7A.!!$F2 569
5 TraesCS7B01G173700 chr7A 4693322 4693889 567 True 429.00 429 80.70200 177 733 1 chr7A.!!$R1 556
6 TraesCS7B01G173700 chr7A 441570379 441571016 637 False 335.00 335 76.74800 93 735 1 chr7A.!!$F1 642
7 TraesCS7B01G173700 chr2B 689874791 689875468 677 True 448.00 448 79.13000 72 741 1 chr2B.!!$R4 669
8 TraesCS7B01G173700 chr6A 453914729 453915340 611 True 327.00 327 77.17900 136 741 1 chr6A.!!$R2 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
778 817 0.029300 CGGATTTGCCATAGCGGTTG 59.971 55.0 0.00 0.00 44.31 3.77 F
2020 2078 0.238289 CTTGCTAAACCACCTGTGCG 59.762 55.0 0.00 0.00 0.00 5.34 F
2871 3092 0.255890 ACTTGTCGGGGGAATGGATG 59.744 55.0 0.00 0.00 0.00 3.51 F
2929 3150 0.179073 ATCCATTTCTGCGACGGAGG 60.179 55.0 16.74 0.56 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2736 2957 0.321653 CTGGCCACAGTGGGAGTAAC 60.322 60.000 21.77 2.85 39.92 2.50 R
2919 3140 0.035152 TAACTACTCCCTCCGTCGCA 60.035 55.000 0.00 0.00 0.00 5.10 R
3924 4150 1.606531 GCTGGAGAGCACCTGGATT 59.393 57.895 0.00 0.00 45.46 3.01 R
4468 4853 2.751837 GCCTTCTCCAAAGGGCCG 60.752 66.667 0.00 0.00 38.77 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.496111 GGTTATCCGTTTGTGTGTCCA 58.504 47.619 0.00 0.00 0.00 4.02
21 22 2.224784 GGTTATCCGTTTGTGTGTCCAC 59.775 50.000 0.00 0.00 42.19 4.02
22 23 3.135994 GTTATCCGTTTGTGTGTCCACT 58.864 45.455 0.00 0.00 42.34 4.00
23 24 2.341846 ATCCGTTTGTGTGTCCACTT 57.658 45.000 0.00 0.00 42.34 3.16
24 25 2.116827 TCCGTTTGTGTGTCCACTTT 57.883 45.000 0.00 0.00 42.34 2.66
25 26 1.740585 TCCGTTTGTGTGTCCACTTTG 59.259 47.619 0.00 0.00 42.34 2.77
26 27 1.470890 CCGTTTGTGTGTCCACTTTGT 59.529 47.619 0.00 0.00 42.34 2.83
27 28 2.094957 CCGTTTGTGTGTCCACTTTGTT 60.095 45.455 0.00 0.00 42.34 2.83
28 29 3.127203 CCGTTTGTGTGTCCACTTTGTTA 59.873 43.478 0.00 0.00 42.34 2.41
29 30 4.379603 CCGTTTGTGTGTCCACTTTGTTAA 60.380 41.667 0.00 0.00 42.34 2.01
30 31 5.336744 CGTTTGTGTGTCCACTTTGTTAAT 58.663 37.500 0.00 0.00 42.34 1.40
31 32 5.802956 CGTTTGTGTGTCCACTTTGTTAATT 59.197 36.000 0.00 0.00 42.34 1.40
32 33 6.020995 CGTTTGTGTGTCCACTTTGTTAATTC 60.021 38.462 0.00 0.00 42.34 2.17
33 34 6.767524 TTGTGTGTCCACTTTGTTAATTCT 57.232 33.333 0.00 0.00 42.34 2.40
34 35 6.371809 TGTGTGTCCACTTTGTTAATTCTC 57.628 37.500 0.00 0.00 42.34 2.87
35 36 6.119536 TGTGTGTCCACTTTGTTAATTCTCT 58.880 36.000 0.00 0.00 42.34 3.10
36 37 6.260050 TGTGTGTCCACTTTGTTAATTCTCTC 59.740 38.462 0.00 0.00 42.34 3.20
37 38 6.483640 GTGTGTCCACTTTGTTAATTCTCTCT 59.516 38.462 0.00 0.00 38.61 3.10
38 39 7.012421 GTGTGTCCACTTTGTTAATTCTCTCTT 59.988 37.037 0.00 0.00 38.61 2.85
39 40 8.208224 TGTGTCCACTTTGTTAATTCTCTCTTA 58.792 33.333 0.00 0.00 0.00 2.10
40 41 8.496751 GTGTCCACTTTGTTAATTCTCTCTTAC 58.503 37.037 0.00 0.00 0.00 2.34
41 42 8.208224 TGTCCACTTTGTTAATTCTCTCTTACA 58.792 33.333 0.00 0.00 0.00 2.41
42 43 9.220767 GTCCACTTTGTTAATTCTCTCTTACAT 57.779 33.333 0.00 0.00 0.00 2.29
43 44 9.219603 TCCACTTTGTTAATTCTCTCTTACATG 57.780 33.333 0.00 0.00 0.00 3.21
44 45 9.219603 CCACTTTGTTAATTCTCTCTTACATGA 57.780 33.333 0.00 0.00 0.00 3.07
75 76 8.945481 TCAGATGTTGTTGAAAAATGAAATGT 57.055 26.923 0.00 0.00 0.00 2.71
76 77 9.381033 TCAGATGTTGTTGAAAAATGAAATGTT 57.619 25.926 0.00 0.00 0.00 2.71
95 96 4.917385 TGTTAACATCTACAACCAGGCAT 58.083 39.130 3.59 0.00 0.00 4.40
106 107 0.712380 ACCAGGCATCCCAAATCCTT 59.288 50.000 0.00 0.00 0.00 3.36
116 117 2.162681 CCCAAATCCTTCTCAAACGCT 58.837 47.619 0.00 0.00 0.00 5.07
140 141 0.673985 CGGTCCACTCTGTCACTGAA 59.326 55.000 0.00 0.00 0.00 3.02
154 159 3.737266 GTCACTGAACGGTCACGAAAATA 59.263 43.478 0.00 0.00 44.60 1.40
166 171 5.338365 GTCACGAAAATATGACCTAGACGT 58.662 41.667 0.00 0.00 39.49 4.34
174 179 3.736482 GACCTAGACGTGCGCCTCG 62.736 68.421 17.87 17.87 0.00 4.63
175 180 4.554363 CCTAGACGTGCGCCTCGG 62.554 72.222 21.94 7.20 0.00 4.63
243 262 1.511613 ATATGAGGCGGATATGGGGG 58.488 55.000 0.00 0.00 0.00 5.40
331 350 7.345653 CCCACATATATTCCTTCCTATCTGCTA 59.654 40.741 0.00 0.00 0.00 3.49
374 399 2.370445 ATTCCACTCCCCTCTGCCG 61.370 63.158 0.00 0.00 0.00 5.69
432 461 1.599047 CGGGCAGTGGATCTGAGTT 59.401 57.895 0.00 0.00 46.27 3.01
537 569 2.725312 GGAGGAGGCTCGTGCATGA 61.725 63.158 21.51 8.64 41.91 3.07
549 581 2.587194 GCATGACAGCGCTCGGAT 60.587 61.111 7.13 0.00 0.00 4.18
577 609 1.451207 CGGGAATCCATTGCGTCCA 60.451 57.895 0.09 0.00 31.30 4.02
580 612 1.714899 GGAATCCATTGCGTCCACCG 61.715 60.000 0.00 0.00 40.40 4.94
645 677 1.874345 CGGAGGTGCTGTAGTCCGTT 61.874 60.000 7.93 0.00 45.62 4.44
660 699 3.502306 CGTTTGAACACGGTGACAC 57.498 52.632 16.29 0.00 36.47 3.67
673 712 3.799755 GACACACGCGCAATCCCC 61.800 66.667 5.73 0.00 0.00 4.81
703 742 2.125713 TGAGGCCATGTACGCACG 60.126 61.111 5.01 0.00 0.00 5.34
738 777 2.334653 CAAACATGGTGCGGCGTT 59.665 55.556 9.37 0.00 0.00 4.84
741 780 3.842925 AACATGGTGCGGCGTTCCT 62.843 57.895 19.17 6.42 0.00 3.36
742 781 2.125310 CATGGTGCGGCGTTCCTA 60.125 61.111 19.17 9.39 0.00 2.94
743 782 2.173669 CATGGTGCGGCGTTCCTAG 61.174 63.158 19.17 10.51 0.00 3.02
744 783 2.355986 ATGGTGCGGCGTTCCTAGA 61.356 57.895 19.17 4.39 0.00 2.43
745 784 2.202756 GGTGCGGCGTTCCTAGAG 60.203 66.667 9.37 0.00 0.00 2.43
746 785 2.202756 GTGCGGCGTTCCTAGAGG 60.203 66.667 9.37 0.00 0.00 3.69
747 786 4.143333 TGCGGCGTTCCTAGAGGC 62.143 66.667 9.37 0.00 34.44 4.70
748 787 3.839432 GCGGCGTTCCTAGAGGCT 61.839 66.667 9.37 0.00 34.44 4.58
749 788 2.893398 CGGCGTTCCTAGAGGCTT 59.107 61.111 0.00 0.00 34.44 4.35
750 789 1.218316 CGGCGTTCCTAGAGGCTTT 59.782 57.895 0.00 0.00 34.44 3.51
751 790 0.806492 CGGCGTTCCTAGAGGCTTTC 60.806 60.000 0.00 0.00 34.44 2.62
752 791 0.806492 GGCGTTCCTAGAGGCTTTCG 60.806 60.000 0.00 0.00 34.44 3.46
753 792 0.806492 GCGTTCCTAGAGGCTTTCGG 60.806 60.000 0.00 0.00 34.44 4.30
754 793 0.179108 CGTTCCTAGAGGCTTTCGGG 60.179 60.000 0.00 0.00 34.44 5.14
755 794 0.178301 GTTCCTAGAGGCTTTCGGGG 59.822 60.000 0.00 0.00 34.44 5.73
756 795 0.981277 TTCCTAGAGGCTTTCGGGGG 60.981 60.000 0.00 0.00 34.44 5.40
757 796 1.382695 CCTAGAGGCTTTCGGGGGA 60.383 63.158 0.00 0.00 0.00 4.81
758 797 1.687297 CCTAGAGGCTTTCGGGGGAC 61.687 65.000 0.00 0.00 0.00 4.46
770 809 2.278738 GGGGACCGGATTTGCCAT 59.721 61.111 9.46 0.00 40.86 4.40
771 810 1.534697 GGGGACCGGATTTGCCATA 59.465 57.895 9.46 0.00 40.86 2.74
772 811 0.537371 GGGGACCGGATTTGCCATAG 60.537 60.000 9.46 0.00 40.86 2.23
773 812 1.172812 GGGACCGGATTTGCCATAGC 61.173 60.000 9.46 0.00 40.48 2.97
774 813 1.507141 GGACCGGATTTGCCATAGCG 61.507 60.000 9.46 0.00 44.31 4.26
775 814 1.507141 GACCGGATTTGCCATAGCGG 61.507 60.000 9.46 0.00 44.31 5.52
776 815 1.525995 CCGGATTTGCCATAGCGGT 60.526 57.895 0.00 0.00 44.31 5.68
777 816 1.101049 CCGGATTTGCCATAGCGGTT 61.101 55.000 0.00 0.00 44.31 4.44
778 817 0.029300 CGGATTTGCCATAGCGGTTG 59.971 55.000 0.00 0.00 44.31 3.77
779 818 0.249031 GGATTTGCCATAGCGGTTGC 60.249 55.000 0.00 0.00 44.31 4.17
780 819 0.455410 GATTTGCCATAGCGGTTGCA 59.545 50.000 0.00 0.00 46.23 4.08
781 820 0.457035 ATTTGCCATAGCGGTTGCAG 59.543 50.000 0.00 0.00 46.23 4.41
782 821 1.594194 TTTGCCATAGCGGTTGCAGG 61.594 55.000 0.00 0.00 46.23 4.85
783 822 2.438434 GCCATAGCGGTTGCAGGT 60.438 61.111 0.00 0.00 46.23 4.00
784 823 2.764314 GCCATAGCGGTTGCAGGTG 61.764 63.158 0.00 0.00 46.23 4.00
785 824 2.764314 CCATAGCGGTTGCAGGTGC 61.764 63.158 0.00 0.00 46.23 5.01
786 825 1.746615 CATAGCGGTTGCAGGTGCT 60.747 57.895 12.36 12.36 46.23 4.40
787 826 1.450312 ATAGCGGTTGCAGGTGCTC 60.450 57.895 11.27 0.00 46.23 4.26
788 827 1.903877 ATAGCGGTTGCAGGTGCTCT 61.904 55.000 11.27 0.88 46.23 4.09
789 828 2.111999 TAGCGGTTGCAGGTGCTCTT 62.112 55.000 11.27 0.00 46.23 2.85
790 829 1.671054 GCGGTTGCAGGTGCTCTTA 60.671 57.895 3.18 0.00 42.66 2.10
791 830 1.639298 GCGGTTGCAGGTGCTCTTAG 61.639 60.000 3.18 0.00 42.66 2.18
792 831 1.639298 CGGTTGCAGGTGCTCTTAGC 61.639 60.000 3.18 0.00 42.82 3.09
793 832 1.639298 GGTTGCAGGTGCTCTTAGCG 61.639 60.000 3.18 0.00 46.26 4.26
794 833 0.951040 GTTGCAGGTGCTCTTAGCGT 60.951 55.000 3.18 0.00 46.26 5.07
795 834 0.950555 TTGCAGGTGCTCTTAGCGTG 60.951 55.000 3.18 0.00 46.26 5.34
796 835 1.374758 GCAGGTGCTCTTAGCGTGT 60.375 57.895 0.00 0.00 46.26 4.49
797 836 1.630244 GCAGGTGCTCTTAGCGTGTG 61.630 60.000 0.00 0.00 46.26 3.82
798 837 1.374758 AGGTGCTCTTAGCGTGTGC 60.375 57.895 0.00 0.00 46.26 4.57
799 838 2.391389 GGTGCTCTTAGCGTGTGCC 61.391 63.158 0.00 0.00 46.26 5.01
800 839 1.667830 GTGCTCTTAGCGTGTGCCA 60.668 57.895 0.00 0.00 46.26 4.92
801 840 1.021390 GTGCTCTTAGCGTGTGCCAT 61.021 55.000 0.00 0.00 46.26 4.40
802 841 1.020861 TGCTCTTAGCGTGTGCCATG 61.021 55.000 0.00 0.00 46.26 3.66
803 842 0.740868 GCTCTTAGCGTGTGCCATGA 60.741 55.000 0.00 0.00 44.31 3.07
804 843 1.725641 CTCTTAGCGTGTGCCATGAA 58.274 50.000 0.00 0.00 44.31 2.57
805 844 2.076100 CTCTTAGCGTGTGCCATGAAA 58.924 47.619 0.00 0.00 44.31 2.69
806 845 2.679837 CTCTTAGCGTGTGCCATGAAAT 59.320 45.455 0.00 0.00 44.31 2.17
807 846 2.419673 TCTTAGCGTGTGCCATGAAATG 59.580 45.455 0.00 0.00 46.21 2.32
808 847 2.106477 TAGCGTGTGCCATGAAATGA 57.894 45.000 0.00 0.00 46.28 2.57
809 848 0.806868 AGCGTGTGCCATGAAATGAG 59.193 50.000 0.00 0.00 46.28 2.90
810 849 1.611410 AGCGTGTGCCATGAAATGAGA 60.611 47.619 0.00 0.00 46.28 3.27
811 850 2.942752 AGCGTGTGCCATGAAATGAGAT 60.943 45.455 0.00 0.00 46.28 2.75
812 851 4.431777 AGCGTGTGCCATGAAATGAGATT 61.432 43.478 0.00 0.00 46.28 2.40
813 852 5.880584 AGCGTGTGCCATGAAATGAGATTT 61.881 41.667 0.00 0.00 46.28 2.17
814 853 6.605225 AGCGTGTGCCATGAAATGAGATTTA 61.605 40.000 0.00 0.00 46.28 1.40
815 854 7.852531 AGCGTGTGCCATGAAATGAGATTTAT 61.853 38.462 0.00 0.00 46.28 1.40
816 855 9.238319 AGCGTGTGCCATGAAATGAGATTTATT 62.238 37.037 0.00 0.00 46.28 1.40
855 894 1.535462 CAACAAGTGGCGGGTAAGAAG 59.465 52.381 0.00 0.00 0.00 2.85
861 900 1.814169 GGCGGGTAAGAAGCGGAAG 60.814 63.158 0.00 0.00 0.00 3.46
875 914 2.747686 GAAGGTGACGGGGCAGAA 59.252 61.111 0.00 0.00 0.00 3.02
895 934 3.546543 GGATGACGGGATGGCCGA 61.547 66.667 0.00 0.00 33.83 5.54
941 980 2.725008 GTCCGCATCCTCTCTCCG 59.275 66.667 0.00 0.00 0.00 4.63
975 1014 1.607467 CTTCCCAGCCCAAACCCAG 60.607 63.158 0.00 0.00 0.00 4.45
1153 1192 4.180946 CCGTGCCGTCTCCTCGAG 62.181 72.222 5.13 5.13 0.00 4.04
1154 1193 3.432588 CGTGCCGTCTCCTCGAGT 61.433 66.667 12.31 0.00 0.00 4.18
1298 1337 2.930019 CAGGTGGTCAGGAGGGCA 60.930 66.667 0.00 0.00 0.00 5.36
1465 1519 1.135721 TGCGGACTCTGTCTCATGATG 59.864 52.381 0.00 0.00 32.47 3.07
1641 1696 9.383519 TCTCAAAATACAGTGGAGAATTGTATC 57.616 33.333 0.00 0.00 39.92 2.24
1649 1704 5.289675 CAGTGGAGAATTGTATCGTGTCTTC 59.710 44.000 0.00 0.00 0.00 2.87
1673 1731 7.851508 TCTGTTTCTTTGAGTCATTAAACGAG 58.148 34.615 15.22 13.70 31.19 4.18
1679 1737 2.991190 TGAGTCATTAAACGAGTTCCGC 59.009 45.455 0.00 0.00 43.32 5.54
1817 1875 0.548682 ACAAGCATCCTGAGGTCCCT 60.549 55.000 0.00 0.00 0.00 4.20
1884 1942 4.040047 AGGTCTGGATTACACCATCATCA 58.960 43.478 0.00 0.00 39.34 3.07
1928 1986 0.918983 ATGCGATCCTTTTCCTGGGA 59.081 50.000 0.00 0.00 35.96 4.37
1939 1997 3.502123 TTTCCTGGGATTCTGTTTCGT 57.498 42.857 0.00 0.00 0.00 3.85
2019 2077 0.598065 CCTTGCTAAACCACCTGTGC 59.402 55.000 0.00 0.00 0.00 4.57
2020 2078 0.238289 CTTGCTAAACCACCTGTGCG 59.762 55.000 0.00 0.00 0.00 5.34
2024 2082 1.305201 CTAAACCACCTGTGCGTTGT 58.695 50.000 5.35 0.00 0.00 3.32
2030 2088 1.876799 CCACCTGTGCGTTGTTCATAA 59.123 47.619 0.00 0.00 0.00 1.90
2032 2090 3.426159 CCACCTGTGCGTTGTTCATAATC 60.426 47.826 0.00 0.00 0.00 1.75
2073 2208 9.338622 ACAAGTAGTAAAAGTTAAAGCACTGAT 57.661 29.630 0.00 0.00 0.00 2.90
2074 2209 9.813080 CAAGTAGTAAAAGTTAAAGCACTGATC 57.187 33.333 0.00 0.00 0.00 2.92
2109 2329 6.915544 TGAAAGCTCATGTCATACATCTTC 57.084 37.500 0.00 0.00 36.53 2.87
2290 2510 5.079643 TCTTTTCTCCCTTTCCATTGGAAG 58.920 41.667 17.29 11.74 43.06 3.46
2337 2558 4.707448 CCAGTCTCTCTCCAAAGTAGCTTA 59.293 45.833 0.00 0.00 0.00 3.09
2348 2569 3.662247 AAGTAGCTTACTGTTGACGCT 57.338 42.857 0.00 0.00 39.39 5.07
2477 2698 6.702329 ACAACTCAGGAGGTAATTAACTCTG 58.298 40.000 25.84 20.98 34.22 3.35
2508 2729 8.880991 TTTTTAGACTAGACATAGTGGAGAGT 57.119 34.615 0.00 0.00 42.46 3.24
2509 2730 9.970553 TTTTTAGACTAGACATAGTGGAGAGTA 57.029 33.333 0.00 0.00 42.46 2.59
2510 2731 9.970553 TTTTAGACTAGACATAGTGGAGAGTAA 57.029 33.333 0.00 0.00 42.46 2.24
2511 2732 8.961294 TTAGACTAGACATAGTGGAGAGTAAC 57.039 38.462 0.00 0.00 42.46 2.50
2512 2733 7.202972 AGACTAGACATAGTGGAGAGTAACT 57.797 40.000 0.00 0.00 42.46 2.24
2513 2734 7.635648 AGACTAGACATAGTGGAGAGTAACTT 58.364 38.462 0.00 0.00 42.46 2.66
2514 2735 8.770322 AGACTAGACATAGTGGAGAGTAACTTA 58.230 37.037 0.00 0.00 42.46 2.24
2515 2736 8.735692 ACTAGACATAGTGGAGAGTAACTTAC 57.264 38.462 0.00 0.00 40.84 2.34
2516 2737 8.327271 ACTAGACATAGTGGAGAGTAACTTACA 58.673 37.037 0.00 0.00 40.84 2.41
2517 2738 7.393841 AGACATAGTGGAGAGTAACTTACAC 57.606 40.000 1.79 0.00 37.19 2.90
2518 2739 7.176490 AGACATAGTGGAGAGTAACTTACACT 58.824 38.462 0.00 0.00 43.80 3.55
2519 2740 8.327271 AGACATAGTGGAGAGTAACTTACACTA 58.673 37.037 0.00 0.00 44.75 2.74
2520 2741 8.508883 ACATAGTGGAGAGTAACTTACACTAG 57.491 38.462 0.00 0.00 44.34 2.57
2521 2742 8.108364 ACATAGTGGAGAGTAACTTACACTAGT 58.892 37.037 0.00 0.00 44.34 2.57
2522 2743 9.610705 CATAGTGGAGAGTAACTTACACTAGTA 57.389 37.037 0.00 0.00 44.34 1.82
2524 2745 8.334263 AGTGGAGAGTAACTTACACTAGTAAC 57.666 38.462 0.00 0.00 41.63 2.50
2525 2746 7.941238 AGTGGAGAGTAACTTACACTAGTAACA 59.059 37.037 0.00 0.00 41.63 2.41
2526 2747 8.738106 GTGGAGAGTAACTTACACTAGTAACAT 58.262 37.037 0.00 0.00 35.37 2.71
2527 2748 9.964354 TGGAGAGTAACTTACACTAGTAACATA 57.036 33.333 0.00 0.00 35.37 2.29
2531 2752 9.483062 GAGTAACTTACACTAGTAACATACACG 57.517 37.037 0.00 0.00 35.37 4.49
2532 2753 7.965107 AGTAACTTACACTAGTAACATACACGC 59.035 37.037 0.00 0.00 35.37 5.34
2533 2754 6.506500 ACTTACACTAGTAACATACACGCT 57.493 37.500 0.00 0.00 35.37 5.07
2534 2755 7.615582 ACTTACACTAGTAACATACACGCTA 57.384 36.000 0.00 0.00 35.37 4.26
2535 2756 7.467623 ACTTACACTAGTAACATACACGCTAC 58.532 38.462 0.00 0.00 35.37 3.58
2536 2757 5.240713 ACACTAGTAACATACACGCTACC 57.759 43.478 0.00 0.00 0.00 3.18
2537 2758 4.096984 ACACTAGTAACATACACGCTACCC 59.903 45.833 0.00 0.00 0.00 3.69
2538 2759 4.337555 CACTAGTAACATACACGCTACCCT 59.662 45.833 0.00 0.00 0.00 4.34
2539 2760 5.528690 CACTAGTAACATACACGCTACCCTA 59.471 44.000 0.00 0.00 0.00 3.53
2540 2761 5.762218 ACTAGTAACATACACGCTACCCTAG 59.238 44.000 0.00 0.00 0.00 3.02
2541 2762 3.887716 AGTAACATACACGCTACCCTAGG 59.112 47.826 0.06 0.06 0.00 3.02
2542 2763 1.038280 ACATACACGCTACCCTAGGC 58.962 55.000 2.05 0.00 0.00 3.93
2543 2764 1.329256 CATACACGCTACCCTAGGCT 58.671 55.000 2.05 0.00 0.00 4.58
2544 2765 2.158564 ACATACACGCTACCCTAGGCTA 60.159 50.000 2.05 0.00 0.00 3.93
2545 2766 2.965671 TACACGCTACCCTAGGCTAT 57.034 50.000 2.05 0.00 0.00 2.97
2546 2767 1.329256 ACACGCTACCCTAGGCTATG 58.671 55.000 2.05 0.00 0.00 2.23
2547 2768 1.329256 CACGCTACCCTAGGCTATGT 58.671 55.000 2.05 0.00 0.00 2.29
2548 2769 1.687123 CACGCTACCCTAGGCTATGTT 59.313 52.381 2.05 0.00 0.00 2.71
2549 2770 2.889045 CACGCTACCCTAGGCTATGTTA 59.111 50.000 2.05 0.00 0.00 2.41
2550 2771 2.889678 ACGCTACCCTAGGCTATGTTAC 59.110 50.000 2.05 0.00 0.00 2.50
2551 2772 3.155501 CGCTACCCTAGGCTATGTTACT 58.844 50.000 2.05 0.00 0.00 2.24
2552 2773 4.202503 ACGCTACCCTAGGCTATGTTACTA 60.203 45.833 2.05 0.00 0.00 1.82
2553 2774 4.155644 CGCTACCCTAGGCTATGTTACTAC 59.844 50.000 2.05 0.00 0.00 2.73
2554 2775 4.462132 GCTACCCTAGGCTATGTTACTACC 59.538 50.000 2.05 0.00 0.00 3.18
2555 2776 4.828875 ACCCTAGGCTATGTTACTACCT 57.171 45.455 2.05 0.00 34.42 3.08
2556 2777 5.153670 ACCCTAGGCTATGTTACTACCTT 57.846 43.478 2.05 0.00 31.79 3.50
2557 2778 5.146298 ACCCTAGGCTATGTTACTACCTTC 58.854 45.833 2.05 0.00 31.79 3.46
2558 2779 5.145564 CCCTAGGCTATGTTACTACCTTCA 58.854 45.833 2.05 0.00 31.79 3.02
2559 2780 5.780793 CCCTAGGCTATGTTACTACCTTCAT 59.219 44.000 2.05 0.00 31.79 2.57
2560 2781 6.952358 CCCTAGGCTATGTTACTACCTTCATA 59.048 42.308 2.05 0.00 31.79 2.15
2561 2782 7.122948 CCCTAGGCTATGTTACTACCTTCATAG 59.877 44.444 2.05 0.00 41.20 2.23
2562 2783 7.670559 CCTAGGCTATGTTACTACCTTCATAGT 59.329 40.741 0.00 0.00 40.70 2.12
2563 2784 7.291411 AGGCTATGTTACTACCTTCATAGTG 57.709 40.000 11.05 0.00 40.70 2.74
2564 2785 6.267928 AGGCTATGTTACTACCTTCATAGTGG 59.732 42.308 11.05 0.00 40.70 4.00
2565 2786 6.456501 GCTATGTTACTACCTTCATAGTGGG 58.543 44.000 11.05 0.00 40.70 4.61
2566 2787 6.041751 GCTATGTTACTACCTTCATAGTGGGT 59.958 42.308 11.05 0.00 40.70 4.51
2567 2788 7.232127 GCTATGTTACTACCTTCATAGTGGGTA 59.768 40.741 11.05 0.00 40.70 3.69
2572 2793 5.532664 CTACCTTCATAGTGGGTAGGAAC 57.467 47.826 9.71 0.00 45.09 3.62
2573 2794 3.798515 ACCTTCATAGTGGGTAGGAACA 58.201 45.455 0.00 0.00 28.58 3.18
2574 2795 4.371681 ACCTTCATAGTGGGTAGGAACAT 58.628 43.478 0.00 0.00 28.58 2.71
2575 2796 5.535029 ACCTTCATAGTGGGTAGGAACATA 58.465 41.667 0.00 0.00 28.58 2.29
2576 2797 6.151049 ACCTTCATAGTGGGTAGGAACATAT 58.849 40.000 0.00 0.00 28.58 1.78
2577 2798 6.043243 ACCTTCATAGTGGGTAGGAACATATG 59.957 42.308 0.00 0.00 28.58 1.78
2578 2799 6.043243 CCTTCATAGTGGGTAGGAACATATGT 59.957 42.308 1.41 1.41 28.58 2.29
2579 2800 6.419484 TCATAGTGGGTAGGAACATATGTG 57.581 41.667 9.63 0.00 0.00 3.21
2580 2801 5.903010 TCATAGTGGGTAGGAACATATGTGT 59.097 40.000 9.63 0.00 41.28 3.72
2581 2802 7.070629 TCATAGTGGGTAGGAACATATGTGTA 58.929 38.462 9.63 0.00 37.67 2.90
2582 2803 5.871396 AGTGGGTAGGAACATATGTGTAG 57.129 43.478 9.63 0.00 37.67 2.74
2583 2804 5.278061 AGTGGGTAGGAACATATGTGTAGT 58.722 41.667 9.63 0.00 37.67 2.73
2584 2805 5.128827 AGTGGGTAGGAACATATGTGTAGTG 59.871 44.000 9.63 0.00 37.67 2.74
2585 2806 5.027460 TGGGTAGGAACATATGTGTAGTGT 58.973 41.667 9.63 0.00 37.67 3.55
2586 2807 5.128171 TGGGTAGGAACATATGTGTAGTGTC 59.872 44.000 9.63 1.64 37.67 3.67
2587 2808 5.128171 GGGTAGGAACATATGTGTAGTGTCA 59.872 44.000 9.63 0.00 37.67 3.58
2588 2809 6.183360 GGGTAGGAACATATGTGTAGTGTCAT 60.183 42.308 9.63 2.26 37.67 3.06
2589 2810 6.701841 GGTAGGAACATATGTGTAGTGTCATG 59.298 42.308 9.63 0.00 37.67 3.07
2590 2811 5.118990 AGGAACATATGTGTAGTGTCATGC 58.881 41.667 9.63 0.00 37.67 4.06
2591 2812 4.875536 GGAACATATGTGTAGTGTCATGCA 59.124 41.667 9.63 0.00 37.67 3.96
2592 2813 5.353956 GGAACATATGTGTAGTGTCATGCAA 59.646 40.000 9.63 0.00 37.67 4.08
2593 2814 6.128035 GGAACATATGTGTAGTGTCATGCAAA 60.128 38.462 9.63 0.00 37.67 3.68
2594 2815 6.426980 ACATATGTGTAGTGTCATGCAAAG 57.573 37.500 7.78 0.00 36.63 2.77
2595 2816 3.837213 ATGTGTAGTGTCATGCAAAGC 57.163 42.857 0.00 0.00 0.00 3.51
2596 2817 2.849942 TGTGTAGTGTCATGCAAAGCT 58.150 42.857 0.00 0.00 0.00 3.74
2597 2818 3.213506 TGTGTAGTGTCATGCAAAGCTT 58.786 40.909 0.00 0.00 0.00 3.74
2598 2819 3.250762 TGTGTAGTGTCATGCAAAGCTTC 59.749 43.478 0.00 0.00 0.00 3.86
2599 2820 3.250762 GTGTAGTGTCATGCAAAGCTTCA 59.749 43.478 0.00 0.00 0.00 3.02
2600 2821 4.074259 TGTAGTGTCATGCAAAGCTTCAT 58.926 39.130 0.00 0.00 0.00 2.57
2601 2822 4.520111 TGTAGTGTCATGCAAAGCTTCATT 59.480 37.500 0.00 0.00 0.00 2.57
2602 2823 5.704978 TGTAGTGTCATGCAAAGCTTCATTA 59.295 36.000 0.00 0.00 0.00 1.90
2603 2824 5.909621 AGTGTCATGCAAAGCTTCATTAT 57.090 34.783 0.00 0.00 0.00 1.28
2604 2825 6.276832 AGTGTCATGCAAAGCTTCATTATT 57.723 33.333 0.00 0.00 0.00 1.40
2605 2826 7.395190 AGTGTCATGCAAAGCTTCATTATTA 57.605 32.000 0.00 0.00 0.00 0.98
2606 2827 7.478322 AGTGTCATGCAAAGCTTCATTATTAG 58.522 34.615 0.00 0.00 0.00 1.73
2607 2828 6.694411 GTGTCATGCAAAGCTTCATTATTAGG 59.306 38.462 0.00 0.00 0.00 2.69
2608 2829 6.377996 TGTCATGCAAAGCTTCATTATTAGGT 59.622 34.615 0.00 0.00 0.00 3.08
2609 2830 7.093814 TGTCATGCAAAGCTTCATTATTAGGTT 60.094 33.333 0.00 0.00 33.84 3.50
2610 2831 8.405531 GTCATGCAAAGCTTCATTATTAGGTTA 58.594 33.333 0.00 0.00 32.28 2.85
2611 2832 9.135189 TCATGCAAAGCTTCATTATTAGGTTAT 57.865 29.630 0.00 0.00 32.28 1.89
2614 2835 9.845740 TGCAAAGCTTCATTATTAGGTTATAGA 57.154 29.630 0.00 0.00 32.28 1.98
2630 2851 7.967908 AGGTTATAGACTCATATTGTCTTGGG 58.032 38.462 11.88 0.00 41.45 4.12
2631 2852 7.789831 AGGTTATAGACTCATATTGTCTTGGGA 59.210 37.037 11.88 0.00 41.45 4.37
2632 2853 8.598041 GGTTATAGACTCATATTGTCTTGGGAT 58.402 37.037 11.88 4.53 41.45 3.85
2636 2857 7.623999 AGACTCATATTGTCTTGGGATATGT 57.376 36.000 3.08 0.00 41.45 2.29
2637 2858 7.448420 AGACTCATATTGTCTTGGGATATGTG 58.552 38.462 3.08 0.00 41.45 3.21
2638 2859 7.290948 AGACTCATATTGTCTTGGGATATGTGA 59.709 37.037 10.03 0.00 41.45 3.58
2639 2860 7.982252 ACTCATATTGTCTTGGGATATGTGAT 58.018 34.615 10.03 0.00 35.96 3.06
2640 2861 7.881751 ACTCATATTGTCTTGGGATATGTGATG 59.118 37.037 10.03 0.00 35.96 3.07
2641 2862 7.748677 TCATATTGTCTTGGGATATGTGATGT 58.251 34.615 0.00 0.00 35.96 3.06
2642 2863 8.219868 TCATATTGTCTTGGGATATGTGATGTT 58.780 33.333 0.00 0.00 35.96 2.71
2643 2864 9.506018 CATATTGTCTTGGGATATGTGATGTTA 57.494 33.333 0.00 0.00 31.99 2.41
2644 2865 7.807977 ATTGTCTTGGGATATGTGATGTTAC 57.192 36.000 0.00 0.00 0.00 2.50
2645 2866 5.356426 TGTCTTGGGATATGTGATGTTACG 58.644 41.667 0.00 0.00 0.00 3.18
2646 2867 5.128008 TGTCTTGGGATATGTGATGTTACGA 59.872 40.000 0.00 0.00 0.00 3.43
2647 2868 6.183360 TGTCTTGGGATATGTGATGTTACGAT 60.183 38.462 0.00 0.00 0.00 3.73
2648 2869 7.014808 TGTCTTGGGATATGTGATGTTACGATA 59.985 37.037 0.00 0.00 0.00 2.92
2649 2870 7.870954 GTCTTGGGATATGTGATGTTACGATAA 59.129 37.037 0.00 0.00 0.00 1.75
2650 2871 7.870954 TCTTGGGATATGTGATGTTACGATAAC 59.129 37.037 0.00 0.00 0.00 1.89
2651 2872 7.297936 TGGGATATGTGATGTTACGATAACT 57.702 36.000 0.00 0.00 0.00 2.24
2652 2873 8.411991 TGGGATATGTGATGTTACGATAACTA 57.588 34.615 0.00 0.00 0.00 2.24
2653 2874 8.520351 TGGGATATGTGATGTTACGATAACTAG 58.480 37.037 0.00 0.00 0.00 2.57
2654 2875 7.488471 GGGATATGTGATGTTACGATAACTAGC 59.512 40.741 0.00 0.00 0.00 3.42
2655 2876 8.244802 GGATATGTGATGTTACGATAACTAGCT 58.755 37.037 0.00 0.00 0.00 3.32
2659 2880 7.993101 TGTGATGTTACGATAACTAGCTAAGT 58.007 34.615 0.00 0.00 41.49 2.24
2694 2915 9.809096 TTATCTCTCTCATTAACTCATTGTCAC 57.191 33.333 0.00 0.00 0.00 3.67
2695 2916 7.232118 TCTCTCTCATTAACTCATTGTCACA 57.768 36.000 0.00 0.00 0.00 3.58
2696 2917 7.845037 TCTCTCTCATTAACTCATTGTCACAT 58.155 34.615 0.00 0.00 0.00 3.21
2697 2918 8.971073 TCTCTCTCATTAACTCATTGTCACATA 58.029 33.333 0.00 0.00 0.00 2.29
2698 2919 9.247126 CTCTCTCATTAACTCATTGTCACATAG 57.753 37.037 0.00 0.00 0.00 2.23
2699 2920 8.200120 TCTCTCATTAACTCATTGTCACATAGG 58.800 37.037 0.00 0.00 0.00 2.57
2700 2921 6.763135 TCTCATTAACTCATTGTCACATAGGC 59.237 38.462 0.00 0.00 0.00 3.93
2701 2922 6.413892 TCATTAACTCATTGTCACATAGGCA 58.586 36.000 0.00 0.00 0.00 4.75
2703 2924 7.392953 TCATTAACTCATTGTCACATAGGCAAA 59.607 33.333 0.00 0.00 46.40 3.68
2704 2925 7.701539 TTAACTCATTGTCACATAGGCAAAT 57.298 32.000 0.00 0.00 46.40 2.32
2705 2926 6.594788 AACTCATTGTCACATAGGCAAATT 57.405 33.333 0.00 0.00 46.40 1.82
2706 2927 6.594788 ACTCATTGTCACATAGGCAAATTT 57.405 33.333 0.00 0.00 46.40 1.82
2707 2928 6.392354 ACTCATTGTCACATAGGCAAATTTG 58.608 36.000 14.03 14.03 46.40 2.32
2708 2929 5.170021 TCATTGTCACATAGGCAAATTTGC 58.830 37.500 30.82 30.82 46.40 3.68
2721 2942 3.645884 CAAATTTGCTGAGTTGGACCTG 58.354 45.455 5.01 0.00 0.00 4.00
2722 2943 2.957402 ATTTGCTGAGTTGGACCTGA 57.043 45.000 0.00 0.00 0.00 3.86
2723 2944 2.957402 TTTGCTGAGTTGGACCTGAT 57.043 45.000 0.00 0.00 0.00 2.90
2724 2945 2.189594 TTGCTGAGTTGGACCTGATG 57.810 50.000 0.00 0.00 0.00 3.07
2725 2946 1.059098 TGCTGAGTTGGACCTGATGT 58.941 50.000 0.00 0.00 0.00 3.06
2726 2947 1.421268 TGCTGAGTTGGACCTGATGTT 59.579 47.619 0.00 0.00 0.00 2.71
2727 2948 2.637382 TGCTGAGTTGGACCTGATGTTA 59.363 45.455 0.00 0.00 0.00 2.41
2728 2949 3.003480 GCTGAGTTGGACCTGATGTTAC 58.997 50.000 0.00 0.00 0.00 2.50
2729 2950 3.307059 GCTGAGTTGGACCTGATGTTACT 60.307 47.826 0.00 0.00 0.00 2.24
2730 2951 4.499183 CTGAGTTGGACCTGATGTTACTC 58.501 47.826 0.00 0.00 33.92 2.59
2731 2952 4.160329 TGAGTTGGACCTGATGTTACTCT 58.840 43.478 0.00 0.00 34.20 3.24
2732 2953 4.593206 TGAGTTGGACCTGATGTTACTCTT 59.407 41.667 0.00 0.00 34.20 2.85
2733 2954 4.899502 AGTTGGACCTGATGTTACTCTTG 58.100 43.478 0.00 0.00 0.00 3.02
2734 2955 4.593206 AGTTGGACCTGATGTTACTCTTGA 59.407 41.667 0.00 0.00 0.00 3.02
2735 2956 5.071788 AGTTGGACCTGATGTTACTCTTGAA 59.928 40.000 0.00 0.00 0.00 2.69
2736 2957 5.152623 TGGACCTGATGTTACTCTTGAAG 57.847 43.478 0.00 0.00 0.00 3.02
2737 2958 4.593206 TGGACCTGATGTTACTCTTGAAGT 59.407 41.667 0.00 0.00 42.33 3.01
2738 2959 5.071788 TGGACCTGATGTTACTCTTGAAGTT 59.928 40.000 0.00 0.00 39.55 2.66
2739 2960 6.269077 TGGACCTGATGTTACTCTTGAAGTTA 59.731 38.462 0.00 0.00 39.55 2.24
2740 2961 6.590677 GGACCTGATGTTACTCTTGAAGTTAC 59.409 42.308 0.00 0.00 39.55 2.50
2741 2962 7.304497 ACCTGATGTTACTCTTGAAGTTACT 57.696 36.000 0.00 0.00 38.16 2.24
2742 2963 7.379750 ACCTGATGTTACTCTTGAAGTTACTC 58.620 38.462 0.00 0.00 38.16 2.59
2743 2964 6.814146 CCTGATGTTACTCTTGAAGTTACTCC 59.186 42.308 0.00 0.00 38.16 3.85
2744 2965 6.698380 TGATGTTACTCTTGAAGTTACTCCC 58.302 40.000 0.00 0.00 38.16 4.30
2745 2966 6.269077 TGATGTTACTCTTGAAGTTACTCCCA 59.731 38.462 0.00 0.00 38.16 4.37
2746 2967 5.850614 TGTTACTCTTGAAGTTACTCCCAC 58.149 41.667 0.00 0.00 38.16 4.61
2747 2968 5.601313 TGTTACTCTTGAAGTTACTCCCACT 59.399 40.000 0.00 0.00 38.16 4.00
2748 2969 4.608948 ACTCTTGAAGTTACTCCCACTG 57.391 45.455 0.00 0.00 33.03 3.66
2749 2970 3.967987 ACTCTTGAAGTTACTCCCACTGT 59.032 43.478 0.00 0.00 33.03 3.55
2750 2971 4.202264 ACTCTTGAAGTTACTCCCACTGTG 60.202 45.833 0.00 0.00 33.03 3.66
2751 2972 3.071023 TCTTGAAGTTACTCCCACTGTGG 59.929 47.826 20.01 20.01 37.25 4.17
2752 2973 1.071699 TGAAGTTACTCCCACTGTGGC 59.928 52.381 21.47 6.54 35.79 5.01
2753 2974 0.400594 AAGTTACTCCCACTGTGGCC 59.599 55.000 21.47 0.00 35.79 5.36
2754 2975 0.766674 AGTTACTCCCACTGTGGCCA 60.767 55.000 21.47 0.00 35.79 5.36
2755 2976 0.321653 GTTACTCCCACTGTGGCCAG 60.322 60.000 21.47 19.34 44.68 4.85
2838 3059 7.166691 TGACTTGTCACTAATAAGTACTCCC 57.833 40.000 0.00 0.00 39.20 4.30
2839 3060 6.952358 TGACTTGTCACTAATAAGTACTCCCT 59.048 38.462 0.00 0.00 39.20 4.20
2840 3061 7.122353 TGACTTGTCACTAATAAGTACTCCCTC 59.878 40.741 0.00 0.00 39.20 4.30
2841 3062 6.380560 ACTTGTCACTAATAAGTACTCCCTCC 59.619 42.308 0.00 0.00 37.53 4.30
2842 3063 4.885907 TGTCACTAATAAGTACTCCCTCCG 59.114 45.833 0.00 0.00 33.48 4.63
2843 3064 4.886489 GTCACTAATAAGTACTCCCTCCGT 59.114 45.833 0.00 0.00 33.48 4.69
2844 3065 5.008514 GTCACTAATAAGTACTCCCTCCGTC 59.991 48.000 0.00 0.00 33.48 4.79
2845 3066 4.277921 CACTAATAAGTACTCCCTCCGTCC 59.722 50.000 0.00 0.00 33.48 4.79
2846 3067 3.393426 AATAAGTACTCCCTCCGTCCA 57.607 47.619 0.00 0.00 0.00 4.02
2847 3068 2.431954 TAAGTACTCCCTCCGTCCAG 57.568 55.000 0.00 0.00 0.00 3.86
2848 3069 0.702902 AAGTACTCCCTCCGTCCAGA 59.297 55.000 0.00 0.00 0.00 3.86
2849 3070 0.702902 AGTACTCCCTCCGTCCAGAA 59.297 55.000 0.00 0.00 0.00 3.02
2850 3071 1.076677 AGTACTCCCTCCGTCCAGAAA 59.923 52.381 0.00 0.00 0.00 2.52
2851 3072 2.108970 GTACTCCCTCCGTCCAGAAAT 58.891 52.381 0.00 0.00 0.00 2.17
2852 3073 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
2853 3074 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
2854 3075 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
2855 3076 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
2856 3077 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
2857 3078 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
2858 3079 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
2859 3080 3.179830 CTCCGTCCAGAAATACTTGTCG 58.820 50.000 0.00 0.00 0.00 4.35
2860 3081 2.094390 TCCGTCCAGAAATACTTGTCGG 60.094 50.000 0.00 0.00 41.47 4.79
2861 3082 2.268298 CGTCCAGAAATACTTGTCGGG 58.732 52.381 0.00 0.00 0.00 5.14
2862 3083 2.629051 GTCCAGAAATACTTGTCGGGG 58.371 52.381 0.00 0.00 30.83 5.73
2863 3084 1.557832 TCCAGAAATACTTGTCGGGGG 59.442 52.381 0.00 0.00 30.83 5.40
2864 3085 1.557832 CCAGAAATACTTGTCGGGGGA 59.442 52.381 0.00 0.00 0.00 4.81
2865 3086 2.026636 CCAGAAATACTTGTCGGGGGAA 60.027 50.000 0.00 0.00 0.00 3.97
2866 3087 3.371595 CCAGAAATACTTGTCGGGGGAAT 60.372 47.826 0.00 0.00 0.00 3.01
2867 3088 3.627577 CAGAAATACTTGTCGGGGGAATG 59.372 47.826 0.00 0.00 0.00 2.67
2868 3089 2.729028 AATACTTGTCGGGGGAATGG 57.271 50.000 0.00 0.00 0.00 3.16
2869 3090 1.887797 ATACTTGTCGGGGGAATGGA 58.112 50.000 0.00 0.00 0.00 3.41
2870 3091 1.887797 TACTTGTCGGGGGAATGGAT 58.112 50.000 0.00 0.00 0.00 3.41
2871 3092 0.255890 ACTTGTCGGGGGAATGGATG 59.744 55.000 0.00 0.00 0.00 3.51
2872 3093 0.255890 CTTGTCGGGGGAATGGATGT 59.744 55.000 0.00 0.00 0.00 3.06
2873 3094 1.488812 CTTGTCGGGGGAATGGATGTA 59.511 52.381 0.00 0.00 0.00 2.29
2874 3095 1.814429 TGTCGGGGGAATGGATGTAT 58.186 50.000 0.00 0.00 0.00 2.29
2875 3096 1.697432 TGTCGGGGGAATGGATGTATC 59.303 52.381 0.00 0.00 0.00 2.24
2876 3097 1.978580 GTCGGGGGAATGGATGTATCT 59.021 52.381 0.00 0.00 0.00 1.98
2877 3098 3.170717 GTCGGGGGAATGGATGTATCTA 58.829 50.000 0.00 0.00 0.00 1.98
2878 3099 3.195825 GTCGGGGGAATGGATGTATCTAG 59.804 52.174 0.00 0.00 0.00 2.43
2879 3100 3.076937 TCGGGGGAATGGATGTATCTAGA 59.923 47.826 0.00 0.00 0.00 2.43
2880 3101 3.195825 CGGGGGAATGGATGTATCTAGAC 59.804 52.174 0.00 0.00 0.00 2.59
2881 3102 3.195825 GGGGGAATGGATGTATCTAGACG 59.804 52.174 0.00 0.00 0.00 4.18
2882 3103 3.833070 GGGGAATGGATGTATCTAGACGT 59.167 47.826 0.00 0.00 0.00 4.34
2883 3104 5.014858 GGGGAATGGATGTATCTAGACGTA 58.985 45.833 0.00 0.00 0.00 3.57
2884 3105 5.657302 GGGGAATGGATGTATCTAGACGTAT 59.343 44.000 0.00 0.00 0.00 3.06
2885 3106 6.154706 GGGGAATGGATGTATCTAGACGTATT 59.845 42.308 0.00 0.00 0.00 1.89
2886 3107 7.310485 GGGGAATGGATGTATCTAGACGTATTT 60.310 40.741 0.00 0.00 0.00 1.40
2887 3108 8.095169 GGGAATGGATGTATCTAGACGTATTTT 58.905 37.037 0.00 0.00 0.00 1.82
2903 3124 8.827677 AGACGTATTTTAGTTTTAGATGCATCC 58.172 33.333 23.06 7.42 0.00 3.51
2904 3125 8.500753 ACGTATTTTAGTTTTAGATGCATCCA 57.499 30.769 23.06 6.95 0.00 3.41
2905 3126 9.120538 ACGTATTTTAGTTTTAGATGCATCCAT 57.879 29.630 23.06 8.39 0.00 3.41
2906 3127 9.950680 CGTATTTTAGTTTTAGATGCATCCATT 57.049 29.630 23.06 7.62 0.00 3.16
2914 3135 9.812347 AGTTTTAGATGCATCCATTTATATCCA 57.188 29.630 23.06 0.00 0.00 3.41
2920 3141 8.967918 AGATGCATCCATTTATATCCATTTCTG 58.032 33.333 23.06 0.00 0.00 3.02
2921 3142 6.927416 TGCATCCATTTATATCCATTTCTGC 58.073 36.000 0.00 0.00 0.00 4.26
2922 3143 6.032094 GCATCCATTTATATCCATTTCTGCG 58.968 40.000 0.00 0.00 0.00 5.18
2923 3144 6.127925 GCATCCATTTATATCCATTTCTGCGA 60.128 38.462 0.00 0.00 0.00 5.10
2924 3145 6.801539 TCCATTTATATCCATTTCTGCGAC 57.198 37.500 0.00 0.00 0.00 5.19
2925 3146 5.408299 TCCATTTATATCCATTTCTGCGACG 59.592 40.000 0.00 0.00 0.00 5.12
2926 3147 5.390885 CCATTTATATCCATTTCTGCGACGG 60.391 44.000 0.00 0.00 0.00 4.79
2927 3148 4.594123 TTATATCCATTTCTGCGACGGA 57.406 40.909 0.00 0.00 0.00 4.69
2928 3149 2.509052 TATCCATTTCTGCGACGGAG 57.491 50.000 10.48 10.48 0.00 4.63
2929 3150 0.179073 ATCCATTTCTGCGACGGAGG 60.179 55.000 16.74 0.56 0.00 4.30
2930 3151 1.815421 CCATTTCTGCGACGGAGGG 60.815 63.158 16.74 5.78 0.00 4.30
2947 3168 5.825151 ACGGAGGGAGTAGTTAGTATAACAC 59.175 44.000 2.79 0.07 0.00 3.32
3377 3600 7.480542 CAGGTAAACATGTAAATTTAGTCACGC 59.519 37.037 0.00 0.00 0.00 5.34
3433 3656 5.640147 TGTAGTCCATCCCACTCAAAATTT 58.360 37.500 0.00 0.00 0.00 1.82
3578 3804 5.866335 AATGTTAAATGCATGTGCTTTGG 57.134 34.783 0.00 0.00 42.66 3.28
3601 3827 6.497954 TGGGAAAAGGAATGACAATTCATCTT 59.502 34.615 1.28 0.00 42.00 2.40
3626 3852 4.054671 AGAAAAGAGTCAGCAGAAAGTCG 58.945 43.478 0.00 0.00 0.00 4.18
3660 3886 4.098044 AGAACAAAAGAGAGACGTCTGTGA 59.902 41.667 25.58 0.00 30.97 3.58
3798 4024 0.685097 TTTGCCAACTCTCTACCGCT 59.315 50.000 0.00 0.00 0.00 5.52
4225 4459 4.696877 TGTGTATGAGAAGGCACAATCTTG 59.303 41.667 0.00 0.00 38.67 3.02
4230 4464 5.227569 TGAGAAGGCACAATCTTGTTAGA 57.772 39.130 0.00 0.00 39.91 2.10
4274 4508 7.781763 GACACTTTGGTCGATCTAAAAATTG 57.218 36.000 0.00 0.00 0.00 2.32
4694 5079 2.929641 TCATGTTCCAGTTGTTGCAGA 58.070 42.857 0.00 0.00 0.00 4.26
4775 5160 2.298610 GTAACTTATTGGCTCTGGGGC 58.701 52.381 0.00 0.00 41.27 5.80
4950 5335 9.694137 AACGATCTTATATTAGTTTACAGAGGC 57.306 33.333 0.00 0.00 0.00 4.70
4951 5336 8.857098 ACGATCTTATATTAGTTTACAGAGGCA 58.143 33.333 0.00 0.00 0.00 4.75
4973 5358 7.172703 AGGCAGTACAAGTTTATACTTTGTGTC 59.827 37.037 0.00 0.00 41.85 3.67
4991 5376 2.025037 TGTCCTGGAGCTGGCATATTTT 60.025 45.455 0.00 0.00 0.00 1.82
5098 5483 6.042143 CCAAACAACTAAGTTGCACTTGAAT 58.958 36.000 10.59 0.00 46.20 2.57
5183 5568 3.204382 ACTTGGTCTTTTCTTCCCAGGAA 59.796 43.478 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.224784 GTGGACACACAAACGGATAACC 59.775 50.000 0.00 0.00 46.90 2.85
1 2 3.531262 GTGGACACACAAACGGATAAC 57.469 47.619 0.00 0.00 46.90 1.89
13 14 6.591935 AGAGAGAATTAACAAAGTGGACACA 58.408 36.000 5.14 0.00 0.00 3.72
14 15 7.497925 AAGAGAGAATTAACAAAGTGGACAC 57.502 36.000 0.00 0.00 0.00 3.67
15 16 8.208224 TGTAAGAGAGAATTAACAAAGTGGACA 58.792 33.333 0.00 0.00 0.00 4.02
16 17 8.603242 TGTAAGAGAGAATTAACAAAGTGGAC 57.397 34.615 0.00 0.00 0.00 4.02
17 18 9.219603 CATGTAAGAGAGAATTAACAAAGTGGA 57.780 33.333 0.00 0.00 0.00 4.02
18 19 9.219603 TCATGTAAGAGAGAATTAACAAAGTGG 57.780 33.333 0.00 0.00 0.00 4.00
49 50 9.381033 ACATTTCATTTTTCAACAACATCTGAA 57.619 25.926 0.00 0.00 0.00 3.02
50 51 8.945481 ACATTTCATTTTTCAACAACATCTGA 57.055 26.923 0.00 0.00 0.00 3.27
65 66 9.912634 CTGGTTGTAGATGTTAACATTTCATTT 57.087 29.630 21.63 0.00 36.57 2.32
66 67 8.522830 CCTGGTTGTAGATGTTAACATTTCATT 58.477 33.333 21.63 8.61 36.57 2.57
67 68 7.362920 GCCTGGTTGTAGATGTTAACATTTCAT 60.363 37.037 21.63 11.09 36.57 2.57
68 69 6.072175 GCCTGGTTGTAGATGTTAACATTTCA 60.072 38.462 21.63 16.73 36.57 2.69
69 70 6.072175 TGCCTGGTTGTAGATGTTAACATTTC 60.072 38.462 21.63 11.42 36.57 2.17
70 71 5.772672 TGCCTGGTTGTAGATGTTAACATTT 59.227 36.000 21.63 18.25 36.57 2.32
71 72 5.321102 TGCCTGGTTGTAGATGTTAACATT 58.679 37.500 21.63 13.71 36.57 2.71
72 73 4.917385 TGCCTGGTTGTAGATGTTAACAT 58.083 39.130 20.93 20.93 39.70 2.71
73 74 4.359434 TGCCTGGTTGTAGATGTTAACA 57.641 40.909 11.41 11.41 0.00 2.41
74 75 4.335594 GGATGCCTGGTTGTAGATGTTAAC 59.664 45.833 0.00 0.00 0.00 2.01
75 76 4.523083 GGATGCCTGGTTGTAGATGTTAA 58.477 43.478 0.00 0.00 0.00 2.01
76 77 3.118038 GGGATGCCTGGTTGTAGATGTTA 60.118 47.826 0.00 0.00 0.00 2.41
77 78 2.357154 GGGATGCCTGGTTGTAGATGTT 60.357 50.000 0.00 0.00 0.00 2.71
78 79 1.212935 GGGATGCCTGGTTGTAGATGT 59.787 52.381 0.00 0.00 0.00 3.06
87 88 0.712380 AAGGATTTGGGATGCCTGGT 59.288 50.000 4.35 0.00 0.00 4.00
90 91 1.925255 TGAGAAGGATTTGGGATGCCT 59.075 47.619 4.35 0.00 0.00 4.75
95 96 2.159382 GCGTTTGAGAAGGATTTGGGA 58.841 47.619 0.00 0.00 0.00 4.37
116 117 4.988716 ACAGAGTGGACCGCCCGA 62.989 66.667 0.08 0.00 37.93 5.14
124 125 0.673985 CCGTTCAGTGACAGAGTGGA 59.326 55.000 0.00 0.00 0.00 4.02
127 128 1.067212 GTGACCGTTCAGTGACAGAGT 59.933 52.381 0.00 0.00 30.10 3.24
131 132 0.456628 TTCGTGACCGTTCAGTGACA 59.543 50.000 0.00 0.00 35.01 3.58
154 159 2.005960 GAGGCGCACGTCTAGGTCAT 62.006 60.000 10.83 0.00 0.00 3.06
160 165 3.807538 GTCCGAGGCGCACGTCTA 61.808 66.667 20.75 7.12 0.00 2.59
174 179 3.140814 GGCATTTGAGGCCCGTCC 61.141 66.667 0.00 0.00 45.87 4.79
294 313 0.553862 ATATGTGGGGTTGGGTGGGA 60.554 55.000 0.00 0.00 0.00 4.37
302 321 7.031917 AGATAGGAAGGAATATATGTGGGGTT 58.968 38.462 0.00 0.00 0.00 4.11
331 350 2.967946 GCTAGGGTTTGGTCCGGCT 61.968 63.158 0.00 0.00 0.00 5.52
374 399 4.344865 TCGGGAACAGGCTTGGGC 62.345 66.667 0.00 0.00 37.82 5.36
382 407 1.080705 GGTCAGACGTCGGGAACAG 60.081 63.158 19.26 3.13 0.00 3.16
383 408 2.911484 CGGTCAGACGTCGGGAACA 61.911 63.158 22.34 0.61 0.00 3.18
410 439 4.101448 AGATCCACTGCCCGCCAC 62.101 66.667 0.00 0.00 0.00 5.01
432 461 1.362584 TGAGGGATCTGGAGGTGAAGA 59.637 52.381 0.00 0.00 0.00 2.87
528 560 2.810887 GAGCGCTGTCATGCACGA 60.811 61.111 18.48 0.00 0.00 4.35
537 569 1.153549 GAAGGAATCCGAGCGCTGT 60.154 57.895 18.48 0.00 0.00 4.40
577 609 1.447317 GATCCATGCGCCATTTCGGT 61.447 55.000 4.18 0.00 36.97 4.69
580 612 1.283793 CGGATCCATGCGCCATTTC 59.716 57.895 13.41 0.00 34.26 2.17
611 643 2.887568 CCGATGAGGCAGTGACGC 60.888 66.667 0.00 0.00 0.00 5.19
625 657 4.013702 GGACTACAGCACCTCCGA 57.986 61.111 0.00 0.00 0.00 4.55
645 677 1.697772 GCGTGTGTCACCGTGTTCAA 61.698 55.000 13.14 0.00 0.00 2.69
673 712 3.114616 CCTCAGCGCGTCAACTGG 61.115 66.667 8.43 0.00 34.57 4.00
738 777 1.382695 CCCCCGAAAGCCTCTAGGA 60.383 63.158 0.00 0.00 37.39 2.94
741 780 1.688187 GGTCCCCCGAAAGCCTCTA 60.688 63.158 0.00 0.00 0.00 2.43
742 781 3.009714 GGTCCCCCGAAAGCCTCT 61.010 66.667 0.00 0.00 0.00 3.69
752 791 2.002018 TATGGCAAATCCGGTCCCCC 62.002 60.000 0.00 0.00 37.80 5.40
753 792 0.537371 CTATGGCAAATCCGGTCCCC 60.537 60.000 0.00 0.00 37.80 4.81
754 793 1.172812 GCTATGGCAAATCCGGTCCC 61.173 60.000 0.00 0.00 37.80 4.46
755 794 1.507141 CGCTATGGCAAATCCGGTCC 61.507 60.000 0.00 0.00 38.60 4.46
756 795 1.507141 CCGCTATGGCAAATCCGGTC 61.507 60.000 0.00 0.00 38.60 4.79
757 796 1.525995 CCGCTATGGCAAATCCGGT 60.526 57.895 0.00 0.00 38.60 5.28
758 797 1.101049 AACCGCTATGGCAAATCCGG 61.101 55.000 14.74 14.74 43.94 5.14
759 798 0.029300 CAACCGCTATGGCAAATCCG 59.971 55.000 0.74 0.00 43.94 4.18
760 799 0.249031 GCAACCGCTATGGCAAATCC 60.249 55.000 0.74 0.00 43.94 3.01
761 800 0.455410 TGCAACCGCTATGGCAAATC 59.545 50.000 0.74 0.00 43.94 2.17
762 801 0.457035 CTGCAACCGCTATGGCAAAT 59.543 50.000 0.74 0.00 43.94 2.32
763 802 1.594194 CCTGCAACCGCTATGGCAAA 61.594 55.000 0.74 0.00 43.94 3.68
764 803 2.045708 CCTGCAACCGCTATGGCAA 61.046 57.895 0.74 0.00 43.94 4.52
765 804 2.438254 CCTGCAACCGCTATGGCA 60.438 61.111 0.74 0.00 43.94 4.92
766 805 2.438434 ACCTGCAACCGCTATGGC 60.438 61.111 0.00 0.00 43.94 4.40
767 806 2.764314 GCACCTGCAACCGCTATGG 61.764 63.158 0.00 0.00 42.09 2.74
768 807 1.709147 GAGCACCTGCAACCGCTATG 61.709 60.000 3.60 0.00 45.16 2.23
769 808 1.450312 GAGCACCTGCAACCGCTAT 60.450 57.895 3.60 0.00 45.16 2.97
770 809 2.047274 GAGCACCTGCAACCGCTA 60.047 61.111 3.60 0.00 45.16 4.26
771 810 2.111999 TAAGAGCACCTGCAACCGCT 62.112 55.000 3.26 3.26 45.16 5.52
772 811 1.639298 CTAAGAGCACCTGCAACCGC 61.639 60.000 0.00 0.00 45.16 5.68
773 812 1.639298 GCTAAGAGCACCTGCAACCG 61.639 60.000 0.00 0.00 45.16 4.44
774 813 1.639298 CGCTAAGAGCACCTGCAACC 61.639 60.000 0.00 0.00 42.58 3.77
775 814 0.951040 ACGCTAAGAGCACCTGCAAC 60.951 55.000 0.00 0.00 42.58 4.17
776 815 0.950555 CACGCTAAGAGCACCTGCAA 60.951 55.000 0.00 0.00 42.58 4.08
777 816 1.374631 CACGCTAAGAGCACCTGCA 60.375 57.895 0.00 0.00 42.58 4.41
778 817 1.374758 ACACGCTAAGAGCACCTGC 60.375 57.895 0.00 0.00 42.58 4.85
779 818 1.630244 GCACACGCTAAGAGCACCTG 61.630 60.000 0.00 0.00 42.58 4.00
780 819 1.374758 GCACACGCTAAGAGCACCT 60.375 57.895 0.00 0.00 42.58 4.00
781 820 2.391389 GGCACACGCTAAGAGCACC 61.391 63.158 0.00 0.00 42.58 5.01
782 821 1.667830 TGGCACACGCTAAGAGCAC 60.668 57.895 0.00 0.00 42.58 4.40
783 822 2.740438 TGGCACACGCTAAGAGCA 59.260 55.556 0.00 0.00 42.58 4.26
788 827 8.753704 TAAATCTCATTTCATGGCACACGCTAA 61.754 37.037 0.00 0.00 35.66 3.09
789 828 7.350027 TAAATCTCATTTCATGGCACACGCTA 61.350 38.462 0.00 0.00 35.66 4.26
790 829 6.605225 TAAATCTCATTTCATGGCACACGCT 61.605 40.000 0.00 0.00 35.66 5.07
791 830 4.438608 TAAATCTCATTTCATGGCACACGC 60.439 41.667 0.00 0.00 35.66 5.34
792 831 5.233957 TAAATCTCATTTCATGGCACACG 57.766 39.130 0.00 0.00 35.66 4.49
793 832 7.486647 AGAATAAATCTCATTTCATGGCACAC 58.513 34.615 0.00 0.00 34.82 3.82
794 833 7.649533 AGAATAAATCTCATTTCATGGCACA 57.350 32.000 0.00 0.00 36.59 4.57
808 847 8.470002 CCCAAATTTCGGAAAGAGAATAAATCT 58.530 33.333 9.30 0.00 42.61 2.40
809 848 7.222805 GCCCAAATTTCGGAAAGAGAATAAATC 59.777 37.037 5.96 0.00 0.00 2.17
810 849 7.041721 GCCCAAATTTCGGAAAGAGAATAAAT 58.958 34.615 5.96 0.00 0.00 1.40
811 850 6.015010 TGCCCAAATTTCGGAAAGAGAATAAA 60.015 34.615 5.96 0.00 0.00 1.40
812 851 5.478679 TGCCCAAATTTCGGAAAGAGAATAA 59.521 36.000 5.96 0.00 0.00 1.40
813 852 5.013547 TGCCCAAATTTCGGAAAGAGAATA 58.986 37.500 5.96 0.00 0.00 1.75
814 853 3.831911 TGCCCAAATTTCGGAAAGAGAAT 59.168 39.130 5.96 0.00 0.00 2.40
815 854 3.226777 TGCCCAAATTTCGGAAAGAGAA 58.773 40.909 5.96 0.00 0.00 2.87
816 855 2.870175 TGCCCAAATTTCGGAAAGAGA 58.130 42.857 5.96 0.00 0.00 3.10
817 856 3.243704 TGTTGCCCAAATTTCGGAAAGAG 60.244 43.478 5.96 1.64 0.00 2.85
818 857 2.695666 TGTTGCCCAAATTTCGGAAAGA 59.304 40.909 5.96 0.00 0.00 2.52
819 858 3.104843 TGTTGCCCAAATTTCGGAAAG 57.895 42.857 5.96 0.00 0.00 2.62
820 859 3.118592 ACTTGTTGCCCAAATTTCGGAAA 60.119 39.130 5.96 5.52 31.20 3.13
821 860 2.432510 ACTTGTTGCCCAAATTTCGGAA 59.567 40.909 5.96 0.00 31.20 4.30
822 861 2.035632 ACTTGTTGCCCAAATTTCGGA 58.964 42.857 5.96 0.00 31.20 4.55
823 862 2.134346 CACTTGTTGCCCAAATTTCGG 58.866 47.619 0.00 0.00 31.20 4.30
824 863 2.134346 CCACTTGTTGCCCAAATTTCG 58.866 47.619 0.00 0.00 31.20 3.46
825 864 1.872952 GCCACTTGTTGCCCAAATTTC 59.127 47.619 0.00 0.00 31.20 2.17
826 865 1.809651 CGCCACTTGTTGCCCAAATTT 60.810 47.619 0.00 0.00 31.20 1.82
861 900 3.047877 CGTTTCTGCCCCGTCACC 61.048 66.667 0.00 0.00 0.00 4.02
875 914 2.189521 GCCATCCCGTCATCCGTT 59.810 61.111 0.00 0.00 33.66 4.44
924 963 2.725008 CGGAGAGAGGATGCGGAC 59.275 66.667 0.00 0.00 0.00 4.79
934 973 2.043852 GGAGGAGTGGCGGAGAGA 60.044 66.667 0.00 0.00 0.00 3.10
941 980 0.106967 GAAGGGAATGGAGGAGTGGC 60.107 60.000 0.00 0.00 0.00 5.01
1298 1337 2.045131 GTCGTAGCCCTCGTCCAGT 61.045 63.158 0.00 0.00 0.00 4.00
1465 1519 2.533266 ATCAGTCACACACACAGACC 57.467 50.000 0.00 0.00 32.82 3.85
1641 1696 4.566759 TGACTCAAAGAAACAGAAGACACG 59.433 41.667 0.00 0.00 0.00 4.49
1649 1704 7.630924 ACTCGTTTAATGACTCAAAGAAACAG 58.369 34.615 11.43 10.13 0.00 3.16
1817 1875 8.539544 TCTGTACAATACTTGATCTCCATCAAA 58.460 33.333 0.00 0.00 46.35 2.69
1884 1942 1.200716 CTGCATGAAACCGCACAATCT 59.799 47.619 0.00 0.00 33.75 2.40
1928 1986 4.459337 GGAATTTCCTGGACGAAACAGAAT 59.541 41.667 8.25 0.00 38.20 2.40
1994 2052 1.269723 GGTGGTTTAGCAAGGAACTGC 59.730 52.381 0.00 0.00 40.86 4.40
2011 2069 3.426159 GGATTATGAACAACGCACAGGTG 60.426 47.826 0.00 0.00 44.94 4.00
2060 2194 8.879342 ACTATATGTCAGATCAGTGCTTTAAC 57.121 34.615 0.00 0.00 0.00 2.01
2073 2208 7.559486 ACATGAGCTTTCAACTATATGTCAGA 58.441 34.615 0.00 0.00 0.00 3.27
2074 2209 7.493645 TGACATGAGCTTTCAACTATATGTCAG 59.506 37.037 11.37 0.00 41.70 3.51
2109 2329 6.808008 ACAACCAGAAAACATGACTATGAG 57.192 37.500 0.00 0.00 37.73 2.90
2124 2344 8.576442 GGAAATTCATTTCTAGAAACAACCAGA 58.424 33.333 19.94 8.65 44.21 3.86
2126 2346 8.243961 TGGAAATTCATTTCTAGAAACAACCA 57.756 30.769 19.94 17.08 44.21 3.67
2337 2558 1.000283 CAGAGAAGGAGCGTCAACAGT 60.000 52.381 0.00 0.00 0.00 3.55
2348 2569 4.402793 GTCCTATAGTTGCACAGAGAAGGA 59.597 45.833 0.00 0.00 0.00 3.36
2487 2708 8.321621 AGTTACTCTCCACTATGTCTAGTCTA 57.678 38.462 0.00 0.00 35.99 2.59
2488 2709 7.202972 AGTTACTCTCCACTATGTCTAGTCT 57.797 40.000 0.00 0.00 35.99 3.24
2489 2710 7.868906 AAGTTACTCTCCACTATGTCTAGTC 57.131 40.000 0.00 0.00 35.99 2.59
2490 2711 8.327271 TGTAAGTTACTCTCCACTATGTCTAGT 58.673 37.037 14.00 0.00 38.79 2.57
2491 2712 8.614346 GTGTAAGTTACTCTCCACTATGTCTAG 58.386 40.741 14.00 0.00 0.00 2.43
2492 2713 8.327271 AGTGTAAGTTACTCTCCACTATGTCTA 58.673 37.037 14.00 0.00 36.88 2.59
2493 2714 7.176490 AGTGTAAGTTACTCTCCACTATGTCT 58.824 38.462 14.00 0.00 36.88 3.41
2494 2715 7.393841 AGTGTAAGTTACTCTCCACTATGTC 57.606 40.000 14.00 0.00 36.88 3.06
2495 2716 8.108364 ACTAGTGTAAGTTACTCTCCACTATGT 58.892 37.037 18.36 11.33 38.56 2.29
2496 2717 8.508883 ACTAGTGTAAGTTACTCTCCACTATG 57.491 38.462 18.36 10.87 38.56 2.23
2498 2719 9.442047 GTTACTAGTGTAAGTTACTCTCCACTA 57.558 37.037 18.36 13.19 39.09 2.74
2499 2720 7.941238 TGTTACTAGTGTAAGTTACTCTCCACT 59.059 37.037 18.36 12.81 39.09 4.00
2500 2721 8.103948 TGTTACTAGTGTAAGTTACTCTCCAC 57.896 38.462 18.36 12.21 39.09 4.02
2501 2722 8.874744 ATGTTACTAGTGTAAGTTACTCTCCA 57.125 34.615 18.36 10.53 39.09 3.86
2505 2726 9.483062 CGTGTATGTTACTAGTGTAAGTTACTC 57.517 37.037 14.00 10.39 39.09 2.59
2506 2727 7.965107 GCGTGTATGTTACTAGTGTAAGTTACT 59.035 37.037 14.00 0.00 39.09 2.24
2507 2728 7.965107 AGCGTGTATGTTACTAGTGTAAGTTAC 59.035 37.037 5.39 6.06 39.09 2.50
2508 2729 8.044060 AGCGTGTATGTTACTAGTGTAAGTTA 57.956 34.615 5.39 0.00 39.09 2.24
2509 2730 6.917533 AGCGTGTATGTTACTAGTGTAAGTT 58.082 36.000 5.39 0.00 39.09 2.66
2510 2731 6.506500 AGCGTGTATGTTACTAGTGTAAGT 57.493 37.500 5.39 0.00 39.09 2.24
2511 2732 6.909357 GGTAGCGTGTATGTTACTAGTGTAAG 59.091 42.308 5.39 0.00 39.09 2.34
2512 2733 6.183360 GGGTAGCGTGTATGTTACTAGTGTAA 60.183 42.308 5.39 0.00 36.41 2.41
2513 2734 5.296780 GGGTAGCGTGTATGTTACTAGTGTA 59.703 44.000 5.39 0.00 0.00 2.90
2514 2735 4.096984 GGGTAGCGTGTATGTTACTAGTGT 59.903 45.833 5.39 0.00 0.00 3.55
2515 2736 4.337555 AGGGTAGCGTGTATGTTACTAGTG 59.662 45.833 5.39 0.00 0.00 2.74
2516 2737 4.530875 AGGGTAGCGTGTATGTTACTAGT 58.469 43.478 0.00 0.00 0.00 2.57
2517 2738 5.180868 CCTAGGGTAGCGTGTATGTTACTAG 59.819 48.000 0.00 0.00 0.00 2.57
2518 2739 5.065914 CCTAGGGTAGCGTGTATGTTACTA 58.934 45.833 0.00 0.00 0.00 1.82
2519 2740 3.887716 CCTAGGGTAGCGTGTATGTTACT 59.112 47.826 0.00 0.00 0.00 2.24
2520 2741 3.551659 GCCTAGGGTAGCGTGTATGTTAC 60.552 52.174 11.72 0.00 0.00 2.50
2521 2742 2.624838 GCCTAGGGTAGCGTGTATGTTA 59.375 50.000 11.72 0.00 0.00 2.41
2522 2743 1.411612 GCCTAGGGTAGCGTGTATGTT 59.588 52.381 11.72 0.00 0.00 2.71
2523 2744 1.038280 GCCTAGGGTAGCGTGTATGT 58.962 55.000 11.72 0.00 0.00 2.29
2524 2745 1.329256 AGCCTAGGGTAGCGTGTATG 58.671 55.000 12.99 0.00 0.00 2.39
2525 2746 2.965671 TAGCCTAGGGTAGCGTGTAT 57.034 50.000 16.84 0.00 0.00 2.29
2526 2747 2.158564 ACATAGCCTAGGGTAGCGTGTA 60.159 50.000 24.18 3.31 33.16 2.90
2527 2748 1.329256 CATAGCCTAGGGTAGCGTGT 58.671 55.000 24.18 6.06 0.00 4.49
2528 2749 1.329256 ACATAGCCTAGGGTAGCGTG 58.671 55.000 24.18 19.46 0.00 5.34
2529 2750 2.083628 AACATAGCCTAGGGTAGCGT 57.916 50.000 24.18 19.94 0.00 5.07
2530 2751 3.155501 AGTAACATAGCCTAGGGTAGCG 58.844 50.000 24.18 19.36 0.00 4.26
2531 2752 4.462132 GGTAGTAACATAGCCTAGGGTAGC 59.538 50.000 24.18 8.04 0.00 3.58
2532 2753 5.890049 AGGTAGTAACATAGCCTAGGGTAG 58.110 45.833 24.18 17.86 0.00 3.18
2533 2754 5.937492 AGGTAGTAACATAGCCTAGGGTA 57.063 43.478 22.51 22.51 0.00 3.69
2534 2755 4.828875 AGGTAGTAACATAGCCTAGGGT 57.171 45.455 19.22 19.22 0.00 4.34
2535 2756 5.145564 TGAAGGTAGTAACATAGCCTAGGG 58.854 45.833 11.72 0.00 0.00 3.53
2536 2757 6.919775 ATGAAGGTAGTAACATAGCCTAGG 57.080 41.667 3.67 3.67 0.00 3.02
2537 2758 8.516234 CACTATGAAGGTAGTAACATAGCCTAG 58.484 40.741 0.00 0.00 43.09 3.02
2538 2759 7.450634 CCACTATGAAGGTAGTAACATAGCCTA 59.549 40.741 0.00 0.00 43.09 3.93
2539 2760 6.267928 CCACTATGAAGGTAGTAACATAGCCT 59.732 42.308 0.00 0.00 43.09 4.58
2540 2761 6.456501 CCACTATGAAGGTAGTAACATAGCC 58.543 44.000 0.00 0.00 43.09 3.93
2541 2762 6.041751 ACCCACTATGAAGGTAGTAACATAGC 59.958 42.308 0.00 0.00 43.09 2.97
2542 2763 7.598759 ACCCACTATGAAGGTAGTAACATAG 57.401 40.000 0.00 0.00 44.14 2.23
2543 2764 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
2544 2765 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
2551 2772 4.950361 TGTTCCTACCCACTATGAAGGTA 58.050 43.478 0.00 0.00 35.02 3.08
2552 2773 3.798515 TGTTCCTACCCACTATGAAGGT 58.201 45.455 0.00 0.00 37.69 3.50
2553 2774 6.043243 ACATATGTTCCTACCCACTATGAAGG 59.957 42.308 1.41 0.00 0.00 3.46
2554 2775 6.931281 CACATATGTTCCTACCCACTATGAAG 59.069 42.308 5.37 0.00 0.00 3.02
2555 2776 6.385759 ACACATATGTTCCTACCCACTATGAA 59.614 38.462 5.37 0.00 34.46 2.57
2556 2777 5.903010 ACACATATGTTCCTACCCACTATGA 59.097 40.000 5.37 0.00 34.46 2.15
2557 2778 6.174720 ACACATATGTTCCTACCCACTATG 57.825 41.667 5.37 0.00 34.46 2.23
2558 2779 7.015292 CACTACACATATGTTCCTACCCACTAT 59.985 40.741 5.37 0.00 40.48 2.12
2559 2780 6.322969 CACTACACATATGTTCCTACCCACTA 59.677 42.308 5.37 0.00 40.48 2.74
2560 2781 5.128827 CACTACACATATGTTCCTACCCACT 59.871 44.000 5.37 0.00 40.48 4.00
2561 2782 5.105064 ACACTACACATATGTTCCTACCCAC 60.105 44.000 5.37 0.00 40.48 4.61
2562 2783 5.027460 ACACTACACATATGTTCCTACCCA 58.973 41.667 5.37 0.00 40.48 4.51
2563 2784 5.128171 TGACACTACACATATGTTCCTACCC 59.872 44.000 5.37 0.00 40.48 3.69
2564 2785 6.216801 TGACACTACACATATGTTCCTACC 57.783 41.667 5.37 0.00 40.48 3.18
2565 2786 6.201044 GCATGACACTACACATATGTTCCTAC 59.799 42.308 5.37 0.00 40.48 3.18
2566 2787 6.127196 TGCATGACACTACACATATGTTCCTA 60.127 38.462 5.37 0.00 40.48 2.94
2567 2788 5.118990 GCATGACACTACACATATGTTCCT 58.881 41.667 5.37 0.00 40.48 3.36
2568 2789 4.875536 TGCATGACACTACACATATGTTCC 59.124 41.667 5.37 0.00 40.48 3.62
2569 2790 6.421377 TTGCATGACACTACACATATGTTC 57.579 37.500 5.37 0.61 40.48 3.18
2570 2791 6.623549 GCTTTGCATGACACTACACATATGTT 60.624 38.462 5.37 0.84 40.48 2.71
2571 2792 5.163723 GCTTTGCATGACACTACACATATGT 60.164 40.000 1.41 1.41 43.30 2.29
2572 2793 5.065602 AGCTTTGCATGACACTACACATATG 59.934 40.000 0.00 0.00 0.00 1.78
2573 2794 5.188434 AGCTTTGCATGACACTACACATAT 58.812 37.500 0.00 0.00 0.00 1.78
2574 2795 4.578871 AGCTTTGCATGACACTACACATA 58.421 39.130 0.00 0.00 0.00 2.29
2575 2796 3.415212 AGCTTTGCATGACACTACACAT 58.585 40.909 0.00 0.00 0.00 3.21
2576 2797 2.849942 AGCTTTGCATGACACTACACA 58.150 42.857 0.00 0.00 0.00 3.72
2577 2798 3.250762 TGAAGCTTTGCATGACACTACAC 59.749 43.478 0.00 0.00 0.00 2.90
2578 2799 3.475575 TGAAGCTTTGCATGACACTACA 58.524 40.909 0.00 0.00 0.00 2.74
2579 2800 4.691860 ATGAAGCTTTGCATGACACTAC 57.308 40.909 0.00 0.00 0.00 2.73
2580 2801 7.395190 AATAATGAAGCTTTGCATGACACTA 57.605 32.000 0.00 0.00 0.00 2.74
2581 2802 5.909621 ATAATGAAGCTTTGCATGACACT 57.090 34.783 0.00 0.00 0.00 3.55
2582 2803 6.694411 CCTAATAATGAAGCTTTGCATGACAC 59.306 38.462 0.00 0.00 0.00 3.67
2583 2804 6.377996 ACCTAATAATGAAGCTTTGCATGACA 59.622 34.615 0.00 0.00 0.00 3.58
2584 2805 6.799512 ACCTAATAATGAAGCTTTGCATGAC 58.200 36.000 0.00 0.00 0.00 3.06
2585 2806 7.408756 AACCTAATAATGAAGCTTTGCATGA 57.591 32.000 0.00 0.00 0.00 3.07
2588 2809 9.845740 TCTATAACCTAATAATGAAGCTTTGCA 57.154 29.630 0.00 0.00 0.00 4.08
2604 2825 9.090103 CCCAAGACAATATGAGTCTATAACCTA 57.910 37.037 10.51 0.00 45.11 3.08
2605 2826 7.789831 TCCCAAGACAATATGAGTCTATAACCT 59.210 37.037 10.51 0.00 45.11 3.50
2606 2827 7.963532 TCCCAAGACAATATGAGTCTATAACC 58.036 38.462 10.51 0.00 45.11 2.85
2610 2831 9.331466 ACATATCCCAAGACAATATGAGTCTAT 57.669 33.333 10.51 4.85 45.11 1.98
2611 2832 8.588472 CACATATCCCAAGACAATATGAGTCTA 58.412 37.037 10.51 0.00 45.11 2.59
2613 2834 7.445121 TCACATATCCCAAGACAATATGAGTC 58.555 38.462 8.21 1.32 37.01 3.36
2614 2835 7.379059 TCACATATCCCAAGACAATATGAGT 57.621 36.000 8.21 0.00 37.01 3.41
2615 2836 7.881751 ACATCACATATCCCAAGACAATATGAG 59.118 37.037 8.21 1.86 37.01 2.90
2616 2837 7.748677 ACATCACATATCCCAAGACAATATGA 58.251 34.615 8.21 0.00 37.01 2.15
2617 2838 7.991084 ACATCACATATCCCAAGACAATATG 57.009 36.000 0.00 0.00 38.66 1.78
2618 2839 9.507329 GTAACATCACATATCCCAAGACAATAT 57.493 33.333 0.00 0.00 0.00 1.28
2619 2840 7.655732 CGTAACATCACATATCCCAAGACAATA 59.344 37.037 0.00 0.00 0.00 1.90
2620 2841 6.483307 CGTAACATCACATATCCCAAGACAAT 59.517 38.462 0.00 0.00 0.00 2.71
2621 2842 5.815222 CGTAACATCACATATCCCAAGACAA 59.185 40.000 0.00 0.00 0.00 3.18
2622 2843 5.128008 TCGTAACATCACATATCCCAAGACA 59.872 40.000 0.00 0.00 0.00 3.41
2623 2844 5.597806 TCGTAACATCACATATCCCAAGAC 58.402 41.667 0.00 0.00 0.00 3.01
2624 2845 5.862678 TCGTAACATCACATATCCCAAGA 57.137 39.130 0.00 0.00 0.00 3.02
2625 2846 7.872993 AGTTATCGTAACATCACATATCCCAAG 59.127 37.037 9.51 0.00 0.00 3.61
2626 2847 7.732025 AGTTATCGTAACATCACATATCCCAA 58.268 34.615 9.51 0.00 0.00 4.12
2627 2848 7.297936 AGTTATCGTAACATCACATATCCCA 57.702 36.000 9.51 0.00 0.00 4.37
2628 2849 7.488471 GCTAGTTATCGTAACATCACATATCCC 59.512 40.741 9.51 0.00 0.00 3.85
2629 2850 8.244802 AGCTAGTTATCGTAACATCACATATCC 58.755 37.037 9.51 0.00 0.00 2.59
2633 2854 8.630917 ACTTAGCTAGTTATCGTAACATCACAT 58.369 33.333 0.00 0.00 31.29 3.21
2634 2855 7.993101 ACTTAGCTAGTTATCGTAACATCACA 58.007 34.615 0.00 0.00 31.29 3.58
2635 2856 8.853469 AACTTAGCTAGTTATCGTAACATCAC 57.147 34.615 6.75 0.00 45.22 3.06
2668 2889 9.809096 GTGACAATGAGTTAATGAGAGAGATAA 57.191 33.333 0.00 0.00 0.00 1.75
2669 2890 8.971073 TGTGACAATGAGTTAATGAGAGAGATA 58.029 33.333 0.00 0.00 0.00 1.98
2670 2891 7.845037 TGTGACAATGAGTTAATGAGAGAGAT 58.155 34.615 0.00 0.00 0.00 2.75
2671 2892 7.232118 TGTGACAATGAGTTAATGAGAGAGA 57.768 36.000 0.00 0.00 0.00 3.10
2672 2893 9.247126 CTATGTGACAATGAGTTAATGAGAGAG 57.753 37.037 0.00 0.00 0.00 3.20
2673 2894 8.200120 CCTATGTGACAATGAGTTAATGAGAGA 58.800 37.037 0.00 0.00 0.00 3.10
2674 2895 7.042187 GCCTATGTGACAATGAGTTAATGAGAG 60.042 40.741 0.00 0.00 0.00 3.20
2675 2896 6.763135 GCCTATGTGACAATGAGTTAATGAGA 59.237 38.462 0.00 0.00 0.00 3.27
2676 2897 6.539826 TGCCTATGTGACAATGAGTTAATGAG 59.460 38.462 0.00 0.00 0.00 2.90
2677 2898 6.413892 TGCCTATGTGACAATGAGTTAATGA 58.586 36.000 0.00 0.00 0.00 2.57
2678 2899 6.682423 TGCCTATGTGACAATGAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
2679 2900 7.701539 TTTGCCTATGTGACAATGAGTTAAT 57.298 32.000 0.00 0.00 0.00 1.40
2680 2901 7.701539 ATTTGCCTATGTGACAATGAGTTAA 57.298 32.000 0.00 0.00 0.00 2.01
2681 2902 7.701539 AATTTGCCTATGTGACAATGAGTTA 57.298 32.000 0.00 0.00 0.00 2.24
2682 2903 6.594788 AATTTGCCTATGTGACAATGAGTT 57.405 33.333 0.00 0.00 0.00 3.01
2683 2904 6.392354 CAAATTTGCCTATGTGACAATGAGT 58.608 36.000 5.01 0.00 0.00 3.41
2684 2905 6.880822 CAAATTTGCCTATGTGACAATGAG 57.119 37.500 5.01 0.00 0.00 2.90
2700 2921 3.318839 TCAGGTCCAACTCAGCAAATTTG 59.681 43.478 14.03 14.03 0.00 2.32
2701 2922 3.565307 TCAGGTCCAACTCAGCAAATTT 58.435 40.909 0.00 0.00 0.00 1.82
2702 2923 3.228188 TCAGGTCCAACTCAGCAAATT 57.772 42.857 0.00 0.00 0.00 1.82
2703 2924 2.957402 TCAGGTCCAACTCAGCAAAT 57.043 45.000 0.00 0.00 0.00 2.32
2704 2925 2.158623 ACATCAGGTCCAACTCAGCAAA 60.159 45.455 0.00 0.00 0.00 3.68
2705 2926 1.421268 ACATCAGGTCCAACTCAGCAA 59.579 47.619 0.00 0.00 0.00 3.91
2706 2927 1.059098 ACATCAGGTCCAACTCAGCA 58.941 50.000 0.00 0.00 0.00 4.41
2707 2928 2.191128 AACATCAGGTCCAACTCAGC 57.809 50.000 0.00 0.00 0.00 4.26
2708 2929 4.221703 AGAGTAACATCAGGTCCAACTCAG 59.778 45.833 0.00 0.00 36.70 3.35
2709 2930 4.160329 AGAGTAACATCAGGTCCAACTCA 58.840 43.478 0.00 0.00 36.70 3.41
2710 2931 4.810191 AGAGTAACATCAGGTCCAACTC 57.190 45.455 0.00 0.00 35.51 3.01
2711 2932 4.593206 TCAAGAGTAACATCAGGTCCAACT 59.407 41.667 0.00 0.00 0.00 3.16
2712 2933 4.894784 TCAAGAGTAACATCAGGTCCAAC 58.105 43.478 0.00 0.00 0.00 3.77
2713 2934 5.071788 ACTTCAAGAGTAACATCAGGTCCAA 59.928 40.000 0.00 0.00 36.65 3.53
2714 2935 4.593206 ACTTCAAGAGTAACATCAGGTCCA 59.407 41.667 0.00 0.00 36.65 4.02
2715 2936 5.153950 ACTTCAAGAGTAACATCAGGTCC 57.846 43.478 0.00 0.00 36.65 4.46
2716 2937 7.379750 AGTAACTTCAAGAGTAACATCAGGTC 58.620 38.462 0.00 0.00 37.72 3.85
2717 2938 7.304497 AGTAACTTCAAGAGTAACATCAGGT 57.696 36.000 0.00 0.00 37.72 4.00
2718 2939 6.814146 GGAGTAACTTCAAGAGTAACATCAGG 59.186 42.308 0.00 0.00 37.72 3.86
2719 2940 6.814146 GGGAGTAACTTCAAGAGTAACATCAG 59.186 42.308 0.00 0.00 37.72 2.90
2720 2941 6.269077 TGGGAGTAACTTCAAGAGTAACATCA 59.731 38.462 0.00 0.00 37.72 3.07
2721 2942 6.590677 GTGGGAGTAACTTCAAGAGTAACATC 59.409 42.308 0.00 0.00 37.72 3.06
2722 2943 6.270231 AGTGGGAGTAACTTCAAGAGTAACAT 59.730 38.462 0.00 0.00 37.72 2.71
2723 2944 5.601313 AGTGGGAGTAACTTCAAGAGTAACA 59.399 40.000 0.00 0.00 37.72 2.41
2724 2945 5.927115 CAGTGGGAGTAACTTCAAGAGTAAC 59.073 44.000 0.00 0.00 37.72 2.50
2725 2946 5.601313 ACAGTGGGAGTAACTTCAAGAGTAA 59.399 40.000 0.00 0.00 37.72 2.24
2726 2947 5.010719 CACAGTGGGAGTAACTTCAAGAGTA 59.989 44.000 0.00 0.00 37.72 2.59
2727 2948 3.967987 ACAGTGGGAGTAACTTCAAGAGT 59.032 43.478 0.00 0.00 41.47 3.24
2728 2949 4.310769 CACAGTGGGAGTAACTTCAAGAG 58.689 47.826 0.00 0.00 0.00 2.85
2729 2950 3.071023 CCACAGTGGGAGTAACTTCAAGA 59.929 47.826 12.40 0.00 32.67 3.02
2730 2951 3.403038 CCACAGTGGGAGTAACTTCAAG 58.597 50.000 12.40 0.00 32.67 3.02
2731 2952 2.486548 GCCACAGTGGGAGTAACTTCAA 60.487 50.000 21.77 0.00 38.19 2.69
2732 2953 1.071699 GCCACAGTGGGAGTAACTTCA 59.928 52.381 21.77 0.00 38.19 3.02
2733 2954 1.610886 GGCCACAGTGGGAGTAACTTC 60.611 57.143 21.77 0.59 38.19 3.01
2734 2955 0.400594 GGCCACAGTGGGAGTAACTT 59.599 55.000 21.77 0.00 38.19 2.66
2735 2956 0.766674 TGGCCACAGTGGGAGTAACT 60.767 55.000 21.77 0.00 38.19 2.24
2736 2957 0.321653 CTGGCCACAGTGGGAGTAAC 60.322 60.000 21.77 2.85 39.92 2.50
2737 2958 2.066340 CTGGCCACAGTGGGAGTAA 58.934 57.895 21.77 0.00 39.92 2.24
2738 2959 3.805928 CTGGCCACAGTGGGAGTA 58.194 61.111 21.77 0.00 39.92 2.59
2746 2967 3.369787 TCATTCACTATGACTGGCCACAG 60.370 47.826 0.00 0.00 38.35 3.66
2747 2968 2.571202 TCATTCACTATGACTGGCCACA 59.429 45.455 0.00 0.00 38.35 4.17
2748 2969 3.266510 TCATTCACTATGACTGGCCAC 57.733 47.619 0.00 0.00 38.35 5.01
2749 2970 3.264193 ACTTCATTCACTATGACTGGCCA 59.736 43.478 4.71 4.71 42.88 5.36
2750 2971 3.878778 ACTTCATTCACTATGACTGGCC 58.121 45.455 0.00 0.00 42.88 5.36
2812 3033 8.910944 GGGAGTACTTATTAGTGACAAGTCATA 58.089 37.037 6.15 0.00 42.18 2.15
2824 3045 4.467769 TGGACGGAGGGAGTACTTATTAG 58.532 47.826 0.00 0.00 0.00 1.73
2830 3051 0.702902 TTCTGGACGGAGGGAGTACT 59.297 55.000 0.00 0.00 0.00 2.73
2831 3052 1.553706 TTTCTGGACGGAGGGAGTAC 58.446 55.000 0.00 0.00 0.00 2.73
2832 3053 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
2833 3054 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
2834 3055 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
2835 3056 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
2836 3057 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
2837 3058 3.522553 GACAAGTATTTCTGGACGGAGG 58.477 50.000 0.00 0.00 0.00 4.30
2838 3059 3.179830 CGACAAGTATTTCTGGACGGAG 58.820 50.000 0.00 0.00 33.12 4.63
2839 3060 3.226346 CGACAAGTATTTCTGGACGGA 57.774 47.619 0.00 0.00 33.12 4.69
2840 3061 2.268298 CCGACAAGTATTTCTGGACGG 58.732 52.381 0.00 0.00 45.37 4.79
2841 3062 2.268298 CCCGACAAGTATTTCTGGACG 58.732 52.381 0.00 0.00 35.64 4.79
2842 3063 2.629051 CCCCGACAAGTATTTCTGGAC 58.371 52.381 0.00 0.00 0.00 4.02
2843 3064 1.557832 CCCCCGACAAGTATTTCTGGA 59.442 52.381 0.00 0.00 0.00 3.86
2844 3065 1.557832 TCCCCCGACAAGTATTTCTGG 59.442 52.381 0.00 0.00 0.00 3.86
2845 3066 3.343941 TTCCCCCGACAAGTATTTCTG 57.656 47.619 0.00 0.00 0.00 3.02
2846 3067 3.371595 CCATTCCCCCGACAAGTATTTCT 60.372 47.826 0.00 0.00 0.00 2.52
2847 3068 2.949644 CCATTCCCCCGACAAGTATTTC 59.050 50.000 0.00 0.00 0.00 2.17
2848 3069 2.578940 TCCATTCCCCCGACAAGTATTT 59.421 45.455 0.00 0.00 0.00 1.40
2849 3070 2.201830 TCCATTCCCCCGACAAGTATT 58.798 47.619 0.00 0.00 0.00 1.89
2850 3071 1.887797 TCCATTCCCCCGACAAGTAT 58.112 50.000 0.00 0.00 0.00 2.12
2851 3072 1.488812 CATCCATTCCCCCGACAAGTA 59.511 52.381 0.00 0.00 0.00 2.24
2852 3073 0.255890 CATCCATTCCCCCGACAAGT 59.744 55.000 0.00 0.00 0.00 3.16
2853 3074 0.255890 ACATCCATTCCCCCGACAAG 59.744 55.000 0.00 0.00 0.00 3.16
2854 3075 1.585895 TACATCCATTCCCCCGACAA 58.414 50.000 0.00 0.00 0.00 3.18
2855 3076 1.697432 GATACATCCATTCCCCCGACA 59.303 52.381 0.00 0.00 0.00 4.35
2856 3077 1.978580 AGATACATCCATTCCCCCGAC 59.021 52.381 0.00 0.00 0.00 4.79
2857 3078 2.415983 AGATACATCCATTCCCCCGA 57.584 50.000 0.00 0.00 0.00 5.14
2858 3079 3.195825 GTCTAGATACATCCATTCCCCCG 59.804 52.174 0.00 0.00 0.00 5.73
2859 3080 3.195825 CGTCTAGATACATCCATTCCCCC 59.804 52.174 0.00 0.00 0.00 5.40
2860 3081 3.833070 ACGTCTAGATACATCCATTCCCC 59.167 47.826 0.00 0.00 0.00 4.81
2861 3082 6.777213 ATACGTCTAGATACATCCATTCCC 57.223 41.667 0.00 0.00 0.00 3.97
2877 3098 8.827677 GGATGCATCTAAAACTAAAATACGTCT 58.172 33.333 25.28 0.00 0.00 4.18
2878 3099 8.609176 TGGATGCATCTAAAACTAAAATACGTC 58.391 33.333 25.28 3.59 0.00 4.34
2879 3100 8.500753 TGGATGCATCTAAAACTAAAATACGT 57.499 30.769 25.28 0.00 0.00 3.57
2880 3101 9.950680 AATGGATGCATCTAAAACTAAAATACG 57.049 29.630 25.28 0.00 0.00 3.06
2888 3109 9.812347 TGGATATAAATGGATGCATCTAAAACT 57.188 29.630 25.28 9.64 0.00 2.66
2894 3115 8.967918 CAGAAATGGATATAAATGGATGCATCT 58.032 33.333 25.28 8.95 33.50 2.90
2895 3116 7.705325 GCAGAAATGGATATAAATGGATGCATC 59.295 37.037 18.81 18.81 33.50 3.91
2896 3117 7.553334 GCAGAAATGGATATAAATGGATGCAT 58.447 34.615 0.00 0.00 35.84 3.96
2897 3118 6.349528 CGCAGAAATGGATATAAATGGATGCA 60.350 38.462 0.00 0.00 0.00 3.96
2898 3119 6.032094 CGCAGAAATGGATATAAATGGATGC 58.968 40.000 0.00 0.00 0.00 3.91
2899 3120 7.246311 GTCGCAGAAATGGATATAAATGGATG 58.754 38.462 0.00 0.00 39.69 3.51
2900 3121 6.092670 CGTCGCAGAAATGGATATAAATGGAT 59.907 38.462 0.00 0.00 39.69 3.41
2901 3122 5.408299 CGTCGCAGAAATGGATATAAATGGA 59.592 40.000 0.00 0.00 39.69 3.41
2902 3123 5.390885 CCGTCGCAGAAATGGATATAAATGG 60.391 44.000 0.00 0.00 39.69 3.16
2903 3124 5.408299 TCCGTCGCAGAAATGGATATAAATG 59.592 40.000 0.00 0.00 39.69 2.32
2904 3125 5.547465 TCCGTCGCAGAAATGGATATAAAT 58.453 37.500 0.00 0.00 39.69 1.40
2905 3126 4.951254 TCCGTCGCAGAAATGGATATAAA 58.049 39.130 0.00 0.00 39.69 1.40
2906 3127 4.556233 CTCCGTCGCAGAAATGGATATAA 58.444 43.478 0.00 0.00 39.69 0.98
2907 3128 3.056821 CCTCCGTCGCAGAAATGGATATA 60.057 47.826 0.00 0.00 39.69 0.86
2908 3129 2.289072 CCTCCGTCGCAGAAATGGATAT 60.289 50.000 0.00 0.00 39.69 1.63
2909 3130 1.068588 CCTCCGTCGCAGAAATGGATA 59.931 52.381 0.00 0.00 39.69 2.59
2910 3131 0.179073 CCTCCGTCGCAGAAATGGAT 60.179 55.000 0.00 0.00 39.69 3.41
2911 3132 1.218047 CCTCCGTCGCAGAAATGGA 59.782 57.895 0.00 0.00 39.69 3.41
2912 3133 1.815421 CCCTCCGTCGCAGAAATGG 60.815 63.158 0.00 0.00 39.69 3.16
2913 3134 0.807667 CTCCCTCCGTCGCAGAAATG 60.808 60.000 0.00 0.00 39.69 2.32
2914 3135 1.258445 ACTCCCTCCGTCGCAGAAAT 61.258 55.000 0.00 0.00 39.69 2.17
2915 3136 0.609957 TACTCCCTCCGTCGCAGAAA 60.610 55.000 0.00 0.00 39.69 2.52
2916 3137 1.001764 TACTCCCTCCGTCGCAGAA 60.002 57.895 0.00 0.00 39.69 3.02
2917 3138 1.451567 CTACTCCCTCCGTCGCAGA 60.452 63.158 0.00 0.00 0.00 4.26
2918 3139 1.313812 AACTACTCCCTCCGTCGCAG 61.314 60.000 0.00 0.00 0.00 5.18
2919 3140 0.035152 TAACTACTCCCTCCGTCGCA 60.035 55.000 0.00 0.00 0.00 5.10
2920 3141 0.662085 CTAACTACTCCCTCCGTCGC 59.338 60.000 0.00 0.00 0.00 5.19
2921 3142 2.035530 ACTAACTACTCCCTCCGTCG 57.964 55.000 0.00 0.00 0.00 5.12
2922 3143 6.017523 GTGTTATACTAACTACTCCCTCCGTC 60.018 46.154 0.00 0.00 0.00 4.79
2923 3144 5.825151 GTGTTATACTAACTACTCCCTCCGT 59.175 44.000 0.00 0.00 0.00 4.69
2924 3145 5.824624 TGTGTTATACTAACTACTCCCTCCG 59.175 44.000 0.00 0.00 0.00 4.63
2925 3146 6.832900 AGTGTGTTATACTAACTACTCCCTCC 59.167 42.308 0.00 0.00 0.00 4.30
2926 3147 7.878547 AGTGTGTTATACTAACTACTCCCTC 57.121 40.000 0.00 0.00 0.00 4.30
2927 3148 9.933240 AATAGTGTGTTATACTAACTACTCCCT 57.067 33.333 9.28 0.00 34.59 4.20
2978 3199 7.974501 TCAAAAGCAAAACAAAATGCATGAATT 59.025 25.926 0.00 0.00 44.95 2.17
2997 3218 6.532657 CCATCATTTGGTACATTCTCAAAAGC 59.467 38.462 0.00 0.00 40.99 3.51
3407 3630 3.184382 TGAGTGGGATGGACTACAAGA 57.816 47.619 0.00 0.00 0.00 3.02
3520 3746 9.793259 TTCTTCCATATTTTAGTTGTCTCAAGT 57.207 29.630 0.00 0.00 0.00 3.16
3578 3804 7.605449 TCAAGATGAATTGTCATTCCTTTTCC 58.395 34.615 0.00 0.00 44.83 3.13
3601 3827 5.431765 ACTTTCTGCTGACTCTTTTCTTCA 58.568 37.500 0.00 0.00 0.00 3.02
3626 3852 7.547722 GTCTCTCTTTTGTTCTAGAATCTTCCC 59.452 40.741 8.75 0.00 0.00 3.97
3873 4099 9.593134 CCTTCACAGGCTTTGATATATATCTAC 57.407 37.037 20.74 9.35 31.53 2.59
3924 4150 1.606531 GCTGGAGAGCACCTGGATT 59.393 57.895 0.00 0.00 45.46 3.01
4225 4459 6.094061 GGGATTCTATACACATCGCTCTAAC 58.906 44.000 0.00 0.00 0.00 2.34
4230 4464 3.057456 GTCGGGATTCTATACACATCGCT 60.057 47.826 0.00 0.00 0.00 4.93
4274 4508 3.565902 AGGACTTTTAGACTGCTTTGCAC 59.434 43.478 0.00 0.00 33.79 4.57
4468 4853 2.751837 GCCTTCTCCAAAGGGCCG 60.752 66.667 0.00 0.00 38.77 6.13
4725 5110 3.201290 CTGGAGTCTCGCTGCAATAATT 58.799 45.455 0.00 0.00 44.94 1.40
4947 5332 6.996282 ACACAAAGTATAAACTTGTACTGCCT 59.004 34.615 0.29 0.00 45.37 4.75
4949 5334 7.172703 AGGACACAAAGTATAAACTTGTACTGC 59.827 37.037 0.29 0.00 45.37 4.40
4950 5335 8.495949 CAGGACACAAAGTATAAACTTGTACTG 58.504 37.037 6.66 6.66 45.37 2.74
4951 5336 7.660208 CCAGGACACAAAGTATAAACTTGTACT 59.340 37.037 0.00 0.00 45.37 2.73
4973 5358 7.284034 CCTATATAAAAATATGCCAGCTCCAGG 59.716 40.741 0.00 0.00 0.00 4.45
5151 5536 9.286170 GGAAGAAAAGACCAAGTTACTTAGAAT 57.714 33.333 0.00 0.00 0.00 2.40
5155 5540 6.902408 TGGGAAGAAAAGACCAAGTTACTTA 58.098 36.000 0.00 0.00 0.00 2.24
5183 5568 6.070656 TGGATGGTTCACTCAAAAGATTCTT 58.929 36.000 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.