Multiple sequence alignment - TraesCS7B01G170700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G170700 chr7B 100.000 2525 0 0 1 2525 242909585 242912109 0.000000e+00 4663.0
1 TraesCS7B01G170700 chr7A 90.566 1431 90 21 463 1856 286148494 286149916 0.000000e+00 1853.0
2 TraesCS7B01G170700 chr7A 90.566 689 38 6 1859 2525 286149955 286150638 0.000000e+00 887.0
3 TraesCS7B01G170700 chr7D 93.266 995 41 12 885 1856 263450198 263451189 0.000000e+00 1443.0
4 TraesCS7B01G170700 chr7D 86.219 566 31 10 1980 2525 263451672 263452210 1.010000e-158 569.0
5 TraesCS7B01G170700 chr7D 89.500 400 36 4 463 859 263449808 263450204 3.750000e-138 501.0
6 TraesCS7B01G170700 chr7D 83.656 465 56 14 1 449 263385679 263386139 1.080000e-113 420.0
7 TraesCS7B01G170700 chr7D 93.007 143 4 2 1843 1980 263451209 263451350 1.180000e-48 204.0
8 TraesCS7B01G170700 chr3D 76.056 355 60 20 23 363 90150445 90150788 7.230000e-36 161.0
9 TraesCS7B01G170700 chr5B 84.211 76 10 2 2129 2203 116832345 116832271 3.480000e-09 73.1
10 TraesCS7B01G170700 chr2D 90.244 41 2 2 240 279 106120936 106120975 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G170700 chr7B 242909585 242912109 2524 False 4663.00 4663 100.000 1 2525 1 chr7B.!!$F1 2524
1 TraesCS7B01G170700 chr7A 286148494 286150638 2144 False 1370.00 1853 90.566 463 2525 2 chr7A.!!$F1 2062
2 TraesCS7B01G170700 chr7D 263449808 263452210 2402 False 679.25 1443 90.498 463 2525 4 chr7D.!!$F2 2062

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 242 0.031857 TGCAATGCACCTTTGGTTCG 59.968 50.0 2.72 0.0 31.02 3.95 F
245 246 0.250901 ATGCACCTTTGGTTCGCTCT 60.251 50.0 0.00 0.0 31.02 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1501 1527 0.043334 TTCCTCCTCTCCTCCCTTGG 59.957 60.0 0.00 0.0 0.00 3.61 R
2029 2432 1.078709 CTAGGTTCGTCGTACGGTCA 58.921 55.0 16.52 0.0 42.81 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.310652 GCTACACCTCCCTCCACC 58.689 66.667 0.00 0.00 0.00 4.61
18 19 1.612442 GCTACACCTCCCTCCACCA 60.612 63.158 0.00 0.00 0.00 4.17
19 20 1.900545 GCTACACCTCCCTCCACCAC 61.901 65.000 0.00 0.00 0.00 4.16
20 21 0.544357 CTACACCTCCCTCCACCACA 60.544 60.000 0.00 0.00 0.00 4.17
21 22 0.544357 TACACCTCCCTCCACCACAG 60.544 60.000 0.00 0.00 0.00 3.66
22 23 2.203998 ACCTCCCTCCACCACAGG 60.204 66.667 0.00 0.00 0.00 4.00
23 24 2.203998 CCTCCCTCCACCACAGGT 60.204 66.667 0.00 0.00 35.62 4.00
24 25 1.847968 CCTCCCTCCACCACAGGTT 60.848 63.158 0.00 0.00 31.02 3.50
25 26 1.427072 CCTCCCTCCACCACAGGTTT 61.427 60.000 0.00 0.00 31.02 3.27
26 27 0.250901 CTCCCTCCACCACAGGTTTG 60.251 60.000 0.00 0.00 31.02 2.93
27 28 0.991355 TCCCTCCACCACAGGTTTGT 60.991 55.000 0.00 0.00 38.31 2.83
28 29 0.537371 CCCTCCACCACAGGTTTGTC 60.537 60.000 0.00 0.00 34.62 3.18
29 30 0.474184 CCTCCACCACAGGTTTGTCT 59.526 55.000 0.00 0.00 34.62 3.41
30 31 1.133792 CCTCCACCACAGGTTTGTCTT 60.134 52.381 0.00 0.00 34.62 3.01
31 32 2.654863 CTCCACCACAGGTTTGTCTTT 58.345 47.619 0.00 0.00 34.62 2.52
32 33 2.358898 CTCCACCACAGGTTTGTCTTTG 59.641 50.000 0.00 0.00 34.62 2.77
33 34 1.408702 CCACCACAGGTTTGTCTTTGG 59.591 52.381 0.00 0.00 39.73 3.28
34 35 2.099405 CACCACAGGTTTGTCTTTGGT 58.901 47.619 0.00 0.00 45.60 3.67
35 36 2.099405 ACCACAGGTTTGTCTTTGGTG 58.901 47.619 2.35 0.00 43.74 4.17
36 37 2.099405 CCACAGGTTTGTCTTTGGTGT 58.901 47.619 0.00 0.00 34.62 4.16
37 38 3.283751 CCACAGGTTTGTCTTTGGTGTA 58.716 45.455 0.00 0.00 34.62 2.90
38 39 3.888930 CCACAGGTTTGTCTTTGGTGTAT 59.111 43.478 0.00 0.00 34.62 2.29
39 40 4.340950 CCACAGGTTTGTCTTTGGTGTATT 59.659 41.667 0.00 0.00 34.62 1.89
40 41 5.507315 CCACAGGTTTGTCTTTGGTGTATTC 60.507 44.000 0.00 0.00 34.62 1.75
41 42 4.274950 ACAGGTTTGTCTTTGGTGTATTCG 59.725 41.667 0.00 0.00 29.46 3.34
42 43 3.252458 AGGTTTGTCTTTGGTGTATTCGC 59.748 43.478 0.00 0.00 0.00 4.70
43 44 3.252458 GGTTTGTCTTTGGTGTATTCGCT 59.748 43.478 0.00 0.00 0.00 4.93
44 45 4.219033 GTTTGTCTTTGGTGTATTCGCTG 58.781 43.478 0.00 0.00 0.00 5.18
45 46 2.422597 TGTCTTTGGTGTATTCGCTGG 58.577 47.619 0.00 0.00 0.00 4.85
46 47 2.037902 TGTCTTTGGTGTATTCGCTGGA 59.962 45.455 0.00 0.00 0.00 3.86
47 48 3.270877 GTCTTTGGTGTATTCGCTGGAT 58.729 45.455 0.00 0.00 0.00 3.41
48 49 3.309954 GTCTTTGGTGTATTCGCTGGATC 59.690 47.826 0.00 0.00 0.00 3.36
49 50 2.325583 TTGGTGTATTCGCTGGATCC 57.674 50.000 4.20 4.20 0.00 3.36
50 51 0.104120 TGGTGTATTCGCTGGATCCG 59.896 55.000 7.39 3.14 0.00 4.18
51 52 0.600255 GGTGTATTCGCTGGATCCGG 60.600 60.000 16.98 16.98 0.00 5.14
52 53 0.104304 GTGTATTCGCTGGATCCGGT 59.896 55.000 21.88 4.54 0.00 5.28
53 54 0.387929 TGTATTCGCTGGATCCGGTC 59.612 55.000 21.88 12.86 0.00 4.79
54 55 0.674534 GTATTCGCTGGATCCGGTCT 59.325 55.000 21.88 6.95 0.00 3.85
55 56 1.068741 GTATTCGCTGGATCCGGTCTT 59.931 52.381 21.88 7.44 0.00 3.01
56 57 0.105039 ATTCGCTGGATCCGGTCTTC 59.895 55.000 21.88 4.19 0.00 2.87
57 58 2.278857 CGCTGGATCCGGTCTTCG 60.279 66.667 21.88 12.66 38.88 3.79
58 59 2.893398 GCTGGATCCGGTCTTCGT 59.107 61.111 21.88 0.00 37.11 3.85
59 60 1.218316 GCTGGATCCGGTCTTCGTT 59.782 57.895 21.88 0.00 37.11 3.85
60 61 0.806492 GCTGGATCCGGTCTTCGTTC 60.806 60.000 21.88 0.00 37.11 3.95
61 62 0.525668 CTGGATCCGGTCTTCGTTCG 60.526 60.000 12.93 0.00 37.11 3.95
62 63 1.246056 TGGATCCGGTCTTCGTTCGT 61.246 55.000 7.39 0.00 37.11 3.85
63 64 0.525029 GGATCCGGTCTTCGTTCGTC 60.525 60.000 0.00 0.00 37.11 4.20
64 65 0.450983 GATCCGGTCTTCGTTCGTCT 59.549 55.000 0.00 0.00 37.11 4.18
65 66 1.667724 GATCCGGTCTTCGTTCGTCTA 59.332 52.381 0.00 0.00 37.11 2.59
66 67 1.742761 TCCGGTCTTCGTTCGTCTAT 58.257 50.000 0.00 0.00 37.11 1.98
67 68 2.905075 TCCGGTCTTCGTTCGTCTATA 58.095 47.619 0.00 0.00 37.11 1.31
68 69 3.470709 TCCGGTCTTCGTTCGTCTATAT 58.529 45.455 0.00 0.00 37.11 0.86
69 70 4.631131 TCCGGTCTTCGTTCGTCTATATA 58.369 43.478 0.00 0.00 37.11 0.86
70 71 5.240891 TCCGGTCTTCGTTCGTCTATATAT 58.759 41.667 0.00 0.00 37.11 0.86
71 72 5.121298 TCCGGTCTTCGTTCGTCTATATATG 59.879 44.000 0.00 0.00 37.11 1.78
72 73 5.106791 CCGGTCTTCGTTCGTCTATATATGT 60.107 44.000 0.00 0.00 37.11 2.29
73 74 5.789021 CGGTCTTCGTTCGTCTATATATGTG 59.211 44.000 0.00 0.00 0.00 3.21
74 75 6.565435 CGGTCTTCGTTCGTCTATATATGTGT 60.565 42.308 0.00 0.00 0.00 3.72
75 76 6.577800 GGTCTTCGTTCGTCTATATATGTGTG 59.422 42.308 0.00 0.00 0.00 3.82
76 77 7.130917 GTCTTCGTTCGTCTATATATGTGTGT 58.869 38.462 0.00 0.00 0.00 3.72
77 78 7.111732 GTCTTCGTTCGTCTATATATGTGTGTG 59.888 40.741 0.00 0.00 0.00 3.82
78 79 6.367686 TCGTTCGTCTATATATGTGTGTGT 57.632 37.500 0.00 0.00 0.00 3.72
79 80 6.196571 TCGTTCGTCTATATATGTGTGTGTG 58.803 40.000 0.00 0.00 0.00 3.82
80 81 5.108368 CGTTCGTCTATATATGTGTGTGTGC 60.108 44.000 0.00 0.00 0.00 4.57
81 82 4.533222 TCGTCTATATATGTGTGTGTGCG 58.467 43.478 0.00 0.00 0.00 5.34
82 83 4.273969 TCGTCTATATATGTGTGTGTGCGA 59.726 41.667 0.00 0.00 0.00 5.10
83 84 4.613031 CGTCTATATATGTGTGTGTGCGAG 59.387 45.833 0.00 0.00 0.00 5.03
84 85 5.520632 GTCTATATATGTGTGTGTGCGAGT 58.479 41.667 0.00 0.00 0.00 4.18
85 86 5.977725 GTCTATATATGTGTGTGTGCGAGTT 59.022 40.000 0.00 0.00 0.00 3.01
86 87 5.977129 TCTATATATGTGTGTGTGCGAGTTG 59.023 40.000 0.00 0.00 0.00 3.16
87 88 1.507562 TATGTGTGTGTGCGAGTTGG 58.492 50.000 0.00 0.00 0.00 3.77
88 89 0.179059 ATGTGTGTGTGCGAGTTGGA 60.179 50.000 0.00 0.00 0.00 3.53
89 90 0.179059 TGTGTGTGTGCGAGTTGGAT 60.179 50.000 0.00 0.00 0.00 3.41
90 91 0.512952 GTGTGTGTGCGAGTTGGATC 59.487 55.000 0.00 0.00 0.00 3.36
91 92 0.602638 TGTGTGTGCGAGTTGGATCC 60.603 55.000 4.20 4.20 0.00 3.36
92 93 0.320771 GTGTGTGCGAGTTGGATCCT 60.321 55.000 14.23 0.00 0.00 3.24
93 94 0.396435 TGTGTGCGAGTTGGATCCTT 59.604 50.000 14.23 0.00 0.00 3.36
94 95 1.079503 GTGTGCGAGTTGGATCCTTC 58.920 55.000 14.23 7.31 0.00 3.46
95 96 0.036388 TGTGCGAGTTGGATCCTTCC 60.036 55.000 14.23 0.32 42.94 3.46
96 97 1.084370 GTGCGAGTTGGATCCTTCCG 61.084 60.000 14.23 11.96 45.89 4.30
97 98 1.521681 GCGAGTTGGATCCTTCCGG 60.522 63.158 14.23 0.00 45.89 5.14
98 99 1.898154 CGAGTTGGATCCTTCCGGT 59.102 57.895 14.23 0.00 45.89 5.28
99 100 0.179108 CGAGTTGGATCCTTCCGGTC 60.179 60.000 14.23 0.57 45.89 4.79
100 101 1.196012 GAGTTGGATCCTTCCGGTCT 58.804 55.000 14.23 0.88 45.89 3.85
101 102 2.385803 GAGTTGGATCCTTCCGGTCTA 58.614 52.381 14.23 0.00 45.89 2.59
102 103 2.101082 GAGTTGGATCCTTCCGGTCTAC 59.899 54.545 14.23 0.00 45.89 2.59
103 104 1.108776 TTGGATCCTTCCGGTCTACG 58.891 55.000 14.23 0.00 45.89 3.51
104 105 1.363080 GGATCCTTCCGGTCTACGC 59.637 63.158 3.84 0.00 42.52 4.42
105 106 1.108132 GGATCCTTCCGGTCTACGCT 61.108 60.000 3.84 0.00 42.52 5.07
106 107 0.745468 GATCCTTCCGGTCTACGCTT 59.255 55.000 0.00 0.00 42.52 4.68
107 108 1.136500 GATCCTTCCGGTCTACGCTTT 59.864 52.381 0.00 0.00 42.52 3.51
108 109 0.971386 TCCTTCCGGTCTACGCTTTT 59.029 50.000 0.00 0.00 42.52 2.27
109 110 1.345415 TCCTTCCGGTCTACGCTTTTT 59.655 47.619 0.00 0.00 42.52 1.94
110 111 1.463444 CCTTCCGGTCTACGCTTTTTG 59.537 52.381 0.00 0.00 42.52 2.44
111 112 2.140717 CTTCCGGTCTACGCTTTTTGT 58.859 47.619 0.00 0.00 42.52 2.83
112 113 2.243602 TCCGGTCTACGCTTTTTGTT 57.756 45.000 0.00 0.00 42.52 2.83
113 114 2.137523 TCCGGTCTACGCTTTTTGTTC 58.862 47.619 0.00 0.00 42.52 3.18
114 115 1.196127 CCGGTCTACGCTTTTTGTTCC 59.804 52.381 0.00 0.00 42.52 3.62
115 116 2.140717 CGGTCTACGCTTTTTGTTCCT 58.859 47.619 0.00 0.00 34.82 3.36
116 117 2.157085 CGGTCTACGCTTTTTGTTCCTC 59.843 50.000 0.00 0.00 34.82 3.71
117 118 2.157085 GGTCTACGCTTTTTGTTCCTCG 59.843 50.000 0.00 0.00 0.00 4.63
118 119 2.157085 GTCTACGCTTTTTGTTCCTCGG 59.843 50.000 0.00 0.00 0.00 4.63
119 120 0.869730 TACGCTTTTTGTTCCTCGGC 59.130 50.000 0.00 0.00 0.00 5.54
120 121 1.440353 CGCTTTTTGTTCCTCGGCG 60.440 57.895 0.00 0.00 35.54 6.46
121 122 1.081442 GCTTTTTGTTCCTCGGCGG 60.081 57.895 7.21 0.00 0.00 6.13
122 123 1.081442 CTTTTTGTTCCTCGGCGGC 60.081 57.895 7.21 0.00 0.00 6.53
123 124 2.780149 CTTTTTGTTCCTCGGCGGCG 62.780 60.000 27.15 27.15 0.00 6.46
131 132 4.891727 CTCGGCGGCGGTTGCTAT 62.892 66.667 31.73 0.00 42.25 2.97
132 133 4.460683 TCGGCGGCGGTTGCTATT 62.461 61.111 31.73 0.00 42.25 1.73
133 134 3.937062 CGGCGGCGGTTGCTATTC 61.937 66.667 25.36 0.00 42.25 1.75
134 135 2.513897 GGCGGCGGTTGCTATTCT 60.514 61.111 9.78 0.00 42.25 2.40
135 136 2.709475 GCGGCGGTTGCTATTCTG 59.291 61.111 9.78 0.00 42.25 3.02
136 137 2.823829 GCGGCGGTTGCTATTCTGG 61.824 63.158 9.78 0.00 42.25 3.86
137 138 1.449601 CGGCGGTTGCTATTCTGGT 60.450 57.895 0.00 0.00 42.25 4.00
138 139 1.705337 CGGCGGTTGCTATTCTGGTG 61.705 60.000 0.00 0.00 42.25 4.17
139 140 1.429423 GCGGTTGCTATTCTGGTGC 59.571 57.895 0.00 0.00 38.39 5.01
140 141 1.715585 CGGTTGCTATTCTGGTGCG 59.284 57.895 0.00 0.00 0.00 5.34
141 142 1.705337 CGGTTGCTATTCTGGTGCGG 61.705 60.000 0.00 0.00 0.00 5.69
142 143 0.676782 GGTTGCTATTCTGGTGCGGT 60.677 55.000 0.00 0.00 0.00 5.68
143 144 0.447801 GTTGCTATTCTGGTGCGGTG 59.552 55.000 0.00 0.00 0.00 4.94
144 145 0.036164 TTGCTATTCTGGTGCGGTGT 59.964 50.000 0.00 0.00 0.00 4.16
145 146 0.899019 TGCTATTCTGGTGCGGTGTA 59.101 50.000 0.00 0.00 0.00 2.90
146 147 1.276705 TGCTATTCTGGTGCGGTGTAA 59.723 47.619 0.00 0.00 0.00 2.41
147 148 1.933853 GCTATTCTGGTGCGGTGTAAG 59.066 52.381 0.00 0.00 0.00 2.34
148 149 2.550978 CTATTCTGGTGCGGTGTAAGG 58.449 52.381 0.00 0.00 0.00 2.69
149 150 0.676782 ATTCTGGTGCGGTGTAAGGC 60.677 55.000 0.00 0.00 0.00 4.35
150 151 2.741486 TTCTGGTGCGGTGTAAGGCC 62.741 60.000 0.00 0.00 0.00 5.19
151 152 3.246112 TGGTGCGGTGTAAGGCCT 61.246 61.111 0.00 0.00 0.00 5.19
152 153 2.033602 GGTGCGGTGTAAGGCCTT 59.966 61.111 24.18 24.18 0.00 4.35
153 154 1.297364 GGTGCGGTGTAAGGCCTTA 59.703 57.895 21.68 21.68 0.00 2.69
154 155 0.743345 GGTGCGGTGTAAGGCCTTAG 60.743 60.000 25.83 14.67 0.00 2.18
155 156 0.036671 GTGCGGTGTAAGGCCTTAGT 60.037 55.000 25.83 2.45 0.00 2.24
156 157 1.205417 GTGCGGTGTAAGGCCTTAGTA 59.795 52.381 25.83 14.76 0.00 1.82
157 158 1.205417 TGCGGTGTAAGGCCTTAGTAC 59.795 52.381 25.83 24.04 0.00 2.73
158 159 1.800286 GCGGTGTAAGGCCTTAGTACG 60.800 57.143 25.83 26.07 0.00 3.67
159 160 1.745087 CGGTGTAAGGCCTTAGTACGA 59.255 52.381 25.83 1.74 0.00 3.43
160 161 2.478539 CGGTGTAAGGCCTTAGTACGAC 60.479 54.545 25.83 15.66 0.00 4.34
161 162 2.478539 GGTGTAAGGCCTTAGTACGACG 60.479 54.545 25.83 0.00 0.00 5.12
162 163 2.420022 GTGTAAGGCCTTAGTACGACGA 59.580 50.000 25.83 0.00 0.00 4.20
163 164 2.420022 TGTAAGGCCTTAGTACGACGAC 59.580 50.000 25.83 13.44 0.00 4.34
164 165 1.831580 AAGGCCTTAGTACGACGACT 58.168 50.000 18.87 3.47 0.00 4.18
165 166 1.831580 AGGCCTTAGTACGACGACTT 58.168 50.000 0.00 0.00 0.00 3.01
166 167 1.742268 AGGCCTTAGTACGACGACTTC 59.258 52.381 0.00 0.00 0.00 3.01
167 168 1.742268 GGCCTTAGTACGACGACTTCT 59.258 52.381 0.00 0.00 0.00 2.85
168 169 2.223226 GGCCTTAGTACGACGACTTCTC 60.223 54.545 0.00 0.00 0.00 2.87
169 170 2.223226 GCCTTAGTACGACGACTTCTCC 60.223 54.545 0.00 0.00 0.00 3.71
170 171 3.005554 CCTTAGTACGACGACTTCTCCA 58.994 50.000 0.00 0.00 0.00 3.86
171 172 3.181512 CCTTAGTACGACGACTTCTCCAC 60.182 52.174 0.00 0.00 0.00 4.02
172 173 2.181954 AGTACGACGACTTCTCCACT 57.818 50.000 0.00 0.00 0.00 4.00
173 174 1.805345 AGTACGACGACTTCTCCACTG 59.195 52.381 0.00 0.00 0.00 3.66
174 175 1.534595 GTACGACGACTTCTCCACTGT 59.465 52.381 0.00 0.00 0.00 3.55
175 176 0.592148 ACGACGACTTCTCCACTGTC 59.408 55.000 0.00 0.00 0.00 3.51
176 177 0.875728 CGACGACTTCTCCACTGTCT 59.124 55.000 0.00 0.00 0.00 3.41
177 178 1.400371 CGACGACTTCTCCACTGTCTG 60.400 57.143 0.00 0.00 0.00 3.51
178 179 0.315568 ACGACTTCTCCACTGTCTGC 59.684 55.000 0.00 0.00 0.00 4.26
179 180 0.600557 CGACTTCTCCACTGTCTGCT 59.399 55.000 0.00 0.00 0.00 4.24
180 181 1.813178 CGACTTCTCCACTGTCTGCTA 59.187 52.381 0.00 0.00 0.00 3.49
181 182 2.414824 CGACTTCTCCACTGTCTGCTAC 60.415 54.545 0.00 0.00 0.00 3.58
182 183 2.558795 GACTTCTCCACTGTCTGCTACA 59.441 50.000 0.00 0.00 36.42 2.74
183 184 2.965831 ACTTCTCCACTGTCTGCTACAA 59.034 45.455 0.00 0.00 37.74 2.41
184 185 3.580458 ACTTCTCCACTGTCTGCTACAAT 59.420 43.478 0.00 0.00 37.74 2.71
185 186 4.772624 ACTTCTCCACTGTCTGCTACAATA 59.227 41.667 0.00 0.00 37.74 1.90
186 187 5.246203 ACTTCTCCACTGTCTGCTACAATAA 59.754 40.000 0.00 0.00 37.74 1.40
187 188 5.939764 TCTCCACTGTCTGCTACAATAAT 57.060 39.130 0.00 0.00 37.74 1.28
188 189 5.664457 TCTCCACTGTCTGCTACAATAATG 58.336 41.667 0.00 0.00 37.74 1.90
189 190 5.187772 TCTCCACTGTCTGCTACAATAATGT 59.812 40.000 0.00 0.00 43.74 2.71
190 191 5.804639 TCCACTGTCTGCTACAATAATGTT 58.195 37.500 0.00 0.00 41.05 2.71
191 192 6.237901 TCCACTGTCTGCTACAATAATGTTT 58.762 36.000 0.00 0.00 41.05 2.83
192 193 6.149308 TCCACTGTCTGCTACAATAATGTTTG 59.851 38.462 0.00 0.00 41.05 2.93
193 194 5.796935 CACTGTCTGCTACAATAATGTTTGC 59.203 40.000 0.00 0.00 41.05 3.68
194 195 5.106157 ACTGTCTGCTACAATAATGTTTGCC 60.106 40.000 0.00 0.00 41.05 4.52
195 196 5.009631 TGTCTGCTACAATAATGTTTGCCT 58.990 37.500 0.00 0.00 41.05 4.75
196 197 5.106197 TGTCTGCTACAATAATGTTTGCCTG 60.106 40.000 0.00 0.00 41.05 4.85
197 198 4.398988 TCTGCTACAATAATGTTTGCCTGG 59.601 41.667 0.00 0.00 41.05 4.45
198 199 3.119173 TGCTACAATAATGTTTGCCTGGC 60.119 43.478 12.87 12.87 41.05 4.85
199 200 3.131046 GCTACAATAATGTTTGCCTGGCT 59.869 43.478 21.03 0.00 41.05 4.75
200 201 3.874392 ACAATAATGTTTGCCTGGCTC 57.126 42.857 21.03 10.76 35.91 4.70
201 202 3.164268 ACAATAATGTTTGCCTGGCTCA 58.836 40.909 21.03 15.88 35.91 4.26
202 203 3.194116 ACAATAATGTTTGCCTGGCTCAG 59.806 43.478 21.03 6.91 35.91 3.35
203 204 2.877097 TAATGTTTGCCTGGCTCAGA 57.123 45.000 21.03 5.08 32.44 3.27
204 205 2.226962 AATGTTTGCCTGGCTCAGAT 57.773 45.000 21.03 7.34 32.44 2.90
205 206 1.471119 ATGTTTGCCTGGCTCAGATG 58.529 50.000 21.03 0.00 32.44 2.90
206 207 0.401356 TGTTTGCCTGGCTCAGATGA 59.599 50.000 21.03 0.00 32.44 2.92
207 208 1.202915 TGTTTGCCTGGCTCAGATGAA 60.203 47.619 21.03 0.20 32.44 2.57
208 209 1.471684 GTTTGCCTGGCTCAGATGAAG 59.528 52.381 21.03 0.00 32.44 3.02
209 210 0.034767 TTGCCTGGCTCAGATGAAGG 60.035 55.000 21.03 0.00 32.44 3.46
210 211 0.911045 TGCCTGGCTCAGATGAAGGA 60.911 55.000 21.03 0.00 32.44 3.36
211 212 0.179051 GCCTGGCTCAGATGAAGGAG 60.179 60.000 12.43 0.00 32.44 3.69
212 213 0.469070 CCTGGCTCAGATGAAGGAGG 59.531 60.000 4.00 0.00 32.44 4.30
213 214 0.469070 CTGGCTCAGATGAAGGAGGG 59.531 60.000 0.00 0.00 32.44 4.30
214 215 0.043183 TGGCTCAGATGAAGGAGGGA 59.957 55.000 0.00 0.00 0.00 4.20
215 216 0.467804 GGCTCAGATGAAGGAGGGAC 59.532 60.000 0.00 0.00 0.00 4.46
216 217 1.198713 GCTCAGATGAAGGAGGGACA 58.801 55.000 0.00 0.00 0.00 4.02
217 218 1.556911 GCTCAGATGAAGGAGGGACAA 59.443 52.381 0.00 0.00 0.00 3.18
218 219 2.172293 GCTCAGATGAAGGAGGGACAAT 59.828 50.000 0.00 0.00 0.00 2.71
219 220 3.806380 CTCAGATGAAGGAGGGACAATG 58.194 50.000 0.00 0.00 0.00 2.82
220 221 2.092753 TCAGATGAAGGAGGGACAATGC 60.093 50.000 0.00 0.00 0.00 3.56
221 222 1.213926 AGATGAAGGAGGGACAATGCC 59.786 52.381 0.00 0.00 0.00 4.40
222 223 1.213926 GATGAAGGAGGGACAATGCCT 59.786 52.381 0.00 0.00 42.67 4.75
223 224 0.329261 TGAAGGAGGGACAATGCCTG 59.671 55.000 0.00 0.00 38.79 4.85
224 225 1.000396 AAGGAGGGACAATGCCTGC 60.000 57.895 0.00 0.00 46.40 4.85
225 226 2.356278 GGAGGGACAATGCCTGCA 59.644 61.111 2.97 0.00 45.39 4.41
226 227 1.304381 GGAGGGACAATGCCTGCAA 60.304 57.895 2.97 0.00 45.39 4.08
227 228 0.685458 GGAGGGACAATGCCTGCAAT 60.685 55.000 2.97 0.00 45.39 3.56
228 229 0.458669 GAGGGACAATGCCTGCAATG 59.541 55.000 5.67 5.67 38.79 2.82
229 230 1.153509 GGGACAATGCCTGCAATGC 60.154 57.895 7.09 0.00 30.49 3.56
230 231 1.592743 GGACAATGCCTGCAATGCA 59.407 52.632 7.99 7.99 42.99 3.96
231 232 0.738412 GGACAATGCCTGCAATGCAC 60.738 55.000 2.72 0.00 41.21 4.57
232 233 0.738412 GACAATGCCTGCAATGCACC 60.738 55.000 2.72 0.00 41.21 5.01
233 234 1.189524 ACAATGCCTGCAATGCACCT 61.190 50.000 2.72 1.32 41.21 4.00
234 235 0.036765 CAATGCCTGCAATGCACCTT 60.037 50.000 2.72 2.38 41.21 3.50
235 236 0.688487 AATGCCTGCAATGCACCTTT 59.312 45.000 2.72 0.30 41.21 3.11
236 237 0.036765 ATGCCTGCAATGCACCTTTG 60.037 50.000 2.72 0.00 41.21 2.77
237 238 1.375013 GCCTGCAATGCACCTTTGG 60.375 57.895 2.72 4.79 33.79 3.28
238 239 2.051941 CCTGCAATGCACCTTTGGT 58.948 52.632 2.72 0.00 35.62 3.67
239 240 0.393820 CCTGCAATGCACCTTTGGTT 59.606 50.000 2.72 0.00 31.02 3.67
240 241 1.606224 CCTGCAATGCACCTTTGGTTC 60.606 52.381 2.72 0.00 31.02 3.62
241 242 0.031857 TGCAATGCACCTTTGGTTCG 59.968 50.000 2.72 0.00 31.02 3.95
242 243 1.284297 GCAATGCACCTTTGGTTCGC 61.284 55.000 0.00 0.00 31.02 4.70
243 244 0.314935 CAATGCACCTTTGGTTCGCT 59.685 50.000 0.00 0.00 31.02 4.93
244 245 0.598065 AATGCACCTTTGGTTCGCTC 59.402 50.000 0.00 0.00 31.02 5.03
245 246 0.250901 ATGCACCTTTGGTTCGCTCT 60.251 50.000 0.00 0.00 31.02 4.09
246 247 0.394938 TGCACCTTTGGTTCGCTCTA 59.605 50.000 0.00 0.00 31.02 2.43
247 248 1.079503 GCACCTTTGGTTCGCTCTAG 58.920 55.000 0.00 0.00 31.02 2.43
248 249 1.608283 GCACCTTTGGTTCGCTCTAGT 60.608 52.381 0.00 0.00 31.02 2.57
249 250 2.353406 GCACCTTTGGTTCGCTCTAGTA 60.353 50.000 0.00 0.00 31.02 1.82
250 251 3.251571 CACCTTTGGTTCGCTCTAGTAC 58.748 50.000 0.00 0.00 31.02 2.73
251 252 3.056749 CACCTTTGGTTCGCTCTAGTACT 60.057 47.826 0.00 0.00 31.02 2.73
252 253 3.577415 ACCTTTGGTTCGCTCTAGTACTT 59.423 43.478 0.00 0.00 27.29 2.24
253 254 3.927142 CCTTTGGTTCGCTCTAGTACTTG 59.073 47.826 0.00 0.00 0.00 3.16
254 255 4.557205 CTTTGGTTCGCTCTAGTACTTGT 58.443 43.478 0.00 0.00 0.00 3.16
255 256 5.336213 CCTTTGGTTCGCTCTAGTACTTGTA 60.336 44.000 0.00 0.00 0.00 2.41
256 257 4.959596 TGGTTCGCTCTAGTACTTGTAG 57.040 45.455 0.00 0.31 0.00 2.74
257 258 4.330250 TGGTTCGCTCTAGTACTTGTAGT 58.670 43.478 0.00 0.00 0.00 2.73
258 259 4.763793 TGGTTCGCTCTAGTACTTGTAGTT 59.236 41.667 0.00 0.00 0.00 2.24
259 260 5.094134 GGTTCGCTCTAGTACTTGTAGTTG 58.906 45.833 0.00 0.00 0.00 3.16
260 261 5.335504 GGTTCGCTCTAGTACTTGTAGTTGT 60.336 44.000 0.00 0.00 0.00 3.32
261 262 5.542616 TCGCTCTAGTACTTGTAGTTGTC 57.457 43.478 0.00 0.00 0.00 3.18
262 263 4.999311 TCGCTCTAGTACTTGTAGTTGTCA 59.001 41.667 0.00 0.00 0.00 3.58
263 264 5.646793 TCGCTCTAGTACTTGTAGTTGTCAT 59.353 40.000 0.00 0.00 0.00 3.06
264 265 6.150641 TCGCTCTAGTACTTGTAGTTGTCATT 59.849 38.462 0.00 0.00 0.00 2.57
265 266 7.335171 TCGCTCTAGTACTTGTAGTTGTCATTA 59.665 37.037 0.00 0.00 0.00 1.90
266 267 7.640630 CGCTCTAGTACTTGTAGTTGTCATTAG 59.359 40.741 0.00 0.00 0.00 1.73
267 268 7.916450 GCTCTAGTACTTGTAGTTGTCATTAGG 59.084 40.741 0.00 0.00 0.00 2.69
268 269 8.874744 TCTAGTACTTGTAGTTGTCATTAGGT 57.125 34.615 0.00 0.00 0.00 3.08
269 270 8.737175 TCTAGTACTTGTAGTTGTCATTAGGTG 58.263 37.037 0.00 0.00 0.00 4.00
270 271 6.698380 AGTACTTGTAGTTGTCATTAGGTGG 58.302 40.000 0.00 0.00 0.00 4.61
271 272 5.562298 ACTTGTAGTTGTCATTAGGTGGT 57.438 39.130 0.00 0.00 0.00 4.16
272 273 5.548406 ACTTGTAGTTGTCATTAGGTGGTC 58.452 41.667 0.00 0.00 0.00 4.02
273 274 5.071250 ACTTGTAGTTGTCATTAGGTGGTCA 59.929 40.000 0.00 0.00 0.00 4.02
274 275 5.554437 TGTAGTTGTCATTAGGTGGTCAA 57.446 39.130 0.00 0.00 0.00 3.18
275 276 6.121776 TGTAGTTGTCATTAGGTGGTCAAT 57.878 37.500 0.00 0.00 0.00 2.57
276 277 5.937540 TGTAGTTGTCATTAGGTGGTCAATG 59.062 40.000 0.00 0.00 34.17 2.82
277 278 4.335416 AGTTGTCATTAGGTGGTCAATGG 58.665 43.478 0.00 0.00 33.77 3.16
278 279 4.042809 AGTTGTCATTAGGTGGTCAATGGA 59.957 41.667 0.00 0.00 33.77 3.41
279 280 3.950397 TGTCATTAGGTGGTCAATGGAC 58.050 45.455 0.00 0.00 43.55 4.02
280 281 3.329225 TGTCATTAGGTGGTCAATGGACA 59.671 43.478 1.86 0.00 46.17 4.02
281 282 4.018506 TGTCATTAGGTGGTCAATGGACAT 60.019 41.667 1.86 0.00 46.17 3.06
282 283 4.336433 GTCATTAGGTGGTCAATGGACATG 59.664 45.833 1.86 0.00 46.17 3.21
283 284 4.018506 TCATTAGGTGGTCAATGGACATGT 60.019 41.667 0.00 0.00 46.17 3.21
284 285 5.190726 TCATTAGGTGGTCAATGGACATGTA 59.809 40.000 0.00 0.00 46.17 2.29
285 286 5.708736 TTAGGTGGTCAATGGACATGTAT 57.291 39.130 0.00 0.00 46.17 2.29
286 287 3.889815 AGGTGGTCAATGGACATGTATG 58.110 45.455 0.00 0.00 46.17 2.39
287 288 3.523157 AGGTGGTCAATGGACATGTATGA 59.477 43.478 0.00 0.00 46.17 2.15
288 289 4.166725 AGGTGGTCAATGGACATGTATGAT 59.833 41.667 0.00 0.00 46.17 2.45
289 290 4.889409 GGTGGTCAATGGACATGTATGATT 59.111 41.667 0.00 0.00 46.17 2.57
290 291 5.360714 GGTGGTCAATGGACATGTATGATTT 59.639 40.000 0.00 0.00 46.17 2.17
291 292 6.127366 GGTGGTCAATGGACATGTATGATTTT 60.127 38.462 0.00 0.00 46.17 1.82
292 293 7.322664 GTGGTCAATGGACATGTATGATTTTT 58.677 34.615 0.00 0.00 46.17 1.94
293 294 8.465999 GTGGTCAATGGACATGTATGATTTTTA 58.534 33.333 0.00 0.00 46.17 1.52
294 295 8.465999 TGGTCAATGGACATGTATGATTTTTAC 58.534 33.333 0.00 0.00 46.17 2.01
295 296 8.686334 GGTCAATGGACATGTATGATTTTTACT 58.314 33.333 0.00 0.00 46.17 2.24
337 338 9.725019 ACTTTATATTGTCTTGACAGTTGATGA 57.275 29.630 4.21 0.00 0.00 2.92
345 346 9.681692 TTGTCTTGACAGTTGATGAATAAATTG 57.318 29.630 3.61 0.00 0.00 2.32
346 347 9.065798 TGTCTTGACAGTTGATGAATAAATTGA 57.934 29.630 0.00 0.00 0.00 2.57
347 348 9.897744 GTCTTGACAGTTGATGAATAAATTGAA 57.102 29.630 0.00 0.00 0.00 2.69
388 389 8.661352 AACCAAAGAAGACATTAACATTTTGG 57.339 30.769 10.22 10.22 45.36 3.28
389 390 8.017418 ACCAAAGAAGACATTAACATTTTGGA 57.983 30.769 16.81 0.00 43.61 3.53
390 391 8.482128 ACCAAAGAAGACATTAACATTTTGGAA 58.518 29.630 16.81 0.00 43.61 3.53
391 392 8.764287 CCAAAGAAGACATTAACATTTTGGAAC 58.236 33.333 6.79 0.00 43.61 3.62
392 393 9.311916 CAAAGAAGACATTAACATTTTGGAACA 57.688 29.630 0.00 0.00 0.00 3.18
396 397 8.986477 AAGACATTAACATTTTGGAACATAGC 57.014 30.769 0.00 0.00 39.30 2.97
397 398 8.121305 AGACATTAACATTTTGGAACATAGCA 57.879 30.769 0.00 0.00 39.30 3.49
398 399 8.584157 AGACATTAACATTTTGGAACATAGCAA 58.416 29.630 0.00 0.00 39.30 3.91
399 400 9.202273 GACATTAACATTTTGGAACATAGCAAA 57.798 29.630 0.00 0.00 39.30 3.68
400 401 9.206870 ACATTAACATTTTGGAACATAGCAAAG 57.793 29.630 0.00 0.00 39.30 2.77
401 402 7.650834 TTAACATTTTGGAACATAGCAAAGC 57.349 32.000 0.00 0.00 39.30 3.51
402 403 5.212532 ACATTTTGGAACATAGCAAAGCA 57.787 34.783 0.00 0.00 39.30 3.91
403 404 5.609423 ACATTTTGGAACATAGCAAAGCAA 58.391 33.333 0.00 0.00 39.30 3.91
404 405 6.232692 ACATTTTGGAACATAGCAAAGCAAT 58.767 32.000 0.00 0.00 39.30 3.56
405 406 7.385267 ACATTTTGGAACATAGCAAAGCAATA 58.615 30.769 0.00 0.00 39.30 1.90
406 407 8.042515 ACATTTTGGAACATAGCAAAGCAATAT 58.957 29.630 0.00 0.00 39.30 1.28
407 408 7.830940 TTTTGGAACATAGCAAAGCAATATG 57.169 32.000 0.00 0.00 39.30 1.78
408 409 6.528537 TTGGAACATAGCAAAGCAATATGT 57.471 33.333 0.00 0.00 40.86 2.29
409 410 5.893687 TGGAACATAGCAAAGCAATATGTG 58.106 37.500 5.13 0.00 39.46 3.21
410 411 5.651576 TGGAACATAGCAAAGCAATATGTGA 59.348 36.000 5.13 0.00 39.46 3.58
411 412 6.321945 TGGAACATAGCAAAGCAATATGTGAT 59.678 34.615 5.13 0.00 39.46 3.06
412 413 7.147863 TGGAACATAGCAAAGCAATATGTGATT 60.148 33.333 5.13 0.00 39.46 2.57
413 414 7.707893 GGAACATAGCAAAGCAATATGTGATTT 59.292 33.333 5.13 0.00 46.65 2.17
414 415 9.090692 GAACATAGCAAAGCAATATGTGATTTT 57.909 29.630 5.13 0.00 43.22 1.82
415 416 9.439500 AACATAGCAAAGCAATATGTGATTTTT 57.561 25.926 5.13 0.00 43.22 1.94
436 437 4.362932 TTTTCTGCGAAACAACATGTGA 57.637 36.364 0.00 0.00 0.00 3.58
437 438 4.566545 TTTCTGCGAAACAACATGTGAT 57.433 36.364 0.00 0.00 0.00 3.06
438 439 4.566545 TTCTGCGAAACAACATGTGATT 57.433 36.364 0.00 0.00 0.00 2.57
439 440 4.566545 TCTGCGAAACAACATGTGATTT 57.433 36.364 0.00 2.90 0.00 2.17
440 441 4.289342 TCTGCGAAACAACATGTGATTTG 58.711 39.130 11.29 3.33 0.00 2.32
441 442 4.036144 TCTGCGAAACAACATGTGATTTGA 59.964 37.500 11.29 1.96 0.00 2.69
442 443 4.869215 TGCGAAACAACATGTGATTTGAT 58.131 34.783 11.29 0.00 0.00 2.57
443 444 4.680567 TGCGAAACAACATGTGATTTGATG 59.319 37.500 11.29 1.63 0.00 3.07
444 445 4.090354 GCGAAACAACATGTGATTTGATGG 59.910 41.667 11.29 0.00 0.00 3.51
445 446 5.221880 CGAAACAACATGTGATTTGATGGT 58.778 37.500 11.29 0.00 0.00 3.55
446 447 5.691305 CGAAACAACATGTGATTTGATGGTT 59.309 36.000 11.29 3.68 30.53 3.67
447 448 6.860539 CGAAACAACATGTGATTTGATGGTTA 59.139 34.615 11.29 0.00 28.35 2.85
448 449 7.060979 CGAAACAACATGTGATTTGATGGTTAG 59.939 37.037 11.29 1.14 28.35 2.34
449 450 7.523293 AACAACATGTGATTTGATGGTTAGA 57.477 32.000 0.00 0.00 0.00 2.10
450 451 7.707624 ACAACATGTGATTTGATGGTTAGAT 57.292 32.000 0.00 0.00 0.00 1.98
451 452 8.125978 ACAACATGTGATTTGATGGTTAGATT 57.874 30.769 0.00 0.00 0.00 2.40
452 453 8.030692 ACAACATGTGATTTGATGGTTAGATTG 58.969 33.333 0.00 0.00 0.00 2.67
453 454 7.104043 ACATGTGATTTGATGGTTAGATTGG 57.896 36.000 0.00 0.00 0.00 3.16
454 455 6.664816 ACATGTGATTTGATGGTTAGATTGGT 59.335 34.615 0.00 0.00 0.00 3.67
455 456 7.178983 ACATGTGATTTGATGGTTAGATTGGTT 59.821 33.333 0.00 0.00 0.00 3.67
456 457 7.156876 TGTGATTTGATGGTTAGATTGGTTC 57.843 36.000 0.00 0.00 0.00 3.62
457 458 6.718912 TGTGATTTGATGGTTAGATTGGTTCA 59.281 34.615 0.00 0.00 0.00 3.18
458 459 7.029563 GTGATTTGATGGTTAGATTGGTTCAC 58.970 38.462 0.00 0.00 0.00 3.18
459 460 5.621197 TTTGATGGTTAGATTGGTTCACG 57.379 39.130 0.00 0.00 0.00 4.35
460 461 3.605634 TGATGGTTAGATTGGTTCACGG 58.394 45.455 0.00 0.00 0.00 4.94
461 462 3.008594 TGATGGTTAGATTGGTTCACGGT 59.991 43.478 0.00 0.00 0.00 4.83
466 467 5.239087 TGGTTAGATTGGTTCACGGTTTAAC 59.761 40.000 0.00 0.00 0.00 2.01
484 485 2.939460 ACCATAGCATTTTGGAACGC 57.061 45.000 0.00 0.00 36.79 4.84
486 487 2.164219 ACCATAGCATTTTGGAACGCAG 59.836 45.455 0.00 0.00 36.79 5.18
511 513 5.455056 AGAATAGTGTATTGCTAGTCCCG 57.545 43.478 0.00 0.00 35.04 5.14
571 574 2.398554 GCGGTTGATGACGTGGCAT 61.399 57.895 0.00 0.00 0.00 4.40
580 583 6.390721 GTTGATGACGTGGCATCTATATACT 58.609 40.000 16.22 0.00 43.89 2.12
621 625 4.085568 CCACGAAATATCACACGAATCTCG 60.086 45.833 0.00 0.00 46.93 4.04
684 688 5.403766 CCTCAAAGTTATACATAGCTCGCAG 59.596 44.000 0.00 0.00 0.00 5.18
696 700 2.277692 TCGCAGGTCGAATACGCG 60.278 61.111 3.53 3.53 45.36 6.01
697 701 2.578713 CGCAGGTCGAATACGCGT 60.579 61.111 19.17 19.17 40.99 6.01
698 702 1.297819 CGCAGGTCGAATACGCGTA 60.298 57.895 22.94 22.94 40.99 4.42
720 724 6.415280 CGTAGTACTAATTTCTACTGCTGCAG 59.585 42.308 27.02 27.02 37.52 4.41
750 754 4.486125 AAATGGAACTTTTGGCAGTGTT 57.514 36.364 0.00 2.38 0.00 3.32
842 850 1.532868 ACAGCAACTGACATCGAAAGC 59.467 47.619 0.78 0.00 35.18 3.51
870 878 1.962822 CGCTCAGCCTGCACTCAAA 60.963 57.895 0.00 0.00 0.00 2.69
872 880 1.584380 GCTCAGCCTGCACTCAAAGG 61.584 60.000 0.00 0.00 36.58 3.11
877 885 2.298163 CAGCCTGCACTCAAAGGAAAAT 59.702 45.455 0.00 0.00 35.40 1.82
883 891 6.152379 CCTGCACTCAAAGGAAAATAAAGTC 58.848 40.000 0.00 0.00 35.40 3.01
941 949 2.025418 CCCGGTCGAAGTCGGTTTG 61.025 63.158 17.78 3.86 41.72 2.93
950 958 0.601841 AAGTCGGTTTGGTAGTGCCG 60.602 55.000 0.00 0.00 44.95 5.69
952 960 4.364817 CGGTTTGGTAGTGCCGAA 57.635 55.556 0.00 0.00 46.33 4.30
1051 1069 2.219449 ATTAACCGGAGCCCAACCCC 62.219 60.000 9.46 0.00 0.00 4.95
1052 1070 3.876255 TAACCGGAGCCCAACCCCT 62.876 63.158 9.46 0.00 0.00 4.79
1315 1341 2.483745 CTCGCTCCGTCAACGCTA 59.516 61.111 0.00 0.00 38.18 4.26
1381 1407 1.674651 CACGAGGAGGAGGACGACA 60.675 63.158 0.00 0.00 0.00 4.35
1391 1417 2.435059 GGACGACAAGCAGGAGGC 60.435 66.667 0.00 0.00 45.30 4.70
1445 1471 1.226491 CGGTAGCGGAGTTGTACGG 60.226 63.158 6.39 0.00 0.00 4.02
1533 1559 5.897250 GGAGAGGAGGAAGTAGAAAGAGATT 59.103 44.000 0.00 0.00 0.00 2.40
1536 1562 7.878495 AGAGGAGGAAGTAGAAAGAGATTAGA 58.122 38.462 0.00 0.00 0.00 2.10
1668 1701 7.865889 TGTATCGCGTAGATCAAGAAATAATGT 59.134 33.333 5.77 0.00 40.66 2.71
1686 1719 4.550076 ATGTTCTTCTCTTCACAGGAGG 57.450 45.455 0.00 0.00 0.00 4.30
1687 1720 3.309296 TGTTCTTCTCTTCACAGGAGGT 58.691 45.455 0.00 0.00 0.00 3.85
1688 1721 4.480115 TGTTCTTCTCTTCACAGGAGGTA 58.520 43.478 0.00 0.00 0.00 3.08
1855 1895 9.554395 TCTGAATTACAACTGTAGTGATTTTCA 57.446 29.630 0.00 0.00 0.00 2.69
1978 2381 7.382759 GTCTATTCCACCGATTCAATCTTCTAC 59.617 40.741 0.00 0.00 0.00 2.59
1979 2382 5.677319 TTCCACCGATTCAATCTTCTACT 57.323 39.130 0.00 0.00 0.00 2.57
1980 2383 6.785337 TTCCACCGATTCAATCTTCTACTA 57.215 37.500 0.00 0.00 0.00 1.82
2044 2447 1.799121 GGCTGACCGTACGACGAAC 60.799 63.158 18.76 2.84 46.05 3.95
2088 2494 2.437895 TGATCGAGGTCGGCGTCT 60.438 61.111 6.85 5.96 40.29 4.18
2235 2641 4.142138 CCAAGTCTTCCGCATAGTAGTTCT 60.142 45.833 0.00 0.00 0.00 3.01
2243 2649 4.519350 TCCGCATAGTAGTTCTACCATCTG 59.481 45.833 6.39 1.89 0.00 2.90
2261 2667 1.464997 CTGAAAGCGCTTAAGGGTCAC 59.535 52.381 25.33 8.08 0.00 3.67
2271 2677 1.952621 TAAGGGTCACTCAGGAAGGG 58.047 55.000 0.00 0.00 0.00 3.95
2274 2680 0.252284 GGGTCACTCAGGAAGGGAGA 60.252 60.000 0.00 0.00 38.38 3.71
2342 2748 3.204827 CGGCAAGCCCCTCAATCG 61.205 66.667 5.34 0.00 0.00 3.34
2355 2761 2.609459 CCTCAATCGAAATCCCACGAAG 59.391 50.000 0.00 0.00 41.65 3.79
2389 2795 1.376543 ACCGATCGATCTACGTGTGT 58.623 50.000 22.43 0.00 43.13 3.72
2392 2798 2.223180 CCGATCGATCTACGTGTGTTGA 60.223 50.000 22.43 0.00 43.13 3.18
2401 2807 0.529119 ACGTGTGTTGAGAACGGGAC 60.529 55.000 0.00 0.00 41.50 4.46
2408 2814 1.340248 GTTGAGAACGGGACTGTGAGA 59.660 52.381 0.00 0.00 0.00 3.27
2442 2867 4.386711 ACAGATGCATGGTATGAGATGTG 58.613 43.478 2.46 0.00 0.00 3.21
2443 2868 4.141551 ACAGATGCATGGTATGAGATGTGT 60.142 41.667 2.46 0.00 0.00 3.72
2452 2877 4.820173 TGGTATGAGATGTGTAGTACTCCG 59.180 45.833 0.00 0.00 0.00 4.63
2453 2878 5.061853 GGTATGAGATGTGTAGTACTCCGA 58.938 45.833 0.00 0.00 0.00 4.55
2511 2936 6.454848 CGTTCGAGAAAAGAAGATGGAAGATG 60.455 42.308 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.612442 TGGTGGAGGGAGGTGTAGC 60.612 63.158 0.00 0.00 0.00 3.58
1 2 0.544357 TGTGGTGGAGGGAGGTGTAG 60.544 60.000 0.00 0.00 0.00 2.74
2 3 0.544357 CTGTGGTGGAGGGAGGTGTA 60.544 60.000 0.00 0.00 0.00 2.90
3 4 1.843376 CTGTGGTGGAGGGAGGTGT 60.843 63.158 0.00 0.00 0.00 4.16
4 5 2.596851 CCTGTGGTGGAGGGAGGTG 61.597 68.421 0.00 0.00 0.00 4.00
5 6 2.203998 CCTGTGGTGGAGGGAGGT 60.204 66.667 0.00 0.00 0.00 3.85
6 7 1.427072 AAACCTGTGGTGGAGGGAGG 61.427 60.000 0.00 0.00 35.34 4.30
7 8 0.250901 CAAACCTGTGGTGGAGGGAG 60.251 60.000 0.00 0.00 35.34 4.30
8 9 0.991355 ACAAACCTGTGGTGGAGGGA 60.991 55.000 0.00 0.00 35.34 4.20
9 10 0.537371 GACAAACCTGTGGTGGAGGG 60.537 60.000 0.00 0.00 35.34 4.30
10 11 0.474184 AGACAAACCTGTGGTGGAGG 59.526 55.000 0.00 0.00 35.34 4.30
11 12 2.348411 AAGACAAACCTGTGGTGGAG 57.652 50.000 0.00 0.00 35.34 3.86
12 13 2.374184 CAAAGACAAACCTGTGGTGGA 58.626 47.619 0.00 0.00 35.34 4.02
13 14 1.408702 CCAAAGACAAACCTGTGGTGG 59.591 52.381 0.00 0.00 36.90 4.61
14 15 2.869233 CCAAAGACAAACCTGTGGTG 57.131 50.000 0.00 0.00 36.90 4.17
16 17 2.099405 ACACCAAAGACAAACCTGTGG 58.901 47.619 0.00 0.00 45.20 4.17
17 18 5.514274 AATACACCAAAGACAAACCTGTG 57.486 39.130 0.00 0.00 35.30 3.66
18 19 4.274950 CGAATACACCAAAGACAAACCTGT 59.725 41.667 0.00 0.00 38.98 4.00
19 20 4.783242 CGAATACACCAAAGACAAACCTG 58.217 43.478 0.00 0.00 0.00 4.00
20 21 3.252458 GCGAATACACCAAAGACAAACCT 59.748 43.478 0.00 0.00 0.00 3.50
21 22 3.252458 AGCGAATACACCAAAGACAAACC 59.748 43.478 0.00 0.00 0.00 3.27
22 23 4.219033 CAGCGAATACACCAAAGACAAAC 58.781 43.478 0.00 0.00 0.00 2.93
23 24 3.252215 CCAGCGAATACACCAAAGACAAA 59.748 43.478 0.00 0.00 0.00 2.83
24 25 2.811431 CCAGCGAATACACCAAAGACAA 59.189 45.455 0.00 0.00 0.00 3.18
25 26 2.037902 TCCAGCGAATACACCAAAGACA 59.962 45.455 0.00 0.00 0.00 3.41
26 27 2.695359 TCCAGCGAATACACCAAAGAC 58.305 47.619 0.00 0.00 0.00 3.01
27 28 3.531538 GATCCAGCGAATACACCAAAGA 58.468 45.455 0.00 0.00 0.00 2.52
28 29 2.614057 GGATCCAGCGAATACACCAAAG 59.386 50.000 6.95 0.00 0.00 2.77
29 30 2.639065 GGATCCAGCGAATACACCAAA 58.361 47.619 6.95 0.00 0.00 3.28
30 31 1.472552 CGGATCCAGCGAATACACCAA 60.473 52.381 13.41 0.00 0.00 3.67
31 32 0.104120 CGGATCCAGCGAATACACCA 59.896 55.000 13.41 0.00 0.00 4.17
32 33 0.600255 CCGGATCCAGCGAATACACC 60.600 60.000 13.41 0.00 0.00 4.16
33 34 0.104304 ACCGGATCCAGCGAATACAC 59.896 55.000 9.46 0.00 0.00 2.90
34 35 0.387929 GACCGGATCCAGCGAATACA 59.612 55.000 9.46 0.00 0.00 2.29
35 36 0.674534 AGACCGGATCCAGCGAATAC 59.325 55.000 9.46 0.00 0.00 1.89
36 37 1.340248 GAAGACCGGATCCAGCGAATA 59.660 52.381 9.46 0.00 0.00 1.75
37 38 0.105039 GAAGACCGGATCCAGCGAAT 59.895 55.000 9.46 0.00 0.00 3.34
38 39 1.515954 GAAGACCGGATCCAGCGAA 59.484 57.895 9.46 0.00 0.00 4.70
39 40 2.771639 CGAAGACCGGATCCAGCGA 61.772 63.158 9.46 0.00 33.91 4.93
40 41 2.278857 CGAAGACCGGATCCAGCG 60.279 66.667 9.46 0.33 33.91 5.18
41 42 0.806492 GAACGAAGACCGGATCCAGC 60.806 60.000 9.46 0.00 43.93 4.85
42 43 0.525668 CGAACGAAGACCGGATCCAG 60.526 60.000 9.46 2.18 43.93 3.86
43 44 1.246056 ACGAACGAAGACCGGATCCA 61.246 55.000 9.46 0.00 43.93 3.41
44 45 0.525029 GACGAACGAAGACCGGATCC 60.525 60.000 9.46 0.00 43.93 3.36
45 46 0.450983 AGACGAACGAAGACCGGATC 59.549 55.000 9.46 1.42 43.93 3.36
46 47 1.742761 TAGACGAACGAAGACCGGAT 58.257 50.000 9.46 0.00 43.93 4.18
47 48 1.742761 ATAGACGAACGAAGACCGGA 58.257 50.000 9.46 0.00 43.93 5.14
48 49 3.892918 ATATAGACGAACGAAGACCGG 57.107 47.619 0.00 0.00 43.93 5.28
49 50 5.789021 CACATATATAGACGAACGAAGACCG 59.211 44.000 0.14 0.00 45.44 4.79
50 51 6.577800 CACACATATATAGACGAACGAAGACC 59.422 42.308 0.14 0.00 0.00 3.85
51 52 7.111732 CACACACATATATAGACGAACGAAGAC 59.888 40.741 0.14 0.00 0.00 3.01
52 53 7.130269 CACACACATATATAGACGAACGAAGA 58.870 38.462 0.14 0.00 0.00 2.87
53 54 6.910972 ACACACACATATATAGACGAACGAAG 59.089 38.462 0.14 0.00 0.00 3.79
54 55 6.689669 CACACACACATATATAGACGAACGAA 59.310 38.462 0.14 0.00 0.00 3.85
55 56 6.196571 CACACACACATATATAGACGAACGA 58.803 40.000 0.14 0.00 0.00 3.85
56 57 5.108368 GCACACACACATATATAGACGAACG 60.108 44.000 0.00 0.00 0.00 3.95
57 58 5.108368 CGCACACACACATATATAGACGAAC 60.108 44.000 0.00 0.00 0.00 3.95
58 59 4.973663 CGCACACACACATATATAGACGAA 59.026 41.667 0.00 0.00 0.00 3.85
59 60 4.273969 TCGCACACACACATATATAGACGA 59.726 41.667 0.00 0.00 0.00 4.20
60 61 4.533222 TCGCACACACACATATATAGACG 58.467 43.478 0.00 0.00 0.00 4.18
61 62 5.520632 ACTCGCACACACACATATATAGAC 58.479 41.667 0.00 0.00 0.00 2.59
62 63 5.767816 ACTCGCACACACACATATATAGA 57.232 39.130 0.00 0.00 0.00 1.98
63 64 5.175673 CCAACTCGCACACACACATATATAG 59.824 44.000 0.00 0.00 0.00 1.31
64 65 5.047188 CCAACTCGCACACACACATATATA 58.953 41.667 0.00 0.00 0.00 0.86
65 66 3.871006 CCAACTCGCACACACACATATAT 59.129 43.478 0.00 0.00 0.00 0.86
66 67 3.056465 TCCAACTCGCACACACACATATA 60.056 43.478 0.00 0.00 0.00 0.86
67 68 2.076100 CCAACTCGCACACACACATAT 58.924 47.619 0.00 0.00 0.00 1.78
68 69 1.069358 TCCAACTCGCACACACACATA 59.931 47.619 0.00 0.00 0.00 2.29
69 70 0.179059 TCCAACTCGCACACACACAT 60.179 50.000 0.00 0.00 0.00 3.21
70 71 0.179059 ATCCAACTCGCACACACACA 60.179 50.000 0.00 0.00 0.00 3.72
71 72 0.512952 GATCCAACTCGCACACACAC 59.487 55.000 0.00 0.00 0.00 3.82
72 73 0.602638 GGATCCAACTCGCACACACA 60.603 55.000 6.95 0.00 0.00 3.72
73 74 0.320771 AGGATCCAACTCGCACACAC 60.321 55.000 15.82 0.00 0.00 3.82
74 75 0.396435 AAGGATCCAACTCGCACACA 59.604 50.000 15.82 0.00 0.00 3.72
75 76 1.079503 GAAGGATCCAACTCGCACAC 58.920 55.000 15.82 0.00 0.00 3.82
76 77 0.036388 GGAAGGATCCAACTCGCACA 60.036 55.000 15.82 0.00 45.79 4.57
77 78 1.084370 CGGAAGGATCCAACTCGCAC 61.084 60.000 15.82 0.00 46.97 5.34
78 79 1.218047 CGGAAGGATCCAACTCGCA 59.782 57.895 15.82 0.00 46.97 5.10
79 80 4.110493 CGGAAGGATCCAACTCGC 57.890 61.111 15.82 1.53 46.97 5.03
91 92 2.140717 ACAAAAAGCGTAGACCGGAAG 58.859 47.619 9.46 0.00 36.94 3.46
92 93 2.243602 ACAAAAAGCGTAGACCGGAA 57.756 45.000 9.46 0.00 36.94 4.30
93 94 2.137523 GAACAAAAAGCGTAGACCGGA 58.862 47.619 9.46 0.00 36.94 5.14
94 95 1.196127 GGAACAAAAAGCGTAGACCGG 59.804 52.381 0.00 0.00 36.94 5.28
95 96 2.140717 AGGAACAAAAAGCGTAGACCG 58.859 47.619 0.00 0.00 40.40 4.79
96 97 2.157085 CGAGGAACAAAAAGCGTAGACC 59.843 50.000 0.00 0.00 0.00 3.85
97 98 2.157085 CCGAGGAACAAAAAGCGTAGAC 59.843 50.000 0.00 0.00 0.00 2.59
98 99 2.409975 CCGAGGAACAAAAAGCGTAGA 58.590 47.619 0.00 0.00 0.00 2.59
99 100 1.136057 GCCGAGGAACAAAAAGCGTAG 60.136 52.381 0.00 0.00 0.00 3.51
100 101 0.869730 GCCGAGGAACAAAAAGCGTA 59.130 50.000 0.00 0.00 0.00 4.42
101 102 1.652563 GCCGAGGAACAAAAAGCGT 59.347 52.632 0.00 0.00 0.00 5.07
102 103 1.440353 CGCCGAGGAACAAAAAGCG 60.440 57.895 0.00 0.00 35.82 4.68
103 104 1.081442 CCGCCGAGGAACAAAAAGC 60.081 57.895 0.00 0.00 45.00 3.51
104 105 1.081442 GCCGCCGAGGAACAAAAAG 60.081 57.895 0.91 0.00 45.00 2.27
105 106 2.899044 CGCCGCCGAGGAACAAAAA 61.899 57.895 0.91 0.00 45.00 1.94
106 107 3.350612 CGCCGCCGAGGAACAAAA 61.351 61.111 0.91 0.00 45.00 2.44
114 115 4.891727 ATAGCAACCGCCGCCGAG 62.892 66.667 0.00 0.00 39.83 4.63
115 116 4.460683 AATAGCAACCGCCGCCGA 62.461 61.111 0.00 0.00 39.83 5.54
116 117 3.937062 GAATAGCAACCGCCGCCG 61.937 66.667 0.00 0.00 39.83 6.46
117 118 2.513897 AGAATAGCAACCGCCGCC 60.514 61.111 0.00 0.00 39.83 6.13
118 119 2.709475 CAGAATAGCAACCGCCGC 59.291 61.111 0.00 0.00 39.83 6.53
119 120 1.449601 ACCAGAATAGCAACCGCCG 60.450 57.895 0.00 0.00 39.83 6.46
120 121 1.993369 GCACCAGAATAGCAACCGCC 61.993 60.000 0.00 0.00 39.83 6.13
121 122 1.429423 GCACCAGAATAGCAACCGC 59.571 57.895 0.00 0.00 38.99 5.68
122 123 1.705337 CCGCACCAGAATAGCAACCG 61.705 60.000 0.00 0.00 0.00 4.44
123 124 0.676782 ACCGCACCAGAATAGCAACC 60.677 55.000 0.00 0.00 0.00 3.77
124 125 0.447801 CACCGCACCAGAATAGCAAC 59.552 55.000 0.00 0.00 0.00 4.17
125 126 0.036164 ACACCGCACCAGAATAGCAA 59.964 50.000 0.00 0.00 0.00 3.91
126 127 0.899019 TACACCGCACCAGAATAGCA 59.101 50.000 0.00 0.00 0.00 3.49
127 128 1.933853 CTTACACCGCACCAGAATAGC 59.066 52.381 0.00 0.00 0.00 2.97
128 129 2.550978 CCTTACACCGCACCAGAATAG 58.449 52.381 0.00 0.00 0.00 1.73
129 130 1.406341 GCCTTACACCGCACCAGAATA 60.406 52.381 0.00 0.00 0.00 1.75
130 131 0.676782 GCCTTACACCGCACCAGAAT 60.677 55.000 0.00 0.00 0.00 2.40
131 132 1.302192 GCCTTACACCGCACCAGAA 60.302 57.895 0.00 0.00 0.00 3.02
132 133 2.345991 GCCTTACACCGCACCAGA 59.654 61.111 0.00 0.00 0.00 3.86
133 134 2.746277 GGCCTTACACCGCACCAG 60.746 66.667 0.00 0.00 0.00 4.00
134 135 1.481901 TAAGGCCTTACACCGCACCA 61.482 55.000 21.68 0.00 0.00 4.17
135 136 0.743345 CTAAGGCCTTACACCGCACC 60.743 60.000 21.68 0.00 0.00 5.01
136 137 0.036671 ACTAAGGCCTTACACCGCAC 60.037 55.000 21.68 0.00 0.00 5.34
137 138 1.205417 GTACTAAGGCCTTACACCGCA 59.795 52.381 21.68 0.95 0.00 5.69
138 139 1.800286 CGTACTAAGGCCTTACACCGC 60.800 57.143 21.68 8.98 0.00 5.68
139 140 1.745087 TCGTACTAAGGCCTTACACCG 59.255 52.381 21.68 20.37 0.00 4.94
140 141 2.478539 CGTCGTACTAAGGCCTTACACC 60.479 54.545 21.68 10.28 0.00 4.16
141 142 2.420022 TCGTCGTACTAAGGCCTTACAC 59.580 50.000 21.68 19.06 0.00 2.90
142 143 2.420022 GTCGTCGTACTAAGGCCTTACA 59.580 50.000 21.68 9.43 0.00 2.41
143 144 2.680339 AGTCGTCGTACTAAGGCCTTAC 59.320 50.000 21.68 13.72 0.00 2.34
144 145 2.991250 AGTCGTCGTACTAAGGCCTTA 58.009 47.619 23.79 23.79 0.00 2.69
145 146 1.831580 AGTCGTCGTACTAAGGCCTT 58.168 50.000 24.18 24.18 0.00 4.35
146 147 1.742268 GAAGTCGTCGTACTAAGGCCT 59.258 52.381 0.00 0.00 0.00 5.19
147 148 1.742268 AGAAGTCGTCGTACTAAGGCC 59.258 52.381 0.00 0.00 0.00 5.19
148 149 2.223226 GGAGAAGTCGTCGTACTAAGGC 60.223 54.545 0.00 0.00 0.00 4.35
149 150 3.005554 TGGAGAAGTCGTCGTACTAAGG 58.994 50.000 0.00 0.00 0.00 2.69
150 151 3.683822 AGTGGAGAAGTCGTCGTACTAAG 59.316 47.826 0.00 0.00 0.00 2.18
151 152 3.434641 CAGTGGAGAAGTCGTCGTACTAA 59.565 47.826 0.00 0.00 0.00 2.24
152 153 2.998670 CAGTGGAGAAGTCGTCGTACTA 59.001 50.000 0.00 0.00 0.00 1.82
153 154 1.805345 CAGTGGAGAAGTCGTCGTACT 59.195 52.381 0.00 0.00 0.00 2.73
154 155 1.534595 ACAGTGGAGAAGTCGTCGTAC 59.465 52.381 0.00 0.00 0.00 3.67
155 156 1.802960 GACAGTGGAGAAGTCGTCGTA 59.197 52.381 0.00 0.00 0.00 3.43
156 157 0.592148 GACAGTGGAGAAGTCGTCGT 59.408 55.000 0.00 0.00 0.00 4.34
157 158 0.875728 AGACAGTGGAGAAGTCGTCG 59.124 55.000 0.00 0.00 37.36 5.12
158 159 1.667467 GCAGACAGTGGAGAAGTCGTC 60.667 57.143 0.00 0.00 37.36 4.20
159 160 0.315568 GCAGACAGTGGAGAAGTCGT 59.684 55.000 0.00 0.00 37.36 4.34
160 161 0.600557 AGCAGACAGTGGAGAAGTCG 59.399 55.000 0.00 0.00 37.36 4.18
161 162 2.558795 TGTAGCAGACAGTGGAGAAGTC 59.441 50.000 0.00 0.00 32.86 3.01
162 163 2.598565 TGTAGCAGACAGTGGAGAAGT 58.401 47.619 0.00 0.00 32.86 3.01
163 164 3.667497 TTGTAGCAGACAGTGGAGAAG 57.333 47.619 0.00 0.00 39.88 2.85
164 165 5.738619 TTATTGTAGCAGACAGTGGAGAA 57.261 39.130 0.00 0.00 39.88 2.87
165 166 5.187772 ACATTATTGTAGCAGACAGTGGAGA 59.812 40.000 0.00 0.00 39.88 3.71
166 167 5.423015 ACATTATTGTAGCAGACAGTGGAG 58.577 41.667 0.00 0.00 39.88 3.86
167 168 5.420725 ACATTATTGTAGCAGACAGTGGA 57.579 39.130 0.00 0.00 39.88 4.02
168 169 6.317088 CAAACATTATTGTAGCAGACAGTGG 58.683 40.000 0.00 0.00 39.88 4.00
169 170 5.796935 GCAAACATTATTGTAGCAGACAGTG 59.203 40.000 9.11 0.00 39.88 3.66
170 171 5.106157 GGCAAACATTATTGTAGCAGACAGT 60.106 40.000 13.63 0.00 39.88 3.55
171 172 5.124457 AGGCAAACATTATTGTAGCAGACAG 59.876 40.000 13.63 0.00 39.88 3.51
172 173 5.009631 AGGCAAACATTATTGTAGCAGACA 58.990 37.500 13.63 0.00 38.23 3.41
173 174 5.335127 CAGGCAAACATTATTGTAGCAGAC 58.665 41.667 13.63 0.00 38.23 3.51
174 175 4.398988 CCAGGCAAACATTATTGTAGCAGA 59.601 41.667 13.63 0.00 38.23 4.26
175 176 4.675510 CCAGGCAAACATTATTGTAGCAG 58.324 43.478 13.63 7.86 38.23 4.24
176 177 3.119173 GCCAGGCAAACATTATTGTAGCA 60.119 43.478 6.55 0.00 38.23 3.49
177 178 3.131046 AGCCAGGCAAACATTATTGTAGC 59.869 43.478 15.80 6.58 34.06 3.58
178 179 4.398988 TGAGCCAGGCAAACATTATTGTAG 59.601 41.667 15.80 0.00 34.06 2.74
179 180 4.339748 TGAGCCAGGCAAACATTATTGTA 58.660 39.130 15.80 0.00 34.06 2.41
180 181 3.164268 TGAGCCAGGCAAACATTATTGT 58.836 40.909 15.80 0.00 37.82 2.71
181 182 3.444742 TCTGAGCCAGGCAAACATTATTG 59.555 43.478 15.80 0.00 31.51 1.90
182 183 3.700538 TCTGAGCCAGGCAAACATTATT 58.299 40.909 15.80 0.00 31.51 1.40
183 184 3.370840 TCTGAGCCAGGCAAACATTAT 57.629 42.857 15.80 0.00 31.51 1.28
184 185 2.877097 TCTGAGCCAGGCAAACATTA 57.123 45.000 15.80 0.00 31.51 1.90
185 186 1.822990 CATCTGAGCCAGGCAAACATT 59.177 47.619 15.80 0.00 31.51 2.71
186 187 1.005097 TCATCTGAGCCAGGCAAACAT 59.995 47.619 15.80 0.00 31.51 2.71
187 188 0.401356 TCATCTGAGCCAGGCAAACA 59.599 50.000 15.80 9.88 31.51 2.83
188 189 1.471684 CTTCATCTGAGCCAGGCAAAC 59.528 52.381 15.80 5.24 31.51 2.93
189 190 1.615116 CCTTCATCTGAGCCAGGCAAA 60.615 52.381 15.80 0.00 31.51 3.68
190 191 0.034767 CCTTCATCTGAGCCAGGCAA 60.035 55.000 15.80 0.00 31.51 4.52
191 192 0.911045 TCCTTCATCTGAGCCAGGCA 60.911 55.000 15.80 0.00 31.51 4.75
192 193 0.179051 CTCCTTCATCTGAGCCAGGC 60.179 60.000 1.84 1.84 31.51 4.85
193 194 0.469070 CCTCCTTCATCTGAGCCAGG 59.531 60.000 2.86 0.00 31.51 4.45
194 195 0.469070 CCCTCCTTCATCTGAGCCAG 59.531 60.000 0.00 0.00 0.00 4.85
195 196 0.043183 TCCCTCCTTCATCTGAGCCA 59.957 55.000 0.00 0.00 0.00 4.75
196 197 0.467804 GTCCCTCCTTCATCTGAGCC 59.532 60.000 0.00 0.00 0.00 4.70
197 198 1.198713 TGTCCCTCCTTCATCTGAGC 58.801 55.000 0.00 0.00 0.00 4.26
198 199 3.806380 CATTGTCCCTCCTTCATCTGAG 58.194 50.000 0.00 0.00 0.00 3.35
199 200 2.092753 GCATTGTCCCTCCTTCATCTGA 60.093 50.000 0.00 0.00 0.00 3.27
200 201 2.295885 GCATTGTCCCTCCTTCATCTG 58.704 52.381 0.00 0.00 0.00 2.90
201 202 1.213926 GGCATTGTCCCTCCTTCATCT 59.786 52.381 0.00 0.00 0.00 2.90
202 203 1.213926 AGGCATTGTCCCTCCTTCATC 59.786 52.381 0.00 0.00 0.00 2.92
203 204 1.064166 CAGGCATTGTCCCTCCTTCAT 60.064 52.381 0.00 0.00 0.00 2.57
204 205 0.329261 CAGGCATTGTCCCTCCTTCA 59.671 55.000 0.00 0.00 0.00 3.02
205 206 1.034292 GCAGGCATTGTCCCTCCTTC 61.034 60.000 0.00 0.00 0.00 3.46
206 207 1.000396 GCAGGCATTGTCCCTCCTT 60.000 57.895 0.00 0.00 0.00 3.36
207 208 1.792757 TTGCAGGCATTGTCCCTCCT 61.793 55.000 0.00 0.00 0.00 3.69
208 209 0.685458 ATTGCAGGCATTGTCCCTCC 60.685 55.000 0.00 0.00 0.00 4.30
209 210 0.458669 CATTGCAGGCATTGTCCCTC 59.541 55.000 7.74 0.00 0.00 4.30
210 211 1.610554 GCATTGCAGGCATTGTCCCT 61.611 55.000 15.14 0.00 32.01 4.20
211 212 1.153509 GCATTGCAGGCATTGTCCC 60.154 57.895 15.14 0.00 32.01 4.46
212 213 0.738412 GTGCATTGCAGGCATTGTCC 60.738 55.000 12.53 2.12 44.11 4.02
213 214 0.738412 GGTGCATTGCAGGCATTGTC 60.738 55.000 12.53 5.55 44.11 3.18
214 215 1.189524 AGGTGCATTGCAGGCATTGT 61.190 50.000 12.53 3.99 44.11 2.71
215 216 0.036765 AAGGTGCATTGCAGGCATTG 60.037 50.000 12.53 10.83 44.11 2.82
216 217 0.688487 AAAGGTGCATTGCAGGCATT 59.312 45.000 12.53 2.29 44.11 3.56
217 218 0.036765 CAAAGGTGCATTGCAGGCAT 60.037 50.000 12.53 0.00 44.11 4.40
218 219 1.368209 CAAAGGTGCATTGCAGGCA 59.632 52.632 12.53 10.67 40.08 4.75
219 220 1.375013 CCAAAGGTGCATTGCAGGC 60.375 57.895 12.53 0.66 40.08 4.85
220 221 0.393820 AACCAAAGGTGCATTGCAGG 59.606 50.000 12.53 11.76 40.08 4.85
221 222 1.787012 GAACCAAAGGTGCATTGCAG 58.213 50.000 12.53 1.43 40.08 4.41
222 223 0.031857 CGAACCAAAGGTGCATTGCA 59.968 50.000 7.38 7.38 35.34 4.08
223 224 1.284297 GCGAACCAAAGGTGCATTGC 61.284 55.000 0.46 0.46 35.34 3.56
224 225 0.314935 AGCGAACCAAAGGTGCATTG 59.685 50.000 0.00 0.00 35.34 2.82
225 226 0.598065 GAGCGAACCAAAGGTGCATT 59.402 50.000 0.00 0.00 35.34 3.56
226 227 0.250901 AGAGCGAACCAAAGGTGCAT 60.251 50.000 0.00 0.00 35.34 3.96
227 228 0.394938 TAGAGCGAACCAAAGGTGCA 59.605 50.000 0.00 0.00 35.34 4.57
228 229 1.079503 CTAGAGCGAACCAAAGGTGC 58.920 55.000 0.00 0.00 35.34 5.01
229 230 2.457366 ACTAGAGCGAACCAAAGGTG 57.543 50.000 0.00 0.00 35.34 4.00
230 231 3.163467 AGTACTAGAGCGAACCAAAGGT 58.837 45.455 0.00 0.00 37.65 3.50
231 232 3.870633 AGTACTAGAGCGAACCAAAGG 57.129 47.619 0.00 0.00 0.00 3.11
232 233 4.557205 ACAAGTACTAGAGCGAACCAAAG 58.443 43.478 0.00 0.00 0.00 2.77
233 234 4.595762 ACAAGTACTAGAGCGAACCAAA 57.404 40.909 0.00 0.00 0.00 3.28
234 235 4.763793 ACTACAAGTACTAGAGCGAACCAA 59.236 41.667 0.00 0.00 0.00 3.67
235 236 4.330250 ACTACAAGTACTAGAGCGAACCA 58.670 43.478 0.00 0.00 0.00 3.67
236 237 4.961435 ACTACAAGTACTAGAGCGAACC 57.039 45.455 0.00 0.00 0.00 3.62
237 238 5.697826 ACAACTACAAGTACTAGAGCGAAC 58.302 41.667 0.00 0.00 0.00 3.95
238 239 5.471116 TGACAACTACAAGTACTAGAGCGAA 59.529 40.000 0.00 0.00 0.00 4.70
239 240 4.999311 TGACAACTACAAGTACTAGAGCGA 59.001 41.667 0.00 0.00 0.00 4.93
240 241 5.292671 TGACAACTACAAGTACTAGAGCG 57.707 43.478 0.00 0.00 0.00 5.03
241 242 7.916450 CCTAATGACAACTACAAGTACTAGAGC 59.084 40.741 0.00 0.00 0.00 4.09
242 243 8.958506 ACCTAATGACAACTACAAGTACTAGAG 58.041 37.037 0.00 0.00 0.00 2.43
243 244 8.737175 CACCTAATGACAACTACAAGTACTAGA 58.263 37.037 0.00 0.00 0.00 2.43
244 245 7.974501 CCACCTAATGACAACTACAAGTACTAG 59.025 40.741 0.00 0.00 0.00 2.57
245 246 7.452501 ACCACCTAATGACAACTACAAGTACTA 59.547 37.037 0.00 0.00 0.00 1.82
246 247 6.269307 ACCACCTAATGACAACTACAAGTACT 59.731 38.462 0.00 0.00 0.00 2.73
247 248 6.461640 ACCACCTAATGACAACTACAAGTAC 58.538 40.000 0.00 0.00 0.00 2.73
248 249 6.268158 TGACCACCTAATGACAACTACAAGTA 59.732 38.462 0.00 0.00 0.00 2.24
249 250 5.071250 TGACCACCTAATGACAACTACAAGT 59.929 40.000 0.00 0.00 0.00 3.16
250 251 5.547465 TGACCACCTAATGACAACTACAAG 58.453 41.667 0.00 0.00 0.00 3.16
251 252 5.554437 TGACCACCTAATGACAACTACAA 57.446 39.130 0.00 0.00 0.00 2.41
252 253 5.554437 TTGACCACCTAATGACAACTACA 57.446 39.130 0.00 0.00 0.00 2.74
253 254 5.354234 CCATTGACCACCTAATGACAACTAC 59.646 44.000 0.00 0.00 36.61 2.73
254 255 5.249622 TCCATTGACCACCTAATGACAACTA 59.750 40.000 0.00 0.00 36.61 2.24
255 256 4.042809 TCCATTGACCACCTAATGACAACT 59.957 41.667 0.00 0.00 36.61 3.16
256 257 4.156008 GTCCATTGACCACCTAATGACAAC 59.844 45.833 0.00 0.00 36.61 3.32
257 258 4.202514 TGTCCATTGACCACCTAATGACAA 60.203 41.667 0.00 0.00 41.01 3.18
258 259 3.329225 TGTCCATTGACCACCTAATGACA 59.671 43.478 0.00 0.00 41.01 3.58
259 260 3.950397 TGTCCATTGACCACCTAATGAC 58.050 45.455 0.00 0.00 41.01 3.06
260 261 4.018506 ACATGTCCATTGACCACCTAATGA 60.019 41.667 0.00 0.00 41.01 2.57
261 262 4.272489 ACATGTCCATTGACCACCTAATG 58.728 43.478 0.00 0.00 41.01 1.90
262 263 4.591321 ACATGTCCATTGACCACCTAAT 57.409 40.909 0.00 0.00 41.01 1.73
263 264 5.190726 TCATACATGTCCATTGACCACCTAA 59.809 40.000 0.00 0.00 41.01 2.69
264 265 4.719273 TCATACATGTCCATTGACCACCTA 59.281 41.667 0.00 0.00 41.01 3.08
265 266 3.523157 TCATACATGTCCATTGACCACCT 59.477 43.478 0.00 0.00 41.01 4.00
266 267 3.884895 TCATACATGTCCATTGACCACC 58.115 45.455 0.00 0.00 41.01 4.61
267 268 6.455360 AAATCATACATGTCCATTGACCAC 57.545 37.500 0.00 0.00 41.01 4.16
268 269 7.479352 AAAAATCATACATGTCCATTGACCA 57.521 32.000 0.00 0.00 41.01 4.02
269 270 8.686334 AGTAAAAATCATACATGTCCATTGACC 58.314 33.333 0.00 0.00 41.01 4.02
311 312 9.725019 TCATCAACTGTCAAGACAATATAAAGT 57.275 29.630 4.29 0.00 41.33 2.66
319 320 9.681692 CAATTTATTCATCAACTGTCAAGACAA 57.318 29.630 4.29 0.00 41.33 3.18
320 321 9.065798 TCAATTTATTCATCAACTGTCAAGACA 57.934 29.630 2.56 2.56 39.32 3.41
321 322 9.897744 TTCAATTTATTCATCAACTGTCAAGAC 57.102 29.630 0.00 0.00 0.00 3.01
362 363 9.108284 CCAAAATGTTAATGTCTTCTTTGGTTT 57.892 29.630 0.00 0.00 37.72 3.27
363 364 8.482128 TCCAAAATGTTAATGTCTTCTTTGGTT 58.518 29.630 9.40 0.00 41.39 3.67
364 365 8.017418 TCCAAAATGTTAATGTCTTCTTTGGT 57.983 30.769 9.40 0.00 41.39 3.67
365 366 8.764287 GTTCCAAAATGTTAATGTCTTCTTTGG 58.236 33.333 4.27 4.27 41.80 3.28
366 367 9.311916 TGTTCCAAAATGTTAATGTCTTCTTTG 57.688 29.630 0.00 0.00 0.00 2.77
370 371 9.076596 GCTATGTTCCAAAATGTTAATGTCTTC 57.923 33.333 0.00 0.00 0.00 2.87
371 372 8.584157 TGCTATGTTCCAAAATGTTAATGTCTT 58.416 29.630 0.00 0.00 0.00 3.01
372 373 8.121305 TGCTATGTTCCAAAATGTTAATGTCT 57.879 30.769 0.00 0.00 0.00 3.41
373 374 8.755696 TTGCTATGTTCCAAAATGTTAATGTC 57.244 30.769 0.00 0.00 0.00 3.06
374 375 9.206870 CTTTGCTATGTTCCAAAATGTTAATGT 57.793 29.630 0.00 0.00 31.29 2.71
375 376 8.170553 GCTTTGCTATGTTCCAAAATGTTAATG 58.829 33.333 0.00 0.00 31.29 1.90
376 377 7.877097 TGCTTTGCTATGTTCCAAAATGTTAAT 59.123 29.630 0.00 0.00 31.29 1.40
377 378 7.212976 TGCTTTGCTATGTTCCAAAATGTTAA 58.787 30.769 0.00 0.00 31.29 2.01
378 379 6.753180 TGCTTTGCTATGTTCCAAAATGTTA 58.247 32.000 0.00 0.00 31.29 2.41
379 380 5.609423 TGCTTTGCTATGTTCCAAAATGTT 58.391 33.333 0.00 0.00 31.29 2.71
380 381 5.212532 TGCTTTGCTATGTTCCAAAATGT 57.787 34.783 0.00 0.00 31.29 2.71
381 382 6.730960 ATTGCTTTGCTATGTTCCAAAATG 57.269 33.333 0.00 0.00 31.29 2.32
382 383 8.042515 ACATATTGCTTTGCTATGTTCCAAAAT 58.957 29.630 0.00 0.00 33.42 1.82
383 384 7.331440 CACATATTGCTTTGCTATGTTCCAAAA 59.669 33.333 2.94 0.00 34.66 2.44
384 385 6.812656 CACATATTGCTTTGCTATGTTCCAAA 59.187 34.615 2.94 0.00 34.66 3.28
385 386 6.152492 TCACATATTGCTTTGCTATGTTCCAA 59.848 34.615 2.94 0.00 34.66 3.53
386 387 5.651576 TCACATATTGCTTTGCTATGTTCCA 59.348 36.000 2.94 0.00 34.66 3.53
387 388 6.135290 TCACATATTGCTTTGCTATGTTCC 57.865 37.500 2.94 0.00 34.66 3.62
388 389 8.638685 AAATCACATATTGCTTTGCTATGTTC 57.361 30.769 2.94 0.00 34.66 3.18
389 390 9.439500 AAAAATCACATATTGCTTTGCTATGTT 57.561 25.926 2.94 0.00 34.66 2.71
414 415 4.738124 TCACATGTTGTTTCGCAGAAAAA 58.262 34.783 0.00 0.00 45.90 1.94
415 416 4.362932 TCACATGTTGTTTCGCAGAAAA 57.637 36.364 0.00 0.00 45.90 2.29
416 417 4.566545 ATCACATGTTGTTTCGCAGAAA 57.433 36.364 0.00 0.55 45.90 2.52
417 418 4.566545 AATCACATGTTGTTTCGCAGAA 57.433 36.364 0.00 0.00 45.90 3.02
418 419 4.036144 TCAAATCACATGTTGTTTCGCAGA 59.964 37.500 0.00 0.00 0.00 4.26
419 420 4.289342 TCAAATCACATGTTGTTTCGCAG 58.711 39.130 0.00 0.00 0.00 5.18
420 421 4.298744 TCAAATCACATGTTGTTTCGCA 57.701 36.364 0.00 0.00 0.00 5.10
421 422 4.090354 CCATCAAATCACATGTTGTTTCGC 59.910 41.667 0.00 0.00 0.00 4.70
422 423 5.221880 ACCATCAAATCACATGTTGTTTCG 58.778 37.500 0.00 0.00 0.00 3.46
423 424 8.081633 TCTAACCATCAAATCACATGTTGTTTC 58.918 33.333 0.00 0.00 0.00 2.78
424 425 7.950512 TCTAACCATCAAATCACATGTTGTTT 58.049 30.769 0.00 0.00 0.00 2.83
425 426 7.523293 TCTAACCATCAAATCACATGTTGTT 57.477 32.000 0.00 0.00 0.00 2.83
426 427 7.707624 ATCTAACCATCAAATCACATGTTGT 57.292 32.000 0.00 0.00 0.00 3.32
427 428 7.490079 CCAATCTAACCATCAAATCACATGTTG 59.510 37.037 0.00 0.00 0.00 3.33
428 429 7.178983 ACCAATCTAACCATCAAATCACATGTT 59.821 33.333 0.00 0.00 0.00 2.71
429 430 6.664816 ACCAATCTAACCATCAAATCACATGT 59.335 34.615 0.00 0.00 0.00 3.21
430 431 7.104043 ACCAATCTAACCATCAAATCACATG 57.896 36.000 0.00 0.00 0.00 3.21
431 432 7.396907 TGAACCAATCTAACCATCAAATCACAT 59.603 33.333 0.00 0.00 0.00 3.21
432 433 6.718912 TGAACCAATCTAACCATCAAATCACA 59.281 34.615 0.00 0.00 0.00 3.58
433 434 7.029563 GTGAACCAATCTAACCATCAAATCAC 58.970 38.462 0.00 0.00 0.00 3.06
434 435 6.128035 CGTGAACCAATCTAACCATCAAATCA 60.128 38.462 0.00 0.00 0.00 2.57
435 436 6.258160 CGTGAACCAATCTAACCATCAAATC 58.742 40.000 0.00 0.00 0.00 2.17
436 437 5.125417 CCGTGAACCAATCTAACCATCAAAT 59.875 40.000 0.00 0.00 0.00 2.32
437 438 4.457603 CCGTGAACCAATCTAACCATCAAA 59.542 41.667 0.00 0.00 0.00 2.69
438 439 4.006989 CCGTGAACCAATCTAACCATCAA 58.993 43.478 0.00 0.00 0.00 2.57
439 440 3.008594 ACCGTGAACCAATCTAACCATCA 59.991 43.478 0.00 0.00 0.00 3.07
440 441 3.606687 ACCGTGAACCAATCTAACCATC 58.393 45.455 0.00 0.00 0.00 3.51
441 442 3.713826 ACCGTGAACCAATCTAACCAT 57.286 42.857 0.00 0.00 0.00 3.55
442 443 3.495434 AACCGTGAACCAATCTAACCA 57.505 42.857 0.00 0.00 0.00 3.67
443 444 5.335113 GGTTAAACCGTGAACCAATCTAACC 60.335 44.000 9.71 0.00 43.91 2.85
444 445 5.692814 GGTTAAACCGTGAACCAATCTAAC 58.307 41.667 9.71 0.00 43.91 2.34
445 446 5.945466 GGTTAAACCGTGAACCAATCTAA 57.055 39.130 9.71 0.00 43.91 2.10
452 453 3.075884 TGCTATGGTTAAACCGTGAACC 58.924 45.455 8.18 8.18 42.58 3.62
453 454 4.957759 ATGCTATGGTTAAACCGTGAAC 57.042 40.909 0.00 0.00 42.58 3.18
454 455 5.968528 AAATGCTATGGTTAAACCGTGAA 57.031 34.783 0.00 0.00 42.58 3.18
455 456 5.336055 CCAAAATGCTATGGTTAAACCGTGA 60.336 40.000 0.00 0.00 42.58 4.35
456 457 4.862018 CCAAAATGCTATGGTTAAACCGTG 59.138 41.667 0.00 0.00 42.58 4.94
457 458 4.767928 TCCAAAATGCTATGGTTAAACCGT 59.232 37.500 0.00 0.00 42.58 4.83
458 459 5.317733 TCCAAAATGCTATGGTTAAACCG 57.682 39.130 0.00 0.00 42.58 4.44
459 460 5.575218 CGTTCCAAAATGCTATGGTTAAACC 59.425 40.000 0.00 0.00 37.94 3.27
460 461 5.061684 GCGTTCCAAAATGCTATGGTTAAAC 59.938 40.000 0.00 0.00 42.92 2.01
461 462 5.164954 GCGTTCCAAAATGCTATGGTTAAA 58.835 37.500 0.00 0.00 42.92 1.52
466 467 2.480073 CCTGCGTTCCAAAATGCTATGG 60.480 50.000 4.22 0.00 45.80 2.74
469 470 2.192664 TCCTGCGTTCCAAAATGCTA 57.807 45.000 4.22 0.00 45.80 3.49
471 472 1.269448 TCTTCCTGCGTTCCAAAATGC 59.731 47.619 0.00 0.00 45.81 3.56
484 485 6.926272 GGACTAGCAATACACTATTCTTCCTG 59.074 42.308 0.00 0.00 0.00 3.86
486 487 6.224584 GGGACTAGCAATACACTATTCTTCC 58.775 44.000 0.00 0.00 0.00 3.46
511 513 2.364710 AGGTACACGGTAGGGCCC 60.365 66.667 16.46 16.46 0.00 5.80
522 524 0.682292 TGTGCAATCGACCAGGTACA 59.318 50.000 0.00 0.00 0.00 2.90
558 560 5.125578 GGAGTATATAGATGCCACGTCATCA 59.874 44.000 16.82 2.25 43.94 3.07
684 688 4.452890 TTAGTACTACGCGTATTCGACC 57.547 45.455 20.91 5.04 39.71 4.79
696 700 7.481642 TCTGCAGCAGTAGAAATTAGTACTAC 58.518 38.462 22.10 0.00 33.31 2.73
697 701 7.640597 TCTGCAGCAGTAGAAATTAGTACTA 57.359 36.000 22.10 0.00 33.31 1.82
698 702 6.531503 TCTGCAGCAGTAGAAATTAGTACT 57.468 37.500 22.10 0.00 33.31 2.73
720 724 6.928492 TGCCAAAAGTTCCATTTTGTAGAATC 59.072 34.615 10.13 0.00 44.85 2.52
842 850 2.202623 GCTGAGCGTAGTGGTCCG 60.203 66.667 0.00 0.00 44.62 4.79
856 864 1.321474 TTTCCTTTGAGTGCAGGCTG 58.679 50.000 10.94 10.94 0.00 4.85
870 878 3.010420 GCTGAGCGGACTTTATTTTCCT 58.990 45.455 0.00 0.00 0.00 3.36
872 880 2.097629 GGGCTGAGCGGACTTTATTTTC 59.902 50.000 0.00 0.00 0.00 2.29
877 885 2.666098 GGGGGCTGAGCGGACTTTA 61.666 63.158 0.00 0.00 0.00 1.85
900 908 4.387862 GGTGCATGCAGAATTTCAAGAAAG 59.612 41.667 23.41 0.00 33.32 2.62
908 916 1.606885 CCGGGGTGCATGCAGAATTT 61.607 55.000 23.41 0.00 0.00 1.82
964 972 2.601763 GCTAAGGTTAATCGTGTGGTCG 59.398 50.000 0.00 0.00 0.00 4.79
965 973 2.934553 GGCTAAGGTTAATCGTGTGGTC 59.065 50.000 0.00 0.00 0.00 4.02
967 975 2.285977 GGGCTAAGGTTAATCGTGTGG 58.714 52.381 0.00 0.00 0.00 4.17
1015 1025 4.246458 GTTAATTTCGTGTGCCTCTCTCT 58.754 43.478 0.00 0.00 0.00 3.10
1066 1085 2.227194 CGGTGGTTTGCTTCTTAGGTT 58.773 47.619 0.00 0.00 0.00 3.50
1072 1091 2.597510 GGCCGGTGGTTTGCTTCT 60.598 61.111 1.90 0.00 0.00 2.85
1106 1132 4.201122 GGAGGGCCTGCTCCATGG 62.201 72.222 18.93 4.97 39.45 3.66
1351 1377 4.847516 CTCGTGATCCGCGCCGAA 62.848 66.667 0.00 0.00 37.28 4.30
1499 1525 1.394151 CTCCTCTCCTCCCTTGGGT 59.606 63.158 5.51 0.00 0.00 4.51
1501 1527 0.043334 TTCCTCCTCTCCTCCCTTGG 59.957 60.000 0.00 0.00 0.00 3.61
1505 1531 1.854280 TCTACTTCCTCCTCTCCTCCC 59.146 57.143 0.00 0.00 0.00 4.30
1536 1562 1.729586 TTACAGGCAAGAGTGACCCT 58.270 50.000 0.00 0.00 30.22 4.34
1668 1701 4.999310 TCTACCTCCTGTGAAGAGAAGAA 58.001 43.478 0.00 0.00 32.86 2.52
1686 1719 9.108284 CCTAACTAACTACCTTAGTGACTCTAC 57.892 40.741 0.00 0.00 43.78 2.59
1687 1720 9.051259 TCCTAACTAACTACCTTAGTGACTCTA 57.949 37.037 0.00 0.00 43.78 2.43
1688 1721 7.926705 TCCTAACTAACTACCTTAGTGACTCT 58.073 38.462 0.00 0.00 43.78 3.24
1743 1776 6.374417 TCCTGGTTTATTGAAGACTAGCTT 57.626 37.500 0.00 0.00 40.25 3.74
1754 1789 7.489113 GCACAAGTTATTCATCCTGGTTTATTG 59.511 37.037 0.00 0.00 0.00 1.90
1773 1808 2.095059 GCAAATCGATCCAAGCACAAGT 60.095 45.455 0.00 0.00 0.00 3.16
1853 1893 8.581578 TGATAAATCACTACAGTACAGTGTTGA 58.418 33.333 0.00 8.42 43.21 3.18
1854 1894 8.757164 TGATAAATCACTACAGTACAGTGTTG 57.243 34.615 0.00 0.00 43.21 3.33
1978 2381 9.578306 CTGATCGTTTGTACTAGTAATACGTAG 57.422 37.037 21.84 17.02 0.00 3.51
1979 2382 8.064222 GCTGATCGTTTGTACTAGTAATACGTA 58.936 37.037 21.84 0.00 0.00 3.57
1980 2383 6.909357 GCTGATCGTTTGTACTAGTAATACGT 59.091 38.462 21.84 14.35 0.00 3.57
2029 2432 1.078709 CTAGGTTCGTCGTACGGTCA 58.921 55.000 16.52 0.00 42.81 4.02
2044 2447 3.675563 CGCCCGGAGCTAGCTAGG 61.676 72.222 24.52 24.52 40.39 3.02
2088 2494 1.306911 TGCCATGTCCTGCCTCCTA 60.307 57.895 0.00 0.00 0.00 2.94
2235 2641 3.531538 CCTTAAGCGCTTTCAGATGGTA 58.468 45.455 30.13 3.22 0.00 3.25
2243 2649 1.732809 GAGTGACCCTTAAGCGCTTTC 59.267 52.381 30.13 19.37 0.00 2.62
2261 2667 3.056179 GTCTTTCTGTCTCCCTTCCTGAG 60.056 52.174 0.00 0.00 0.00 3.35
2271 2677 7.273815 CGTAACCTATCTTTGTCTTTCTGTCTC 59.726 40.741 0.00 0.00 0.00 3.36
2274 2680 6.989659 TCGTAACCTATCTTTGTCTTTCTGT 58.010 36.000 0.00 0.00 0.00 3.41
2307 2713 1.696063 CGCCCCAATTTCATCCAGAT 58.304 50.000 0.00 0.00 0.00 2.90
2335 2741 3.521560 TCTTCGTGGGATTTCGATTGAG 58.478 45.455 0.00 0.00 36.01 3.02
2342 2748 4.217550 TGGTCATTTTCTTCGTGGGATTTC 59.782 41.667 0.00 0.00 0.00 2.17
2355 2761 3.001330 CGATCGGTAGCTTGGTCATTTTC 59.999 47.826 7.38 0.00 0.00 2.29
2389 2795 1.699730 TCTCACAGTCCCGTTCTCAA 58.300 50.000 0.00 0.00 0.00 3.02
2392 2798 3.553828 TTTTTCTCACAGTCCCGTTCT 57.446 42.857 0.00 0.00 0.00 3.01
2442 2867 4.701765 TCACTACTGGATCGGAGTACTAC 58.298 47.826 0.00 0.00 0.00 2.73
2443 2868 5.363562 TTCACTACTGGATCGGAGTACTA 57.636 43.478 0.00 0.00 0.00 1.82
2452 2877 7.206687 CACCTTCTAGAATTCACTACTGGATC 58.793 42.308 5.44 0.00 0.00 3.36
2453 2878 6.407525 GCACCTTCTAGAATTCACTACTGGAT 60.408 42.308 5.44 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.