Multiple sequence alignment - TraesCS7B01G172600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G172600 chr7B 100.000 2705 0 0 1 2705 244634929 244637633 0.000000e+00 4996.0
1 TraesCS7B01G172600 chr7B 95.367 259 10 2 1 258 64894147 64894404 6.970000e-111 411.0
2 TraesCS7B01G172600 chr7A 91.171 2016 106 36 248 2213 287848122 287850115 0.000000e+00 2671.0
3 TraesCS7B01G172600 chr7A 94.667 75 4 0 2213 2287 287850146 287850220 1.700000e-22 117.0
4 TraesCS7B01G172600 chr7D 91.101 1326 81 17 914 2213 264319942 264321256 0.000000e+00 1760.0
5 TraesCS7B01G172600 chr7D 86.997 646 41 18 298 909 264318024 264318660 0.000000e+00 688.0
6 TraesCS7B01G172600 chr7D 88.496 113 11 2 2213 2325 264321287 264321397 4.700000e-28 135.0
7 TraesCS7B01G172600 chr6A 84.666 1213 167 14 752 1952 34282212 34281007 0.000000e+00 1192.0
8 TraesCS7B01G172600 chr6A 84.080 1206 168 18 760 1952 34284223 34283029 0.000000e+00 1142.0
9 TraesCS7B01G172600 chr6A 83.333 96 13 3 337 430 34273702 34273608 4.800000e-13 86.1
10 TraesCS7B01G172600 chr6A 85.542 83 10 2 349 430 34278503 34278422 4.800000e-13 86.1
11 TraesCS7B01G172600 chr6A 83.333 96 13 3 337 430 34391086 34390992 4.800000e-13 86.1
12 TraesCS7B01G172600 chr3B 84.513 1130 155 12 833 1950 780301925 780300804 0.000000e+00 1099.0
13 TraesCS7B01G172600 chr3B 97.189 249 7 0 1 249 53578236 53578484 3.220000e-114 422.0
14 TraesCS7B01G172600 chr3B 97.189 249 7 0 1 249 82041388 82041140 3.220000e-114 422.0
15 TraesCS7B01G172600 chr3B 97.189 249 7 0 1 249 726480079 726480327 3.220000e-114 422.0
16 TraesCS7B01G172600 chr3D 84.541 1132 146 14 833 1952 583169951 583168837 0.000000e+00 1094.0
17 TraesCS7B01G172600 chr3D 84.262 1131 157 13 833 1950 583284347 583283225 0.000000e+00 1083.0
18 TraesCS7B01G172600 chr3D 84.145 1129 157 14 835 1950 583181478 583180359 0.000000e+00 1074.0
19 TraesCS7B01G172600 chr3D 95.238 42 2 0 383 424 583179887 583179846 1.740000e-07 67.6
20 TraesCS7B01G172600 chr3D 95.238 42 2 0 383 424 583282758 583282717 1.740000e-07 67.6
21 TraesCS7B01G172600 chr3D 92.857 42 3 0 383 424 583185878 583185837 8.090000e-06 62.1
22 TraesCS7B01G172600 chr6B 83.171 1230 168 23 733 1952 62636099 62634899 0.000000e+00 1088.0
23 TraesCS7B01G172600 chr6B 97.590 249 6 0 1 249 527577124 527576876 6.920000e-116 427.0
24 TraesCS7B01G172600 chr4B 97.189 249 7 0 1 249 661204206 661203958 3.220000e-114 422.0
25 TraesCS7B01G172600 chr4A 97.189 249 7 0 1 249 472654171 472653923 3.220000e-114 422.0
26 TraesCS7B01G172600 chr4A 97.189 249 7 0 1 249 602731544 602731296 3.220000e-114 422.0
27 TraesCS7B01G172600 chr1B 96.429 252 9 0 1 252 328651350 328651099 1.500000e-112 416.0
28 TraesCS7B01G172600 chrUn 83.660 153 22 3 752 904 476642930 476642781 1.010000e-29 141.0
29 TraesCS7B01G172600 chrUn 82.292 96 14 3 337 430 101987963 101987869 2.230000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G172600 chr7B 244634929 244637633 2704 False 4996.0 4996 100.000000 1 2705 1 chr7B.!!$F2 2704
1 TraesCS7B01G172600 chr7A 287848122 287850220 2098 False 1394.0 2671 92.919000 248 2287 2 chr7A.!!$F1 2039
2 TraesCS7B01G172600 chr7D 264318024 264321397 3373 False 861.0 1760 88.864667 298 2325 3 chr7D.!!$F1 2027
3 TraesCS7B01G172600 chr6A 34278422 34284223 5801 True 806.7 1192 84.762667 349 1952 3 chr6A.!!$R3 1603
4 TraesCS7B01G172600 chr3B 780300804 780301925 1121 True 1099.0 1099 84.513000 833 1950 1 chr3B.!!$R2 1117
5 TraesCS7B01G172600 chr3D 583168837 583169951 1114 True 1094.0 1094 84.541000 833 1952 1 chr3D.!!$R1 1119
6 TraesCS7B01G172600 chr3D 583282717 583284347 1630 True 575.3 1083 89.750000 383 1950 2 chr3D.!!$R4 1567
7 TraesCS7B01G172600 chr3D 583179846 583181478 1632 True 570.8 1074 89.691500 383 1950 2 chr3D.!!$R3 1567
8 TraesCS7B01G172600 chr6B 62634899 62636099 1200 True 1088.0 1088 83.171000 733 1952 1 chr6B.!!$R1 1219

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
114 115 0.038526 AGCTTTCGTTGATCCGACGT 60.039 50.0 15.52 0.0 41.46 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2110 7530 0.25064 AAGCAGAGTTGTGGCTCCAG 60.251 55.0 0.0 0.0 36.76 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.981256 TTCCTTCTTGAAGGTGGTGC 58.019 50.000 23.78 0.00 40.81 5.01
21 22 1.140312 TCCTTCTTGAAGGTGGTGCT 58.860 50.000 23.78 0.00 40.81 4.40
24 25 1.610522 CTTCTTGAAGGTGGTGCTTGG 59.389 52.381 2.63 0.00 0.00 3.61
26 27 1.771854 TCTTGAAGGTGGTGCTTGGTA 59.228 47.619 0.00 0.00 0.00 3.25
27 28 1.880027 CTTGAAGGTGGTGCTTGGTAC 59.120 52.381 0.00 0.00 0.00 3.34
28 29 0.840617 TGAAGGTGGTGCTTGGTACA 59.159 50.000 0.00 0.00 0.00 2.90
30 31 0.534203 AAGGTGGTGCTTGGTACACG 60.534 55.000 0.00 0.00 39.29 4.49
31 32 1.964373 GGTGGTGCTTGGTACACGG 60.964 63.158 0.00 0.00 39.29 4.94
32 33 2.281208 TGGTGCTTGGTACACGGC 60.281 61.111 0.00 0.00 39.29 5.68
33 34 2.281208 GGTGCTTGGTACACGGCA 60.281 61.111 0.00 0.00 43.02 5.69
34 35 1.894756 GGTGCTTGGTACACGGCAA 60.895 57.895 7.30 0.00 45.66 4.52
35 36 1.281656 GTGCTTGGTACACGGCAAC 59.718 57.895 7.30 0.91 45.66 4.17
36 37 1.147376 TGCTTGGTACACGGCAACT 59.853 52.632 0.00 0.00 42.49 3.16
37 38 0.882927 TGCTTGGTACACGGCAACTC 60.883 55.000 0.00 0.00 42.49 3.01
40 41 2.030490 TTGGTACACGGCAACTCGGT 62.030 55.000 0.00 0.00 39.29 4.69
43 44 3.869473 TACACGGCAACTCGGTGGC 62.869 63.158 0.00 0.00 46.53 5.01
45 46 4.250305 ACGGCAACTCGGTGGCTT 62.250 61.111 6.94 0.00 41.74 4.35
47 48 2.644992 GGCAACTCGGTGGCTTTG 59.355 61.111 0.77 0.00 40.77 2.77
48 49 2.644992 GCAACTCGGTGGCTTTGG 59.355 61.111 0.00 0.00 28.38 3.28
59 60 2.594592 GCTTTGGAGCGTGGTGGT 60.595 61.111 0.00 0.00 39.48 4.16
60 61 2.193536 GCTTTGGAGCGTGGTGGTT 61.194 57.895 0.00 0.00 39.48 3.67
61 62 0.887387 GCTTTGGAGCGTGGTGGTTA 60.887 55.000 0.00 0.00 39.48 2.85
62 63 1.821216 CTTTGGAGCGTGGTGGTTAT 58.179 50.000 0.00 0.00 0.00 1.89
63 64 1.737793 CTTTGGAGCGTGGTGGTTATC 59.262 52.381 0.00 0.00 0.00 1.75
64 65 0.981183 TTGGAGCGTGGTGGTTATCT 59.019 50.000 0.00 0.00 0.00 1.98
65 66 0.981183 TGGAGCGTGGTGGTTATCTT 59.019 50.000 0.00 0.00 0.00 2.40
67 68 1.737793 GGAGCGTGGTGGTTATCTTTG 59.262 52.381 0.00 0.00 0.00 2.77
68 69 1.737793 GAGCGTGGTGGTTATCTTTGG 59.262 52.381 0.00 0.00 0.00 3.28
69 70 1.073284 AGCGTGGTGGTTATCTTTGGT 59.927 47.619 0.00 0.00 0.00 3.67
72 73 2.167662 GTGGTGGTTATCTTTGGTGGG 58.832 52.381 0.00 0.00 0.00 4.61
73 74 1.182667 GGTGGTTATCTTTGGTGGGC 58.817 55.000 0.00 0.00 0.00 5.36
74 75 0.808755 GTGGTTATCTTTGGTGGGCG 59.191 55.000 0.00 0.00 0.00 6.13
75 76 0.963355 TGGTTATCTTTGGTGGGCGC 60.963 55.000 0.00 0.00 0.00 6.53
76 77 0.963355 GGTTATCTTTGGTGGGCGCA 60.963 55.000 10.83 0.00 0.00 6.09
77 78 0.451783 GTTATCTTTGGTGGGCGCAG 59.548 55.000 10.83 0.00 0.00 5.18
102 103 3.165498 GGTGTGCCGTAGCTTTCG 58.835 61.111 0.00 0.00 40.80 3.46
103 104 1.666872 GGTGTGCCGTAGCTTTCGT 60.667 57.895 0.00 0.00 40.80 3.85
104 105 1.226030 GGTGTGCCGTAGCTTTCGTT 61.226 55.000 0.00 0.00 40.80 3.85
105 106 0.110823 GTGTGCCGTAGCTTTCGTTG 60.111 55.000 0.00 0.00 40.80 4.10
106 107 0.249531 TGTGCCGTAGCTTTCGTTGA 60.250 50.000 0.00 0.00 40.80 3.18
107 108 1.076332 GTGCCGTAGCTTTCGTTGAT 58.924 50.000 0.00 0.00 40.80 2.57
108 109 1.060698 GTGCCGTAGCTTTCGTTGATC 59.939 52.381 0.00 0.00 40.80 2.92
109 110 0.651031 GCCGTAGCTTTCGTTGATCC 59.349 55.000 0.00 0.00 35.50 3.36
110 111 0.921347 CCGTAGCTTTCGTTGATCCG 59.079 55.000 0.00 0.00 0.00 4.18
111 112 1.468565 CCGTAGCTTTCGTTGATCCGA 60.469 52.381 0.00 0.00 34.52 4.55
112 113 1.582502 CGTAGCTTTCGTTGATCCGAC 59.417 52.381 0.00 0.00 36.42 4.79
113 114 1.582502 GTAGCTTTCGTTGATCCGACG 59.417 52.381 11.28 11.28 42.02 5.12
114 115 0.038526 AGCTTTCGTTGATCCGACGT 60.039 50.000 15.52 0.00 41.46 4.34
115 116 0.788391 GCTTTCGTTGATCCGACGTT 59.212 50.000 15.52 0.00 41.46 3.99
116 117 1.461888 GCTTTCGTTGATCCGACGTTG 60.462 52.381 15.52 0.00 41.46 4.10
117 118 1.790623 CTTTCGTTGATCCGACGTTGT 59.209 47.619 15.52 0.00 41.46 3.32
118 119 1.855513 TTCGTTGATCCGACGTTGTT 58.144 45.000 15.52 0.00 41.46 2.83
119 120 1.133407 TCGTTGATCCGACGTTGTTG 58.867 50.000 15.52 0.00 41.46 3.33
120 121 0.162933 CGTTGATCCGACGTTGTTGG 59.837 55.000 1.30 0.00 38.40 3.77
121 122 0.110373 GTTGATCCGACGTTGTTGGC 60.110 55.000 1.30 0.00 37.04 4.52
122 123 0.533085 TTGATCCGACGTTGTTGGCA 60.533 50.000 1.30 0.00 37.04 4.92
123 124 0.321210 TGATCCGACGTTGTTGGCAT 60.321 50.000 1.30 0.00 37.04 4.40
124 125 0.802494 GATCCGACGTTGTTGGCATT 59.198 50.000 1.30 0.00 37.04 3.56
125 126 1.199097 GATCCGACGTTGTTGGCATTT 59.801 47.619 1.30 0.00 37.04 2.32
126 127 0.589223 TCCGACGTTGTTGGCATTTC 59.411 50.000 1.30 0.00 37.04 2.17
127 128 0.591170 CCGACGTTGTTGGCATTTCT 59.409 50.000 1.30 0.00 29.56 2.52
128 129 1.001815 CCGACGTTGTTGGCATTTCTT 60.002 47.619 1.30 0.00 29.56 2.52
129 130 2.307049 CGACGTTGTTGGCATTTCTTC 58.693 47.619 0.00 0.00 0.00 2.87
130 131 2.032030 CGACGTTGTTGGCATTTCTTCT 60.032 45.455 0.00 0.00 0.00 2.85
131 132 3.555518 GACGTTGTTGGCATTTCTTCTC 58.444 45.455 0.00 0.00 0.00 2.87
132 133 3.214328 ACGTTGTTGGCATTTCTTCTCT 58.786 40.909 0.00 0.00 0.00 3.10
133 134 3.632145 ACGTTGTTGGCATTTCTTCTCTT 59.368 39.130 0.00 0.00 0.00 2.85
134 135 4.819630 ACGTTGTTGGCATTTCTTCTCTTA 59.180 37.500 0.00 0.00 0.00 2.10
135 136 5.473504 ACGTTGTTGGCATTTCTTCTCTTAT 59.526 36.000 0.00 0.00 0.00 1.73
136 137 6.016276 ACGTTGTTGGCATTTCTTCTCTTATT 60.016 34.615 0.00 0.00 0.00 1.40
137 138 6.863126 CGTTGTTGGCATTTCTTCTCTTATTT 59.137 34.615 0.00 0.00 0.00 1.40
138 139 7.382218 CGTTGTTGGCATTTCTTCTCTTATTTT 59.618 33.333 0.00 0.00 0.00 1.82
139 140 8.703336 GTTGTTGGCATTTCTTCTCTTATTTTC 58.297 33.333 0.00 0.00 0.00 2.29
140 141 8.181904 TGTTGGCATTTCTTCTCTTATTTTCT 57.818 30.769 0.00 0.00 0.00 2.52
141 142 8.299570 TGTTGGCATTTCTTCTCTTATTTTCTC 58.700 33.333 0.00 0.00 0.00 2.87
142 143 8.518702 GTTGGCATTTCTTCTCTTATTTTCTCT 58.481 33.333 0.00 0.00 0.00 3.10
143 144 8.641498 TGGCATTTCTTCTCTTATTTTCTCTT 57.359 30.769 0.00 0.00 0.00 2.85
144 145 8.517878 TGGCATTTCTTCTCTTATTTTCTCTTG 58.482 33.333 0.00 0.00 0.00 3.02
145 146 8.518702 GGCATTTCTTCTCTTATTTTCTCTTGT 58.481 33.333 0.00 0.00 0.00 3.16
146 147 9.905171 GCATTTCTTCTCTTATTTTCTCTTGTT 57.095 29.630 0.00 0.00 0.00 2.83
159 160 8.607441 ATTTTCTCTTGTTATTTCTTTTGGGC 57.393 30.769 0.00 0.00 0.00 5.36
160 161 5.371115 TCTCTTGTTATTTCTTTTGGGCG 57.629 39.130 0.00 0.00 0.00 6.13
161 162 4.825085 TCTCTTGTTATTTCTTTTGGGCGT 59.175 37.500 0.00 0.00 0.00 5.68
162 163 4.865776 TCTTGTTATTTCTTTTGGGCGTG 58.134 39.130 0.00 0.00 0.00 5.34
163 164 3.019933 TGTTATTTCTTTTGGGCGTGC 57.980 42.857 0.00 0.00 0.00 5.34
164 165 2.625790 TGTTATTTCTTTTGGGCGTGCT 59.374 40.909 0.00 0.00 0.00 4.40
165 166 3.068873 TGTTATTTCTTTTGGGCGTGCTT 59.931 39.130 0.00 0.00 0.00 3.91
166 167 2.153366 ATTTCTTTTGGGCGTGCTTG 57.847 45.000 0.00 0.00 0.00 4.01
167 168 0.820871 TTTCTTTTGGGCGTGCTTGT 59.179 45.000 0.00 0.00 0.00 3.16
168 169 0.102120 TTCTTTTGGGCGTGCTTGTG 59.898 50.000 0.00 0.00 0.00 3.33
169 170 1.034838 TCTTTTGGGCGTGCTTGTGT 61.035 50.000 0.00 0.00 0.00 3.72
170 171 0.179113 CTTTTGGGCGTGCTTGTGTT 60.179 50.000 0.00 0.00 0.00 3.32
171 172 0.459237 TTTTGGGCGTGCTTGTGTTG 60.459 50.000 0.00 0.00 0.00 3.33
172 173 1.599606 TTTGGGCGTGCTTGTGTTGT 61.600 50.000 0.00 0.00 0.00 3.32
173 174 1.599606 TTGGGCGTGCTTGTGTTGTT 61.600 50.000 0.00 0.00 0.00 2.83
174 175 1.140804 GGGCGTGCTTGTGTTGTTT 59.859 52.632 0.00 0.00 0.00 2.83
175 176 1.145162 GGGCGTGCTTGTGTTGTTTG 61.145 55.000 0.00 0.00 0.00 2.93
176 177 1.630549 GCGTGCTTGTGTTGTTTGC 59.369 52.632 0.00 0.00 0.00 3.68
177 178 1.751536 GCGTGCTTGTGTTGTTTGCC 61.752 55.000 0.00 0.00 0.00 4.52
178 179 1.145162 CGTGCTTGTGTTGTTTGCCC 61.145 55.000 0.00 0.00 0.00 5.36
179 180 0.809636 GTGCTTGTGTTGTTTGCCCC 60.810 55.000 0.00 0.00 0.00 5.80
180 181 1.260538 TGCTTGTGTTGTTTGCCCCA 61.261 50.000 0.00 0.00 0.00 4.96
181 182 0.530431 GCTTGTGTTGTTTGCCCCAG 60.530 55.000 0.00 0.00 0.00 4.45
182 183 0.530431 CTTGTGTTGTTTGCCCCAGC 60.530 55.000 0.00 0.00 40.48 4.85
183 184 2.027460 GTGTTGTTTGCCCCAGCG 59.973 61.111 0.00 0.00 44.31 5.18
184 185 2.441164 TGTTGTTTGCCCCAGCGT 60.441 55.556 0.00 0.00 44.31 5.07
185 186 2.055042 TGTTGTTTGCCCCAGCGTT 61.055 52.632 0.00 0.00 44.31 4.84
186 187 1.142965 GTTGTTTGCCCCAGCGTTT 59.857 52.632 0.00 0.00 44.31 3.60
187 188 0.386113 GTTGTTTGCCCCAGCGTTTA 59.614 50.000 0.00 0.00 44.31 2.01
188 189 1.000394 GTTGTTTGCCCCAGCGTTTAT 60.000 47.619 0.00 0.00 44.31 1.40
189 190 0.885196 TGTTTGCCCCAGCGTTTATC 59.115 50.000 0.00 0.00 44.31 1.75
190 191 0.179174 GTTTGCCCCAGCGTTTATCG 60.179 55.000 0.00 0.00 44.31 2.92
191 192 1.309499 TTTGCCCCAGCGTTTATCGG 61.309 55.000 0.00 0.00 44.31 4.18
192 193 2.186602 TTGCCCCAGCGTTTATCGGA 62.187 55.000 0.00 0.00 44.31 4.55
193 194 1.227853 GCCCCAGCGTTTATCGGAT 60.228 57.895 0.00 0.00 40.26 4.18
194 195 0.818040 GCCCCAGCGTTTATCGGATT 60.818 55.000 0.00 0.00 40.26 3.01
195 196 0.944386 CCCCAGCGTTTATCGGATTG 59.056 55.000 0.00 0.00 40.26 2.67
196 197 1.663695 CCCAGCGTTTATCGGATTGT 58.336 50.000 0.00 0.00 40.26 2.71
197 198 2.014128 CCCAGCGTTTATCGGATTGTT 58.986 47.619 0.00 0.00 40.26 2.83
198 199 2.223249 CCCAGCGTTTATCGGATTGTTG 60.223 50.000 0.00 0.00 40.26 3.33
199 200 2.418628 CCAGCGTTTATCGGATTGTTGT 59.581 45.455 0.00 0.00 40.26 3.32
200 201 3.619483 CCAGCGTTTATCGGATTGTTGTA 59.381 43.478 0.00 0.00 40.26 2.41
201 202 4.272504 CCAGCGTTTATCGGATTGTTGTAT 59.727 41.667 0.00 0.00 40.26 2.29
202 203 5.432157 CAGCGTTTATCGGATTGTTGTATC 58.568 41.667 0.00 0.00 40.26 2.24
203 204 4.208460 AGCGTTTATCGGATTGTTGTATCG 59.792 41.667 0.00 0.00 40.26 2.92
204 205 4.607557 GCGTTTATCGGATTGTTGTATCGG 60.608 45.833 0.00 0.00 40.26 4.18
205 206 4.084745 CGTTTATCGGATTGTTGTATCGGG 60.085 45.833 0.00 0.00 35.71 5.14
206 207 4.675976 TTATCGGATTGTTGTATCGGGT 57.324 40.909 0.00 0.00 0.00 5.28
207 208 2.303163 TCGGATTGTTGTATCGGGTG 57.697 50.000 0.00 0.00 0.00 4.61
208 209 1.134640 TCGGATTGTTGTATCGGGTGG 60.135 52.381 0.00 0.00 0.00 4.61
209 210 1.406341 CGGATTGTTGTATCGGGTGGT 60.406 52.381 0.00 0.00 0.00 4.16
210 211 2.718563 GGATTGTTGTATCGGGTGGTT 58.281 47.619 0.00 0.00 0.00 3.67
211 212 2.422127 GGATTGTTGTATCGGGTGGTTG 59.578 50.000 0.00 0.00 0.00 3.77
212 213 1.240256 TTGTTGTATCGGGTGGTTGC 58.760 50.000 0.00 0.00 0.00 4.17
213 214 0.398696 TGTTGTATCGGGTGGTTGCT 59.601 50.000 0.00 0.00 0.00 3.91
214 215 1.624312 TGTTGTATCGGGTGGTTGCTA 59.376 47.619 0.00 0.00 0.00 3.49
215 216 2.237643 TGTTGTATCGGGTGGTTGCTAT 59.762 45.455 0.00 0.00 0.00 2.97
216 217 3.451540 TGTTGTATCGGGTGGTTGCTATA 59.548 43.478 0.00 0.00 0.00 1.31
217 218 4.101898 TGTTGTATCGGGTGGTTGCTATAT 59.898 41.667 0.00 0.00 0.00 0.86
218 219 4.530710 TGTATCGGGTGGTTGCTATATC 57.469 45.455 0.00 0.00 0.00 1.63
219 220 3.898741 TGTATCGGGTGGTTGCTATATCA 59.101 43.478 0.00 0.00 0.00 2.15
220 221 4.345547 TGTATCGGGTGGTTGCTATATCAA 59.654 41.667 0.00 0.00 0.00 2.57
221 222 4.640771 ATCGGGTGGTTGCTATATCAAT 57.359 40.909 0.00 0.00 0.00 2.57
222 223 5.755409 ATCGGGTGGTTGCTATATCAATA 57.245 39.130 0.00 0.00 0.00 1.90
223 224 5.755409 TCGGGTGGTTGCTATATCAATAT 57.245 39.130 0.00 0.00 0.00 1.28
224 225 6.860790 TCGGGTGGTTGCTATATCAATATA 57.139 37.500 0.00 0.00 0.00 0.86
225 226 6.873997 TCGGGTGGTTGCTATATCAATATAG 58.126 40.000 11.20 11.20 43.16 1.31
233 234 4.585955 CTATATCAATATAGCGGGGCGT 57.414 45.455 4.53 0.00 36.77 5.68
234 235 5.700722 CTATATCAATATAGCGGGGCGTA 57.299 43.478 4.53 0.00 36.77 4.42
235 236 6.080648 CTATATCAATATAGCGGGGCGTAA 57.919 41.667 4.53 0.00 36.77 3.18
236 237 2.736144 TCAATATAGCGGGGCGTAAG 57.264 50.000 0.00 0.00 43.44 2.34
254 255 5.581605 CGTAAGCCTATTTCGGTACTTACA 58.418 41.667 10.32 0.00 39.45 2.41
287 288 4.701956 AATAAAGACGGCTGATGTTTGG 57.298 40.909 0.00 0.00 0.00 3.28
301 302 7.335924 GGCTGATGTTTGGTACTCAATAAGTAA 59.664 37.037 0.00 0.00 42.11 2.24
376 382 2.361757 CACACACCAAAGGCTCATTTCA 59.638 45.455 0.00 0.00 0.00 2.69
379 385 3.030291 ACACCAAAGGCTCATTTCAACA 58.970 40.909 0.00 0.00 0.00 3.33
461 467 9.692325 AGAATAGGGATAAAATATTGATCCAGC 57.308 33.333 22.35 11.85 40.90 4.85
466 472 6.267471 GGGATAAAATATTGATCCAGCAACCA 59.733 38.462 22.35 0.00 40.90 3.67
523 529 1.152819 CCATAGCATGCCAGCACCT 60.153 57.895 15.66 0.00 36.85 4.00
543 549 1.123655 GCGCACAAAGCTTCAGTTTC 58.876 50.000 0.30 0.00 42.61 2.78
626 632 5.557136 GCATTACACGCTCACAGCTAAATAG 60.557 44.000 0.00 0.00 39.60 1.73
696 718 0.546122 TTCACCACACTGCTGGTTCT 59.454 50.000 0.00 0.00 42.29 3.01
704 726 1.288127 CTGCTGGTTCTTTGCTGCC 59.712 57.895 0.00 0.00 0.00 4.85
727 749 6.017109 GCCGATTGTTGGAACATGATAATAGT 60.017 38.462 0.00 0.00 39.30 2.12
865 905 5.171476 CGTGATTCTTCATGTCTACCAGTT 58.829 41.667 0.00 0.00 34.69 3.16
886 932 5.186021 AGTTGACTGCTACTGCTTATACACT 59.814 40.000 0.00 0.00 40.48 3.55
942 2264 7.227910 GGTAACATCAAACCAGAAGTTGTTCTA 59.772 37.037 0.00 0.00 41.40 2.10
957 2279 7.023171 AGTTGTTCTACTCTTCTCCTCTCTA 57.977 40.000 0.00 0.00 0.00 2.43
972 2294 4.456222 TCCTCTCTACTCTCTTTCACAACG 59.544 45.833 0.00 0.00 0.00 4.10
1143 4484 0.463620 GTGATGGTCTGAGGAGGCTC 59.536 60.000 5.78 5.78 0.00 4.70
1173 4514 6.596888 ACATCTACAATGGTGTTGAAGAGATG 59.403 38.462 18.77 18.77 41.75 2.90
1188 4529 5.045651 TGAAGAGATGATTTGCCTACCAAGA 60.046 40.000 0.00 0.00 34.34 3.02
1204 4545 3.117663 ACCAAGAAACCAAGTTAGCTCCA 60.118 43.478 0.00 0.00 0.00 3.86
1374 4715 5.633139 TGCTCAAGCCAAGATCCAATCTTAT 60.633 40.000 2.06 0.00 43.25 1.73
1375 4716 7.633363 TGCTCAAGCCAAGATCCAATCTTATG 61.633 42.308 2.06 0.00 43.25 1.90
1414 4755 4.465305 AGGCCAAGAATCATTTCAAGAAGG 59.535 41.667 5.01 0.00 34.08 3.46
1472 4813 1.748591 GCTATTGACCAAGGCCAGAGG 60.749 57.143 5.01 5.98 0.00 3.69
1519 4860 3.057245 CACACTCCATCTCTTGTCGAAGA 60.057 47.826 0.00 0.00 36.72 2.87
1564 4905 3.069443 TCTTGTTTCCAAGGCATTTCACC 59.931 43.478 2.88 0.00 46.65 4.02
1669 6988 5.825593 TCTGTTCAGGAAATTAGTCCAGT 57.174 39.130 0.00 0.00 40.48 4.00
1701 7020 6.125327 TCTCTACTCAACATTCTTAGCTCG 57.875 41.667 0.00 0.00 0.00 5.03
1779 7100 7.709613 GGAATAGCTGATCTTCATGCAATTTTT 59.290 33.333 0.00 0.00 0.00 1.94
1819 7144 9.477484 CTATACAGTATCAATGTACAGGAAACC 57.523 37.037 0.33 0.00 36.04 3.27
1851 7182 7.436933 AGAGAAACCAAAGTTTTGATCCATTC 58.563 34.615 6.18 3.91 46.25 2.67
1881 7212 5.112220 TCATGCTTGAAGATGTGTTTGTC 57.888 39.130 0.00 0.00 0.00 3.18
1891 7222 4.579869 AGATGTGTTTGTCATCCCAGTAC 58.420 43.478 0.00 0.00 41.56 2.73
1933 7265 7.119846 CCTTGGTTAGTCAATCTTGTTCCTTAG 59.880 40.741 0.00 0.00 0.00 2.18
1956 7369 2.219080 TGAAGCATGCCAGATTTCCA 57.781 45.000 15.66 0.00 0.00 3.53
2022 7441 5.204409 TCTTGCTTCAGAATGCAACAAAT 57.796 34.783 13.07 0.00 43.17 2.32
2078 7498 9.586150 CGTTAACATCTGTATCATTAAAGCATC 57.414 33.333 6.39 0.00 0.00 3.91
2081 7501 7.649370 ACATCTGTATCATTAAAGCATCGAG 57.351 36.000 0.00 0.00 0.00 4.04
2110 7530 7.722795 AAAAATTTAGCACAAACATGTACCC 57.277 32.000 0.00 0.00 0.00 3.69
2164 7584 6.213195 AGGATTCACAATAATTTGGGCAAGAA 59.787 34.615 0.00 0.00 36.13 2.52
2184 7650 4.524328 AGAACTAATCCAAACTTTGCCAGG 59.476 41.667 0.00 0.00 0.00 4.45
2185 7651 4.112634 ACTAATCCAAACTTTGCCAGGA 57.887 40.909 0.00 0.00 0.00 3.86
2187 7653 1.247567 ATCCAAACTTTGCCAGGACG 58.752 50.000 0.00 0.00 0.00 4.79
2194 7660 3.431055 TTGCCAGGACGCAAAGTG 58.569 55.556 0.00 0.00 45.46 3.16
2196 7662 1.723608 TTGCCAGGACGCAAAGTGTG 61.724 55.000 0.00 0.00 45.46 3.82
2211 7677 5.762045 CAAAGTGTGTGTTCCTTTCCATAG 58.238 41.667 0.00 0.00 0.00 2.23
2287 7928 3.134442 AGATCTTCAGAATGGAGCAGGAC 59.866 47.826 0.00 0.00 43.21 3.85
2313 7954 6.666678 TCTGCTCAGGGAATTAATTCAGAAT 58.333 36.000 25.55 8.67 38.53 2.40
2314 7955 7.121382 TCTGCTCAGGGAATTAATTCAGAATT 58.879 34.615 25.55 13.06 38.53 2.17
2319 7960 8.284945 TCAGGGAATTAATTCAGAATTGAGTG 57.715 34.615 25.55 11.08 38.53 3.51
2321 7962 8.526147 CAGGGAATTAATTCAGAATTGAGTGTT 58.474 33.333 25.55 2.27 38.53 3.32
2322 7963 8.743714 AGGGAATTAATTCAGAATTGAGTGTTC 58.256 33.333 25.55 10.19 38.53 3.18
2323 7964 8.743714 GGGAATTAATTCAGAATTGAGTGTTCT 58.256 33.333 25.55 0.00 38.53 3.01
2324 7965 9.780413 GGAATTAATTCAGAATTGAGTGTTCTC 57.220 33.333 25.55 2.78 38.53 2.87
2327 7968 8.553459 TTAATTCAGAATTGAGTGTTCTCTCC 57.447 34.615 17.38 0.00 40.98 3.71
2328 7969 5.551305 TTCAGAATTGAGTGTTCTCTCCA 57.449 39.130 0.00 0.00 40.98 3.86
2329 7970 5.551305 TCAGAATTGAGTGTTCTCTCCAA 57.449 39.130 0.00 0.00 40.98 3.53
2330 7971 5.928976 TCAGAATTGAGTGTTCTCTCCAAA 58.071 37.500 0.00 0.00 40.98 3.28
2331 7972 6.356556 TCAGAATTGAGTGTTCTCTCCAAAA 58.643 36.000 0.00 0.00 40.98 2.44
2332 7973 6.484643 TCAGAATTGAGTGTTCTCTCCAAAAG 59.515 38.462 0.00 0.00 40.98 2.27
2333 7974 6.484643 CAGAATTGAGTGTTCTCTCCAAAAGA 59.515 38.462 0.00 0.00 40.98 2.52
2334 7975 7.012704 CAGAATTGAGTGTTCTCTCCAAAAGAA 59.987 37.037 0.00 0.00 40.98 2.52
2335 7976 7.557719 AGAATTGAGTGTTCTCTCCAAAAGAAA 59.442 33.333 0.00 0.00 40.98 2.52
2336 7977 7.645058 ATTGAGTGTTCTCTCCAAAAGAAAA 57.355 32.000 0.00 0.00 40.98 2.29
2337 7978 7.645058 TTGAGTGTTCTCTCCAAAAGAAAAT 57.355 32.000 0.00 0.00 40.98 1.82
2338 7979 7.645058 TGAGTGTTCTCTCCAAAAGAAAATT 57.355 32.000 0.00 0.00 40.98 1.82
2339 7980 7.707104 TGAGTGTTCTCTCCAAAAGAAAATTC 58.293 34.615 0.00 0.00 40.98 2.17
2340 7981 6.729187 AGTGTTCTCTCCAAAAGAAAATTCG 58.271 36.000 0.00 0.00 34.68 3.34
2341 7982 5.915196 GTGTTCTCTCCAAAAGAAAATTCGG 59.085 40.000 0.00 0.00 34.68 4.30
2342 7983 5.592688 TGTTCTCTCCAAAAGAAAATTCGGT 59.407 36.000 0.00 0.00 34.68 4.69
2343 7984 6.768861 TGTTCTCTCCAAAAGAAAATTCGGTA 59.231 34.615 0.00 0.00 34.68 4.02
2344 7985 7.447238 TGTTCTCTCCAAAAGAAAATTCGGTAT 59.553 33.333 0.00 0.00 34.68 2.73
2345 7986 8.943002 GTTCTCTCCAAAAGAAAATTCGGTATA 58.057 33.333 0.00 0.00 34.68 1.47
2346 7987 8.718102 TCTCTCCAAAAGAAAATTCGGTATAG 57.282 34.615 0.00 0.00 32.23 1.31
2347 7988 7.769044 TCTCTCCAAAAGAAAATTCGGTATAGG 59.231 37.037 0.00 0.00 32.23 2.57
2348 7989 7.399634 TCTCCAAAAGAAAATTCGGTATAGGT 58.600 34.615 0.00 0.00 0.00 3.08
2349 7990 7.335924 TCTCCAAAAGAAAATTCGGTATAGGTG 59.664 37.037 0.00 0.00 0.00 4.00
2350 7991 6.376018 TCCAAAAGAAAATTCGGTATAGGTGG 59.624 38.462 0.00 0.00 0.00 4.61
2351 7992 6.376018 CCAAAAGAAAATTCGGTATAGGTGGA 59.624 38.462 0.00 0.00 0.00 4.02
2352 7993 7.415206 CCAAAAGAAAATTCGGTATAGGTGGAG 60.415 40.741 0.00 0.00 0.00 3.86
2353 7994 6.555463 AAGAAAATTCGGTATAGGTGGAGA 57.445 37.500 0.00 0.00 0.00 3.71
2354 7995 6.163135 AGAAAATTCGGTATAGGTGGAGAG 57.837 41.667 0.00 0.00 0.00 3.20
2355 7996 4.957684 AAATTCGGTATAGGTGGAGAGG 57.042 45.455 0.00 0.00 0.00 3.69
2356 7997 1.700955 TTCGGTATAGGTGGAGAGGC 58.299 55.000 0.00 0.00 0.00 4.70
2357 7998 0.178970 TCGGTATAGGTGGAGAGGCC 60.179 60.000 0.00 0.00 37.10 5.19
2358 7999 1.186267 CGGTATAGGTGGAGAGGCCC 61.186 65.000 0.00 0.00 34.97 5.80
2359 8000 0.191314 GGTATAGGTGGAGAGGCCCT 59.809 60.000 0.00 0.00 34.97 5.19
2360 8001 1.634960 GTATAGGTGGAGAGGCCCTC 58.365 60.000 1.26 1.26 41.22 4.30
2361 8002 0.112606 TATAGGTGGAGAGGCCCTCG 59.887 60.000 4.80 0.00 42.89 4.63
2362 8003 3.897933 TATAGGTGGAGAGGCCCTCGC 62.898 61.905 5.85 5.85 42.89 5.03
2395 8036 3.217743 GACTCGGGGGCGACTAGG 61.218 72.222 0.00 0.00 0.00 3.02
2396 8037 4.835891 ACTCGGGGGCGACTAGGG 62.836 72.222 0.00 0.00 0.00 3.53
2397 8038 4.835891 CTCGGGGGCGACTAGGGT 62.836 72.222 0.00 0.00 0.00 4.34
2398 8039 4.387343 TCGGGGGCGACTAGGGTT 62.387 66.667 0.00 0.00 0.00 4.11
2399 8040 3.396570 CGGGGGCGACTAGGGTTT 61.397 66.667 0.00 0.00 0.00 3.27
2400 8041 2.271173 GGGGGCGACTAGGGTTTG 59.729 66.667 0.00 0.00 0.00 2.93
2401 8042 2.437895 GGGGCGACTAGGGTTTGC 60.438 66.667 0.00 0.00 0.00 3.68
2402 8043 2.437895 GGGCGACTAGGGTTTGCC 60.438 66.667 2.07 2.07 42.63 4.52
2403 8044 2.669240 GGCGACTAGGGTTTGCCT 59.331 61.111 3.33 0.00 41.21 4.75
2404 8045 1.449778 GGCGACTAGGGTTTGCCTC 60.450 63.158 3.33 0.00 41.21 4.70
2405 8046 1.449778 GCGACTAGGGTTTGCCTCC 60.450 63.158 0.00 0.00 34.45 4.30
2406 8047 1.900545 GCGACTAGGGTTTGCCTCCT 61.901 60.000 0.00 0.00 37.18 3.69
2407 8048 0.108138 CGACTAGGGTTTGCCTCCTG 60.108 60.000 0.00 0.00 34.75 3.86
2408 8049 0.393132 GACTAGGGTTTGCCTCCTGC 60.393 60.000 0.00 0.00 41.77 4.85
2409 8050 1.077429 CTAGGGTTTGCCTCCTGCC 60.077 63.158 0.00 0.00 40.16 4.85
2410 8051 2.876368 CTAGGGTTTGCCTCCTGCCG 62.876 65.000 0.00 0.00 40.16 5.69
2418 8059 4.785453 CCTCCTGCCGCCACCTTC 62.785 72.222 0.00 0.00 0.00 3.46
2419 8060 4.785453 CTCCTGCCGCCACCTTCC 62.785 72.222 0.00 0.00 0.00 3.46
2425 8066 4.506255 CCGCCACCTTCCCCATCC 62.506 72.222 0.00 0.00 0.00 3.51
2426 8067 3.727258 CGCCACCTTCCCCATCCA 61.727 66.667 0.00 0.00 0.00 3.41
2427 8068 2.043953 GCCACCTTCCCCATCCAC 60.044 66.667 0.00 0.00 0.00 4.02
2428 8069 2.683475 CCACCTTCCCCATCCACC 59.317 66.667 0.00 0.00 0.00 4.61
2429 8070 1.930656 CCACCTTCCCCATCCACCT 60.931 63.158 0.00 0.00 0.00 4.00
2430 8071 1.609783 CACCTTCCCCATCCACCTC 59.390 63.158 0.00 0.00 0.00 3.85
2431 8072 1.619669 ACCTTCCCCATCCACCTCC 60.620 63.158 0.00 0.00 0.00 4.30
2432 8073 2.386935 CCTTCCCCATCCACCTCCC 61.387 68.421 0.00 0.00 0.00 4.30
2433 8074 2.286885 TTCCCCATCCACCTCCCC 60.287 66.667 0.00 0.00 0.00 4.81
2434 8075 3.982196 TTCCCCATCCACCTCCCCC 62.982 68.421 0.00 0.00 0.00 5.40
2449 8090 4.619320 CCCCTTGCTGCCACCCAA 62.619 66.667 0.00 0.00 0.00 4.12
2450 8091 2.993264 CCCTTGCTGCCACCCAAG 60.993 66.667 0.00 0.00 38.48 3.61
2451 8092 2.115910 CCTTGCTGCCACCCAAGA 59.884 61.111 0.00 0.00 40.59 3.02
2452 8093 2.270986 CCTTGCTGCCACCCAAGAC 61.271 63.158 0.00 0.00 40.59 3.01
2453 8094 2.594303 TTGCTGCCACCCAAGACG 60.594 61.111 0.00 0.00 0.00 4.18
2454 8095 4.641645 TGCTGCCACCCAAGACGG 62.642 66.667 0.00 0.00 0.00 4.79
2501 8142 4.195334 GATGGTGGCGGCAGGGAT 62.195 66.667 13.91 4.21 0.00 3.85
2502 8143 4.195334 ATGGTGGCGGCAGGGATC 62.195 66.667 13.91 0.00 0.00 3.36
2504 8145 3.161450 GGTGGCGGCAGGGATCTA 61.161 66.667 13.91 0.00 0.00 1.98
2505 8146 2.423446 GTGGCGGCAGGGATCTAG 59.577 66.667 13.91 0.00 0.00 2.43
2506 8147 2.041922 TGGCGGCAGGGATCTAGT 60.042 61.111 7.97 0.00 0.00 2.57
2507 8148 2.134287 TGGCGGCAGGGATCTAGTC 61.134 63.158 7.97 0.00 0.00 2.59
2508 8149 2.336809 GCGGCAGGGATCTAGTCG 59.663 66.667 0.00 0.00 0.00 4.18
2509 8150 2.336809 CGGCAGGGATCTAGTCGC 59.663 66.667 0.00 0.00 39.92 5.19
2511 8152 1.663173 GGCAGGGATCTAGTCGCTC 59.337 63.158 8.32 5.34 46.15 5.03
2512 8153 0.825840 GGCAGGGATCTAGTCGCTCT 60.826 60.000 8.32 0.00 46.15 4.09
2513 8154 1.545875 GGCAGGGATCTAGTCGCTCTA 60.546 57.143 8.32 0.00 46.15 2.43
2514 8155 1.538075 GCAGGGATCTAGTCGCTCTAC 59.462 57.143 8.32 1.04 46.15 2.59
2515 8156 2.156098 CAGGGATCTAGTCGCTCTACC 58.844 57.143 8.32 0.00 46.15 3.18
2516 8157 1.074244 AGGGATCTAGTCGCTCTACCC 59.926 57.143 0.00 0.00 46.15 3.69
2517 8158 1.536940 GGATCTAGTCGCTCTACCCC 58.463 60.000 0.00 0.00 0.00 4.95
2518 8159 1.074244 GGATCTAGTCGCTCTACCCCT 59.926 57.143 0.00 0.00 0.00 4.79
2519 8160 2.489437 GGATCTAGTCGCTCTACCCCTT 60.489 54.545 0.00 0.00 0.00 3.95
2520 8161 2.054232 TCTAGTCGCTCTACCCCTTG 57.946 55.000 0.00 0.00 0.00 3.61
2521 8162 1.033574 CTAGTCGCTCTACCCCTTGG 58.966 60.000 0.00 0.00 37.80 3.61
2530 8171 1.657804 CTACCCCTTGGTGGAAGACT 58.342 55.000 0.00 0.00 45.60 3.24
2531 8172 1.279271 CTACCCCTTGGTGGAAGACTG 59.721 57.143 0.00 0.00 45.60 3.51
2532 8173 1.303643 CCCCTTGGTGGAAGACTGC 60.304 63.158 0.00 0.00 38.35 4.40
2533 8174 1.672356 CCCTTGGTGGAAGACTGCG 60.672 63.158 0.00 0.00 38.35 5.18
2534 8175 1.672356 CCTTGGTGGAAGACTGCGG 60.672 63.158 0.00 0.00 38.35 5.69
2535 8176 1.371183 CTTGGTGGAAGACTGCGGA 59.629 57.895 0.00 0.00 32.82 5.54
2536 8177 0.036010 CTTGGTGGAAGACTGCGGAT 60.036 55.000 0.00 0.00 32.82 4.18
2537 8178 0.036388 TTGGTGGAAGACTGCGGATC 60.036 55.000 0.00 0.00 0.00 3.36
2538 8179 1.153349 GGTGGAAGACTGCGGATCC 60.153 63.158 0.00 0.00 0.00 3.36
2539 8180 1.617947 GGTGGAAGACTGCGGATCCT 61.618 60.000 10.75 0.00 33.02 3.24
2540 8181 1.112113 GTGGAAGACTGCGGATCCTA 58.888 55.000 10.75 0.00 33.02 2.94
2541 8182 1.067821 GTGGAAGACTGCGGATCCTAG 59.932 57.143 10.75 10.55 33.02 3.02
2542 8183 0.676736 GGAAGACTGCGGATCCTAGG 59.323 60.000 10.75 0.82 0.00 3.02
2543 8184 0.032815 GAAGACTGCGGATCCTAGGC 59.967 60.000 10.75 10.34 0.00 3.93
2544 8185 1.739338 AAGACTGCGGATCCTAGGCG 61.739 60.000 10.75 3.08 0.00 5.52
2545 8186 3.850095 GACTGCGGATCCTAGGCGC 62.850 68.421 21.18 21.18 0.00 6.53
2562 8203 4.814294 CGCGCGGGAGGTAAAGCT 62.814 66.667 24.84 0.00 0.00 3.74
2563 8204 3.195698 GCGCGGGAGGTAAAGCTG 61.196 66.667 8.83 0.00 0.00 4.24
2564 8205 2.511600 CGCGGGAGGTAAAGCTGG 60.512 66.667 0.00 0.00 0.00 4.85
2565 8206 2.669240 GCGGGAGGTAAAGCTGGT 59.331 61.111 0.00 0.00 0.00 4.00
2566 8207 1.449778 GCGGGAGGTAAAGCTGGTC 60.450 63.158 0.00 0.00 0.00 4.02
2567 8208 1.153628 CGGGAGGTAAAGCTGGTCG 60.154 63.158 0.00 0.00 0.00 4.79
2568 8209 1.221021 GGGAGGTAAAGCTGGTCGG 59.779 63.158 0.00 0.00 0.00 4.79
2569 8210 1.262640 GGGAGGTAAAGCTGGTCGGA 61.263 60.000 0.00 0.00 0.00 4.55
2570 8211 0.175989 GGAGGTAAAGCTGGTCGGAG 59.824 60.000 0.00 0.00 0.00 4.63
2571 8212 0.175989 GAGGTAAAGCTGGTCGGAGG 59.824 60.000 0.00 0.00 0.00 4.30
2572 8213 1.449778 GGTAAAGCTGGTCGGAGGC 60.450 63.158 0.00 0.00 0.00 4.70
2573 8214 1.597461 GTAAAGCTGGTCGGAGGCT 59.403 57.895 0.00 0.00 37.99 4.58
2574 8215 0.036294 GTAAAGCTGGTCGGAGGCTT 60.036 55.000 6.88 6.88 46.44 4.35
2575 8216 0.036388 TAAAGCTGGTCGGAGGCTTG 60.036 55.000 11.64 0.00 44.17 4.01
2576 8217 2.754664 AAAGCTGGTCGGAGGCTTGG 62.755 60.000 11.64 0.00 44.17 3.61
2619 8260 4.980805 GGAGTTGGTCGCCACGCA 62.981 66.667 0.00 0.00 36.03 5.24
2620 8261 3.414700 GAGTTGGTCGCCACGCAG 61.415 66.667 0.00 0.00 30.78 5.18
2634 8275 2.815647 GCAGTGCTACCCTGCGTC 60.816 66.667 8.18 0.00 45.10 5.19
2635 8276 2.656646 CAGTGCTACCCTGCGTCA 59.343 61.111 0.00 0.00 35.36 4.35
2636 8277 1.446792 CAGTGCTACCCTGCGTCAG 60.447 63.158 0.52 0.52 35.36 3.51
2637 8278 1.606601 AGTGCTACCCTGCGTCAGA 60.607 57.895 8.20 0.00 32.44 3.27
2638 8279 0.972983 AGTGCTACCCTGCGTCAGAT 60.973 55.000 8.20 0.21 32.44 2.90
2639 8280 0.528684 GTGCTACCCTGCGTCAGATC 60.529 60.000 8.20 0.00 32.44 2.75
2640 8281 0.684479 TGCTACCCTGCGTCAGATCT 60.684 55.000 8.20 0.00 32.44 2.75
2641 8282 0.249238 GCTACCCTGCGTCAGATCTG 60.249 60.000 17.07 17.07 32.44 2.90
2642 8283 0.387202 CTACCCTGCGTCAGATCTGG 59.613 60.000 22.42 8.67 32.44 3.86
2643 8284 0.033503 TACCCTGCGTCAGATCTGGA 60.034 55.000 22.42 6.81 32.44 3.86
2644 8285 1.326213 ACCCTGCGTCAGATCTGGAG 61.326 60.000 22.42 16.63 32.44 3.86
2645 8286 1.440893 CCTGCGTCAGATCTGGAGG 59.559 63.158 22.42 17.01 32.44 4.30
2646 8287 1.326213 CCTGCGTCAGATCTGGAGGT 61.326 60.000 22.42 0.00 32.44 3.85
2647 8288 0.534412 CTGCGTCAGATCTGGAGGTT 59.466 55.000 22.42 0.00 32.44 3.50
2648 8289 0.532573 TGCGTCAGATCTGGAGGTTC 59.467 55.000 22.42 7.04 0.00 3.62
2649 8290 0.532573 GCGTCAGATCTGGAGGTTCA 59.467 55.000 22.42 0.00 0.00 3.18
2650 8291 1.066858 GCGTCAGATCTGGAGGTTCAA 60.067 52.381 22.42 0.00 0.00 2.69
2651 8292 2.886081 CGTCAGATCTGGAGGTTCAAG 58.114 52.381 22.42 0.06 0.00 3.02
2652 8293 2.626840 GTCAGATCTGGAGGTTCAAGC 58.373 52.381 22.42 0.00 0.00 4.01
2653 8294 2.235898 GTCAGATCTGGAGGTTCAAGCT 59.764 50.000 22.42 0.00 0.00 3.74
2654 8295 2.499289 TCAGATCTGGAGGTTCAAGCTC 59.501 50.000 22.42 8.17 41.73 4.09
2661 8302 0.539518 GAGGTTCAAGCTCCTCTCCC 59.460 60.000 5.19 0.00 44.68 4.30
2662 8303 0.912006 AGGTTCAAGCTCCTCTCCCC 60.912 60.000 0.00 0.00 0.00 4.81
2663 8304 0.912006 GGTTCAAGCTCCTCTCCCCT 60.912 60.000 0.00 0.00 0.00 4.79
2664 8305 0.251634 GTTCAAGCTCCTCTCCCCTG 59.748 60.000 0.00 0.00 0.00 4.45
2665 8306 1.557269 TTCAAGCTCCTCTCCCCTGC 61.557 60.000 0.00 0.00 0.00 4.85
2666 8307 2.690510 AAGCTCCTCTCCCCTGCC 60.691 66.667 0.00 0.00 0.00 4.85
2667 8308 4.814041 AGCTCCTCTCCCCTGCCC 62.814 72.222 0.00 0.00 0.00 5.36
2668 8309 4.814041 GCTCCTCTCCCCTGCCCT 62.814 72.222 0.00 0.00 0.00 5.19
2669 8310 2.445654 CTCCTCTCCCCTGCCCTC 60.446 72.222 0.00 0.00 0.00 4.30
2670 8311 2.955246 TCCTCTCCCCTGCCCTCT 60.955 66.667 0.00 0.00 0.00 3.69
2671 8312 2.445654 CCTCTCCCCTGCCCTCTC 60.446 72.222 0.00 0.00 0.00 3.20
2672 8313 2.695597 CTCTCCCCTGCCCTCTCT 59.304 66.667 0.00 0.00 0.00 3.10
2673 8314 1.457455 CTCTCCCCTGCCCTCTCTC 60.457 68.421 0.00 0.00 0.00 3.20
2674 8315 1.938596 TCTCCCCTGCCCTCTCTCT 60.939 63.158 0.00 0.00 0.00 3.10
2675 8316 1.457455 CTCCCCTGCCCTCTCTCTC 60.457 68.421 0.00 0.00 0.00 3.20
2676 8317 2.445654 CCCCTGCCCTCTCTCTCC 60.446 72.222 0.00 0.00 0.00 3.71
2677 8318 2.445654 CCCTGCCCTCTCTCTCCC 60.446 72.222 0.00 0.00 0.00 4.30
2678 8319 2.695597 CCTGCCCTCTCTCTCCCT 59.304 66.667 0.00 0.00 0.00 4.20
2679 8320 1.457455 CCTGCCCTCTCTCTCCCTC 60.457 68.421 0.00 0.00 0.00 4.30
2680 8321 1.620259 CTGCCCTCTCTCTCCCTCT 59.380 63.158 0.00 0.00 0.00 3.69
2681 8322 0.756442 CTGCCCTCTCTCTCCCTCTG 60.756 65.000 0.00 0.00 0.00 3.35
2682 8323 1.457455 GCCCTCTCTCTCCCTCTGG 60.457 68.421 0.00 0.00 0.00 3.86
2683 8324 1.457455 CCCTCTCTCTCCCTCTGGC 60.457 68.421 0.00 0.00 0.00 4.85
2684 8325 1.457455 CCTCTCTCTCCCTCTGGCC 60.457 68.421 0.00 0.00 0.00 5.36
2685 8326 1.620259 CTCTCTCTCCCTCTGGCCT 59.380 63.158 3.32 0.00 0.00 5.19
2686 8327 0.468029 CTCTCTCTCCCTCTGGCCTC 60.468 65.000 3.32 0.00 0.00 4.70
2687 8328 1.827789 CTCTCTCCCTCTGGCCTCG 60.828 68.421 3.32 0.00 0.00 4.63
2688 8329 2.837291 CTCTCCCTCTGGCCTCGG 60.837 72.222 3.32 0.84 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.550914 ACCAAGCACCACCTTCAAGA 59.449 50.000 0.00 0.00 0.00 3.02
7 8 1.880027 GTACCAAGCACCACCTTCAAG 59.120 52.381 0.00 0.00 0.00 3.02
9 10 0.840617 TGTACCAAGCACCACCTTCA 59.159 50.000 0.00 0.00 0.00 3.02
10 11 1.235724 GTGTACCAAGCACCACCTTC 58.764 55.000 0.00 0.00 0.00 3.46
11 12 0.534203 CGTGTACCAAGCACCACCTT 60.534 55.000 0.00 0.00 33.61 3.50
12 13 1.070786 CGTGTACCAAGCACCACCT 59.929 57.895 0.00 0.00 33.61 4.00
13 14 1.964373 CCGTGTACCAAGCACCACC 60.964 63.158 0.00 0.00 33.61 4.61
14 15 2.613506 GCCGTGTACCAAGCACCAC 61.614 63.158 0.00 0.00 33.61 4.16
15 16 2.281208 GCCGTGTACCAAGCACCA 60.281 61.111 0.00 0.00 33.61 4.17
17 18 1.164041 AGTTGCCGTGTACCAAGCAC 61.164 55.000 0.74 0.00 34.37 4.40
18 19 0.882927 GAGTTGCCGTGTACCAAGCA 60.883 55.000 0.00 0.00 0.00 3.91
19 20 1.866925 GAGTTGCCGTGTACCAAGC 59.133 57.895 0.00 0.00 0.00 4.01
20 21 1.289109 CCGAGTTGCCGTGTACCAAG 61.289 60.000 0.00 0.00 0.00 3.61
21 22 1.301087 CCGAGTTGCCGTGTACCAA 60.301 57.895 0.00 0.00 0.00 3.67
24 25 2.025418 CCACCGAGTTGCCGTGTAC 61.025 63.158 0.00 0.00 0.00 2.90
27 28 4.988598 AGCCACCGAGTTGCCGTG 62.989 66.667 0.00 0.00 0.00 4.94
28 29 3.767630 AAAGCCACCGAGTTGCCGT 62.768 57.895 0.00 0.00 0.00 5.68
30 31 2.644992 CAAAGCCACCGAGTTGCC 59.355 61.111 0.00 0.00 0.00 4.52
31 32 1.856265 CTCCAAAGCCACCGAGTTGC 61.856 60.000 0.00 0.00 0.00 4.17
32 33 1.856265 GCTCCAAAGCCACCGAGTTG 61.856 60.000 0.00 0.00 43.10 3.16
33 34 1.600916 GCTCCAAAGCCACCGAGTT 60.601 57.895 0.00 0.00 43.10 3.01
34 35 2.032681 GCTCCAAAGCCACCGAGT 59.967 61.111 0.00 0.00 43.10 4.18
35 36 3.121030 CGCTCCAAAGCCACCGAG 61.121 66.667 0.00 0.00 46.34 4.63
36 37 3.936203 ACGCTCCAAAGCCACCGA 61.936 61.111 0.00 0.00 46.34 4.69
37 38 3.726517 CACGCTCCAAAGCCACCG 61.727 66.667 0.00 0.00 46.34 4.94
40 41 2.594303 CACCACGCTCCAAAGCCA 60.594 61.111 0.00 0.00 46.34 4.75
41 42 3.365265 CCACCACGCTCCAAAGCC 61.365 66.667 0.00 0.00 46.34 4.35
43 44 1.737793 GATAACCACCACGCTCCAAAG 59.262 52.381 0.00 0.00 0.00 2.77
45 46 0.981183 AGATAACCACCACGCTCCAA 59.019 50.000 0.00 0.00 0.00 3.53
47 48 1.737793 CAAAGATAACCACCACGCTCC 59.262 52.381 0.00 0.00 0.00 4.70
48 49 1.737793 CCAAAGATAACCACCACGCTC 59.262 52.381 0.00 0.00 0.00 5.03
51 52 1.810151 CCACCAAAGATAACCACCACG 59.190 52.381 0.00 0.00 0.00 4.94
52 53 2.167662 CCCACCAAAGATAACCACCAC 58.832 52.381 0.00 0.00 0.00 4.16
53 54 1.549037 GCCCACCAAAGATAACCACCA 60.549 52.381 0.00 0.00 0.00 4.17
54 55 1.182667 GCCCACCAAAGATAACCACC 58.817 55.000 0.00 0.00 0.00 4.61
55 56 0.808755 CGCCCACCAAAGATAACCAC 59.191 55.000 0.00 0.00 0.00 4.16
56 57 0.963355 GCGCCCACCAAAGATAACCA 60.963 55.000 0.00 0.00 0.00 3.67
57 58 0.963355 TGCGCCCACCAAAGATAACC 60.963 55.000 4.18 0.00 0.00 2.85
58 59 0.451783 CTGCGCCCACCAAAGATAAC 59.548 55.000 4.18 0.00 0.00 1.89
59 60 1.312371 GCTGCGCCCACCAAAGATAA 61.312 55.000 4.18 0.00 0.00 1.75
60 61 1.748879 GCTGCGCCCACCAAAGATA 60.749 57.895 4.18 0.00 0.00 1.98
61 62 3.064324 GCTGCGCCCACCAAAGAT 61.064 61.111 4.18 0.00 0.00 2.40
85 86 1.226030 AACGAAAGCTACGGCACACC 61.226 55.000 15.59 0.00 41.70 4.16
86 87 0.110823 CAACGAAAGCTACGGCACAC 60.111 55.000 15.59 0.00 41.70 3.82
87 88 0.249531 TCAACGAAAGCTACGGCACA 60.250 50.000 15.59 0.00 41.70 4.57
88 89 1.060698 GATCAACGAAAGCTACGGCAC 59.939 52.381 15.59 2.06 41.70 5.01
89 90 1.355971 GATCAACGAAAGCTACGGCA 58.644 50.000 15.59 2.12 41.70 5.69
90 91 0.651031 GGATCAACGAAAGCTACGGC 59.349 55.000 15.59 0.00 39.06 5.68
91 92 0.921347 CGGATCAACGAAAGCTACGG 59.079 55.000 15.59 0.00 35.47 4.02
92 93 1.582502 GTCGGATCAACGAAAGCTACG 59.417 52.381 10.86 10.86 45.38 3.51
93 94 1.582502 CGTCGGATCAACGAAAGCTAC 59.417 52.381 12.97 0.00 45.38 3.58
94 95 1.200716 ACGTCGGATCAACGAAAGCTA 59.799 47.619 22.06 0.00 45.38 3.32
95 96 0.038526 ACGTCGGATCAACGAAAGCT 60.039 50.000 22.06 1.57 45.38 3.74
96 97 0.788391 AACGTCGGATCAACGAAAGC 59.212 50.000 22.06 0.02 45.38 3.51
97 98 1.790623 ACAACGTCGGATCAACGAAAG 59.209 47.619 22.06 14.32 45.38 2.62
98 99 1.855513 ACAACGTCGGATCAACGAAA 58.144 45.000 22.06 0.00 45.38 3.46
99 100 1.523515 CAACAACGTCGGATCAACGAA 59.476 47.619 22.06 0.00 45.38 3.85
100 101 1.133407 CAACAACGTCGGATCAACGA 58.867 50.000 22.06 8.24 42.62 3.85
101 102 0.162933 CCAACAACGTCGGATCAACG 59.837 55.000 15.78 15.78 45.37 4.10
102 103 0.110373 GCCAACAACGTCGGATCAAC 60.110 55.000 0.00 0.00 0.00 3.18
103 104 0.533085 TGCCAACAACGTCGGATCAA 60.533 50.000 0.00 0.00 0.00 2.57
104 105 0.321210 ATGCCAACAACGTCGGATCA 60.321 50.000 0.00 0.00 0.00 2.92
105 106 0.802494 AATGCCAACAACGTCGGATC 59.198 50.000 0.00 0.00 0.00 3.36
106 107 1.199097 GAAATGCCAACAACGTCGGAT 59.801 47.619 0.00 0.00 0.00 4.18
107 108 0.589223 GAAATGCCAACAACGTCGGA 59.411 50.000 0.00 0.00 0.00 4.55
108 109 0.591170 AGAAATGCCAACAACGTCGG 59.409 50.000 0.00 0.00 0.00 4.79
109 110 2.032030 AGAAGAAATGCCAACAACGTCG 60.032 45.455 0.00 0.00 0.00 5.12
110 111 3.251004 AGAGAAGAAATGCCAACAACGTC 59.749 43.478 0.00 0.00 0.00 4.34
111 112 3.214328 AGAGAAGAAATGCCAACAACGT 58.786 40.909 0.00 0.00 0.00 3.99
112 113 3.904136 AGAGAAGAAATGCCAACAACG 57.096 42.857 0.00 0.00 0.00 4.10
113 114 8.593492 AAAATAAGAGAAGAAATGCCAACAAC 57.407 30.769 0.00 0.00 0.00 3.32
114 115 8.641541 AGAAAATAAGAGAAGAAATGCCAACAA 58.358 29.630 0.00 0.00 0.00 2.83
115 116 8.181904 AGAAAATAAGAGAAGAAATGCCAACA 57.818 30.769 0.00 0.00 0.00 3.33
116 117 8.518702 AGAGAAAATAAGAGAAGAAATGCCAAC 58.481 33.333 0.00 0.00 0.00 3.77
117 118 8.641498 AGAGAAAATAAGAGAAGAAATGCCAA 57.359 30.769 0.00 0.00 0.00 4.52
118 119 8.517878 CAAGAGAAAATAAGAGAAGAAATGCCA 58.482 33.333 0.00 0.00 0.00 4.92
119 120 8.518702 ACAAGAGAAAATAAGAGAAGAAATGCC 58.481 33.333 0.00 0.00 0.00 4.40
120 121 9.905171 AACAAGAGAAAATAAGAGAAGAAATGC 57.095 29.630 0.00 0.00 0.00 3.56
133 134 9.705290 GCCCAAAAGAAATAACAAGAGAAAATA 57.295 29.630 0.00 0.00 0.00 1.40
134 135 7.384932 CGCCCAAAAGAAATAACAAGAGAAAAT 59.615 33.333 0.00 0.00 0.00 1.82
135 136 6.699642 CGCCCAAAAGAAATAACAAGAGAAAA 59.300 34.615 0.00 0.00 0.00 2.29
136 137 6.183360 ACGCCCAAAAGAAATAACAAGAGAAA 60.183 34.615 0.00 0.00 0.00 2.52
137 138 5.300792 ACGCCCAAAAGAAATAACAAGAGAA 59.699 36.000 0.00 0.00 0.00 2.87
138 139 4.825085 ACGCCCAAAAGAAATAACAAGAGA 59.175 37.500 0.00 0.00 0.00 3.10
139 140 4.917415 CACGCCCAAAAGAAATAACAAGAG 59.083 41.667 0.00 0.00 0.00 2.85
140 141 4.794655 GCACGCCCAAAAGAAATAACAAGA 60.795 41.667 0.00 0.00 0.00 3.02
141 142 3.428534 GCACGCCCAAAAGAAATAACAAG 59.571 43.478 0.00 0.00 0.00 3.16
142 143 3.068873 AGCACGCCCAAAAGAAATAACAA 59.931 39.130 0.00 0.00 0.00 2.83
143 144 2.625790 AGCACGCCCAAAAGAAATAACA 59.374 40.909 0.00 0.00 0.00 2.41
144 145 3.297830 AGCACGCCCAAAAGAAATAAC 57.702 42.857 0.00 0.00 0.00 1.89
145 146 3.068873 ACAAGCACGCCCAAAAGAAATAA 59.931 39.130 0.00 0.00 0.00 1.40
146 147 2.625790 ACAAGCACGCCCAAAAGAAATA 59.374 40.909 0.00 0.00 0.00 1.40
147 148 1.412343 ACAAGCACGCCCAAAAGAAAT 59.588 42.857 0.00 0.00 0.00 2.17
148 149 0.820871 ACAAGCACGCCCAAAAGAAA 59.179 45.000 0.00 0.00 0.00 2.52
149 150 0.102120 CACAAGCACGCCCAAAAGAA 59.898 50.000 0.00 0.00 0.00 2.52
150 151 1.034838 ACACAAGCACGCCCAAAAGA 61.035 50.000 0.00 0.00 0.00 2.52
151 152 0.179113 AACACAAGCACGCCCAAAAG 60.179 50.000 0.00 0.00 0.00 2.27
152 153 0.459237 CAACACAAGCACGCCCAAAA 60.459 50.000 0.00 0.00 0.00 2.44
153 154 1.140589 CAACACAAGCACGCCCAAA 59.859 52.632 0.00 0.00 0.00 3.28
154 155 1.599606 AACAACACAAGCACGCCCAA 61.600 50.000 0.00 0.00 0.00 4.12
155 156 1.599606 AAACAACACAAGCACGCCCA 61.600 50.000 0.00 0.00 0.00 5.36
156 157 1.140804 AAACAACACAAGCACGCCC 59.859 52.632 0.00 0.00 0.00 6.13
157 158 1.751536 GCAAACAACACAAGCACGCC 61.752 55.000 0.00 0.00 0.00 5.68
158 159 1.630549 GCAAACAACACAAGCACGC 59.369 52.632 0.00 0.00 0.00 5.34
159 160 1.145162 GGGCAAACAACACAAGCACG 61.145 55.000 0.00 0.00 0.00 5.34
160 161 0.809636 GGGGCAAACAACACAAGCAC 60.810 55.000 0.00 0.00 0.00 4.40
161 162 1.260538 TGGGGCAAACAACACAAGCA 61.261 50.000 0.00 0.00 0.00 3.91
162 163 0.530431 CTGGGGCAAACAACACAAGC 60.530 55.000 0.00 0.00 0.00 4.01
163 164 0.530431 GCTGGGGCAAACAACACAAG 60.530 55.000 0.00 0.00 38.54 3.16
164 165 1.519719 GCTGGGGCAAACAACACAA 59.480 52.632 0.00 0.00 38.54 3.33
165 166 2.780094 CGCTGGGGCAAACAACACA 61.780 57.895 0.00 0.00 38.60 3.72
166 167 2.027460 CGCTGGGGCAAACAACAC 59.973 61.111 0.00 0.00 38.60 3.32
167 168 1.608717 AAACGCTGGGGCAAACAACA 61.609 50.000 0.00 0.00 38.60 3.33
168 169 0.386113 TAAACGCTGGGGCAAACAAC 59.614 50.000 0.00 0.00 38.60 3.32
169 170 1.271102 GATAAACGCTGGGGCAAACAA 59.729 47.619 0.00 0.00 38.60 2.83
170 171 0.885196 GATAAACGCTGGGGCAAACA 59.115 50.000 0.00 0.00 38.60 2.83
171 172 0.179174 CGATAAACGCTGGGGCAAAC 60.179 55.000 0.00 0.00 38.60 2.93
172 173 1.309499 CCGATAAACGCTGGGGCAAA 61.309 55.000 0.00 0.00 41.07 3.68
173 174 1.747367 CCGATAAACGCTGGGGCAA 60.747 57.895 0.00 0.00 41.07 4.52
174 175 1.978455 ATCCGATAAACGCTGGGGCA 61.978 55.000 0.00 0.00 41.07 5.36
175 176 0.818040 AATCCGATAAACGCTGGGGC 60.818 55.000 0.00 0.00 41.07 5.80
176 177 0.944386 CAATCCGATAAACGCTGGGG 59.056 55.000 0.00 0.00 41.07 4.96
177 178 1.663695 ACAATCCGATAAACGCTGGG 58.336 50.000 0.00 0.00 41.07 4.45
178 179 2.418628 ACAACAATCCGATAAACGCTGG 59.581 45.455 0.00 0.00 41.07 4.85
179 180 3.740044 ACAACAATCCGATAAACGCTG 57.260 42.857 0.00 0.00 41.07 5.18
180 181 4.208460 CGATACAACAATCCGATAAACGCT 59.792 41.667 0.00 0.00 41.07 5.07
181 182 4.442705 CGATACAACAATCCGATAAACGC 58.557 43.478 0.00 0.00 41.07 4.84
182 183 4.084745 CCCGATACAACAATCCGATAAACG 60.085 45.833 0.00 0.00 42.18 3.60
183 184 4.812626 ACCCGATACAACAATCCGATAAAC 59.187 41.667 0.00 0.00 0.00 2.01
184 185 4.812091 CACCCGATACAACAATCCGATAAA 59.188 41.667 0.00 0.00 0.00 1.40
185 186 4.373527 CACCCGATACAACAATCCGATAA 58.626 43.478 0.00 0.00 0.00 1.75
186 187 3.243941 CCACCCGATACAACAATCCGATA 60.244 47.826 0.00 0.00 0.00 2.92
187 188 2.484770 CCACCCGATACAACAATCCGAT 60.485 50.000 0.00 0.00 0.00 4.18
188 189 1.134640 CCACCCGATACAACAATCCGA 60.135 52.381 0.00 0.00 0.00 4.55
189 190 1.295792 CCACCCGATACAACAATCCG 58.704 55.000 0.00 0.00 0.00 4.18
190 191 2.413310 ACCACCCGATACAACAATCC 57.587 50.000 0.00 0.00 0.00 3.01
191 192 2.159435 GCAACCACCCGATACAACAATC 60.159 50.000 0.00 0.00 0.00 2.67
192 193 1.816224 GCAACCACCCGATACAACAAT 59.184 47.619 0.00 0.00 0.00 2.71
193 194 1.202830 AGCAACCACCCGATACAACAA 60.203 47.619 0.00 0.00 0.00 2.83
194 195 0.398696 AGCAACCACCCGATACAACA 59.601 50.000 0.00 0.00 0.00 3.33
195 196 2.389962 TAGCAACCACCCGATACAAC 57.610 50.000 0.00 0.00 0.00 3.32
196 197 4.345547 TGATATAGCAACCACCCGATACAA 59.654 41.667 0.00 0.00 0.00 2.41
197 198 3.898741 TGATATAGCAACCACCCGATACA 59.101 43.478 0.00 0.00 0.00 2.29
198 199 4.530710 TGATATAGCAACCACCCGATAC 57.469 45.455 0.00 0.00 0.00 2.24
199 200 5.755409 ATTGATATAGCAACCACCCGATA 57.245 39.130 5.38 0.00 0.00 2.92
200 201 4.640771 ATTGATATAGCAACCACCCGAT 57.359 40.909 5.38 0.00 0.00 4.18
201 202 5.755409 ATATTGATATAGCAACCACCCGA 57.245 39.130 5.38 0.00 0.00 5.14
212 213 4.585955 ACGCCCCGCTATATTGATATAG 57.414 45.455 11.86 11.86 43.16 1.31
213 214 5.508489 GCTTACGCCCCGCTATATTGATATA 60.508 44.000 0.00 0.00 0.00 0.86
214 215 4.739735 GCTTACGCCCCGCTATATTGATAT 60.740 45.833 0.00 0.00 0.00 1.63
215 216 3.429822 GCTTACGCCCCGCTATATTGATA 60.430 47.826 0.00 0.00 0.00 2.15
216 217 2.677037 GCTTACGCCCCGCTATATTGAT 60.677 50.000 0.00 0.00 0.00 2.57
217 218 1.337447 GCTTACGCCCCGCTATATTGA 60.337 52.381 0.00 0.00 0.00 2.57
218 219 1.076332 GCTTACGCCCCGCTATATTG 58.924 55.000 0.00 0.00 0.00 1.90
219 220 3.527434 GCTTACGCCCCGCTATATT 57.473 52.632 0.00 0.00 0.00 1.28
230 231 3.089573 AGTACCGAAATAGGCTTACGC 57.910 47.619 0.00 0.00 33.69 4.42
231 232 5.581605 TGTAAGTACCGAAATAGGCTTACG 58.418 41.667 0.00 0.00 38.53 3.18
232 233 7.832503 TTTGTAAGTACCGAAATAGGCTTAC 57.167 36.000 0.00 0.00 37.36 2.34
233 234 9.101655 GAATTTGTAAGTACCGAAATAGGCTTA 57.898 33.333 0.00 0.00 33.69 3.09
234 235 7.608761 TGAATTTGTAAGTACCGAAATAGGCTT 59.391 33.333 0.00 0.00 33.69 4.35
235 236 7.107542 TGAATTTGTAAGTACCGAAATAGGCT 58.892 34.615 0.00 0.00 33.69 4.58
236 237 7.279313 TCTGAATTTGTAAGTACCGAAATAGGC 59.721 37.037 0.00 0.00 33.69 3.93
237 238 8.712285 TCTGAATTTGTAAGTACCGAAATAGG 57.288 34.615 0.00 0.00 37.30 2.57
301 302 6.548321 TCACACAACCTTTACCCATTATTCT 58.452 36.000 0.00 0.00 0.00 2.40
340 341 2.106511 GTGTGTGCCCCTGGACATATAT 59.893 50.000 0.00 0.00 0.00 0.86
376 382 8.373981 TGACCATTTCATATCAAACCATTTGTT 58.626 29.630 1.50 0.00 41.36 2.83
379 385 7.496591 GCATGACCATTTCATATCAAACCATTT 59.503 33.333 0.00 0.00 43.68 2.32
460 466 0.685458 AAGGATCATGGGCTGGTTGC 60.685 55.000 0.00 0.00 41.94 4.17
461 467 1.108776 CAAGGATCATGGGCTGGTTG 58.891 55.000 0.00 0.00 0.00 3.77
466 472 1.637553 ACTTGACAAGGATCATGGGCT 59.362 47.619 19.16 0.00 0.00 5.19
492 498 4.580167 GCATGCTATGGTGATAGGAAACAA 59.420 41.667 11.37 0.00 36.23 2.83
498 504 2.708051 CTGGCATGCTATGGTGATAGG 58.292 52.381 18.92 0.00 33.29 2.57
523 529 5.859860 CAGAAACTGAAGCTTTGTGCGCA 62.860 47.826 5.66 5.66 39.30 6.09
530 536 6.488006 TCTTGCTAATCAGAAACTGAAGCTTT 59.512 34.615 19.24 8.11 44.04 3.51
543 549 4.326826 TGGTGGAAACTCTTGCTAATCAG 58.673 43.478 0.00 0.00 0.00 2.90
654 660 1.195442 TGGCGGTGGATCTTGGTACA 61.195 55.000 0.00 0.00 0.00 2.90
655 661 0.462047 CTGGCGGTGGATCTTGGTAC 60.462 60.000 0.00 0.00 0.00 3.34
696 718 1.035923 TTCCAACAATCGGCAGCAAA 58.964 45.000 0.00 0.00 0.00 3.68
704 726 9.261180 ACTACTATTATCATGTTCCAACAATCG 57.739 33.333 0.00 0.00 43.03 3.34
746 786 7.879070 AGTCGTCTCATGTTTAGTACAAGTAA 58.121 34.615 0.00 0.00 40.89 2.24
747 787 7.444629 AGTCGTCTCATGTTTAGTACAAGTA 57.555 36.000 0.00 0.00 40.89 2.24
748 788 6.328641 AGTCGTCTCATGTTTAGTACAAGT 57.671 37.500 0.00 0.00 40.89 3.16
749 789 7.502339 CAAAGTCGTCTCATGTTTAGTACAAG 58.498 38.462 0.00 0.00 40.89 3.16
750 790 6.073980 GCAAAGTCGTCTCATGTTTAGTACAA 60.074 38.462 0.00 0.00 40.89 2.41
865 905 5.419155 AGAAGTGTATAAGCAGTAGCAGTCA 59.581 40.000 0.00 0.00 45.49 3.41
886 932 7.411486 GCAGAGGCCTATATATACAGAAGAA 57.589 40.000 4.42 0.00 0.00 2.52
911 957 5.181245 ACTTCTGGTTTGATGTTACCATTCG 59.819 40.000 0.00 0.00 43.15 3.34
942 2264 6.012858 TGAAAGAGAGTAGAGAGGAGAAGAGT 60.013 42.308 0.00 0.00 0.00 3.24
957 2279 7.392494 TCTATGTATCGTTGTGAAAGAGAGT 57.608 36.000 0.00 0.00 0.00 3.24
972 2294 8.147058 TCTGATCTGGAAGCTTTTCTATGTATC 58.853 37.037 0.00 0.00 0.00 2.24
1143 4484 3.526931 ACACCATTGTAGATGTCTCCG 57.473 47.619 0.00 0.00 32.60 4.63
1173 4514 4.280929 ACTTGGTTTCTTGGTAGGCAAATC 59.719 41.667 0.00 0.00 0.00 2.17
1188 4529 3.744660 CTGAGTGGAGCTAACTTGGTTT 58.255 45.455 3.20 0.00 0.00 3.27
1204 4545 2.027377 CCAACATCTTCCTCTGCTGAGT 60.027 50.000 18.11 0.00 38.61 3.41
1472 4813 2.174639 TCCAGGAGAGAGACAGAGATCC 59.825 54.545 0.00 0.00 0.00 3.36
1519 4860 7.955918 AGAGACTGTTTAGGCATTTCAATTTT 58.044 30.769 0.00 0.00 32.87 1.82
1587 4928 0.394080 GCTCCTGCAATTGCTCCTCT 60.394 55.000 29.37 0.00 42.66 3.69
1669 6988 4.937201 TGTTGAGTAGAGAAACTCTGCA 57.063 40.909 16.33 7.74 43.84 4.41
1804 7129 7.824289 TCTCTTTCTATGGTTTCCTGTACATTG 59.176 37.037 0.00 0.00 0.00 2.82
1819 7144 9.971922 ATCAAAACTTTGGTTTCTCTTTCTATG 57.028 29.630 2.49 0.00 43.90 2.23
1952 7284 1.650242 ATGTGGTGGTGGTGGTGGAA 61.650 55.000 0.00 0.00 0.00 3.53
1953 7285 2.081787 ATGTGGTGGTGGTGGTGGA 61.082 57.895 0.00 0.00 0.00 4.02
1954 7286 1.902918 CATGTGGTGGTGGTGGTGG 60.903 63.158 0.00 0.00 0.00 4.61
1956 7369 2.520458 CCATGTGGTGGTGGTGGT 59.480 61.111 0.00 0.00 43.44 4.16
2091 7511 3.823873 CCAGGGTACATGTTTGTGCTAAA 59.176 43.478 2.30 0.00 38.40 1.85
2092 7512 3.073209 TCCAGGGTACATGTTTGTGCTAA 59.927 43.478 2.30 0.00 38.40 3.09
2109 7529 1.673665 GCAGAGTTGTGGCTCCAGG 60.674 63.158 0.00 0.00 36.20 4.45
2110 7530 0.250640 AAGCAGAGTTGTGGCTCCAG 60.251 55.000 0.00 0.00 36.76 3.86
2145 7565 7.492344 GGATTAGTTCTTGCCCAAATTATTGTG 59.508 37.037 0.00 0.00 34.60 3.33
2164 7584 3.826729 GTCCTGGCAAAGTTTGGATTAGT 59.173 43.478 17.11 0.00 0.00 2.24
2184 7650 1.014352 AGGAACACACACTTTGCGTC 58.986 50.000 0.00 0.00 0.00 5.19
2185 7651 1.459450 AAGGAACACACACTTTGCGT 58.541 45.000 0.00 0.00 0.00 5.24
2187 7653 2.165437 TGGAAAGGAACACACACTTTGC 59.835 45.455 0.00 0.00 41.19 3.68
2192 7658 5.767816 AAACTATGGAAAGGAACACACAC 57.232 39.130 0.00 0.00 0.00 3.82
2193 7659 9.173021 CATATAAACTATGGAAAGGAACACACA 57.827 33.333 0.00 0.00 0.00 3.72
2194 7660 8.129211 GCATATAAACTATGGAAAGGAACACAC 58.871 37.037 0.00 0.00 0.00 3.82
2196 7662 8.451908 AGCATATAAACTATGGAAAGGAACAC 57.548 34.615 0.00 0.00 0.00 3.32
2211 7677 7.424803 TGATGTGTGCCAATAAGCATATAAAC 58.575 34.615 0.00 0.00 46.24 2.01
2263 7904 3.494749 CCTGCTCCATTCTGAAGATCTCC 60.495 52.174 0.00 0.00 0.00 3.71
2287 7928 6.060136 TCTGAATTAATTCCCTGAGCAGATG 58.940 40.000 22.42 2.48 35.97 2.90
2293 7934 8.404000 CACTCAATTCTGAATTAATTCCCTGAG 58.596 37.037 22.42 23.10 35.97 3.35
2313 7954 7.645058 ATTTTCTTTTGGAGAGAACACTCAA 57.355 32.000 0.00 0.00 38.51 3.02
2314 7955 7.467267 CGAATTTTCTTTTGGAGAGAACACTCA 60.467 37.037 0.00 0.00 38.51 3.41
2319 7960 6.073327 ACCGAATTTTCTTTTGGAGAGAAC 57.927 37.500 0.00 0.00 35.37 3.01
2321 7962 7.769044 CCTATACCGAATTTTCTTTTGGAGAGA 59.231 37.037 0.00 0.00 35.37 3.10
2322 7963 7.553044 ACCTATACCGAATTTTCTTTTGGAGAG 59.447 37.037 0.00 0.00 35.37 3.20
2323 7964 7.335924 CACCTATACCGAATTTTCTTTTGGAGA 59.664 37.037 0.00 0.00 34.66 3.71
2324 7965 7.415206 CCACCTATACCGAATTTTCTTTTGGAG 60.415 40.741 0.00 0.00 34.66 3.86
2325 7966 6.376018 CCACCTATACCGAATTTTCTTTTGGA 59.624 38.462 0.00 0.00 34.66 3.53
2326 7967 6.376018 TCCACCTATACCGAATTTTCTTTTGG 59.624 38.462 0.00 0.00 36.38 3.28
2327 7968 7.335924 TCTCCACCTATACCGAATTTTCTTTTG 59.664 37.037 0.00 0.00 0.00 2.44
2328 7969 7.399634 TCTCCACCTATACCGAATTTTCTTTT 58.600 34.615 0.00 0.00 0.00 2.27
2329 7970 6.954232 TCTCCACCTATACCGAATTTTCTTT 58.046 36.000 0.00 0.00 0.00 2.52
2330 7971 6.408206 CCTCTCCACCTATACCGAATTTTCTT 60.408 42.308 0.00 0.00 0.00 2.52
2331 7972 5.070580 CCTCTCCACCTATACCGAATTTTCT 59.929 44.000 0.00 0.00 0.00 2.52
2332 7973 5.298347 CCTCTCCACCTATACCGAATTTTC 58.702 45.833 0.00 0.00 0.00 2.29
2333 7974 4.444449 GCCTCTCCACCTATACCGAATTTT 60.444 45.833 0.00 0.00 0.00 1.82
2334 7975 3.071167 GCCTCTCCACCTATACCGAATTT 59.929 47.826 0.00 0.00 0.00 1.82
2335 7976 2.633481 GCCTCTCCACCTATACCGAATT 59.367 50.000 0.00 0.00 0.00 2.17
2336 7977 2.249139 GCCTCTCCACCTATACCGAAT 58.751 52.381 0.00 0.00 0.00 3.34
2337 7978 1.700955 GCCTCTCCACCTATACCGAA 58.299 55.000 0.00 0.00 0.00 4.30
2338 7979 0.178970 GGCCTCTCCACCTATACCGA 60.179 60.000 0.00 0.00 34.01 4.69
2339 7980 1.186267 GGGCCTCTCCACCTATACCG 61.186 65.000 0.84 0.00 36.21 4.02
2340 7981 0.191314 AGGGCCTCTCCACCTATACC 59.809 60.000 0.00 0.00 36.21 2.73
2341 7982 1.634960 GAGGGCCTCTCCACCTATAC 58.365 60.000 26.44 0.00 36.52 1.47
2342 7983 0.112606 CGAGGGCCTCTCCACCTATA 59.887 60.000 29.81 0.00 39.30 1.31
2343 7984 1.152440 CGAGGGCCTCTCCACCTAT 60.152 63.158 29.81 0.00 39.30 2.57
2344 7985 2.279073 CGAGGGCCTCTCCACCTA 59.721 66.667 29.81 0.00 39.30 3.08
2377 8018 3.584052 CTAGTCGCCCCCGAGTCG 61.584 72.222 5.29 5.29 43.27 4.18
2378 8019 3.217743 CCTAGTCGCCCCCGAGTC 61.218 72.222 0.00 0.00 43.27 3.36
2380 8021 4.835891 ACCCTAGTCGCCCCCGAG 62.836 72.222 0.00 0.00 45.38 4.63
2381 8022 3.910784 AAACCCTAGTCGCCCCCGA 62.911 63.158 0.00 0.00 42.01 5.14
2382 8023 3.396570 AAACCCTAGTCGCCCCCG 61.397 66.667 0.00 0.00 0.00 5.73
2383 8024 2.271173 CAAACCCTAGTCGCCCCC 59.729 66.667 0.00 0.00 0.00 5.40
2384 8025 2.437895 GCAAACCCTAGTCGCCCC 60.438 66.667 0.00 0.00 0.00 5.80
2385 8026 2.437895 GGCAAACCCTAGTCGCCC 60.438 66.667 0.00 0.00 36.73 6.13
2386 8027 1.449778 GAGGCAAACCCTAGTCGCC 60.450 63.158 0.00 0.00 46.60 5.54
2387 8028 1.449778 GGAGGCAAACCCTAGTCGC 60.450 63.158 0.00 0.00 46.60 5.19
2388 8029 0.108138 CAGGAGGCAAACCCTAGTCG 60.108 60.000 0.00 0.00 46.60 4.18
2389 8030 0.393132 GCAGGAGGCAAACCCTAGTC 60.393 60.000 0.00 0.00 46.60 2.59
2390 8031 1.685820 GCAGGAGGCAAACCCTAGT 59.314 57.895 0.00 0.00 46.60 2.57
2391 8032 1.077429 GGCAGGAGGCAAACCCTAG 60.077 63.158 0.00 0.00 46.60 3.02
2392 8033 2.966732 CGGCAGGAGGCAAACCCTA 61.967 63.158 0.00 0.00 46.60 3.53
2401 8042 4.785453 GAAGGTGGCGGCAGGAGG 62.785 72.222 13.91 0.00 0.00 4.30
2402 8043 4.785453 GGAAGGTGGCGGCAGGAG 62.785 72.222 13.91 0.00 0.00 3.69
2408 8049 4.506255 GGATGGGGAAGGTGGCGG 62.506 72.222 0.00 0.00 0.00 6.13
2409 8050 3.727258 TGGATGGGGAAGGTGGCG 61.727 66.667 0.00 0.00 0.00 5.69
2410 8051 2.043953 GTGGATGGGGAAGGTGGC 60.044 66.667 0.00 0.00 0.00 5.01
2411 8052 1.926426 GAGGTGGATGGGGAAGGTGG 61.926 65.000 0.00 0.00 0.00 4.61
2412 8053 1.609783 GAGGTGGATGGGGAAGGTG 59.390 63.158 0.00 0.00 0.00 4.00
2413 8054 1.619669 GGAGGTGGATGGGGAAGGT 60.620 63.158 0.00 0.00 0.00 3.50
2414 8055 2.386935 GGGAGGTGGATGGGGAAGG 61.387 68.421 0.00 0.00 0.00 3.46
2415 8056 2.386935 GGGGAGGTGGATGGGGAAG 61.387 68.421 0.00 0.00 0.00 3.46
2416 8057 2.286885 GGGGAGGTGGATGGGGAA 60.287 66.667 0.00 0.00 0.00 3.97
2417 8058 4.448340 GGGGGAGGTGGATGGGGA 62.448 72.222 0.00 0.00 0.00 4.81
2432 8073 4.619320 TTGGGTGGCAGCAAGGGG 62.619 66.667 19.48 0.00 0.00 4.79
2433 8074 2.993264 CTTGGGTGGCAGCAAGGG 60.993 66.667 19.48 0.35 0.00 3.95
2434 8075 2.115910 TCTTGGGTGGCAGCAAGG 59.884 61.111 19.48 8.07 0.00 3.61
2435 8076 2.620112 CGTCTTGGGTGGCAGCAAG 61.620 63.158 19.48 18.07 0.00 4.01
2436 8077 2.594303 CGTCTTGGGTGGCAGCAA 60.594 61.111 19.48 3.78 0.00 3.91
2437 8078 4.641645 CCGTCTTGGGTGGCAGCA 62.642 66.667 19.48 1.74 0.00 4.41
2447 8088 3.851845 TTGTCCGACGGCCGTCTTG 62.852 63.158 44.83 36.42 42.54 3.02
2448 8089 3.569049 CTTGTCCGACGGCCGTCTT 62.569 63.158 44.83 21.65 42.54 3.01
2449 8090 4.052229 CTTGTCCGACGGCCGTCT 62.052 66.667 44.83 22.45 42.54 4.18
2484 8125 4.195334 ATCCCTGCCGCCACCATC 62.195 66.667 0.00 0.00 0.00 3.51
2485 8126 4.195334 GATCCCTGCCGCCACCAT 62.195 66.667 0.00 0.00 0.00 3.55
2486 8127 3.993865 TAGATCCCTGCCGCCACCA 62.994 63.158 0.00 0.00 0.00 4.17
2487 8128 3.161450 TAGATCCCTGCCGCCACC 61.161 66.667 0.00 0.00 0.00 4.61
2488 8129 2.370647 GACTAGATCCCTGCCGCCAC 62.371 65.000 0.00 0.00 0.00 5.01
2489 8130 2.041922 ACTAGATCCCTGCCGCCA 60.042 61.111 0.00 0.00 0.00 5.69
2490 8131 2.737830 GACTAGATCCCTGCCGCC 59.262 66.667 0.00 0.00 0.00 6.13
2491 8132 2.336809 CGACTAGATCCCTGCCGC 59.663 66.667 0.00 0.00 0.00 6.53
2492 8133 2.136196 GAGCGACTAGATCCCTGCCG 62.136 65.000 0.00 0.00 0.00 5.69
2493 8134 0.825840 AGAGCGACTAGATCCCTGCC 60.826 60.000 0.00 0.00 35.47 4.85
2494 8135 1.538075 GTAGAGCGACTAGATCCCTGC 59.462 57.143 0.00 0.00 35.47 4.85
2495 8136 2.156098 GGTAGAGCGACTAGATCCCTG 58.844 57.143 0.00 0.00 35.47 4.45
2496 8137 1.074244 GGGTAGAGCGACTAGATCCCT 59.926 57.143 0.00 0.00 35.47 4.20
2497 8138 1.536940 GGGTAGAGCGACTAGATCCC 58.463 60.000 0.00 0.00 35.47 3.85
2498 8139 1.074244 AGGGGTAGAGCGACTAGATCC 59.926 57.143 0.00 0.00 35.47 3.36
2499 8140 2.554893 CAAGGGGTAGAGCGACTAGATC 59.445 54.545 0.00 0.00 35.01 2.75
2500 8141 2.588620 CAAGGGGTAGAGCGACTAGAT 58.411 52.381 0.00 0.00 0.00 1.98
2501 8142 1.409802 CCAAGGGGTAGAGCGACTAGA 60.410 57.143 0.00 0.00 0.00 2.43
2502 8143 1.033574 CCAAGGGGTAGAGCGACTAG 58.966 60.000 0.00 0.00 0.00 2.57
2503 8144 3.202548 CCAAGGGGTAGAGCGACTA 57.797 57.895 0.00 0.00 0.00 2.59
2504 8145 4.035843 CCAAGGGGTAGAGCGACT 57.964 61.111 0.00 0.00 0.00 4.18
2514 8155 1.303643 GCAGTCTTCCACCAAGGGG 60.304 63.158 0.00 0.00 38.24 4.79
2515 8156 1.672356 CGCAGTCTTCCACCAAGGG 60.672 63.158 0.00 0.00 38.24 3.95
2516 8157 1.672356 CCGCAGTCTTCCACCAAGG 60.672 63.158 0.00 0.00 39.47 3.61
2517 8158 0.036010 ATCCGCAGTCTTCCACCAAG 60.036 55.000 0.00 0.00 0.00 3.61
2518 8159 0.036388 GATCCGCAGTCTTCCACCAA 60.036 55.000 0.00 0.00 0.00 3.67
2519 8160 1.596934 GATCCGCAGTCTTCCACCA 59.403 57.895 0.00 0.00 0.00 4.17
2520 8161 1.153349 GGATCCGCAGTCTTCCACC 60.153 63.158 0.00 0.00 0.00 4.61
2521 8162 1.067821 CTAGGATCCGCAGTCTTCCAC 59.932 57.143 5.98 0.00 0.00 4.02
2522 8163 1.403814 CTAGGATCCGCAGTCTTCCA 58.596 55.000 5.98 0.00 0.00 3.53
2523 8164 0.676736 CCTAGGATCCGCAGTCTTCC 59.323 60.000 1.05 0.00 0.00 3.46
2524 8165 0.032815 GCCTAGGATCCGCAGTCTTC 59.967 60.000 14.75 0.00 0.00 2.87
2525 8166 1.739338 CGCCTAGGATCCGCAGTCTT 61.739 60.000 14.75 0.00 0.00 3.01
2526 8167 2.196925 CGCCTAGGATCCGCAGTCT 61.197 63.158 14.75 0.00 0.00 3.24
2527 8168 2.336809 CGCCTAGGATCCGCAGTC 59.663 66.667 14.75 0.00 0.00 3.51
2528 8169 3.917760 GCGCCTAGGATCCGCAGT 61.918 66.667 22.51 0.00 46.32 4.40
2545 8186 4.814294 AGCTTTACCTCCCGCGCG 62.814 66.667 25.67 25.67 0.00 6.86
2546 8187 3.195698 CAGCTTTACCTCCCGCGC 61.196 66.667 0.00 0.00 0.00 6.86
2547 8188 2.511600 CCAGCTTTACCTCCCGCG 60.512 66.667 0.00 0.00 0.00 6.46
2548 8189 1.449778 GACCAGCTTTACCTCCCGC 60.450 63.158 0.00 0.00 0.00 6.13
2549 8190 1.153628 CGACCAGCTTTACCTCCCG 60.154 63.158 0.00 0.00 0.00 5.14
2550 8191 1.221021 CCGACCAGCTTTACCTCCC 59.779 63.158 0.00 0.00 0.00 4.30
2551 8192 0.175989 CTCCGACCAGCTTTACCTCC 59.824 60.000 0.00 0.00 0.00 4.30
2552 8193 0.175989 CCTCCGACCAGCTTTACCTC 59.824 60.000 0.00 0.00 0.00 3.85
2553 8194 1.900545 GCCTCCGACCAGCTTTACCT 61.901 60.000 0.00 0.00 0.00 3.08
2554 8195 1.449778 GCCTCCGACCAGCTTTACC 60.450 63.158 0.00 0.00 0.00 2.85
2555 8196 0.036294 AAGCCTCCGACCAGCTTTAC 60.036 55.000 0.00 0.00 44.17 2.01
2556 8197 0.036388 CAAGCCTCCGACCAGCTTTA 60.036 55.000 0.00 0.00 44.17 1.85
2557 8198 1.302832 CAAGCCTCCGACCAGCTTT 60.303 57.895 0.00 0.00 44.17 3.51
2559 8200 3.710722 CCAAGCCTCCGACCAGCT 61.711 66.667 0.00 0.00 38.88 4.24
2561 8202 4.785453 GGCCAAGCCTCCGACCAG 62.785 72.222 0.00 0.00 46.69 4.00
2602 8243 4.980805 TGCGTGGCGACCAACTCC 62.981 66.667 0.00 0.00 34.18 3.85
2603 8244 3.414700 CTGCGTGGCGACCAACTC 61.415 66.667 0.00 0.00 34.18 3.01
2604 8245 4.235762 ACTGCGTGGCGACCAACT 62.236 61.111 0.00 0.00 34.18 3.16
2605 8246 4.012895 CACTGCGTGGCGACCAAC 62.013 66.667 0.00 0.00 34.18 3.77
2608 8249 4.735132 TAGCACTGCGTGGCGACC 62.735 66.667 10.02 0.00 33.64 4.79
2609 8250 3.479269 GTAGCACTGCGTGGCGAC 61.479 66.667 10.02 0.00 33.64 5.19
2610 8251 4.735132 GGTAGCACTGCGTGGCGA 62.735 66.667 10.02 0.00 33.64 5.54
2612 8253 4.394712 AGGGTAGCACTGCGTGGC 62.395 66.667 10.02 0.00 33.64 5.01
2613 8254 2.434884 CAGGGTAGCACTGCGTGG 60.435 66.667 10.02 0.00 33.64 4.94
2618 8259 1.446792 CTGACGCAGGGTAGCACTG 60.447 63.158 6.17 6.17 38.95 3.66
2619 8260 0.972983 ATCTGACGCAGGGTAGCACT 60.973 55.000 6.95 0.00 31.51 4.40
2620 8261 0.528684 GATCTGACGCAGGGTAGCAC 60.529 60.000 6.95 0.00 31.51 4.40
2621 8262 0.684479 AGATCTGACGCAGGGTAGCA 60.684 55.000 0.00 0.00 31.51 3.49
2622 8263 0.249238 CAGATCTGACGCAGGGTAGC 60.249 60.000 18.34 0.00 31.51 3.58
2623 8264 0.387202 CCAGATCTGACGCAGGGTAG 59.613 60.000 24.62 0.00 31.51 3.18
2624 8265 0.033503 TCCAGATCTGACGCAGGGTA 60.034 55.000 24.62 0.00 31.51 3.69
2625 8266 1.305297 TCCAGATCTGACGCAGGGT 60.305 57.895 24.62 0.00 31.51 4.34
2626 8267 1.440893 CTCCAGATCTGACGCAGGG 59.559 63.158 24.62 5.44 31.51 4.45
2627 8268 1.326213 ACCTCCAGATCTGACGCAGG 61.326 60.000 24.62 21.84 31.51 4.85
2628 8269 0.534412 AACCTCCAGATCTGACGCAG 59.466 55.000 24.62 12.93 0.00 5.18
2629 8270 0.532573 GAACCTCCAGATCTGACGCA 59.467 55.000 24.62 4.06 0.00 5.24
2630 8271 0.532573 TGAACCTCCAGATCTGACGC 59.467 55.000 24.62 7.52 0.00 5.19
2631 8272 2.886081 CTTGAACCTCCAGATCTGACG 58.114 52.381 24.62 13.44 0.00 4.35
2632 8273 2.235898 AGCTTGAACCTCCAGATCTGAC 59.764 50.000 24.62 8.31 0.00 3.51
2633 8274 2.499289 GAGCTTGAACCTCCAGATCTGA 59.501 50.000 24.62 9.26 0.00 3.27
2634 8275 2.419851 GGAGCTTGAACCTCCAGATCTG 60.420 54.545 16.24 16.24 46.51 2.90
2635 8276 1.836802 GGAGCTTGAACCTCCAGATCT 59.163 52.381 1.68 0.00 46.51 2.75
2636 8277 2.323968 GGAGCTTGAACCTCCAGATC 57.676 55.000 1.68 0.00 46.51 2.75
2643 8284 0.912006 GGGGAGAGGAGCTTGAACCT 60.912 60.000 0.00 0.00 39.41 3.50
2644 8285 0.912006 AGGGGAGAGGAGCTTGAACC 60.912 60.000 0.00 0.00 0.00 3.62
2645 8286 0.251634 CAGGGGAGAGGAGCTTGAAC 59.748 60.000 0.00 0.00 0.00 3.18
2646 8287 1.557269 GCAGGGGAGAGGAGCTTGAA 61.557 60.000 0.00 0.00 0.00 2.69
2647 8288 1.992277 GCAGGGGAGAGGAGCTTGA 60.992 63.158 0.00 0.00 0.00 3.02
2648 8289 2.588989 GCAGGGGAGAGGAGCTTG 59.411 66.667 0.00 0.00 0.00 4.01
2649 8290 2.690510 GGCAGGGGAGAGGAGCTT 60.691 66.667 0.00 0.00 0.00 3.74
2650 8291 4.814041 GGGCAGGGGAGAGGAGCT 62.814 72.222 0.00 0.00 0.00 4.09
2651 8292 4.814041 AGGGCAGGGGAGAGGAGC 62.814 72.222 0.00 0.00 0.00 4.70
2652 8293 2.445654 GAGGGCAGGGGAGAGGAG 60.446 72.222 0.00 0.00 0.00 3.69
2653 8294 2.955246 AGAGGGCAGGGGAGAGGA 60.955 66.667 0.00 0.00 0.00 3.71
2654 8295 2.445654 GAGAGGGCAGGGGAGAGG 60.446 72.222 0.00 0.00 0.00 3.69
2655 8296 1.457455 GAGAGAGGGCAGGGGAGAG 60.457 68.421 0.00 0.00 0.00 3.20
2656 8297 1.938596 AGAGAGAGGGCAGGGGAGA 60.939 63.158 0.00 0.00 0.00 3.71
2657 8298 1.457455 GAGAGAGAGGGCAGGGGAG 60.457 68.421 0.00 0.00 0.00 4.30
2658 8299 2.693017 GAGAGAGAGGGCAGGGGA 59.307 66.667 0.00 0.00 0.00 4.81
2659 8300 2.445654 GGAGAGAGAGGGCAGGGG 60.446 72.222 0.00 0.00 0.00 4.79
2660 8301 2.445654 GGGAGAGAGAGGGCAGGG 60.446 72.222 0.00 0.00 0.00 4.45
2661 8302 1.457455 GAGGGAGAGAGAGGGCAGG 60.457 68.421 0.00 0.00 0.00 4.85
2662 8303 0.756442 CAGAGGGAGAGAGAGGGCAG 60.756 65.000 0.00 0.00 0.00 4.85
2663 8304 1.309347 CAGAGGGAGAGAGAGGGCA 59.691 63.158 0.00 0.00 0.00 5.36
2664 8305 1.457455 CCAGAGGGAGAGAGAGGGC 60.457 68.421 0.00 0.00 35.59 5.19
2665 8306 1.457455 GCCAGAGGGAGAGAGAGGG 60.457 68.421 0.00 0.00 35.59 4.30
2666 8307 1.457455 GGCCAGAGGGAGAGAGAGG 60.457 68.421 0.00 0.00 35.59 3.69
2667 8308 0.468029 GAGGCCAGAGGGAGAGAGAG 60.468 65.000 5.01 0.00 35.59 3.20
2668 8309 1.618030 GAGGCCAGAGGGAGAGAGA 59.382 63.158 5.01 0.00 35.59 3.10
2669 8310 1.827789 CGAGGCCAGAGGGAGAGAG 60.828 68.421 5.01 0.00 35.59 3.20
2670 8311 2.277072 CGAGGCCAGAGGGAGAGA 59.723 66.667 5.01 0.00 35.59 3.10
2671 8312 2.837291 CCGAGGCCAGAGGGAGAG 60.837 72.222 5.01 0.00 35.59 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.