Multiple sequence alignment - TraesCS7B01G171800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G171800 chr7B 100.000 3451 0 0 1 3451 244397405 244400855 0.000000e+00 6373.0
1 TraesCS7B01G171800 chr7B 99.232 2864 17 3 589 3451 312341953 312339094 0.000000e+00 5162.0
2 TraesCS7B01G171800 chr3A 99.267 2864 17 3 589 3451 639500582 639497722 0.000000e+00 5169.0
3 TraesCS7B01G171800 chr5A 99.129 2870 17 3 589 3451 506137832 506134964 0.000000e+00 5155.0
4 TraesCS7B01G171800 chr5A 98.883 2865 23 5 589 3451 593169434 593166577 0.000000e+00 5105.0
5 TraesCS7B01G171800 chr1B 99.162 2864 23 1 589 3451 359601538 359598675 0.000000e+00 5155.0
6 TraesCS7B01G171800 chr1B 99.092 2865 23 2 588 3451 641515777 641512915 0.000000e+00 5144.0
7 TraesCS7B01G171800 chr1B 98.987 2864 19 2 589 3451 400295118 400297972 0.000000e+00 5120.0
8 TraesCS7B01G171800 chr2A 99.127 2864 22 2 589 3451 84594387 84591526 0.000000e+00 5147.0
9 TraesCS7B01G171800 chr2A 94.737 209 2 1 589 797 84589509 84589310 2.000000e-82 316.0
10 TraesCS7B01G171800 chr1A 99.092 2864 25 1 589 3451 583541454 583538591 0.000000e+00 5144.0
11 TraesCS7B01G171800 chr7D 86.081 467 43 10 123 586 264032840 264033287 1.860000e-132 483.0
12 TraesCS7B01G171800 chr7D 87.918 389 35 6 1 379 264037846 264038232 6.790000e-122 448.0
13 TraesCS7B01G171800 chr7A 89.147 258 24 4 11 267 287487364 287487618 5.560000e-83 318.0
14 TraesCS7B01G171800 chr7A 81.383 376 38 12 215 588 287495662 287496007 9.430000e-71 278.0
15 TraesCS7B01G171800 chr7A 90.741 54 5 0 255 308 287488902 287488955 4.780000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G171800 chr7B 244397405 244400855 3450 False 6373.0 6373 100.000 1 3451 1 chr7B.!!$F1 3450
1 TraesCS7B01G171800 chr7B 312339094 312341953 2859 True 5162.0 5162 99.232 589 3451 1 chr7B.!!$R1 2862
2 TraesCS7B01G171800 chr3A 639497722 639500582 2860 True 5169.0 5169 99.267 589 3451 1 chr3A.!!$R1 2862
3 TraesCS7B01G171800 chr5A 506134964 506137832 2868 True 5155.0 5155 99.129 589 3451 1 chr5A.!!$R1 2862
4 TraesCS7B01G171800 chr5A 593166577 593169434 2857 True 5105.0 5105 98.883 589 3451 1 chr5A.!!$R2 2862
5 TraesCS7B01G171800 chr1B 359598675 359601538 2863 True 5155.0 5155 99.162 589 3451 1 chr1B.!!$R1 2862
6 TraesCS7B01G171800 chr1B 641512915 641515777 2862 True 5144.0 5144 99.092 588 3451 1 chr1B.!!$R2 2863
7 TraesCS7B01G171800 chr1B 400295118 400297972 2854 False 5120.0 5120 98.987 589 3451 1 chr1B.!!$F1 2862
8 TraesCS7B01G171800 chr2A 84589310 84594387 5077 True 2731.5 5147 96.932 589 3451 2 chr2A.!!$R1 2862
9 TraesCS7B01G171800 chr1A 583538591 583541454 2863 True 5144.0 5144 99.092 589 3451 1 chr1A.!!$R1 2862

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
554 555 0.103390 GAGGCCGAGAGTAAGAAGGC 59.897 60.0 0.00 0.0 46.51 4.35 F
557 558 0.249398 GCCGAGAGTAAGAAGGCCAA 59.751 55.0 5.01 0.0 41.81 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1911 1921 3.01020 GAACCCCTCGAGTTACCTCTA 57.99 52.381 12.31 0.0 35.43 2.43 R
2712 2723 4.01995 TGTCCACACATCAGAGTGAATCAT 60.02 41.667 0.57 0.0 42.05 2.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.381481 CATATCCATGCTAAAAGAACTGCA 57.619 37.500 0.00 0.00 39.83 4.41
24 25 4.708726 ATCCATGCTAAAAGAACTGCAC 57.291 40.909 0.00 0.00 38.29 4.57
25 26 2.819608 TCCATGCTAAAAGAACTGCACC 59.180 45.455 0.00 0.00 38.29 5.01
26 27 2.821969 CCATGCTAAAAGAACTGCACCT 59.178 45.455 0.00 0.00 38.29 4.00
27 28 4.009675 CCATGCTAAAAGAACTGCACCTA 58.990 43.478 0.00 0.00 38.29 3.08
28 29 4.095483 CCATGCTAAAAGAACTGCACCTAG 59.905 45.833 0.00 0.00 38.29 3.02
29 30 4.351874 TGCTAAAAGAACTGCACCTAGT 57.648 40.909 0.00 0.00 0.00 2.57
30 31 4.714632 TGCTAAAAGAACTGCACCTAGTT 58.285 39.130 0.00 0.00 43.24 2.24
31 32 4.515191 TGCTAAAAGAACTGCACCTAGTTG 59.485 41.667 0.00 0.00 40.78 3.16
32 33 3.990318 AAAAGAACTGCACCTAGTTGC 57.010 42.857 5.12 5.12 40.78 4.17
40 41 2.393271 GCACCTAGTTGCACAGATCT 57.607 50.000 7.48 0.00 42.49 2.75
41 42 2.275318 GCACCTAGTTGCACAGATCTC 58.725 52.381 7.48 0.00 42.49 2.75
42 43 2.093764 GCACCTAGTTGCACAGATCTCT 60.094 50.000 7.48 0.00 42.49 3.10
43 44 4.228356 GCACCTAGTTGCACAGATCTCTG 61.228 52.174 7.48 5.66 42.49 3.35
57 58 6.660887 CAGATCTCTGGAAAAGAAAGTAGC 57.339 41.667 0.00 0.00 40.20 3.58
58 59 5.290643 CAGATCTCTGGAAAAGAAAGTAGCG 59.709 44.000 0.00 0.00 40.20 4.26
59 60 4.866508 TCTCTGGAAAAGAAAGTAGCGA 57.133 40.909 0.00 0.00 33.37 4.93
60 61 5.407407 TCTCTGGAAAAGAAAGTAGCGAT 57.593 39.130 0.00 0.00 33.37 4.58
61 62 5.171476 TCTCTGGAAAAGAAAGTAGCGATG 58.829 41.667 0.00 0.00 33.37 3.84
62 63 5.047306 TCTCTGGAAAAGAAAGTAGCGATGA 60.047 40.000 0.00 0.00 33.37 2.92
63 64 5.734720 TCTGGAAAAGAAAGTAGCGATGAT 58.265 37.500 0.00 0.00 29.54 2.45
64 65 5.582269 TCTGGAAAAGAAAGTAGCGATGATG 59.418 40.000 0.00 0.00 29.54 3.07
65 66 5.487433 TGGAAAAGAAAGTAGCGATGATGA 58.513 37.500 0.00 0.00 0.00 2.92
66 67 6.115446 TGGAAAAGAAAGTAGCGATGATGAT 58.885 36.000 0.00 0.00 0.00 2.45
67 68 6.037500 TGGAAAAGAAAGTAGCGATGATGATG 59.962 38.462 0.00 0.00 0.00 3.07
68 69 6.037610 GGAAAAGAAAGTAGCGATGATGATGT 59.962 38.462 0.00 0.00 0.00 3.06
69 70 6.992063 AAAGAAAGTAGCGATGATGATGTT 57.008 33.333 0.00 0.00 0.00 2.71
70 71 6.992063 AAGAAAGTAGCGATGATGATGTTT 57.008 33.333 0.00 0.00 0.00 2.83
71 72 6.595772 AGAAAGTAGCGATGATGATGTTTC 57.404 37.500 0.00 0.00 0.00 2.78
72 73 6.344500 AGAAAGTAGCGATGATGATGTTTCT 58.656 36.000 0.00 0.00 0.00 2.52
73 74 7.492524 AGAAAGTAGCGATGATGATGTTTCTA 58.507 34.615 0.00 0.00 31.61 2.10
74 75 7.651304 AGAAAGTAGCGATGATGATGTTTCTAG 59.349 37.037 0.00 0.00 31.61 2.43
75 76 6.641169 AGTAGCGATGATGATGTTTCTAGA 57.359 37.500 0.00 0.00 0.00 2.43
76 77 6.676950 AGTAGCGATGATGATGTTTCTAGAG 58.323 40.000 0.00 0.00 0.00 2.43
77 78 5.781210 AGCGATGATGATGTTTCTAGAGA 57.219 39.130 0.00 0.00 0.00 3.10
78 79 6.343716 AGCGATGATGATGTTTCTAGAGAT 57.656 37.500 0.00 0.00 0.00 2.75
79 80 6.157904 AGCGATGATGATGTTTCTAGAGATG 58.842 40.000 0.00 0.00 0.00 2.90
80 81 5.163972 GCGATGATGATGTTTCTAGAGATGC 60.164 44.000 0.00 0.00 0.00 3.91
81 82 5.924825 CGATGATGATGTTTCTAGAGATGCA 59.075 40.000 0.00 0.00 0.00 3.96
82 83 6.128876 CGATGATGATGTTTCTAGAGATGCAC 60.129 42.308 0.00 0.00 0.00 4.57
83 84 5.363101 TGATGATGTTTCTAGAGATGCACC 58.637 41.667 0.00 0.00 0.00 5.01
84 85 3.785486 TGATGTTTCTAGAGATGCACCG 58.215 45.455 0.00 0.00 0.00 4.94
85 86 3.447229 TGATGTTTCTAGAGATGCACCGA 59.553 43.478 0.00 0.00 0.00 4.69
86 87 4.100035 TGATGTTTCTAGAGATGCACCGAT 59.900 41.667 0.00 0.00 0.00 4.18
87 88 4.471904 TGTTTCTAGAGATGCACCGATT 57.528 40.909 0.00 0.00 0.00 3.34
88 89 5.592104 TGTTTCTAGAGATGCACCGATTA 57.408 39.130 0.00 0.00 0.00 1.75
89 90 5.592054 TGTTTCTAGAGATGCACCGATTAG 58.408 41.667 0.00 0.00 0.00 1.73
90 91 5.359860 TGTTTCTAGAGATGCACCGATTAGA 59.640 40.000 0.00 0.00 0.00 2.10
91 92 5.440234 TTCTAGAGATGCACCGATTAGAC 57.560 43.478 0.00 0.00 0.00 2.59
92 93 4.720046 TCTAGAGATGCACCGATTAGACT 58.280 43.478 0.00 0.00 0.00 3.24
93 94 5.133941 TCTAGAGATGCACCGATTAGACTT 58.866 41.667 0.00 0.00 0.00 3.01
94 95 4.744795 AGAGATGCACCGATTAGACTTT 57.255 40.909 0.00 0.00 0.00 2.66
95 96 5.091261 AGAGATGCACCGATTAGACTTTT 57.909 39.130 0.00 0.00 0.00 2.27
96 97 4.872691 AGAGATGCACCGATTAGACTTTTG 59.127 41.667 0.00 0.00 0.00 2.44
97 98 4.579869 AGATGCACCGATTAGACTTTTGT 58.420 39.130 0.00 0.00 0.00 2.83
98 99 5.003804 AGATGCACCGATTAGACTTTTGTT 58.996 37.500 0.00 0.00 0.00 2.83
99 100 4.481930 TGCACCGATTAGACTTTTGTTG 57.518 40.909 0.00 0.00 0.00 3.33
100 101 3.234386 GCACCGATTAGACTTTTGTTGC 58.766 45.455 0.00 0.00 0.00 4.17
101 102 3.058224 GCACCGATTAGACTTTTGTTGCT 60.058 43.478 0.00 0.00 0.00 3.91
102 103 4.556699 GCACCGATTAGACTTTTGTTGCTT 60.557 41.667 0.00 0.00 0.00 3.91
103 104 5.147162 CACCGATTAGACTTTTGTTGCTTC 58.853 41.667 0.00 0.00 0.00 3.86
104 105 4.819630 ACCGATTAGACTTTTGTTGCTTCA 59.180 37.500 0.00 0.00 0.00 3.02
105 106 5.473504 ACCGATTAGACTTTTGTTGCTTCAT 59.526 36.000 0.00 0.00 0.00 2.57
106 107 6.653320 ACCGATTAGACTTTTGTTGCTTCATA 59.347 34.615 0.00 0.00 0.00 2.15
107 108 7.336931 ACCGATTAGACTTTTGTTGCTTCATAT 59.663 33.333 0.00 0.00 0.00 1.78
108 109 8.184192 CCGATTAGACTTTTGTTGCTTCATATT 58.816 33.333 0.00 0.00 0.00 1.28
109 110 9.559958 CGATTAGACTTTTGTTGCTTCATATTT 57.440 29.630 0.00 0.00 0.00 1.40
112 113 7.951530 AGACTTTTGTTGCTTCATATTTTGG 57.048 32.000 0.00 0.00 0.00 3.28
113 114 6.424812 AGACTTTTGTTGCTTCATATTTTGGC 59.575 34.615 0.00 0.00 0.00 4.52
114 115 5.177327 ACTTTTGTTGCTTCATATTTTGGCG 59.823 36.000 0.00 0.00 0.00 5.69
115 116 4.511617 TTGTTGCTTCATATTTTGGCGA 57.488 36.364 0.00 0.00 0.00 5.54
116 117 4.717233 TGTTGCTTCATATTTTGGCGAT 57.283 36.364 0.00 0.00 0.00 4.58
117 118 5.826601 TGTTGCTTCATATTTTGGCGATA 57.173 34.783 0.00 0.00 0.00 2.92
118 119 6.201226 TGTTGCTTCATATTTTGGCGATAA 57.799 33.333 0.00 0.00 0.00 1.75
119 120 6.264832 TGTTGCTTCATATTTTGGCGATAAG 58.735 36.000 0.00 0.00 0.00 1.73
120 121 5.437289 TGCTTCATATTTTGGCGATAAGG 57.563 39.130 0.00 0.00 0.00 2.69
121 122 4.278170 TGCTTCATATTTTGGCGATAAGGG 59.722 41.667 0.00 0.00 0.00 3.95
122 123 4.321230 GCTTCATATTTTGGCGATAAGGGG 60.321 45.833 0.00 0.00 0.00 4.79
123 124 4.715534 TCATATTTTGGCGATAAGGGGA 57.284 40.909 0.00 0.00 0.00 4.81
124 125 5.055265 TCATATTTTGGCGATAAGGGGAA 57.945 39.130 0.00 0.00 0.00 3.97
125 126 5.640147 TCATATTTTGGCGATAAGGGGAAT 58.360 37.500 0.00 0.00 0.00 3.01
126 127 6.074648 TCATATTTTGGCGATAAGGGGAATT 58.925 36.000 0.00 0.00 0.00 2.17
127 128 6.553100 TCATATTTTGGCGATAAGGGGAATTT 59.447 34.615 0.00 0.00 0.00 1.82
128 129 5.692115 ATTTTGGCGATAAGGGGAATTTT 57.308 34.783 0.00 0.00 0.00 1.82
129 130 4.464069 TTTGGCGATAAGGGGAATTTTG 57.536 40.909 0.00 0.00 0.00 2.44
130 131 3.094484 TGGCGATAAGGGGAATTTTGT 57.906 42.857 0.00 0.00 0.00 2.83
131 132 2.757868 TGGCGATAAGGGGAATTTTGTG 59.242 45.455 0.00 0.00 0.00 3.33
132 133 2.758423 GGCGATAAGGGGAATTTTGTGT 59.242 45.455 0.00 0.00 0.00 3.72
133 134 3.949113 GGCGATAAGGGGAATTTTGTGTA 59.051 43.478 0.00 0.00 0.00 2.90
134 135 4.201980 GGCGATAAGGGGAATTTTGTGTAC 60.202 45.833 0.00 0.00 0.00 2.90
135 136 4.201980 GCGATAAGGGGAATTTTGTGTACC 60.202 45.833 0.00 0.00 0.00 3.34
136 137 4.337274 CGATAAGGGGAATTTTGTGTACCC 59.663 45.833 0.00 0.00 39.79 3.69
141 142 4.691326 GGGAATTTTGTGTACCCCAAAA 57.309 40.909 17.64 17.64 43.60 2.44
142 143 4.637276 GGGAATTTTGTGTACCCCAAAAG 58.363 43.478 19.18 0.00 42.96 2.27
143 144 4.345547 GGGAATTTTGTGTACCCCAAAAGA 59.654 41.667 19.18 5.01 42.96 2.52
144 145 5.294356 GGAATTTTGTGTACCCCAAAAGAC 58.706 41.667 19.18 15.71 42.96 3.01
145 146 4.948341 ATTTTGTGTACCCCAAAAGACC 57.052 40.909 19.18 0.00 42.96 3.85
146 147 3.383698 TTTGTGTACCCCAAAAGACCA 57.616 42.857 5.58 0.00 0.00 4.02
147 148 3.383698 TTGTGTACCCCAAAAGACCAA 57.616 42.857 0.00 0.00 0.00 3.67
148 149 2.938838 TGTGTACCCCAAAAGACCAAG 58.061 47.619 0.00 0.00 0.00 3.61
149 150 2.235891 GTGTACCCCAAAAGACCAAGG 58.764 52.381 0.00 0.00 0.00 3.61
150 151 1.254026 GTACCCCAAAAGACCAAGGC 58.746 55.000 0.00 0.00 0.00 4.35
151 152 0.854218 TACCCCAAAAGACCAAGGCA 59.146 50.000 0.00 0.00 0.00 4.75
152 153 0.469892 ACCCCAAAAGACCAAGGCAG 60.470 55.000 0.00 0.00 0.00 4.85
153 154 0.469892 CCCCAAAAGACCAAGGCAGT 60.470 55.000 0.00 0.00 0.00 4.40
154 155 0.961753 CCCAAAAGACCAAGGCAGTC 59.038 55.000 0.00 0.00 34.31 3.51
155 156 1.479389 CCCAAAAGACCAAGGCAGTCT 60.479 52.381 0.00 0.00 46.50 3.24
156 157 1.610522 CCAAAAGACCAAGGCAGTCTG 59.389 52.381 5.74 0.00 43.77 3.51
157 158 1.610522 CAAAAGACCAAGGCAGTCTGG 59.389 52.381 1.14 0.25 43.77 3.86
158 159 0.111253 AAAGACCAAGGCAGTCTGGG 59.889 55.000 1.14 0.00 43.77 4.45
159 160 2.360475 GACCAAGGCAGTCTGGGC 60.360 66.667 0.00 0.00 40.41 5.36
160 161 3.177884 ACCAAGGCAGTCTGGGCA 61.178 61.111 0.00 0.00 40.41 5.36
161 162 2.357836 CCAAGGCAGTCTGGGCAT 59.642 61.111 1.14 0.00 35.46 4.40
162 163 2.050350 CCAAGGCAGTCTGGGCATG 61.050 63.158 1.14 0.00 35.46 4.06
163 164 2.362120 AAGGCAGTCTGGGCATGC 60.362 61.111 9.90 9.90 39.25 4.06
164 165 3.214190 AAGGCAGTCTGGGCATGCA 62.214 57.895 21.36 0.00 41.78 3.96
165 166 2.677524 GGCAGTCTGGGCATGCAA 60.678 61.111 21.36 6.05 41.78 4.08
166 167 2.707849 GGCAGTCTGGGCATGCAAG 61.708 63.158 21.36 16.21 41.78 4.01
167 168 1.676635 GCAGTCTGGGCATGCAAGA 60.677 57.895 21.36 18.33 39.75 3.02
168 169 1.035932 GCAGTCTGGGCATGCAAGAT 61.036 55.000 21.36 8.90 39.75 2.40
169 170 1.471119 CAGTCTGGGCATGCAAGATT 58.529 50.000 21.36 15.06 0.00 2.40
170 171 1.822990 CAGTCTGGGCATGCAAGATTT 59.177 47.619 21.36 11.04 0.00 2.17
171 172 3.018856 CAGTCTGGGCATGCAAGATTTA 58.981 45.455 21.36 0.00 0.00 1.40
172 173 3.066342 CAGTCTGGGCATGCAAGATTTAG 59.934 47.826 21.36 9.00 0.00 1.85
173 174 3.054139 AGTCTGGGCATGCAAGATTTAGA 60.054 43.478 21.36 8.58 0.00 2.10
174 175 3.887716 GTCTGGGCATGCAAGATTTAGAT 59.112 43.478 21.36 0.00 0.00 1.98
175 176 3.887110 TCTGGGCATGCAAGATTTAGATG 59.113 43.478 21.36 0.00 0.00 2.90
176 177 3.634504 TGGGCATGCAAGATTTAGATGT 58.365 40.909 21.36 0.00 0.00 3.06
177 178 4.025360 TGGGCATGCAAGATTTAGATGTT 58.975 39.130 21.36 0.00 0.00 2.71
178 179 4.098349 TGGGCATGCAAGATTTAGATGTTC 59.902 41.667 21.36 0.00 0.00 3.18
179 180 4.098349 GGGCATGCAAGATTTAGATGTTCA 59.902 41.667 21.36 0.00 0.00 3.18
180 181 5.394443 GGGCATGCAAGATTTAGATGTTCAA 60.394 40.000 21.36 0.00 0.00 2.69
181 182 6.101332 GGCATGCAAGATTTAGATGTTCAAA 58.899 36.000 21.36 0.00 0.00 2.69
182 183 6.591062 GGCATGCAAGATTTAGATGTTCAAAA 59.409 34.615 21.36 0.00 0.00 2.44
183 184 7.279313 GGCATGCAAGATTTAGATGTTCAAAAT 59.721 33.333 21.36 0.00 0.00 1.82
184 185 9.304731 GCATGCAAGATTTAGATGTTCAAAATA 57.695 29.630 14.21 0.00 0.00 1.40
194 195 9.656040 TTTAGATGTTCAAAATAAATGCATGCT 57.344 25.926 20.33 0.40 0.00 3.79
195 196 9.656040 TTAGATGTTCAAAATAAATGCATGCTT 57.344 25.926 20.33 10.16 0.00 3.91
197 198 9.309516 AGATGTTCAAAATAAATGCATGCTTAG 57.690 29.630 20.33 1.39 0.00 2.18
198 199 9.090692 GATGTTCAAAATAAATGCATGCTTAGT 57.909 29.630 20.33 6.54 0.00 2.24
200 201 9.920133 TGTTCAAAATAAATGCATGCTTAGTAA 57.080 25.926 20.33 0.00 0.00 2.24
205 206 7.951530 AATAAATGCATGCTTAGTAAATGGC 57.048 32.000 20.33 0.00 0.00 4.40
206 207 5.603170 AAATGCATGCTTAGTAAATGGCT 57.397 34.783 20.33 0.00 0.00 4.75
207 208 4.579454 ATGCATGCTTAGTAAATGGCTG 57.421 40.909 20.33 0.00 0.00 4.85
208 209 3.355378 TGCATGCTTAGTAAATGGCTGT 58.645 40.909 20.33 0.00 0.00 4.40
209 210 3.129113 TGCATGCTTAGTAAATGGCTGTG 59.871 43.478 20.33 0.00 0.00 3.66
210 211 3.129287 GCATGCTTAGTAAATGGCTGTGT 59.871 43.478 11.37 0.00 0.00 3.72
211 212 4.335315 GCATGCTTAGTAAATGGCTGTGTA 59.665 41.667 11.37 0.00 0.00 2.90
212 213 5.163663 GCATGCTTAGTAAATGGCTGTGTAA 60.164 40.000 11.37 0.00 0.00 2.41
213 214 6.624861 GCATGCTTAGTAAATGGCTGTGTAAA 60.625 38.462 11.37 0.00 0.00 2.01
214 215 7.483307 CATGCTTAGTAAATGGCTGTGTAAAT 58.517 34.615 0.00 0.00 0.00 1.40
215 216 7.461182 TGCTTAGTAAATGGCTGTGTAAATT 57.539 32.000 0.00 0.00 0.00 1.82
216 217 7.312154 TGCTTAGTAAATGGCTGTGTAAATTG 58.688 34.615 0.00 0.00 0.00 2.32
217 218 6.253512 GCTTAGTAAATGGCTGTGTAAATTGC 59.746 38.462 0.00 0.00 0.00 3.56
218 219 5.982890 AGTAAATGGCTGTGTAAATTGCT 57.017 34.783 0.00 0.00 0.00 3.91
219 220 6.345096 AGTAAATGGCTGTGTAAATTGCTT 57.655 33.333 0.00 0.00 0.00 3.91
220 221 6.389906 AGTAAATGGCTGTGTAAATTGCTTC 58.610 36.000 0.00 0.00 0.00 3.86
221 222 3.874392 ATGGCTGTGTAAATTGCTTCC 57.126 42.857 0.00 0.00 0.00 3.46
222 223 2.591923 TGGCTGTGTAAATTGCTTCCA 58.408 42.857 0.00 0.00 0.00 3.53
223 224 2.557924 TGGCTGTGTAAATTGCTTCCAG 59.442 45.455 0.00 0.00 0.00 3.86
224 225 2.819608 GGCTGTGTAAATTGCTTCCAGA 59.180 45.455 0.00 0.00 0.00 3.86
225 226 3.119708 GGCTGTGTAAATTGCTTCCAGAG 60.120 47.826 0.00 0.00 0.00 3.35
226 227 3.753272 GCTGTGTAAATTGCTTCCAGAGA 59.247 43.478 0.00 0.00 0.00 3.10
227 228 4.216257 GCTGTGTAAATTGCTTCCAGAGAA 59.784 41.667 0.00 0.00 0.00 2.87
228 229 5.105997 GCTGTGTAAATTGCTTCCAGAGAAT 60.106 40.000 0.00 0.00 0.00 2.40
229 230 6.258230 TGTGTAAATTGCTTCCAGAGAATG 57.742 37.500 0.00 0.00 0.00 2.67
237 238 3.727387 CCAGAGAATGGGGTCCGT 58.273 61.111 0.00 0.00 46.36 4.69
238 239 1.522569 CCAGAGAATGGGGTCCGTC 59.477 63.158 0.00 0.00 46.36 4.79
239 240 1.264749 CCAGAGAATGGGGTCCGTCA 61.265 60.000 0.00 0.00 46.36 4.35
240 241 0.613260 CAGAGAATGGGGTCCGTCAA 59.387 55.000 0.00 0.00 0.00 3.18
241 242 1.003118 CAGAGAATGGGGTCCGTCAAA 59.997 52.381 0.00 0.00 0.00 2.69
242 243 1.916181 AGAGAATGGGGTCCGTCAAAT 59.084 47.619 0.00 0.00 0.00 2.32
243 244 2.092914 AGAGAATGGGGTCCGTCAAATC 60.093 50.000 0.00 0.00 0.00 2.17
244 245 1.014352 GAATGGGGTCCGTCAAATCG 58.986 55.000 0.00 0.00 0.00 3.34
245 246 1.029947 AATGGGGTCCGTCAAATCGC 61.030 55.000 0.00 0.00 0.00 4.58
246 247 1.910580 ATGGGGTCCGTCAAATCGCT 61.911 55.000 0.00 0.00 0.00 4.93
247 248 1.376812 GGGGTCCGTCAAATCGCTT 60.377 57.895 0.00 0.00 0.00 4.68
248 249 1.366854 GGGGTCCGTCAAATCGCTTC 61.367 60.000 0.00 0.00 0.00 3.86
249 250 0.391263 GGGTCCGTCAAATCGCTTCT 60.391 55.000 0.00 0.00 0.00 2.85
250 251 1.439679 GGTCCGTCAAATCGCTTCTT 58.560 50.000 0.00 0.00 0.00 2.52
251 252 1.393883 GGTCCGTCAAATCGCTTCTTC 59.606 52.381 0.00 0.00 0.00 2.87
252 253 2.066262 GTCCGTCAAATCGCTTCTTCA 58.934 47.619 0.00 0.00 0.00 3.02
253 254 2.092838 GTCCGTCAAATCGCTTCTTCAG 59.907 50.000 0.00 0.00 0.00 3.02
254 255 2.029380 TCCGTCAAATCGCTTCTTCAGA 60.029 45.455 0.00 0.00 0.00 3.27
255 256 2.736721 CCGTCAAATCGCTTCTTCAGAA 59.263 45.455 0.00 0.00 0.00 3.02
256 257 3.423645 CCGTCAAATCGCTTCTTCAGAAC 60.424 47.826 0.00 0.00 0.00 3.01
257 258 3.184379 CGTCAAATCGCTTCTTCAGAACA 59.816 43.478 0.00 0.00 0.00 3.18
258 259 4.318760 CGTCAAATCGCTTCTTCAGAACAA 60.319 41.667 0.00 0.00 0.00 2.83
259 260 5.510671 GTCAAATCGCTTCTTCAGAACAAA 58.489 37.500 0.00 0.00 0.00 2.83
260 261 6.145535 GTCAAATCGCTTCTTCAGAACAAAT 58.854 36.000 0.00 0.00 0.00 2.32
261 262 7.298122 GTCAAATCGCTTCTTCAGAACAAATA 58.702 34.615 0.00 0.00 0.00 1.40
262 263 7.269297 GTCAAATCGCTTCTTCAGAACAAATAC 59.731 37.037 0.00 0.00 0.00 1.89
263 264 7.173218 TCAAATCGCTTCTTCAGAACAAATACT 59.827 33.333 0.00 0.00 0.00 2.12
264 265 7.440523 AATCGCTTCTTCAGAACAAATACTT 57.559 32.000 0.00 0.00 0.00 2.24
265 266 6.228273 TCGCTTCTTCAGAACAAATACTTG 57.772 37.500 0.00 0.00 38.61 3.16
267 268 6.926826 TCGCTTCTTCAGAACAAATACTTGTA 59.073 34.615 0.00 0.00 45.25 2.41
268 269 7.116376 TCGCTTCTTCAGAACAAATACTTGTAG 59.884 37.037 0.00 0.00 45.25 2.74
269 270 7.116376 CGCTTCTTCAGAACAAATACTTGTAGA 59.884 37.037 0.00 0.00 45.25 2.59
270 271 8.224437 GCTTCTTCAGAACAAATACTTGTAGAC 58.776 37.037 0.00 0.00 45.25 2.59
271 272 8.603242 TTCTTCAGAACAAATACTTGTAGACC 57.397 34.615 0.00 0.00 45.25 3.85
272 273 7.159372 TCTTCAGAACAAATACTTGTAGACCC 58.841 38.462 0.00 0.00 45.25 4.46
273 274 5.801380 TCAGAACAAATACTTGTAGACCCC 58.199 41.667 0.00 0.00 45.25 4.95
274 275 5.308497 TCAGAACAAATACTTGTAGACCCCA 59.692 40.000 0.00 0.00 45.25 4.96
275 276 6.012858 TCAGAACAAATACTTGTAGACCCCAT 60.013 38.462 0.00 0.00 45.25 4.00
276 277 6.316390 CAGAACAAATACTTGTAGACCCCATC 59.684 42.308 0.00 0.00 45.25 3.51
277 278 5.112129 ACAAATACTTGTAGACCCCATCC 57.888 43.478 0.00 0.00 44.14 3.51
278 279 4.538490 ACAAATACTTGTAGACCCCATCCA 59.462 41.667 0.00 0.00 44.14 3.41
279 280 5.014755 ACAAATACTTGTAGACCCCATCCAA 59.985 40.000 0.00 0.00 44.14 3.53
280 281 4.772886 ATACTTGTAGACCCCATCCAAC 57.227 45.455 0.00 0.00 0.00 3.77
281 282 2.632537 ACTTGTAGACCCCATCCAACT 58.367 47.619 0.00 0.00 0.00 3.16
282 283 2.572104 ACTTGTAGACCCCATCCAACTC 59.428 50.000 0.00 0.00 0.00 3.01
283 284 2.642171 TGTAGACCCCATCCAACTCT 57.358 50.000 0.00 0.00 0.00 3.24
284 285 2.915869 TGTAGACCCCATCCAACTCTT 58.084 47.619 0.00 0.00 0.00 2.85
285 286 4.069312 TGTAGACCCCATCCAACTCTTA 57.931 45.455 0.00 0.00 0.00 2.10
286 287 4.631234 TGTAGACCCCATCCAACTCTTAT 58.369 43.478 0.00 0.00 0.00 1.73
287 288 5.784023 TGTAGACCCCATCCAACTCTTATA 58.216 41.667 0.00 0.00 0.00 0.98
288 289 5.601313 TGTAGACCCCATCCAACTCTTATAC 59.399 44.000 0.00 0.00 0.00 1.47
289 290 4.897051 AGACCCCATCCAACTCTTATACT 58.103 43.478 0.00 0.00 0.00 2.12
290 291 4.902448 AGACCCCATCCAACTCTTATACTC 59.098 45.833 0.00 0.00 0.00 2.59
291 292 3.974642 ACCCCATCCAACTCTTATACTCC 59.025 47.826 0.00 0.00 0.00 3.85
292 293 3.973973 CCCCATCCAACTCTTATACTCCA 59.026 47.826 0.00 0.00 0.00 3.86
293 294 4.599241 CCCCATCCAACTCTTATACTCCAT 59.401 45.833 0.00 0.00 0.00 3.41
294 295 5.073691 CCCCATCCAACTCTTATACTCCATT 59.926 44.000 0.00 0.00 0.00 3.16
295 296 6.000219 CCCATCCAACTCTTATACTCCATTG 59.000 44.000 0.00 0.00 0.00 2.82
296 297 6.409695 CCCATCCAACTCTTATACTCCATTGT 60.410 42.308 0.00 0.00 0.00 2.71
297 298 7.202093 CCCATCCAACTCTTATACTCCATTGTA 60.202 40.741 0.00 0.00 0.00 2.41
298 299 8.210946 CCATCCAACTCTTATACTCCATTGTAA 58.789 37.037 0.00 0.00 0.00 2.41
299 300 9.784531 CATCCAACTCTTATACTCCATTGTAAT 57.215 33.333 0.00 0.00 0.00 1.89
343 344 8.048534 TGTAAGTGCGATATAGGACTATTACC 57.951 38.462 10.26 0.00 42.01 2.85
344 345 6.527057 AAGTGCGATATAGGACTATTACCC 57.473 41.667 10.26 0.00 42.01 3.69
345 346 5.577100 AGTGCGATATAGGACTATTACCCA 58.423 41.667 8.21 0.00 41.04 4.51
346 347 6.195700 AGTGCGATATAGGACTATTACCCAT 58.804 40.000 8.21 0.00 41.04 4.00
347 348 6.096987 AGTGCGATATAGGACTATTACCCATG 59.903 42.308 8.21 0.00 41.04 3.66
348 349 5.955959 TGCGATATAGGACTATTACCCATGT 59.044 40.000 0.00 0.00 0.00 3.21
349 350 6.096423 TGCGATATAGGACTATTACCCATGTC 59.904 42.308 0.00 0.00 0.00 3.06
350 351 6.726230 CGATATAGGACTATTACCCATGTCG 58.274 44.000 0.00 0.00 0.00 4.35
351 352 6.238676 CGATATAGGACTATTACCCATGTCGG 60.239 46.154 0.00 0.00 0.00 4.79
360 361 2.124570 CCATGTCGGGGGCTGAAG 60.125 66.667 0.00 0.00 0.00 3.02
361 362 2.825836 CATGTCGGGGGCTGAAGC 60.826 66.667 0.00 0.00 41.14 3.86
362 363 3.011517 ATGTCGGGGGCTGAAGCT 61.012 61.111 1.74 0.00 41.70 3.74
363 364 3.335356 ATGTCGGGGGCTGAAGCTG 62.335 63.158 1.74 0.00 41.70 4.24
364 365 4.785453 GTCGGGGGCTGAAGCTGG 62.785 72.222 1.74 0.00 41.70 4.85
367 368 3.661648 GGGGGCTGAAGCTGGGAA 61.662 66.667 1.74 0.00 41.70 3.97
368 369 2.440599 GGGGCTGAAGCTGGGAAA 59.559 61.111 1.74 0.00 41.70 3.13
369 370 1.979155 GGGGCTGAAGCTGGGAAAC 60.979 63.158 1.74 0.00 41.70 2.78
370 371 1.979155 GGGCTGAAGCTGGGAAACC 60.979 63.158 1.74 0.00 44.98 3.27
371 372 1.075659 GGCTGAAGCTGGGAAACCT 59.924 57.895 1.74 0.00 45.00 3.50
372 373 0.962855 GGCTGAAGCTGGGAAACCTC 60.963 60.000 1.74 0.00 45.00 3.85
389 390 8.384607 GGAAACCTCCATATATCTCTTTTGTC 57.615 38.462 0.00 0.00 41.96 3.18
390 391 8.214364 GGAAACCTCCATATATCTCTTTTGTCT 58.786 37.037 0.00 0.00 41.96 3.41
391 392 9.267084 GAAACCTCCATATATCTCTTTTGTCTC 57.733 37.037 0.00 0.00 0.00 3.36
392 393 7.309770 ACCTCCATATATCTCTTTTGTCTCC 57.690 40.000 0.00 0.00 0.00 3.71
393 394 6.015010 ACCTCCATATATCTCTTTTGTCTCCG 60.015 42.308 0.00 0.00 0.00 4.63
394 395 6.209589 CCTCCATATATCTCTTTTGTCTCCGA 59.790 42.308 0.00 0.00 0.00 4.55
395 396 6.982852 TCCATATATCTCTTTTGTCTCCGAC 58.017 40.000 0.00 0.00 0.00 4.79
396 397 6.549736 TCCATATATCTCTTTTGTCTCCGACA 59.450 38.462 0.00 0.00 41.09 4.35
404 405 2.762535 TTGTCTCCGACAAGATTCCC 57.237 50.000 5.40 0.00 45.88 3.97
405 406 1.938585 TGTCTCCGACAAGATTCCCT 58.061 50.000 0.00 0.00 39.78 4.20
406 407 1.825474 TGTCTCCGACAAGATTCCCTC 59.175 52.381 0.00 0.00 39.78 4.30
407 408 1.103803 TCTCCGACAAGATTCCCTCG 58.896 55.000 0.00 0.00 0.00 4.63
408 409 1.103803 CTCCGACAAGATTCCCTCGA 58.896 55.000 0.00 0.00 0.00 4.04
409 410 1.066303 CTCCGACAAGATTCCCTCGAG 59.934 57.143 5.13 5.13 0.00 4.04
410 411 0.528684 CCGACAAGATTCCCTCGAGC 60.529 60.000 6.99 0.00 0.00 5.03
411 412 0.457851 CGACAAGATTCCCTCGAGCT 59.542 55.000 6.99 0.00 0.00 4.09
412 413 1.535015 CGACAAGATTCCCTCGAGCTC 60.535 57.143 6.99 2.73 0.00 4.09
413 414 1.754226 GACAAGATTCCCTCGAGCTCT 59.246 52.381 12.85 3.16 0.00 4.09
414 415 1.480137 ACAAGATTCCCTCGAGCTCTG 59.520 52.381 12.85 5.69 0.00 3.35
415 416 1.753649 CAAGATTCCCTCGAGCTCTGA 59.246 52.381 12.85 9.89 0.00 3.27
416 417 2.151502 AGATTCCCTCGAGCTCTGAA 57.848 50.000 12.85 9.40 0.00 3.02
417 418 1.754226 AGATTCCCTCGAGCTCTGAAC 59.246 52.381 12.85 4.92 0.00 3.18
418 419 1.754226 GATTCCCTCGAGCTCTGAACT 59.246 52.381 12.85 0.85 0.00 3.01
419 420 1.178276 TTCCCTCGAGCTCTGAACTC 58.822 55.000 12.85 0.00 0.00 3.01
420 421 0.681564 TCCCTCGAGCTCTGAACTCC 60.682 60.000 12.85 0.00 0.00 3.85
421 422 1.671901 CCCTCGAGCTCTGAACTCCC 61.672 65.000 12.85 0.00 0.00 4.30
422 423 0.682855 CCTCGAGCTCTGAACTCCCT 60.683 60.000 12.85 0.00 0.00 4.20
423 424 0.738389 CTCGAGCTCTGAACTCCCTC 59.262 60.000 12.85 0.00 0.00 4.30
424 425 0.329931 TCGAGCTCTGAACTCCCTCT 59.670 55.000 12.85 0.00 0.00 3.69
425 426 0.738389 CGAGCTCTGAACTCCCTCTC 59.262 60.000 12.85 0.00 0.00 3.20
426 427 1.681780 CGAGCTCTGAACTCCCTCTCT 60.682 57.143 12.85 0.00 0.00 3.10
427 428 1.750778 GAGCTCTGAACTCCCTCTCTG 59.249 57.143 6.43 0.00 0.00 3.35
428 429 1.077005 AGCTCTGAACTCCCTCTCTGT 59.923 52.381 0.00 0.00 0.00 3.41
429 430 2.310349 AGCTCTGAACTCCCTCTCTGTA 59.690 50.000 0.00 0.00 0.00 2.74
430 431 3.052944 AGCTCTGAACTCCCTCTCTGTAT 60.053 47.826 0.00 0.00 0.00 2.29
431 432 3.704061 GCTCTGAACTCCCTCTCTGTATT 59.296 47.826 0.00 0.00 0.00 1.89
432 433 4.441356 GCTCTGAACTCCCTCTCTGTATTG 60.441 50.000 0.00 0.00 0.00 1.90
433 434 4.678256 TCTGAACTCCCTCTCTGTATTGT 58.322 43.478 0.00 0.00 0.00 2.71
434 435 4.707448 TCTGAACTCCCTCTCTGTATTGTC 59.293 45.833 0.00 0.00 0.00 3.18
435 436 4.678256 TGAACTCCCTCTCTGTATTGTCT 58.322 43.478 0.00 0.00 0.00 3.41
436 437 5.087323 TGAACTCCCTCTCTGTATTGTCTT 58.913 41.667 0.00 0.00 0.00 3.01
437 438 5.186021 TGAACTCCCTCTCTGTATTGTCTTC 59.814 44.000 0.00 0.00 0.00 2.87
438 439 4.027437 ACTCCCTCTCTGTATTGTCTTCC 58.973 47.826 0.00 0.00 0.00 3.46
439 440 4.026744 CTCCCTCTCTGTATTGTCTTCCA 58.973 47.826 0.00 0.00 0.00 3.53
440 441 4.624913 TCCCTCTCTGTATTGTCTTCCAT 58.375 43.478 0.00 0.00 0.00 3.41
441 442 4.406972 TCCCTCTCTGTATTGTCTTCCATG 59.593 45.833 0.00 0.00 0.00 3.66
442 443 4.406972 CCCTCTCTGTATTGTCTTCCATGA 59.593 45.833 0.00 0.00 0.00 3.07
443 444 5.071519 CCCTCTCTGTATTGTCTTCCATGAT 59.928 44.000 0.00 0.00 0.00 2.45
444 445 6.222389 CCTCTCTGTATTGTCTTCCATGATC 58.778 44.000 0.00 0.00 0.00 2.92
445 446 6.041865 CCTCTCTGTATTGTCTTCCATGATCT 59.958 42.308 0.00 0.00 0.00 2.75
446 447 7.418827 CCTCTCTGTATTGTCTTCCATGATCTT 60.419 40.741 0.00 0.00 0.00 2.40
447 448 7.855375 TCTCTGTATTGTCTTCCATGATCTTT 58.145 34.615 0.00 0.00 0.00 2.52
448 449 8.981659 TCTCTGTATTGTCTTCCATGATCTTTA 58.018 33.333 0.00 0.00 0.00 1.85
449 450 9.258826 CTCTGTATTGTCTTCCATGATCTTTAG 57.741 37.037 0.00 0.00 0.00 1.85
450 451 8.981659 TCTGTATTGTCTTCCATGATCTTTAGA 58.018 33.333 0.00 0.00 0.00 2.10
451 452 8.948631 TGTATTGTCTTCCATGATCTTTAGAC 57.051 34.615 0.00 0.00 34.17 2.59
452 453 8.539544 TGTATTGTCTTCCATGATCTTTAGACA 58.460 33.333 0.00 11.12 39.93 3.41
453 454 7.856145 ATTGTCTTCCATGATCTTTAGACAC 57.144 36.000 13.30 0.00 40.98 3.67
454 455 6.358974 TGTCTTCCATGATCTTTAGACACA 57.641 37.500 0.00 0.00 37.62 3.72
455 456 6.768483 TGTCTTCCATGATCTTTAGACACAA 58.232 36.000 0.00 0.00 37.62 3.33
456 457 7.397221 TGTCTTCCATGATCTTTAGACACAAT 58.603 34.615 0.00 0.00 37.62 2.71
457 458 7.335171 TGTCTTCCATGATCTTTAGACACAATG 59.665 37.037 0.00 0.00 37.62 2.82
458 459 6.825213 TCTTCCATGATCTTTAGACACAATGG 59.175 38.462 0.00 0.00 0.00 3.16
459 460 6.312141 TCCATGATCTTTAGACACAATGGA 57.688 37.500 0.00 0.00 32.71 3.41
460 461 6.115446 TCCATGATCTTTAGACACAATGGAC 58.885 40.000 0.00 0.00 30.46 4.02
461 462 5.007039 CCATGATCTTTAGACACAATGGACG 59.993 44.000 0.00 0.00 0.00 4.79
462 463 3.932710 TGATCTTTAGACACAATGGACGC 59.067 43.478 0.00 0.00 0.00 5.19
463 464 2.333926 TCTTTAGACACAATGGACGCG 58.666 47.619 3.53 3.53 0.00 6.01
464 465 0.793861 TTTAGACACAATGGACGCGC 59.206 50.000 5.73 0.00 0.00 6.86
465 466 1.017177 TTAGACACAATGGACGCGCC 61.017 55.000 5.73 9.63 37.10 6.53
466 467 4.147322 GACACAATGGACGCGCCG 62.147 66.667 5.73 0.00 40.66 6.46
467 468 4.673298 ACACAATGGACGCGCCGA 62.673 61.111 5.73 0.00 40.66 5.54
468 469 4.147322 CACAATGGACGCGCCGAC 62.147 66.667 5.73 0.00 40.66 4.79
469 470 4.373116 ACAATGGACGCGCCGACT 62.373 61.111 5.73 0.00 40.66 4.18
470 471 3.853330 CAATGGACGCGCCGACTG 61.853 66.667 5.73 3.66 40.66 3.51
483 484 4.580835 GACTGGTCGAGCTCCAAC 57.419 61.111 16.64 6.75 34.35 3.77
484 485 1.666011 GACTGGTCGAGCTCCAACA 59.334 57.895 16.64 2.89 34.35 3.33
485 486 0.247736 GACTGGTCGAGCTCCAACAT 59.752 55.000 16.64 0.00 34.35 2.71
486 487 1.476891 GACTGGTCGAGCTCCAACATA 59.523 52.381 16.64 0.00 34.35 2.29
487 488 1.204941 ACTGGTCGAGCTCCAACATAC 59.795 52.381 16.64 0.00 34.35 2.39
488 489 0.535335 TGGTCGAGCTCCAACATACC 59.465 55.000 16.64 7.05 31.50 2.73
489 490 0.179081 GGTCGAGCTCCAACATACCC 60.179 60.000 8.47 0.00 0.00 3.69
490 491 0.535335 GTCGAGCTCCAACATACCCA 59.465 55.000 8.47 0.00 0.00 4.51
491 492 1.066430 GTCGAGCTCCAACATACCCAA 60.066 52.381 8.47 0.00 0.00 4.12
492 493 1.837439 TCGAGCTCCAACATACCCAAT 59.163 47.619 8.47 0.00 0.00 3.16
493 494 1.942657 CGAGCTCCAACATACCCAATG 59.057 52.381 8.47 0.00 41.74 2.82
494 495 2.419990 CGAGCTCCAACATACCCAATGA 60.420 50.000 8.47 0.00 39.07 2.57
495 496 3.209410 GAGCTCCAACATACCCAATGAG 58.791 50.000 0.87 0.00 39.07 2.90
496 497 1.678101 GCTCCAACATACCCAATGAGC 59.322 52.381 0.00 0.00 39.07 4.26
497 498 1.942657 CTCCAACATACCCAATGAGCG 59.057 52.381 0.00 0.00 39.07 5.03
498 499 1.024271 CCAACATACCCAATGAGCGG 58.976 55.000 0.00 0.00 39.07 5.52
505 506 4.147701 CCAATGAGCGGGATGACC 57.852 61.111 0.00 0.00 0.00 4.02
506 507 1.224315 CCAATGAGCGGGATGACCA 59.776 57.895 0.00 0.00 40.22 4.02
507 508 1.097547 CCAATGAGCGGGATGACCAC 61.098 60.000 0.00 0.00 40.22 4.16
508 509 1.097547 CAATGAGCGGGATGACCACC 61.098 60.000 0.00 0.00 40.22 4.61
509 510 2.270874 AATGAGCGGGATGACCACCC 62.271 60.000 0.00 0.00 43.57 4.61
517 518 4.652131 ATGACCACCCGCGCCAAA 62.652 61.111 0.00 0.00 0.00 3.28
522 523 3.291383 CACCCGCGCCAAAGGAAA 61.291 61.111 0.00 0.00 0.00 3.13
523 524 2.519780 ACCCGCGCCAAAGGAAAA 60.520 55.556 0.00 0.00 0.00 2.29
524 525 2.049526 CCCGCGCCAAAGGAAAAC 60.050 61.111 0.00 0.00 0.00 2.43
525 526 2.049526 CCGCGCCAAAGGAAAACC 60.050 61.111 0.00 0.00 0.00 3.27
526 527 2.725008 CGCGCCAAAGGAAAACCA 59.275 55.556 0.00 0.00 0.00 3.67
527 528 1.660264 CGCGCCAAAGGAAAACCAC 60.660 57.895 0.00 0.00 0.00 4.16
528 529 1.300620 GCGCCAAAGGAAAACCACC 60.301 57.895 0.00 0.00 0.00 4.61
529 530 2.022240 GCGCCAAAGGAAAACCACCA 62.022 55.000 0.00 0.00 0.00 4.17
530 531 0.249280 CGCCAAAGGAAAACCACCAC 60.249 55.000 0.00 0.00 0.00 4.16
531 532 0.249280 GCCAAAGGAAAACCACCACG 60.249 55.000 0.00 0.00 0.00 4.94
532 533 0.387565 CCAAAGGAAAACCACCACGG 59.612 55.000 0.00 0.00 42.50 4.94
533 534 0.249280 CAAAGGAAAACCACCACGGC 60.249 55.000 0.00 0.00 39.03 5.68
534 535 0.684805 AAAGGAAAACCACCACGGCA 60.685 50.000 0.00 0.00 39.03 5.69
535 536 1.106944 AAGGAAAACCACCACGGCAG 61.107 55.000 0.00 0.00 39.03 4.85
536 537 1.527380 GGAAAACCACCACGGCAGA 60.527 57.895 0.00 0.00 39.03 4.26
537 538 1.515521 GGAAAACCACCACGGCAGAG 61.516 60.000 0.00 0.00 39.03 3.35
538 539 1.515521 GAAAACCACCACGGCAGAGG 61.516 60.000 0.00 0.00 39.03 3.69
539 540 4.643387 AACCACCACGGCAGAGGC 62.643 66.667 0.00 0.00 39.03 4.70
550 551 2.494677 GCAGAGGCCGAGAGTAAGA 58.505 57.895 0.00 0.00 0.00 2.10
551 552 0.818296 GCAGAGGCCGAGAGTAAGAA 59.182 55.000 0.00 0.00 0.00 2.52
552 553 1.202359 GCAGAGGCCGAGAGTAAGAAG 60.202 57.143 0.00 0.00 0.00 2.85
553 554 1.407258 CAGAGGCCGAGAGTAAGAAGG 59.593 57.143 0.00 0.00 0.00 3.46
554 555 0.103390 GAGGCCGAGAGTAAGAAGGC 59.897 60.000 0.00 0.00 46.51 4.35
555 556 4.838046 GCCGAGAGTAAGAAGGCC 57.162 61.111 0.00 0.00 41.81 5.19
556 557 1.898154 GCCGAGAGTAAGAAGGCCA 59.102 57.895 5.01 0.00 41.81 5.36
557 558 0.249398 GCCGAGAGTAAGAAGGCCAA 59.751 55.000 5.01 0.00 41.81 4.52
558 559 1.338769 GCCGAGAGTAAGAAGGCCAAA 60.339 52.381 5.01 0.00 41.81 3.28
559 560 2.622436 CCGAGAGTAAGAAGGCCAAAG 58.378 52.381 5.01 0.00 0.00 2.77
560 561 2.233922 CCGAGAGTAAGAAGGCCAAAGA 59.766 50.000 5.01 0.00 0.00 2.52
561 562 3.516615 CGAGAGTAAGAAGGCCAAAGAG 58.483 50.000 5.01 0.00 0.00 2.85
562 563 3.677424 CGAGAGTAAGAAGGCCAAAGAGG 60.677 52.174 5.01 0.00 41.84 3.69
563 564 3.515901 GAGAGTAAGAAGGCCAAAGAGGA 59.484 47.826 5.01 0.00 41.22 3.71
564 565 3.517500 AGAGTAAGAAGGCCAAAGAGGAG 59.482 47.826 5.01 0.00 41.22 3.69
565 566 2.573915 AGTAAGAAGGCCAAAGAGGAGG 59.426 50.000 5.01 0.00 41.22 4.30
566 567 0.701147 AAGAAGGCCAAAGAGGAGGG 59.299 55.000 5.01 0.00 41.22 4.30
567 568 0.476611 AGAAGGCCAAAGAGGAGGGT 60.477 55.000 5.01 0.00 41.22 4.34
568 569 1.203440 AGAAGGCCAAAGAGGAGGGTA 60.203 52.381 5.01 0.00 41.22 3.69
569 570 1.210722 GAAGGCCAAAGAGGAGGGTAG 59.789 57.143 5.01 0.00 41.22 3.18
570 571 0.417841 AGGCCAAAGAGGAGGGTAGA 59.582 55.000 5.01 0.00 41.22 2.59
571 572 0.833949 GGCCAAAGAGGAGGGTAGAG 59.166 60.000 0.00 0.00 41.22 2.43
572 573 0.833949 GCCAAAGAGGAGGGTAGAGG 59.166 60.000 0.00 0.00 41.22 3.69
573 574 1.501582 CCAAAGAGGAGGGTAGAGGG 58.498 60.000 0.00 0.00 41.22 4.30
574 575 1.501582 CAAAGAGGAGGGTAGAGGGG 58.498 60.000 0.00 0.00 0.00 4.79
575 576 1.102938 AAAGAGGAGGGTAGAGGGGT 58.897 55.000 0.00 0.00 0.00 4.95
576 577 0.340208 AAGAGGAGGGTAGAGGGGTG 59.660 60.000 0.00 0.00 0.00 4.61
577 578 1.075151 GAGGAGGGTAGAGGGGTGG 60.075 68.421 0.00 0.00 0.00 4.61
578 579 2.768769 GGAGGGTAGAGGGGTGGC 60.769 72.222 0.00 0.00 0.00 5.01
579 580 3.155167 GAGGGTAGAGGGGTGGCG 61.155 72.222 0.00 0.00 0.00 5.69
580 581 4.798682 AGGGTAGAGGGGTGGCGG 62.799 72.222 0.00 0.00 0.00 6.13
582 583 2.042639 GGTAGAGGGGTGGCGGTA 60.043 66.667 0.00 0.00 0.00 4.02
583 584 2.132352 GGTAGAGGGGTGGCGGTAG 61.132 68.421 0.00 0.00 0.00 3.18
584 585 2.132352 GTAGAGGGGTGGCGGTAGG 61.132 68.421 0.00 0.00 0.00 3.18
585 586 3.384555 TAGAGGGGTGGCGGTAGGG 62.385 68.421 0.00 0.00 0.00 3.53
605 606 2.034179 GGTTTGTTGGGCTGTGTCTTAC 59.966 50.000 0.00 0.00 0.00 2.34
1466 1476 9.601217 GGATAGAGTAAATGAGCTAAAACAAGA 57.399 33.333 0.00 0.00 0.00 3.02
1738 1748 2.104963 AGGTTGAAGTTGACCAGGACTC 59.895 50.000 0.00 0.00 38.42 3.36
1911 1921 1.133231 GGATACCGGGGAGTTAGAGGT 60.133 57.143 6.32 0.00 38.86 3.85
2944 2955 9.979578 AACTGAATATGTAAACAAGCAATTTGA 57.020 25.926 0.00 0.00 39.21 2.69
3030 3041 3.513515 TGGTGTTGCAGAAAGGAAAAACT 59.486 39.130 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.204359 GTGCAGTTCTTTTAGCATGGATATG 58.796 40.000 0.00 0.00 39.43 1.78
1 2 5.300286 GGTGCAGTTCTTTTAGCATGGATAT 59.700 40.000 0.00 0.00 39.43 1.63
2 3 4.640201 GGTGCAGTTCTTTTAGCATGGATA 59.360 41.667 0.00 0.00 39.43 2.59
3 4 3.445096 GGTGCAGTTCTTTTAGCATGGAT 59.555 43.478 0.00 0.00 39.43 3.41
4 5 2.819608 GGTGCAGTTCTTTTAGCATGGA 59.180 45.455 0.00 0.00 39.43 3.41
5 6 2.821969 AGGTGCAGTTCTTTTAGCATGG 59.178 45.455 0.00 0.00 39.43 3.66
6 7 4.697352 ACTAGGTGCAGTTCTTTTAGCATG 59.303 41.667 0.00 0.00 39.43 4.06
7 8 4.911390 ACTAGGTGCAGTTCTTTTAGCAT 58.089 39.130 0.00 0.00 39.43 3.79
8 9 4.351874 ACTAGGTGCAGTTCTTTTAGCA 57.648 40.909 0.00 0.00 34.10 3.49
9 10 4.613850 GCAACTAGGTGCAGTTCTTTTAGC 60.614 45.833 27.84 0.00 44.29 3.09
10 11 5.035784 GCAACTAGGTGCAGTTCTTTTAG 57.964 43.478 27.84 0.00 44.29 1.85
12 13 3.990318 GCAACTAGGTGCAGTTCTTTT 57.010 42.857 27.84 0.00 44.29 2.27
20 21 6.652316 CAGAGATCTGTGCAACTAGGTGCA 62.652 50.000 31.31 31.31 42.51 4.57
21 22 2.093764 AGAGATCTGTGCAACTAGGTGC 60.094 50.000 26.22 26.22 45.15 5.01
22 23 3.519579 CAGAGATCTGTGCAACTAGGTG 58.480 50.000 6.97 2.45 39.09 4.00
23 24 2.499289 CCAGAGATCTGTGCAACTAGGT 59.501 50.000 14.31 0.00 42.27 3.08
24 25 2.762887 TCCAGAGATCTGTGCAACTAGG 59.237 50.000 14.31 0.00 42.27 3.02
25 26 4.462508 TTCCAGAGATCTGTGCAACTAG 57.537 45.455 14.31 0.09 42.27 2.57
26 27 4.890158 TTTCCAGAGATCTGTGCAACTA 57.110 40.909 14.31 0.00 42.27 2.24
27 28 3.777106 TTTCCAGAGATCTGTGCAACT 57.223 42.857 14.31 0.00 42.27 3.16
28 29 4.067896 TCTTTTCCAGAGATCTGTGCAAC 58.932 43.478 14.31 0.00 42.27 4.17
29 30 4.356405 TCTTTTCCAGAGATCTGTGCAA 57.644 40.909 14.31 2.92 42.27 4.08
30 31 4.356405 TTCTTTTCCAGAGATCTGTGCA 57.644 40.909 14.31 0.00 42.27 4.57
31 32 4.759183 ACTTTCTTTTCCAGAGATCTGTGC 59.241 41.667 14.31 0.00 42.27 4.57
32 33 6.091986 GCTACTTTCTTTTCCAGAGATCTGTG 59.908 42.308 12.86 12.86 42.27 3.66
33 34 6.169800 GCTACTTTCTTTTCCAGAGATCTGT 58.830 40.000 0.00 0.00 42.27 3.41
34 35 5.290643 CGCTACTTTCTTTTCCAGAGATCTG 59.709 44.000 0.00 2.72 43.40 2.90
35 36 5.186021 TCGCTACTTTCTTTTCCAGAGATCT 59.814 40.000 0.00 0.00 31.12 2.75
36 37 5.411781 TCGCTACTTTCTTTTCCAGAGATC 58.588 41.667 0.00 0.00 31.12 2.75
37 38 5.407407 TCGCTACTTTCTTTTCCAGAGAT 57.593 39.130 0.00 0.00 31.12 2.75
38 39 4.866508 TCGCTACTTTCTTTTCCAGAGA 57.133 40.909 0.00 0.00 31.12 3.10
39 40 5.171476 TCATCGCTACTTTCTTTTCCAGAG 58.829 41.667 0.00 0.00 31.12 3.35
40 41 5.147330 TCATCGCTACTTTCTTTTCCAGA 57.853 39.130 0.00 0.00 0.00 3.86
41 42 5.582269 TCATCATCGCTACTTTCTTTTCCAG 59.418 40.000 0.00 0.00 0.00 3.86
42 43 5.487433 TCATCATCGCTACTTTCTTTTCCA 58.513 37.500 0.00 0.00 0.00 3.53
43 44 6.037610 ACATCATCATCGCTACTTTCTTTTCC 59.962 38.462 0.00 0.00 0.00 3.13
44 45 7.009568 ACATCATCATCGCTACTTTCTTTTC 57.990 36.000 0.00 0.00 0.00 2.29
45 46 6.992063 ACATCATCATCGCTACTTTCTTTT 57.008 33.333 0.00 0.00 0.00 2.27
46 47 6.992063 AACATCATCATCGCTACTTTCTTT 57.008 33.333 0.00 0.00 0.00 2.52
47 48 6.820656 AGAAACATCATCATCGCTACTTTCTT 59.179 34.615 0.00 0.00 0.00 2.52
48 49 6.344500 AGAAACATCATCATCGCTACTTTCT 58.656 36.000 0.00 0.00 0.00 2.52
49 50 6.595772 AGAAACATCATCATCGCTACTTTC 57.404 37.500 0.00 0.00 0.00 2.62
50 51 7.492524 TCTAGAAACATCATCATCGCTACTTT 58.507 34.615 0.00 0.00 0.00 2.66
51 52 7.013750 TCTCTAGAAACATCATCATCGCTACTT 59.986 37.037 0.00 0.00 0.00 2.24
52 53 6.488344 TCTCTAGAAACATCATCATCGCTACT 59.512 38.462 0.00 0.00 0.00 2.57
53 54 6.673106 TCTCTAGAAACATCATCATCGCTAC 58.327 40.000 0.00 0.00 0.00 3.58
54 55 6.884280 TCTCTAGAAACATCATCATCGCTA 57.116 37.500 0.00 0.00 0.00 4.26
55 56 5.781210 TCTCTAGAAACATCATCATCGCT 57.219 39.130 0.00 0.00 0.00 4.93
56 57 5.163972 GCATCTCTAGAAACATCATCATCGC 60.164 44.000 0.00 0.00 0.00 4.58
57 58 5.924825 TGCATCTCTAGAAACATCATCATCG 59.075 40.000 0.00 0.00 0.00 3.84
58 59 6.147492 GGTGCATCTCTAGAAACATCATCATC 59.853 42.308 0.00 0.00 0.00 2.92
59 60 5.996513 GGTGCATCTCTAGAAACATCATCAT 59.003 40.000 0.00 0.00 0.00 2.45
60 61 5.363101 GGTGCATCTCTAGAAACATCATCA 58.637 41.667 0.00 0.00 0.00 3.07
61 62 4.447054 CGGTGCATCTCTAGAAACATCATC 59.553 45.833 0.00 0.00 0.00 2.92
62 63 4.100035 TCGGTGCATCTCTAGAAACATCAT 59.900 41.667 0.00 0.00 0.00 2.45
63 64 3.447229 TCGGTGCATCTCTAGAAACATCA 59.553 43.478 0.00 0.00 0.00 3.07
64 65 4.046938 TCGGTGCATCTCTAGAAACATC 57.953 45.455 0.00 0.00 0.00 3.06
65 66 4.679373 ATCGGTGCATCTCTAGAAACAT 57.321 40.909 0.00 0.00 0.00 2.71
66 67 4.471904 AATCGGTGCATCTCTAGAAACA 57.528 40.909 0.00 0.00 0.00 2.83
67 68 5.688176 GTCTAATCGGTGCATCTCTAGAAAC 59.312 44.000 0.00 0.00 0.00 2.78
68 69 5.594725 AGTCTAATCGGTGCATCTCTAGAAA 59.405 40.000 0.00 0.00 0.00 2.52
69 70 5.133941 AGTCTAATCGGTGCATCTCTAGAA 58.866 41.667 0.00 0.00 0.00 2.10
70 71 4.720046 AGTCTAATCGGTGCATCTCTAGA 58.280 43.478 0.00 0.00 0.00 2.43
71 72 5.446143 AAGTCTAATCGGTGCATCTCTAG 57.554 43.478 0.00 0.00 0.00 2.43
72 73 5.854010 AAAGTCTAATCGGTGCATCTCTA 57.146 39.130 0.00 0.00 0.00 2.43
73 74 4.744795 AAAGTCTAATCGGTGCATCTCT 57.255 40.909 0.00 0.00 0.00 3.10
74 75 4.631813 ACAAAAGTCTAATCGGTGCATCTC 59.368 41.667 0.00 0.00 0.00 2.75
75 76 4.579869 ACAAAAGTCTAATCGGTGCATCT 58.420 39.130 0.00 0.00 0.00 2.90
76 77 4.946784 ACAAAAGTCTAATCGGTGCATC 57.053 40.909 0.00 0.00 0.00 3.91
77 78 4.615912 GCAACAAAAGTCTAATCGGTGCAT 60.616 41.667 0.00 0.00 0.00 3.96
78 79 3.304391 GCAACAAAAGTCTAATCGGTGCA 60.304 43.478 0.00 0.00 0.00 4.57
79 80 3.058224 AGCAACAAAAGTCTAATCGGTGC 60.058 43.478 0.00 0.00 0.00 5.01
80 81 4.749245 AGCAACAAAAGTCTAATCGGTG 57.251 40.909 0.00 0.00 0.00 4.94
81 82 4.819630 TGAAGCAACAAAAGTCTAATCGGT 59.180 37.500 0.00 0.00 0.00 4.69
82 83 5.356882 TGAAGCAACAAAAGTCTAATCGG 57.643 39.130 0.00 0.00 0.00 4.18
83 84 9.559958 AAATATGAAGCAACAAAAGTCTAATCG 57.440 29.630 0.00 0.00 0.00 3.34
86 87 9.474920 CCAAAATATGAAGCAACAAAAGTCTAA 57.525 29.630 0.00 0.00 0.00 2.10
87 88 7.598493 GCCAAAATATGAAGCAACAAAAGTCTA 59.402 33.333 0.00 0.00 0.00 2.59
88 89 6.424812 GCCAAAATATGAAGCAACAAAAGTCT 59.575 34.615 0.00 0.00 0.00 3.24
89 90 6.593072 GCCAAAATATGAAGCAACAAAAGTC 58.407 36.000 0.00 0.00 0.00 3.01
90 91 5.177327 CGCCAAAATATGAAGCAACAAAAGT 59.823 36.000 0.00 0.00 0.00 2.66
91 92 5.404968 TCGCCAAAATATGAAGCAACAAAAG 59.595 36.000 0.00 0.00 0.00 2.27
92 93 5.292765 TCGCCAAAATATGAAGCAACAAAA 58.707 33.333 0.00 0.00 0.00 2.44
93 94 4.876125 TCGCCAAAATATGAAGCAACAAA 58.124 34.783 0.00 0.00 0.00 2.83
94 95 4.511617 TCGCCAAAATATGAAGCAACAA 57.488 36.364 0.00 0.00 0.00 2.83
95 96 4.717233 ATCGCCAAAATATGAAGCAACA 57.283 36.364 0.00 0.00 0.00 3.33
96 97 5.687285 CCTTATCGCCAAAATATGAAGCAAC 59.313 40.000 0.00 0.00 0.00 4.17
97 98 5.221224 CCCTTATCGCCAAAATATGAAGCAA 60.221 40.000 0.00 0.00 0.00 3.91
98 99 4.278170 CCCTTATCGCCAAAATATGAAGCA 59.722 41.667 0.00 0.00 0.00 3.91
99 100 4.321230 CCCCTTATCGCCAAAATATGAAGC 60.321 45.833 0.00 0.00 0.00 3.86
100 101 5.070001 TCCCCTTATCGCCAAAATATGAAG 58.930 41.667 0.00 0.00 0.00 3.02
101 102 5.055265 TCCCCTTATCGCCAAAATATGAA 57.945 39.130 0.00 0.00 0.00 2.57
102 103 4.715534 TCCCCTTATCGCCAAAATATGA 57.284 40.909 0.00 0.00 0.00 2.15
103 104 5.982890 ATTCCCCTTATCGCCAAAATATG 57.017 39.130 0.00 0.00 0.00 1.78
104 105 6.994421 AAATTCCCCTTATCGCCAAAATAT 57.006 33.333 0.00 0.00 0.00 1.28
105 106 6.155393 ACAAAATTCCCCTTATCGCCAAAATA 59.845 34.615 0.00 0.00 0.00 1.40
106 107 5.045942 ACAAAATTCCCCTTATCGCCAAAAT 60.046 36.000 0.00 0.00 0.00 1.82
107 108 4.284746 ACAAAATTCCCCTTATCGCCAAAA 59.715 37.500 0.00 0.00 0.00 2.44
108 109 3.835395 ACAAAATTCCCCTTATCGCCAAA 59.165 39.130 0.00 0.00 0.00 3.28
109 110 3.194542 CACAAAATTCCCCTTATCGCCAA 59.805 43.478 0.00 0.00 0.00 4.52
110 111 2.757868 CACAAAATTCCCCTTATCGCCA 59.242 45.455 0.00 0.00 0.00 5.69
111 112 2.758423 ACACAAAATTCCCCTTATCGCC 59.242 45.455 0.00 0.00 0.00 5.54
112 113 4.201980 GGTACACAAAATTCCCCTTATCGC 60.202 45.833 0.00 0.00 0.00 4.58
113 114 4.337274 GGGTACACAAAATTCCCCTTATCG 59.663 45.833 0.00 0.00 32.66 2.92
114 115 5.847111 GGGTACACAAAATTCCCCTTATC 57.153 43.478 0.00 0.00 32.66 1.75
120 121 4.345547 TCTTTTGGGGTACACAAAATTCCC 59.654 41.667 20.80 9.56 44.13 3.97
121 122 5.294356 GTCTTTTGGGGTACACAAAATTCC 58.706 41.667 20.80 12.05 44.13 3.01
122 123 5.163395 TGGTCTTTTGGGGTACACAAAATTC 60.163 40.000 20.80 16.97 44.13 2.17
123 124 4.717280 TGGTCTTTTGGGGTACACAAAATT 59.283 37.500 20.80 0.00 44.13 1.82
124 125 4.290942 TGGTCTTTTGGGGTACACAAAAT 58.709 39.130 20.80 0.00 44.13 1.82
125 126 3.709587 TGGTCTTTTGGGGTACACAAAA 58.290 40.909 19.88 19.88 43.30 2.44
126 127 3.383698 TGGTCTTTTGGGGTACACAAA 57.616 42.857 9.96 9.96 36.15 2.83
127 128 3.292460 CTTGGTCTTTTGGGGTACACAA 58.708 45.455 0.00 0.00 0.00 3.33
128 129 2.423660 CCTTGGTCTTTTGGGGTACACA 60.424 50.000 0.00 0.00 0.00 3.72
129 130 2.235891 CCTTGGTCTTTTGGGGTACAC 58.764 52.381 0.00 0.00 0.00 2.90
130 131 1.479757 GCCTTGGTCTTTTGGGGTACA 60.480 52.381 0.00 0.00 0.00 2.90
131 132 1.254026 GCCTTGGTCTTTTGGGGTAC 58.746 55.000 0.00 0.00 0.00 3.34
132 133 0.854218 TGCCTTGGTCTTTTGGGGTA 59.146 50.000 0.00 0.00 0.00 3.69
133 134 0.469892 CTGCCTTGGTCTTTTGGGGT 60.470 55.000 0.00 0.00 0.00 4.95
134 135 0.469892 ACTGCCTTGGTCTTTTGGGG 60.470 55.000 0.00 0.00 0.00 4.96
135 136 0.961753 GACTGCCTTGGTCTTTTGGG 59.038 55.000 0.00 0.00 0.00 4.12
136 137 1.610522 CAGACTGCCTTGGTCTTTTGG 59.389 52.381 0.00 0.00 41.45 3.28
137 138 1.610522 CCAGACTGCCTTGGTCTTTTG 59.389 52.381 0.00 0.00 41.45 2.44
138 139 1.479389 CCCAGACTGCCTTGGTCTTTT 60.479 52.381 0.00 0.00 41.45 2.27
139 140 0.111253 CCCAGACTGCCTTGGTCTTT 59.889 55.000 0.00 0.00 41.45 2.52
140 141 1.763770 CCCAGACTGCCTTGGTCTT 59.236 57.895 0.00 0.00 41.45 3.01
141 142 2.900106 GCCCAGACTGCCTTGGTCT 61.900 63.158 0.00 0.00 43.81 3.85
142 143 2.360475 GCCCAGACTGCCTTGGTC 60.360 66.667 0.00 0.00 30.62 4.02
143 144 2.541907 ATGCCCAGACTGCCTTGGT 61.542 57.895 0.00 0.00 30.62 3.67
144 145 2.050350 CATGCCCAGACTGCCTTGG 61.050 63.158 0.00 0.00 0.00 3.61
145 146 2.707849 GCATGCCCAGACTGCCTTG 61.708 63.158 6.36 0.58 0.00 3.61
146 147 2.362120 GCATGCCCAGACTGCCTT 60.362 61.111 6.36 0.00 0.00 4.35
147 148 3.214190 TTGCATGCCCAGACTGCCT 62.214 57.895 16.68 0.00 35.02 4.75
148 149 2.677524 TTGCATGCCCAGACTGCC 60.678 61.111 16.68 0.00 35.02 4.85
149 150 1.035932 ATCTTGCATGCCCAGACTGC 61.036 55.000 16.68 0.00 36.45 4.40
150 151 1.471119 AATCTTGCATGCCCAGACTG 58.529 50.000 16.68 0.00 0.00 3.51
151 152 2.226962 AAATCTTGCATGCCCAGACT 57.773 45.000 16.68 3.48 0.00 3.24
152 153 3.282021 TCTAAATCTTGCATGCCCAGAC 58.718 45.455 16.68 0.00 0.00 3.51
153 154 3.650281 TCTAAATCTTGCATGCCCAGA 57.350 42.857 16.68 16.71 0.00 3.86
154 155 3.635373 ACATCTAAATCTTGCATGCCCAG 59.365 43.478 16.68 11.47 0.00 4.45
155 156 3.634504 ACATCTAAATCTTGCATGCCCA 58.365 40.909 16.68 0.10 0.00 5.36
156 157 4.098349 TGAACATCTAAATCTTGCATGCCC 59.902 41.667 16.68 0.00 0.00 5.36
157 158 5.252969 TGAACATCTAAATCTTGCATGCC 57.747 39.130 16.68 0.00 0.00 4.40
158 159 7.585286 TTTTGAACATCTAAATCTTGCATGC 57.415 32.000 11.82 11.82 0.00 4.06
168 169 9.656040 AGCATGCATTTATTTTGAACATCTAAA 57.344 25.926 21.98 0.00 0.00 1.85
169 170 9.656040 AAGCATGCATTTATTTTGAACATCTAA 57.344 25.926 21.98 0.00 0.00 2.10
171 172 9.309516 CTAAGCATGCATTTATTTTGAACATCT 57.690 29.630 21.98 0.00 0.00 2.90
172 173 9.090692 ACTAAGCATGCATTTATTTTGAACATC 57.909 29.630 21.98 0.00 0.00 3.06
174 175 9.920133 TTACTAAGCATGCATTTATTTTGAACA 57.080 25.926 21.98 0.00 0.00 3.18
179 180 8.829612 GCCATTTACTAAGCATGCATTTATTTT 58.170 29.630 21.98 5.87 0.00 1.82
180 181 8.206189 AGCCATTTACTAAGCATGCATTTATTT 58.794 29.630 21.98 6.65 0.00 1.40
181 182 7.654520 CAGCCATTTACTAAGCATGCATTTATT 59.345 33.333 21.98 7.44 0.00 1.40
182 183 7.149973 CAGCCATTTACTAAGCATGCATTTAT 58.850 34.615 21.98 3.53 0.00 1.40
183 184 6.096705 ACAGCCATTTACTAAGCATGCATTTA 59.903 34.615 21.98 9.79 0.00 1.40
184 185 5.105228 ACAGCCATTTACTAAGCATGCATTT 60.105 36.000 21.98 9.05 0.00 2.32
185 186 4.403432 ACAGCCATTTACTAAGCATGCATT 59.597 37.500 21.98 13.44 0.00 3.56
186 187 3.956199 ACAGCCATTTACTAAGCATGCAT 59.044 39.130 21.98 11.22 0.00 3.96
187 188 3.129113 CACAGCCATTTACTAAGCATGCA 59.871 43.478 21.98 0.00 0.00 3.96
188 189 3.129287 ACACAGCCATTTACTAAGCATGC 59.871 43.478 10.51 10.51 0.00 4.06
189 190 4.970662 ACACAGCCATTTACTAAGCATG 57.029 40.909 0.00 0.00 0.00 4.06
190 191 7.645058 ATTTACACAGCCATTTACTAAGCAT 57.355 32.000 0.00 0.00 0.00 3.79
191 192 7.312154 CAATTTACACAGCCATTTACTAAGCA 58.688 34.615 0.00 0.00 0.00 3.91
192 193 6.253512 GCAATTTACACAGCCATTTACTAAGC 59.746 38.462 0.00 0.00 0.00 3.09
193 194 7.538575 AGCAATTTACACAGCCATTTACTAAG 58.461 34.615 0.00 0.00 0.00 2.18
194 195 7.461182 AGCAATTTACACAGCCATTTACTAA 57.539 32.000 0.00 0.00 0.00 2.24
195 196 7.362574 GGAAGCAATTTACACAGCCATTTACTA 60.363 37.037 0.00 0.00 0.00 1.82
196 197 5.982890 AGCAATTTACACAGCCATTTACT 57.017 34.783 0.00 0.00 0.00 2.24
197 198 5.576774 GGAAGCAATTTACACAGCCATTTAC 59.423 40.000 0.00 0.00 0.00 2.01
198 199 5.244851 TGGAAGCAATTTACACAGCCATTTA 59.755 36.000 0.00 0.00 0.00 1.40
199 200 4.040217 TGGAAGCAATTTACACAGCCATTT 59.960 37.500 0.00 0.00 0.00 2.32
200 201 3.577848 TGGAAGCAATTTACACAGCCATT 59.422 39.130 0.00 0.00 0.00 3.16
201 202 3.164268 TGGAAGCAATTTACACAGCCAT 58.836 40.909 0.00 0.00 0.00 4.40
202 203 2.557924 CTGGAAGCAATTTACACAGCCA 59.442 45.455 0.00 0.00 0.00 4.75
203 204 2.819608 TCTGGAAGCAATTTACACAGCC 59.180 45.455 0.00 0.00 0.00 4.85
204 205 3.753272 TCTCTGGAAGCAATTTACACAGC 59.247 43.478 0.00 0.00 0.00 4.40
205 206 5.947228 TTCTCTGGAAGCAATTTACACAG 57.053 39.130 0.00 0.00 0.00 3.66
206 207 6.258230 CATTCTCTGGAAGCAATTTACACA 57.742 37.500 0.00 0.00 34.70 3.72
220 221 1.264749 TGACGGACCCCATTCTCTGG 61.265 60.000 0.00 0.00 45.51 3.86
221 222 0.613260 TTGACGGACCCCATTCTCTG 59.387 55.000 0.00 0.00 0.00 3.35
222 223 1.358152 TTTGACGGACCCCATTCTCT 58.642 50.000 0.00 0.00 0.00 3.10
223 224 2.289565 GATTTGACGGACCCCATTCTC 58.710 52.381 0.00 0.00 0.00 2.87
224 225 1.406887 CGATTTGACGGACCCCATTCT 60.407 52.381 0.00 0.00 0.00 2.40
225 226 1.014352 CGATTTGACGGACCCCATTC 58.986 55.000 0.00 0.00 0.00 2.67
226 227 1.029947 GCGATTTGACGGACCCCATT 61.030 55.000 0.00 0.00 0.00 3.16
227 228 1.451387 GCGATTTGACGGACCCCAT 60.451 57.895 0.00 0.00 0.00 4.00
228 229 2.046700 GCGATTTGACGGACCCCA 60.047 61.111 0.00 0.00 0.00 4.96
229 230 1.366854 GAAGCGATTTGACGGACCCC 61.367 60.000 0.00 0.00 0.00 4.95
230 231 0.391263 AGAAGCGATTTGACGGACCC 60.391 55.000 0.00 0.00 0.00 4.46
231 232 1.393883 GAAGAAGCGATTTGACGGACC 59.606 52.381 0.00 0.00 0.00 4.46
232 233 2.066262 TGAAGAAGCGATTTGACGGAC 58.934 47.619 0.00 0.00 0.00 4.79
233 234 2.029380 TCTGAAGAAGCGATTTGACGGA 60.029 45.455 0.00 0.00 0.00 4.69
234 235 2.337583 TCTGAAGAAGCGATTTGACGG 58.662 47.619 0.00 0.00 0.00 4.79
235 236 3.184379 TGTTCTGAAGAAGCGATTTGACG 59.816 43.478 0.00 0.00 34.27 4.35
236 237 4.732285 TGTTCTGAAGAAGCGATTTGAC 57.268 40.909 0.00 0.00 34.27 3.18
237 238 5.749596 TTTGTTCTGAAGAAGCGATTTGA 57.250 34.783 0.13 0.00 34.27 2.69
238 239 7.301054 AGTATTTGTTCTGAAGAAGCGATTTG 58.699 34.615 0.13 0.00 34.27 2.32
239 240 7.440523 AGTATTTGTTCTGAAGAAGCGATTT 57.559 32.000 0.13 0.00 34.27 2.17
240 241 7.041098 ACAAGTATTTGTTCTGAAGAAGCGATT 60.041 33.333 0.00 0.00 45.01 3.34
241 242 6.428159 ACAAGTATTTGTTCTGAAGAAGCGAT 59.572 34.615 0.00 0.00 45.01 4.58
242 243 5.758296 ACAAGTATTTGTTCTGAAGAAGCGA 59.242 36.000 0.00 0.00 45.01 4.93
243 244 5.990408 ACAAGTATTTGTTCTGAAGAAGCG 58.010 37.500 0.00 0.00 45.01 4.68
244 245 8.224437 GTCTACAAGTATTTGTTCTGAAGAAGC 58.776 37.037 9.05 0.00 45.01 3.86
245 246 8.713271 GGTCTACAAGTATTTGTTCTGAAGAAG 58.287 37.037 9.05 0.00 45.01 2.85
246 247 7.660208 GGGTCTACAAGTATTTGTTCTGAAGAA 59.340 37.037 9.05 0.00 45.01 2.52
247 248 7.159372 GGGTCTACAAGTATTTGTTCTGAAGA 58.841 38.462 9.05 2.99 45.01 2.87
248 249 6.371825 GGGGTCTACAAGTATTTGTTCTGAAG 59.628 42.308 9.05 0.60 45.01 3.02
249 250 6.183361 TGGGGTCTACAAGTATTTGTTCTGAA 60.183 38.462 9.05 0.00 45.01 3.02
250 251 5.308497 TGGGGTCTACAAGTATTTGTTCTGA 59.692 40.000 9.05 3.53 45.01 3.27
251 252 5.556915 TGGGGTCTACAAGTATTTGTTCTG 58.443 41.667 9.05 1.33 45.01 3.02
252 253 5.836024 TGGGGTCTACAAGTATTTGTTCT 57.164 39.130 9.05 0.00 45.01 3.01
253 254 5.589050 GGATGGGGTCTACAAGTATTTGTTC 59.411 44.000 9.05 0.00 45.01 3.18
254 255 5.014755 TGGATGGGGTCTACAAGTATTTGTT 59.985 40.000 9.05 0.00 45.01 2.83
256 257 5.110814 TGGATGGGGTCTACAAGTATTTG 57.889 43.478 0.00 0.00 40.24 2.32
257 258 5.253096 AGTTGGATGGGGTCTACAAGTATTT 59.747 40.000 0.00 0.00 0.00 1.40
258 259 4.788617 AGTTGGATGGGGTCTACAAGTATT 59.211 41.667 0.00 0.00 0.00 1.89
259 260 4.371681 AGTTGGATGGGGTCTACAAGTAT 58.628 43.478 0.00 0.00 0.00 2.12
260 261 3.773119 GAGTTGGATGGGGTCTACAAGTA 59.227 47.826 0.00 0.00 0.00 2.24
261 262 2.572104 GAGTTGGATGGGGTCTACAAGT 59.428 50.000 0.00 0.00 0.00 3.16
262 263 2.840651 AGAGTTGGATGGGGTCTACAAG 59.159 50.000 0.00 0.00 0.00 3.16
263 264 2.915869 AGAGTTGGATGGGGTCTACAA 58.084 47.619 0.00 0.00 0.00 2.41
264 265 2.642171 AGAGTTGGATGGGGTCTACA 57.358 50.000 0.00 0.00 0.00 2.74
265 266 5.839606 AGTATAAGAGTTGGATGGGGTCTAC 59.160 44.000 0.00 0.00 0.00 2.59
266 267 6.039415 AGTATAAGAGTTGGATGGGGTCTA 57.961 41.667 0.00 0.00 0.00 2.59
267 268 4.897051 AGTATAAGAGTTGGATGGGGTCT 58.103 43.478 0.00 0.00 0.00 3.85
268 269 4.040584 GGAGTATAAGAGTTGGATGGGGTC 59.959 50.000 0.00 0.00 0.00 4.46
269 270 3.974642 GGAGTATAAGAGTTGGATGGGGT 59.025 47.826 0.00 0.00 0.00 4.95
270 271 3.973973 TGGAGTATAAGAGTTGGATGGGG 59.026 47.826 0.00 0.00 0.00 4.96
271 272 5.832539 ATGGAGTATAAGAGTTGGATGGG 57.167 43.478 0.00 0.00 0.00 4.00
272 273 6.595682 ACAATGGAGTATAAGAGTTGGATGG 58.404 40.000 0.00 0.00 0.00 3.51
273 274 9.784531 ATTACAATGGAGTATAAGAGTTGGATG 57.215 33.333 0.00 0.00 0.00 3.51
299 300 9.946165 CACTTACAGTGTATCGATATTGAGTTA 57.054 33.333 8.66 0.02 41.19 2.24
300 301 8.858003 CACTTACAGTGTATCGATATTGAGTT 57.142 34.615 8.66 0.00 41.19 3.01
305 306 8.459635 ATATCGCACTTACAGTGTATCGATATT 58.540 33.333 24.94 17.26 46.79 1.28
306 307 7.986562 ATATCGCACTTACAGTGTATCGATAT 58.013 34.615 24.94 24.94 45.49 1.63
316 317 7.762588 AATAGTCCTATATCGCACTTACAGT 57.237 36.000 0.00 0.00 0.00 3.55
317 318 8.182881 GGTAATAGTCCTATATCGCACTTACAG 58.817 40.741 0.00 0.00 0.00 2.74
318 319 7.121759 GGGTAATAGTCCTATATCGCACTTACA 59.878 40.741 0.00 0.00 0.00 2.41
319 320 7.121759 TGGGTAATAGTCCTATATCGCACTTAC 59.878 40.741 0.00 0.00 0.00 2.34
320 321 7.177184 TGGGTAATAGTCCTATATCGCACTTA 58.823 38.462 0.00 0.00 0.00 2.24
321 322 6.014647 TGGGTAATAGTCCTATATCGCACTT 58.985 40.000 0.00 0.00 0.00 3.16
322 323 5.577100 TGGGTAATAGTCCTATATCGCACT 58.423 41.667 0.00 0.00 0.00 4.40
323 324 5.909621 TGGGTAATAGTCCTATATCGCAC 57.090 43.478 0.00 0.00 0.00 5.34
324 325 5.955959 ACATGGGTAATAGTCCTATATCGCA 59.044 40.000 0.00 9.19 0.00 5.10
325 326 6.466885 ACATGGGTAATAGTCCTATATCGC 57.533 41.667 0.00 0.00 0.00 4.58
326 327 6.238676 CCGACATGGGTAATAGTCCTATATCG 60.239 46.154 0.00 2.85 40.65 2.92
327 328 7.040473 CCGACATGGGTAATAGTCCTATATC 57.960 44.000 0.00 0.00 0.00 1.63
343 344 2.124570 CTTCAGCCCCCGACATGG 60.125 66.667 0.00 0.00 37.55 3.66
344 345 2.825836 GCTTCAGCCCCCGACATG 60.826 66.667 0.00 0.00 34.31 3.21
345 346 3.011517 AGCTTCAGCCCCCGACAT 61.012 61.111 0.00 0.00 43.38 3.06
346 347 4.020617 CAGCTTCAGCCCCCGACA 62.021 66.667 0.00 0.00 43.38 4.35
347 348 4.785453 CCAGCTTCAGCCCCCGAC 62.785 72.222 0.00 0.00 43.38 4.79
350 351 3.224007 TTTCCCAGCTTCAGCCCCC 62.224 63.158 0.00 0.00 43.38 5.40
351 352 1.979155 GTTTCCCAGCTTCAGCCCC 60.979 63.158 0.00 0.00 43.38 5.80
352 353 1.979155 GGTTTCCCAGCTTCAGCCC 60.979 63.158 0.00 0.00 43.38 5.19
353 354 0.962855 GAGGTTTCCCAGCTTCAGCC 60.963 60.000 0.00 0.00 43.38 4.85
354 355 0.962855 GGAGGTTTCCCAGCTTCAGC 60.963 60.000 0.00 0.00 37.53 4.26
355 356 0.401738 TGGAGGTTTCCCAGCTTCAG 59.598 55.000 0.00 0.00 43.33 3.02
356 357 1.075601 ATGGAGGTTTCCCAGCTTCA 58.924 50.000 0.00 0.00 43.03 3.02
357 358 3.584733 ATATGGAGGTTTCCCAGCTTC 57.415 47.619 0.00 0.00 43.33 3.86
358 359 4.916424 AGATATATGGAGGTTTCCCAGCTT 59.084 41.667 0.00 0.00 43.33 3.74
359 360 4.507342 AGATATATGGAGGTTTCCCAGCT 58.493 43.478 0.00 0.00 43.33 4.24
360 361 4.534103 AGAGATATATGGAGGTTTCCCAGC 59.466 45.833 0.00 0.00 43.33 4.85
361 362 6.694445 AAGAGATATATGGAGGTTTCCCAG 57.306 41.667 0.00 0.00 43.33 4.45
362 363 7.091993 ACAAAAGAGATATATGGAGGTTTCCCA 60.092 37.037 0.00 0.00 43.33 4.37
363 364 7.290813 ACAAAAGAGATATATGGAGGTTTCCC 58.709 38.462 0.00 0.00 43.33 3.97
364 365 8.214364 AGACAAAAGAGATATATGGAGGTTTCC 58.786 37.037 0.00 0.00 44.31 3.13
365 366 9.267084 GAGACAAAAGAGATATATGGAGGTTTC 57.733 37.037 0.00 0.00 0.00 2.78
366 367 8.214364 GGAGACAAAAGAGATATATGGAGGTTT 58.786 37.037 0.00 0.00 0.00 3.27
367 368 7.472100 CGGAGACAAAAGAGATATATGGAGGTT 60.472 40.741 0.00 0.00 0.00 3.50
368 369 6.015010 CGGAGACAAAAGAGATATATGGAGGT 60.015 42.308 0.00 0.00 0.00 3.85
369 370 6.209589 TCGGAGACAAAAGAGATATATGGAGG 59.790 42.308 0.00 0.00 0.00 4.30
370 371 7.220741 TCGGAGACAAAAGAGATATATGGAG 57.779 40.000 0.00 0.00 0.00 3.86
388 389 1.103803 CGAGGGAATCTTGTCGGAGA 58.896 55.000 0.00 0.00 0.00 3.71
389 390 1.066303 CTCGAGGGAATCTTGTCGGAG 59.934 57.143 3.91 0.00 33.21 4.63
390 391 1.103803 CTCGAGGGAATCTTGTCGGA 58.896 55.000 3.91 0.00 33.21 4.55
391 392 0.528684 GCTCGAGGGAATCTTGTCGG 60.529 60.000 15.58 0.00 33.21 4.79
392 393 0.457851 AGCTCGAGGGAATCTTGTCG 59.542 55.000 15.58 0.00 0.00 4.35
393 394 1.754226 AGAGCTCGAGGGAATCTTGTC 59.246 52.381 15.58 0.00 0.00 3.18
394 395 1.480137 CAGAGCTCGAGGGAATCTTGT 59.520 52.381 15.58 0.00 0.00 3.16
395 396 1.753649 TCAGAGCTCGAGGGAATCTTG 59.246 52.381 15.58 0.00 0.00 3.02
396 397 2.151502 TCAGAGCTCGAGGGAATCTT 57.848 50.000 15.58 0.00 0.00 2.40
397 398 1.754226 GTTCAGAGCTCGAGGGAATCT 59.246 52.381 15.58 1.34 0.00 2.40
398 399 1.754226 AGTTCAGAGCTCGAGGGAATC 59.246 52.381 15.58 0.00 0.00 2.52
399 400 1.754226 GAGTTCAGAGCTCGAGGGAAT 59.246 52.381 15.58 0.00 0.00 3.01
400 401 1.178276 GAGTTCAGAGCTCGAGGGAA 58.822 55.000 15.58 8.41 0.00 3.97
401 402 0.681564 GGAGTTCAGAGCTCGAGGGA 60.682 60.000 15.58 2.17 34.00 4.20
402 403 1.671901 GGGAGTTCAGAGCTCGAGGG 61.672 65.000 15.58 0.00 34.00 4.30
403 404 0.682855 AGGGAGTTCAGAGCTCGAGG 60.683 60.000 15.58 2.24 34.00 4.63
404 405 0.738389 GAGGGAGTTCAGAGCTCGAG 59.262 60.000 8.45 8.45 34.00 4.04
405 406 0.329931 AGAGGGAGTTCAGAGCTCGA 59.670 55.000 8.37 6.12 34.00 4.04
406 407 0.738389 GAGAGGGAGTTCAGAGCTCG 59.262 60.000 8.37 3.55 34.00 5.03
407 408 1.750778 CAGAGAGGGAGTTCAGAGCTC 59.249 57.143 5.27 5.27 0.00 4.09
408 409 1.077005 ACAGAGAGGGAGTTCAGAGCT 59.923 52.381 0.00 0.00 0.00 4.09
409 410 1.555967 ACAGAGAGGGAGTTCAGAGC 58.444 55.000 0.00 0.00 0.00 4.09
410 411 4.709397 ACAATACAGAGAGGGAGTTCAGAG 59.291 45.833 0.00 0.00 0.00 3.35
411 412 4.678256 ACAATACAGAGAGGGAGTTCAGA 58.322 43.478 0.00 0.00 0.00 3.27
412 413 4.709397 AGACAATACAGAGAGGGAGTTCAG 59.291 45.833 0.00 0.00 0.00 3.02
413 414 4.678256 AGACAATACAGAGAGGGAGTTCA 58.322 43.478 0.00 0.00 0.00 3.18
414 415 5.394773 GGAAGACAATACAGAGAGGGAGTTC 60.395 48.000 0.00 0.00 0.00 3.01
415 416 4.468153 GGAAGACAATACAGAGAGGGAGTT 59.532 45.833 0.00 0.00 0.00 3.01
416 417 4.027437 GGAAGACAATACAGAGAGGGAGT 58.973 47.826 0.00 0.00 0.00 3.85
417 418 4.026744 TGGAAGACAATACAGAGAGGGAG 58.973 47.826 0.00 0.00 0.00 4.30
418 419 4.061131 TGGAAGACAATACAGAGAGGGA 57.939 45.455 0.00 0.00 0.00 4.20
419 420 4.406972 TCATGGAAGACAATACAGAGAGGG 59.593 45.833 0.00 0.00 0.00 4.30
420 421 5.604758 TCATGGAAGACAATACAGAGAGG 57.395 43.478 0.00 0.00 0.00 3.69
421 422 7.053316 AGATCATGGAAGACAATACAGAGAG 57.947 40.000 0.00 0.00 0.00 3.20
422 423 7.429374 AAGATCATGGAAGACAATACAGAGA 57.571 36.000 0.00 0.00 0.00 3.10
423 424 9.258826 CTAAAGATCATGGAAGACAATACAGAG 57.741 37.037 0.00 0.00 0.00 3.35
424 425 8.981659 TCTAAAGATCATGGAAGACAATACAGA 58.018 33.333 0.00 0.00 0.00 3.41
425 426 9.039870 GTCTAAAGATCATGGAAGACAATACAG 57.960 37.037 0.00 0.00 34.78 2.74
426 427 8.539544 TGTCTAAAGATCATGGAAGACAATACA 58.460 33.333 11.56 0.00 40.10 2.29
427 428 8.821894 GTGTCTAAAGATCATGGAAGACAATAC 58.178 37.037 14.15 3.94 43.40 1.89
428 429 8.539544 TGTGTCTAAAGATCATGGAAGACAATA 58.460 33.333 14.15 7.41 43.40 1.90
429 430 7.397221 TGTGTCTAAAGATCATGGAAGACAAT 58.603 34.615 14.15 0.00 43.40 2.71
430 431 6.768483 TGTGTCTAAAGATCATGGAAGACAA 58.232 36.000 14.15 6.38 43.40 3.18
431 432 6.358974 TGTGTCTAAAGATCATGGAAGACA 57.641 37.500 10.48 10.48 40.60 3.41
432 433 7.201679 CCATTGTGTCTAAAGATCATGGAAGAC 60.202 40.741 0.00 1.46 35.13 3.01
433 434 6.825213 CCATTGTGTCTAAAGATCATGGAAGA 59.175 38.462 0.00 0.00 0.00 2.87
434 435 6.825213 TCCATTGTGTCTAAAGATCATGGAAG 59.175 38.462 0.00 0.00 32.27 3.46
435 436 6.599244 GTCCATTGTGTCTAAAGATCATGGAA 59.401 38.462 5.84 0.00 36.40 3.53
436 437 6.115446 GTCCATTGTGTCTAAAGATCATGGA 58.885 40.000 0.00 0.00 32.71 3.41
437 438 5.007039 CGTCCATTGTGTCTAAAGATCATGG 59.993 44.000 0.00 0.00 0.00 3.66
438 439 5.503031 GCGTCCATTGTGTCTAAAGATCATG 60.503 44.000 0.00 0.00 0.00 3.07
439 440 4.572389 GCGTCCATTGTGTCTAAAGATCAT 59.428 41.667 0.00 0.00 0.00 2.45
440 441 3.932710 GCGTCCATTGTGTCTAAAGATCA 59.067 43.478 0.00 0.00 0.00 2.92
441 442 3.000322 CGCGTCCATTGTGTCTAAAGATC 60.000 47.826 0.00 0.00 0.00 2.75
442 443 2.930040 CGCGTCCATTGTGTCTAAAGAT 59.070 45.455 0.00 0.00 0.00 2.40
443 444 2.333926 CGCGTCCATTGTGTCTAAAGA 58.666 47.619 0.00 0.00 0.00 2.52
444 445 1.201921 GCGCGTCCATTGTGTCTAAAG 60.202 52.381 8.43 0.00 0.00 1.85
445 446 0.793861 GCGCGTCCATTGTGTCTAAA 59.206 50.000 8.43 0.00 0.00 1.85
446 447 1.017177 GGCGCGTCCATTGTGTCTAA 61.017 55.000 8.43 0.00 34.01 2.10
447 448 1.447140 GGCGCGTCCATTGTGTCTA 60.447 57.895 8.43 0.00 34.01 2.59
448 449 2.742372 GGCGCGTCCATTGTGTCT 60.742 61.111 8.43 0.00 34.01 3.41
449 450 4.147322 CGGCGCGTCCATTGTGTC 62.147 66.667 17.57 0.00 34.01 3.67
450 451 4.673298 TCGGCGCGTCCATTGTGT 62.673 61.111 17.57 0.00 34.01 3.72
451 452 4.147322 GTCGGCGCGTCCATTGTG 62.147 66.667 17.57 0.00 34.01 3.33
452 453 4.373116 AGTCGGCGCGTCCATTGT 62.373 61.111 17.57 0.00 34.01 2.71
453 454 3.853330 CAGTCGGCGCGTCCATTG 61.853 66.667 17.57 3.40 34.01 2.82
466 467 0.247736 ATGTTGGAGCTCGACCAGTC 59.752 55.000 7.83 0.00 38.70 3.51
467 468 1.204941 GTATGTTGGAGCTCGACCAGT 59.795 52.381 7.83 1.55 38.70 4.00
468 469 1.471676 GGTATGTTGGAGCTCGACCAG 60.472 57.143 7.83 0.00 38.70 4.00
469 470 0.535335 GGTATGTTGGAGCTCGACCA 59.465 55.000 7.83 2.40 35.47 4.02
470 471 0.179081 GGGTATGTTGGAGCTCGACC 60.179 60.000 7.83 7.68 0.00 4.79
471 472 0.535335 TGGGTATGTTGGAGCTCGAC 59.465 55.000 7.83 9.65 0.00 4.20
472 473 1.271856 TTGGGTATGTTGGAGCTCGA 58.728 50.000 7.83 0.00 0.00 4.04
473 474 1.942657 CATTGGGTATGTTGGAGCTCG 59.057 52.381 7.83 0.00 0.00 5.03
474 475 3.209410 CTCATTGGGTATGTTGGAGCTC 58.791 50.000 4.71 4.71 35.64 4.09
475 476 2.684927 GCTCATTGGGTATGTTGGAGCT 60.685 50.000 0.00 0.00 35.64 4.09
476 477 1.678101 GCTCATTGGGTATGTTGGAGC 59.322 52.381 0.00 0.00 35.64 4.70
477 478 1.942657 CGCTCATTGGGTATGTTGGAG 59.057 52.381 0.00 0.00 35.64 3.86
478 479 1.408127 CCGCTCATTGGGTATGTTGGA 60.408 52.381 0.00 0.00 35.64 3.53
479 480 1.024271 CCGCTCATTGGGTATGTTGG 58.976 55.000 0.00 0.00 35.64 3.77
480 481 1.024271 CCCGCTCATTGGGTATGTTG 58.976 55.000 0.00 0.00 42.07 3.33
481 482 3.494850 CCCGCTCATTGGGTATGTT 57.505 52.632 0.00 0.00 42.07 2.71
488 489 1.097547 GTGGTCATCCCGCTCATTGG 61.098 60.000 0.00 0.00 40.81 3.16
489 490 1.097547 GGTGGTCATCCCGCTCATTG 61.098 60.000 0.00 0.00 43.71 2.82
490 491 1.224592 GGTGGTCATCCCGCTCATT 59.775 57.895 0.00 0.00 43.71 2.57
491 492 2.746375 GGGTGGTCATCCCGCTCAT 61.746 63.158 0.00 0.00 44.30 2.90
492 493 3.399181 GGGTGGTCATCCCGCTCA 61.399 66.667 0.00 0.00 44.30 4.26
500 501 4.652131 TTTGGCGCGGGTGGTCAT 62.652 61.111 8.83 0.00 0.00 3.06
505 506 2.851071 TTTTCCTTTGGCGCGGGTG 61.851 57.895 8.83 0.00 0.00 4.61
506 507 2.519780 TTTTCCTTTGGCGCGGGT 60.520 55.556 8.83 0.00 0.00 5.28
507 508 2.049526 GTTTTCCTTTGGCGCGGG 60.050 61.111 8.83 0.00 0.00 6.13
508 509 2.049526 GGTTTTCCTTTGGCGCGG 60.050 61.111 8.83 0.00 36.94 6.46
509 510 1.660264 GTGGTTTTCCTTTGGCGCG 60.660 57.895 0.00 0.00 41.38 6.86
510 511 1.300620 GGTGGTTTTCCTTTGGCGC 60.301 57.895 0.00 0.00 41.38 6.53
511 512 0.249280 GTGGTGGTTTTCCTTTGGCG 60.249 55.000 0.00 0.00 41.38 5.69
512 513 0.249280 CGTGGTGGTTTTCCTTTGGC 60.249 55.000 0.00 0.00 41.38 4.52
513 514 0.387565 CCGTGGTGGTTTTCCTTTGG 59.612 55.000 0.00 0.00 41.38 3.28
514 515 0.249280 GCCGTGGTGGTTTTCCTTTG 60.249 55.000 0.00 0.00 41.21 2.77
515 516 0.684805 TGCCGTGGTGGTTTTCCTTT 60.685 50.000 0.00 0.00 41.21 3.11
516 517 1.076632 TGCCGTGGTGGTTTTCCTT 60.077 52.632 0.00 0.00 41.21 3.36
517 518 1.528309 CTGCCGTGGTGGTTTTCCT 60.528 57.895 0.00 0.00 41.21 3.36
518 519 1.515521 CTCTGCCGTGGTGGTTTTCC 61.516 60.000 0.00 0.00 41.21 3.13
519 520 1.515521 CCTCTGCCGTGGTGGTTTTC 61.516 60.000 0.00 0.00 41.21 2.29
520 521 1.528309 CCTCTGCCGTGGTGGTTTT 60.528 57.895 0.00 0.00 41.21 2.43
521 522 2.113139 CCTCTGCCGTGGTGGTTT 59.887 61.111 0.00 0.00 41.21 3.27
522 523 4.643387 GCCTCTGCCGTGGTGGTT 62.643 66.667 0.00 0.00 41.21 3.67
532 533 0.818296 TTCTTACTCTCGGCCTCTGC 59.182 55.000 0.00 0.00 0.00 4.26
533 534 1.407258 CCTTCTTACTCTCGGCCTCTG 59.593 57.143 0.00 0.00 0.00 3.35
534 535 1.770294 CCTTCTTACTCTCGGCCTCT 58.230 55.000 0.00 0.00 0.00 3.69
535 536 0.103390 GCCTTCTTACTCTCGGCCTC 59.897 60.000 0.00 0.00 34.75 4.70
536 537 2.203806 GCCTTCTTACTCTCGGCCT 58.796 57.895 0.00 0.00 34.75 5.19
537 538 4.838046 GCCTTCTTACTCTCGGCC 57.162 61.111 0.00 0.00 34.75 6.13
538 539 0.249398 TTGGCCTTCTTACTCTCGGC 59.751 55.000 3.32 0.00 39.98 5.54
539 540 2.233922 TCTTTGGCCTTCTTACTCTCGG 59.766 50.000 3.32 0.00 0.00 4.63
540 541 3.516615 CTCTTTGGCCTTCTTACTCTCG 58.483 50.000 3.32 0.00 0.00 4.04
541 542 3.515901 TCCTCTTTGGCCTTCTTACTCTC 59.484 47.826 3.32 0.00 35.26 3.20
542 543 3.517500 CTCCTCTTTGGCCTTCTTACTCT 59.482 47.826 3.32 0.00 35.26 3.24
543 544 3.369997 CCTCCTCTTTGGCCTTCTTACTC 60.370 52.174 3.32 0.00 35.26 2.59
544 545 2.573915 CCTCCTCTTTGGCCTTCTTACT 59.426 50.000 3.32 0.00 35.26 2.24
545 546 2.356227 CCCTCCTCTTTGGCCTTCTTAC 60.356 54.545 3.32 0.00 35.26 2.34
546 547 1.916181 CCCTCCTCTTTGGCCTTCTTA 59.084 52.381 3.32 0.00 35.26 2.10
547 548 0.701147 CCCTCCTCTTTGGCCTTCTT 59.299 55.000 3.32 0.00 35.26 2.52
548 549 0.476611 ACCCTCCTCTTTGGCCTTCT 60.477 55.000 3.32 0.00 35.26 2.85
549 550 1.210722 CTACCCTCCTCTTTGGCCTTC 59.789 57.143 3.32 0.00 35.26 3.46
550 551 1.203440 TCTACCCTCCTCTTTGGCCTT 60.203 52.381 3.32 0.00 35.26 4.35
551 552 0.417841 TCTACCCTCCTCTTTGGCCT 59.582 55.000 3.32 0.00 35.26 5.19
552 553 0.833949 CTCTACCCTCCTCTTTGGCC 59.166 60.000 0.00 0.00 35.26 5.36
553 554 0.833949 CCTCTACCCTCCTCTTTGGC 59.166 60.000 0.00 0.00 35.26 4.52
554 555 1.501582 CCCTCTACCCTCCTCTTTGG 58.498 60.000 0.00 0.00 37.10 3.28
555 556 1.273896 ACCCCTCTACCCTCCTCTTTG 60.274 57.143 0.00 0.00 0.00 2.77
556 557 1.102938 ACCCCTCTACCCTCCTCTTT 58.897 55.000 0.00 0.00 0.00 2.52
557 558 0.340208 CACCCCTCTACCCTCCTCTT 59.660 60.000 0.00 0.00 0.00 2.85
558 559 1.595058 CCACCCCTCTACCCTCCTCT 61.595 65.000 0.00 0.00 0.00 3.69
559 560 1.075151 CCACCCCTCTACCCTCCTC 60.075 68.421 0.00 0.00 0.00 3.71
560 561 3.120191 CCACCCCTCTACCCTCCT 58.880 66.667 0.00 0.00 0.00 3.69
561 562 2.768769 GCCACCCCTCTACCCTCC 60.769 72.222 0.00 0.00 0.00 4.30
562 563 3.155167 CGCCACCCCTCTACCCTC 61.155 72.222 0.00 0.00 0.00 4.30
563 564 4.798682 CCGCCACCCCTCTACCCT 62.799 72.222 0.00 0.00 0.00 4.34
564 565 3.684369 TACCGCCACCCCTCTACCC 62.684 68.421 0.00 0.00 0.00 3.69
565 566 2.042639 TACCGCCACCCCTCTACC 60.043 66.667 0.00 0.00 0.00 3.18
566 567 2.132352 CCTACCGCCACCCCTCTAC 61.132 68.421 0.00 0.00 0.00 2.59
567 568 2.281091 CCTACCGCCACCCCTCTA 59.719 66.667 0.00 0.00 0.00 2.43
568 569 4.798682 CCCTACCGCCACCCCTCT 62.799 72.222 0.00 0.00 0.00 3.69
570 571 4.669773 AACCCTACCGCCACCCCT 62.670 66.667 0.00 0.00 0.00 4.79
571 572 3.654143 AAACCCTACCGCCACCCC 61.654 66.667 0.00 0.00 0.00 4.95
572 573 2.360726 CAAACCCTACCGCCACCC 60.361 66.667 0.00 0.00 0.00 4.61
573 574 1.228337 AACAAACCCTACCGCCACC 60.228 57.895 0.00 0.00 0.00 4.61
574 575 1.520600 CCAACAAACCCTACCGCCAC 61.521 60.000 0.00 0.00 0.00 5.01
575 576 1.228306 CCAACAAACCCTACCGCCA 60.228 57.895 0.00 0.00 0.00 5.69
576 577 1.974875 CCCAACAAACCCTACCGCC 60.975 63.158 0.00 0.00 0.00 6.13
577 578 2.632544 GCCCAACAAACCCTACCGC 61.633 63.158 0.00 0.00 0.00 5.68
578 579 1.074248 AGCCCAACAAACCCTACCG 59.926 57.895 0.00 0.00 0.00 4.02
579 580 0.178973 ACAGCCCAACAAACCCTACC 60.179 55.000 0.00 0.00 0.00 3.18
580 581 0.958822 CACAGCCCAACAAACCCTAC 59.041 55.000 0.00 0.00 0.00 3.18
581 582 0.553819 ACACAGCCCAACAAACCCTA 59.446 50.000 0.00 0.00 0.00 3.53
582 583 0.755327 GACACAGCCCAACAAACCCT 60.755 55.000 0.00 0.00 0.00 4.34
583 584 0.755327 AGACACAGCCCAACAAACCC 60.755 55.000 0.00 0.00 0.00 4.11
584 585 1.111277 AAGACACAGCCCAACAAACC 58.889 50.000 0.00 0.00 0.00 3.27
585 586 2.034179 GGTAAGACACAGCCCAACAAAC 59.966 50.000 0.00 0.00 0.00 2.93
586 587 2.092103 AGGTAAGACACAGCCCAACAAA 60.092 45.455 0.00 0.00 0.00 2.83
1466 1476 3.033659 ACTCCATCACCGACTTATCCT 57.966 47.619 0.00 0.00 0.00 3.24
1911 1921 3.010200 GAACCCCTCGAGTTACCTCTA 57.990 52.381 12.31 0.00 35.43 2.43
2712 2723 4.019950 TGTCCACACATCAGAGTGAATCAT 60.020 41.667 0.57 0.00 42.05 2.45
2944 2955 2.301346 CTTGTGCTGACAGGAAACCTT 58.699 47.619 4.26 0.00 30.69 3.50
3030 3041 3.745975 CGAGCCACTTCTAAAATGTGTCA 59.254 43.478 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.