Multiple sequence alignment - TraesCS7B01G168300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G168300 chr7B 100.000 3232 0 0 1 3232 235451208 235447977 0.000000e+00 5969.0
1 TraesCS7B01G168300 chr7B 89.241 158 17 0 2788 2945 276733031 276732874 7.070000e-47 198.0
2 TraesCS7B01G168300 chr7A 96.635 2110 62 6 179 2284 276187055 276184951 0.000000e+00 3494.0
3 TraesCS7B01G168300 chr7A 88.571 315 34 2 2354 2667 552641662 552641349 6.540000e-102 381.0
4 TraesCS7B01G168300 chr7A 95.370 108 4 1 2669 2776 276184851 276184745 1.540000e-38 171.0
5 TraesCS7B01G168300 chr7A 95.238 63 2 1 3135 3197 276184652 276184591 7.380000e-17 99.0
6 TraesCS7B01G168300 chr7A 84.706 85 13 0 95 179 642410667 642410583 5.750000e-13 86.1
7 TraesCS7B01G168300 chr7D 95.149 2020 47 21 341 2355 256445291 256443318 0.000000e+00 3140.0
8 TraesCS7B01G168300 chr7D 95.906 171 5 2 179 349 256448532 256448364 3.180000e-70 276.0
9 TraesCS7B01G168300 chr7D 97.468 79 2 0 2945 3023 256443100 256443022 5.620000e-28 135.0
10 TraesCS7B01G168300 chr7D 98.333 60 1 0 3138 3197 256443013 256442954 4.410000e-19 106.0
11 TraesCS7B01G168300 chr5B 89.408 321 32 2 2350 2669 379101378 379101697 1.400000e-108 403.0
12 TraesCS7B01G168300 chr5B 89.109 101 11 0 1376 1476 497757637 497757537 3.390000e-25 126.0
13 TraesCS7B01G168300 chr5B 78.155 206 37 8 1069 1272 704878534 704878733 1.220000e-24 124.0
14 TraesCS7B01G168300 chr4A 89.342 319 32 2 2354 2672 573460928 573461244 1.810000e-107 399.0
15 TraesCS7B01G168300 chr4A 88.365 318 34 3 2353 2669 649472798 649472483 2.350000e-101 379.0
16 TraesCS7B01G168300 chr4A 77.957 186 37 4 1089 1272 610490444 610490261 2.640000e-21 113.0
17 TraesCS7B01G168300 chr4A 86.905 84 11 0 96 179 537281293 537281376 9.550000e-16 95.3
18 TraesCS7B01G168300 chr3B 89.308 318 32 2 2353 2669 547285381 547285065 6.500000e-107 398.0
19 TraesCS7B01G168300 chr3B 87.578 161 20 0 2785 2945 809436540 809436700 1.530000e-43 187.0
20 TraesCS7B01G168300 chr5A 89.490 314 32 1 2354 2667 327512662 327512350 2.340000e-106 396.0
21 TraesCS7B01G168300 chr5A 89.109 101 11 0 1376 1476 525078933 525078833 3.390000e-25 126.0
22 TraesCS7B01G168300 chr5A 90.217 92 7 2 3036 3126 472913011 472913101 5.660000e-23 119.0
23 TraesCS7B01G168300 chr2B 88.785 321 34 2 2350 2669 48326449 48326768 3.020000e-105 392.0
24 TraesCS7B01G168300 chr4B 88.608 316 34 2 2353 2667 435221354 435221668 1.820000e-102 383.0
25 TraesCS7B01G168300 chr4B 88.125 160 19 0 2788 2947 186605568 186605409 1.180000e-44 191.0
26 TraesCS7B01G168300 chr4B 87.898 157 19 0 2788 2944 444099805 444099649 5.510000e-43 185.0
27 TraesCS7B01G168300 chr6B 88.199 322 33 4 2350 2669 625749602 625749920 2.350000e-101 379.0
28 TraesCS7B01G168300 chr1B 89.172 157 17 0 2788 2944 321679753 321679597 2.540000e-46 196.0
29 TraesCS7B01G168300 chr1B 85.714 161 23 0 2788 2948 38212688 38212848 1.540000e-38 171.0
30 TraesCS7B01G168300 chr3A 88.679 159 18 0 2786 2944 41533026 41533184 9.150000e-46 195.0
31 TraesCS7B01G168300 chr3A 78.109 201 35 8 1078 1275 517491279 517491473 5.660000e-23 119.0
32 TraesCS7B01G168300 chr1A 86.145 166 22 1 2788 2952 574829608 574829443 9.210000e-41 178.0
33 TraesCS7B01G168300 chr1A 81.429 140 26 0 40 179 21411142 21411003 7.330000e-22 115.0
34 TraesCS7B01G168300 chr3D 86.452 155 20 1 2792 2946 292880749 292880902 5.550000e-38 169.0
35 TraesCS7B01G168300 chr3D 90.099 101 6 3 3026 3123 426951429 426951528 9.410000e-26 128.0
36 TraesCS7B01G168300 chr3D 91.566 83 5 2 1190 1271 398299766 398299847 2.640000e-21 113.0
37 TraesCS7B01G168300 chr3D 93.103 58 4 0 1219 1276 120908536 120908593 5.750000e-13 86.1
38 TraesCS7B01G168300 chr5D 89.109 101 11 0 1376 1476 413058646 413058546 3.390000e-25 126.0
39 TraesCS7B01G168300 chr5D 79.032 186 35 4 1089 1272 558247753 558247570 1.220000e-24 124.0
40 TraesCS7B01G168300 chr5D 87.736 106 10 3 3024 3128 475004948 475004845 1.570000e-23 121.0
41 TraesCS7B01G168300 chr2A 91.111 90 8 0 3032 3121 196322933 196323022 4.380000e-24 122.0
42 TraesCS7B01G168300 chr2A 91.111 90 8 0 3032 3121 196345029 196345118 4.380000e-24 122.0
43 TraesCS7B01G168300 chr2A 91.111 90 8 0 3032 3121 196355316 196355405 4.380000e-24 122.0
44 TraesCS7B01G168300 chr2A 91.111 90 8 0 3032 3121 196359578 196359667 4.380000e-24 122.0
45 TraesCS7B01G168300 chr2A 90.110 91 9 0 3032 3122 196348863 196348953 5.660000e-23 119.0
46 TraesCS7B01G168300 chr2A 89.247 93 8 2 3035 3126 717955099 717955008 7.330000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G168300 chr7B 235447977 235451208 3231 True 5969.000000 5969 100.000000 1 3232 1 chr7B.!!$R1 3231
1 TraesCS7B01G168300 chr7A 276184591 276187055 2464 True 1254.666667 3494 95.747667 179 3197 3 chr7A.!!$R3 3018
2 TraesCS7B01G168300 chr7D 256442954 256448532 5578 True 914.250000 3140 96.714000 179 3197 4 chr7D.!!$R1 3018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.034896 ATATGAACGTGGCCGGGATC 59.965 55.0 2.18 0.00 38.78 3.36 F
148 149 0.103572 TTGTATCCGGCGGCTTCTAC 59.896 55.0 23.83 18.72 0.00 2.59 F
151 152 0.103572 TATCCGGCGGCTTCTACAAC 59.896 55.0 23.83 0.00 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 5039 1.000496 TTCTCCTCCTCTTCCTCCGA 59.000 55.000 0.00 0.0 0.0 4.55 R
1955 5047 1.691196 CGCTCATCTTCTCCTCCTCT 58.309 55.000 0.00 0.0 0.0 3.69 R
2352 5480 3.413846 AAACCGGAAAGGAGGAAGTAC 57.586 47.619 9.46 0.0 45.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.137794 CCAGTGAGAGTAGAATATGAACGT 57.862 41.667 0.00 0.00 0.00 3.99
24 25 5.974158 CCAGTGAGAGTAGAATATGAACGTG 59.026 44.000 0.00 0.00 0.00 4.49
25 26 5.974158 CAGTGAGAGTAGAATATGAACGTGG 59.026 44.000 0.00 0.00 0.00 4.94
26 27 4.740695 GTGAGAGTAGAATATGAACGTGGC 59.259 45.833 0.00 0.00 0.00 5.01
27 28 4.202121 TGAGAGTAGAATATGAACGTGGCC 60.202 45.833 0.00 0.00 0.00 5.36
28 29 3.050619 GAGTAGAATATGAACGTGGCCG 58.949 50.000 0.00 0.00 40.83 6.13
29 30 2.132762 GTAGAATATGAACGTGGCCGG 58.867 52.381 0.00 0.00 38.78 6.13
30 31 0.179056 AGAATATGAACGTGGCCGGG 60.179 55.000 2.18 0.00 38.78 5.73
31 32 0.179067 GAATATGAACGTGGCCGGGA 60.179 55.000 2.18 0.00 38.78 5.14
32 33 0.472471 AATATGAACGTGGCCGGGAT 59.528 50.000 2.18 0.00 38.78 3.85
33 34 0.034896 ATATGAACGTGGCCGGGATC 59.965 55.000 2.18 0.00 38.78 3.36
34 35 1.331399 TATGAACGTGGCCGGGATCA 61.331 55.000 2.18 8.00 38.78 2.92
35 36 1.983119 ATGAACGTGGCCGGGATCAT 61.983 55.000 2.18 11.34 38.78 2.45
36 37 1.887707 GAACGTGGCCGGGATCATC 60.888 63.158 2.18 0.00 38.78 2.92
37 38 2.311688 GAACGTGGCCGGGATCATCT 62.312 60.000 2.18 0.00 38.78 2.90
38 39 1.910580 AACGTGGCCGGGATCATCTT 61.911 55.000 2.18 0.00 38.78 2.40
39 40 1.153168 CGTGGCCGGGATCATCTTT 60.153 57.895 2.18 0.00 0.00 2.52
40 41 0.748005 CGTGGCCGGGATCATCTTTT 60.748 55.000 2.18 0.00 0.00 2.27
41 42 1.474330 GTGGCCGGGATCATCTTTTT 58.526 50.000 2.18 0.00 0.00 1.94
57 58 2.785713 TTTTTCCTAGTGCGCCAAAC 57.214 45.000 4.18 0.00 0.00 2.93
58 59 1.681538 TTTTCCTAGTGCGCCAAACA 58.318 45.000 4.18 0.00 0.00 2.83
59 60 1.904287 TTTCCTAGTGCGCCAAACAT 58.096 45.000 4.18 0.00 0.00 2.71
60 61 2.772077 TTCCTAGTGCGCCAAACATA 57.228 45.000 4.18 0.00 0.00 2.29
61 62 3.275617 TTCCTAGTGCGCCAAACATAT 57.724 42.857 4.18 0.00 0.00 1.78
62 63 3.275617 TCCTAGTGCGCCAAACATATT 57.724 42.857 4.18 0.00 0.00 1.28
63 64 3.616219 TCCTAGTGCGCCAAACATATTT 58.384 40.909 4.18 0.00 0.00 1.40
64 65 4.771903 TCCTAGTGCGCCAAACATATTTA 58.228 39.130 4.18 0.00 0.00 1.40
65 66 4.814234 TCCTAGTGCGCCAAACATATTTAG 59.186 41.667 4.18 0.00 0.00 1.85
66 67 4.024048 CCTAGTGCGCCAAACATATTTAGG 60.024 45.833 4.18 0.00 0.00 2.69
67 68 3.616219 AGTGCGCCAAACATATTTAGGA 58.384 40.909 4.18 0.00 0.00 2.94
68 69 4.207165 AGTGCGCCAAACATATTTAGGAT 58.793 39.130 4.18 0.00 0.00 3.24
69 70 4.644685 AGTGCGCCAAACATATTTAGGATT 59.355 37.500 4.18 0.00 0.00 3.01
70 71 5.825679 AGTGCGCCAAACATATTTAGGATTA 59.174 36.000 4.18 0.00 0.00 1.75
71 72 6.017109 AGTGCGCCAAACATATTTAGGATTAG 60.017 38.462 4.18 0.00 0.00 1.73
72 73 5.240623 TGCGCCAAACATATTTAGGATTAGG 59.759 40.000 4.18 0.00 0.00 2.69
73 74 5.472137 GCGCCAAACATATTTAGGATTAGGA 59.528 40.000 0.00 0.00 0.00 2.94
74 75 6.151144 GCGCCAAACATATTTAGGATTAGGAT 59.849 38.462 0.00 0.00 0.00 3.24
75 76 7.335924 GCGCCAAACATATTTAGGATTAGGATA 59.664 37.037 0.00 0.00 0.00 2.59
76 77 9.226606 CGCCAAACATATTTAGGATTAGGATAA 57.773 33.333 0.00 0.00 0.00 1.75
81 82 9.734984 AACATATTTAGGATTAGGATAAACCGG 57.265 33.333 0.00 0.00 44.74 5.28
82 83 8.326529 ACATATTTAGGATTAGGATAAACCGGG 58.673 37.037 6.32 0.00 44.74 5.73
83 84 8.545472 CATATTTAGGATTAGGATAAACCGGGA 58.455 37.037 6.32 0.00 44.74 5.14
84 85 7.584396 ATTTAGGATTAGGATAAACCGGGAT 57.416 36.000 6.32 0.00 44.74 3.85
85 86 6.616237 TTAGGATTAGGATAAACCGGGATC 57.384 41.667 6.32 5.51 44.74 3.36
86 87 4.499472 AGGATTAGGATAAACCGGGATCA 58.501 43.478 6.32 0.00 44.74 2.92
87 88 4.911522 AGGATTAGGATAAACCGGGATCAA 59.088 41.667 6.32 0.00 44.74 2.57
88 89 5.371472 AGGATTAGGATAAACCGGGATCAAA 59.629 40.000 6.32 4.80 44.74 2.69
89 90 5.705905 GGATTAGGATAAACCGGGATCAAAG 59.294 44.000 6.32 0.00 44.74 2.77
90 91 5.961398 TTAGGATAAACCGGGATCAAAGA 57.039 39.130 6.32 0.00 44.74 2.52
91 92 4.423625 AGGATAAACCGGGATCAAAGAG 57.576 45.455 6.32 0.00 44.74 2.85
92 93 4.037927 AGGATAAACCGGGATCAAAGAGA 58.962 43.478 6.32 0.00 44.74 3.10
93 94 4.660771 AGGATAAACCGGGATCAAAGAGAT 59.339 41.667 6.32 0.00 44.74 2.75
94 95 5.221742 AGGATAAACCGGGATCAAAGAGATC 60.222 44.000 6.32 0.00 46.63 2.75
109 110 8.637196 TCAAAGAGATCAGAGTACTAACTTCA 57.363 34.615 0.00 0.00 35.56 3.02
110 111 9.078990 TCAAAGAGATCAGAGTACTAACTTCAA 57.921 33.333 0.00 0.00 35.56 2.69
111 112 9.352784 CAAAGAGATCAGAGTACTAACTTCAAG 57.647 37.037 0.00 0.00 35.56 3.02
112 113 7.639113 AGAGATCAGAGTACTAACTTCAAGG 57.361 40.000 0.00 0.00 35.56 3.61
113 114 7.406916 AGAGATCAGAGTACTAACTTCAAGGA 58.593 38.462 0.00 0.00 35.56 3.36
114 115 8.058847 AGAGATCAGAGTACTAACTTCAAGGAT 58.941 37.037 0.00 0.00 35.56 3.24
115 116 8.602472 AGATCAGAGTACTAACTTCAAGGATT 57.398 34.615 0.00 0.00 35.56 3.01
116 117 9.041354 AGATCAGAGTACTAACTTCAAGGATTT 57.959 33.333 0.00 0.00 35.56 2.17
117 118 9.092876 GATCAGAGTACTAACTTCAAGGATTTG 57.907 37.037 0.00 0.00 35.56 2.32
118 119 8.190326 TCAGAGTACTAACTTCAAGGATTTGA 57.810 34.615 0.00 0.00 41.44 2.69
127 128 4.722526 TTCAAGGATTTGAAGGTGAGGA 57.277 40.909 0.00 0.00 45.77 3.71
128 129 4.934797 TCAAGGATTTGAAGGTGAGGAT 57.065 40.909 0.00 0.00 40.26 3.24
129 130 5.261040 TCAAGGATTTGAAGGTGAGGATT 57.739 39.130 0.00 0.00 40.26 3.01
130 131 5.644188 TCAAGGATTTGAAGGTGAGGATTT 58.356 37.500 0.00 0.00 40.26 2.17
131 132 5.477984 TCAAGGATTTGAAGGTGAGGATTTG 59.522 40.000 0.00 0.00 40.26 2.32
132 133 5.003096 AGGATTTGAAGGTGAGGATTTGT 57.997 39.130 0.00 0.00 0.00 2.83
133 134 6.139679 AGGATTTGAAGGTGAGGATTTGTA 57.860 37.500 0.00 0.00 0.00 2.41
134 135 6.735556 AGGATTTGAAGGTGAGGATTTGTAT 58.264 36.000 0.00 0.00 0.00 2.29
135 136 6.830838 AGGATTTGAAGGTGAGGATTTGTATC 59.169 38.462 0.00 0.00 0.00 2.24
142 143 3.340789 GGATTTGTATCCGGCGGC 58.659 61.111 23.83 8.26 40.98 6.53
143 144 1.227853 GGATTTGTATCCGGCGGCT 60.228 57.895 23.83 15.71 40.98 5.52
144 145 0.818040 GGATTTGTATCCGGCGGCTT 60.818 55.000 23.83 13.95 40.98 4.35
145 146 0.586802 GATTTGTATCCGGCGGCTTC 59.413 55.000 23.83 10.70 0.00 3.86
146 147 0.180406 ATTTGTATCCGGCGGCTTCT 59.820 50.000 23.83 8.23 0.00 2.85
147 148 0.825410 TTTGTATCCGGCGGCTTCTA 59.175 50.000 23.83 3.23 0.00 2.10
148 149 0.103572 TTGTATCCGGCGGCTTCTAC 59.896 55.000 23.83 18.72 0.00 2.59
149 150 1.038681 TGTATCCGGCGGCTTCTACA 61.039 55.000 23.83 20.92 0.00 2.74
150 151 0.103572 GTATCCGGCGGCTTCTACAA 59.896 55.000 23.83 0.44 0.00 2.41
151 152 0.103572 TATCCGGCGGCTTCTACAAC 59.896 55.000 23.83 0.00 0.00 3.32
152 153 2.588856 ATCCGGCGGCTTCTACAACC 62.589 60.000 23.83 0.00 0.00 3.77
153 154 2.264794 CGGCGGCTTCTACAACCT 59.735 61.111 7.61 0.00 0.00 3.50
154 155 1.810030 CGGCGGCTTCTACAACCTC 60.810 63.158 7.61 0.00 0.00 3.85
155 156 1.295423 GGCGGCTTCTACAACCTCA 59.705 57.895 0.00 0.00 0.00 3.86
156 157 0.741221 GGCGGCTTCTACAACCTCAG 60.741 60.000 0.00 0.00 0.00 3.35
157 158 0.246635 GCGGCTTCTACAACCTCAGA 59.753 55.000 0.00 0.00 0.00 3.27
158 159 1.737363 GCGGCTTCTACAACCTCAGAG 60.737 57.143 0.00 0.00 0.00 3.35
159 160 1.546476 CGGCTTCTACAACCTCAGAGT 59.454 52.381 0.00 0.00 0.00 3.24
160 161 2.028930 CGGCTTCTACAACCTCAGAGTT 60.029 50.000 0.00 0.00 0.00 3.01
161 162 3.555168 CGGCTTCTACAACCTCAGAGTTT 60.555 47.826 0.00 0.00 0.00 2.66
162 163 4.321750 CGGCTTCTACAACCTCAGAGTTTA 60.322 45.833 0.00 0.00 0.00 2.01
163 164 5.624738 CGGCTTCTACAACCTCAGAGTTTAT 60.625 44.000 0.00 0.00 0.00 1.40
164 165 6.174049 GGCTTCTACAACCTCAGAGTTTATT 58.826 40.000 0.00 0.00 0.00 1.40
165 166 6.655425 GGCTTCTACAACCTCAGAGTTTATTT 59.345 38.462 0.00 0.00 0.00 1.40
166 167 7.148390 GGCTTCTACAACCTCAGAGTTTATTTC 60.148 40.741 0.00 0.00 0.00 2.17
167 168 7.387948 GCTTCTACAACCTCAGAGTTTATTTCA 59.612 37.037 0.00 0.00 0.00 2.69
168 169 8.833231 TTCTACAACCTCAGAGTTTATTTCAG 57.167 34.615 0.00 0.00 0.00 3.02
169 170 8.190326 TCTACAACCTCAGAGTTTATTTCAGA 57.810 34.615 0.00 0.00 0.00 3.27
170 171 8.088981 TCTACAACCTCAGAGTTTATTTCAGAC 58.911 37.037 0.00 0.00 0.00 3.51
171 172 6.831976 ACAACCTCAGAGTTTATTTCAGACT 58.168 36.000 0.00 0.00 0.00 3.24
172 173 7.283329 ACAACCTCAGAGTTTATTTCAGACTT 58.717 34.615 0.00 0.00 0.00 3.01
173 174 7.442666 ACAACCTCAGAGTTTATTTCAGACTTC 59.557 37.037 0.00 0.00 0.00 3.01
174 175 7.067496 ACCTCAGAGTTTATTTCAGACTTCA 57.933 36.000 0.00 0.00 0.00 3.02
175 176 6.931840 ACCTCAGAGTTTATTTCAGACTTCAC 59.068 38.462 0.00 0.00 0.00 3.18
176 177 7.158021 CCTCAGAGTTTATTTCAGACTTCACT 58.842 38.462 0.00 0.00 0.00 3.41
177 178 7.330700 CCTCAGAGTTTATTTCAGACTTCACTC 59.669 40.741 0.00 0.00 0.00 3.51
189 190 4.629200 CAGACTTCACTCAACTAATCAGCC 59.371 45.833 0.00 0.00 0.00 4.85
191 192 4.573900 ACTTCACTCAACTAATCAGCCAG 58.426 43.478 0.00 0.00 0.00 4.85
232 233 1.992170 AGCTAAACGACCGATCACAC 58.008 50.000 0.00 0.00 0.00 3.82
407 3491 1.792949 GTAGCTCCGCGGATATTTGTG 59.207 52.381 31.19 16.43 0.00 3.33
408 3492 0.178068 AGCTCCGCGGATATTTGTGT 59.822 50.000 31.19 5.41 0.00 3.72
409 3493 1.411246 AGCTCCGCGGATATTTGTGTA 59.589 47.619 31.19 1.15 0.00 2.90
410 3494 1.525619 GCTCCGCGGATATTTGTGTAC 59.474 52.381 31.19 4.32 0.00 2.90
610 3699 2.529389 AGTTTCGGAGCCCCACCT 60.529 61.111 0.00 0.00 0.00 4.00
644 3733 3.494254 TCCCCACACCACCCACAC 61.494 66.667 0.00 0.00 0.00 3.82
654 3743 1.925455 CACCCACACCCCTCCAGAT 60.925 63.158 0.00 0.00 0.00 2.90
664 3753 2.132996 CCTCCAGATGCCGCTCTCT 61.133 63.158 0.00 0.00 0.00 3.10
1360 4452 0.803768 CGGAATGTCGAGGTGCTCAG 60.804 60.000 0.00 0.00 0.00 3.35
1754 4846 2.676463 GCTCGGTCAGATGAAGAAGCTT 60.676 50.000 0.00 0.00 0.00 3.74
1871 4963 1.527433 CTGGTGAGTCGGCAGAGACA 61.527 60.000 8.54 0.00 43.24 3.41
1931 5023 1.607178 CTGCCCAAATGCTCCCACA 60.607 57.895 0.00 0.00 0.00 4.17
1955 5047 1.220749 CGATTTGGGCTCGGAGGAA 59.779 57.895 7.20 0.00 32.58 3.36
2298 5397 1.830279 TCAGGGTCGTGTACTGGTAG 58.170 55.000 0.00 0.00 33.19 3.18
2299 5398 1.074405 TCAGGGTCGTGTACTGGTAGT 59.926 52.381 0.00 0.00 33.19 2.73
2361 5489 8.950208 ATTCAGCACTAATTAAGTACTTCCTC 57.050 34.615 12.39 0.00 35.76 3.71
2362 5490 6.875076 TCAGCACTAATTAAGTACTTCCTCC 58.125 40.000 12.39 0.00 35.76 4.30
2363 5491 6.668283 TCAGCACTAATTAAGTACTTCCTCCT 59.332 38.462 12.39 0.00 35.76 3.69
2364 5492 7.180408 TCAGCACTAATTAAGTACTTCCTCCTT 59.820 37.037 12.39 2.79 35.76 3.36
2365 5493 7.824779 CAGCACTAATTAAGTACTTCCTCCTTT 59.175 37.037 12.39 1.29 35.76 3.11
2366 5494 8.041919 AGCACTAATTAAGTACTTCCTCCTTTC 58.958 37.037 12.39 0.00 35.76 2.62
2367 5495 7.280428 GCACTAATTAAGTACTTCCTCCTTTCC 59.720 40.741 12.39 0.00 35.76 3.13
2368 5496 7.491696 CACTAATTAAGTACTTCCTCCTTTCCG 59.508 40.741 12.39 0.00 35.76 4.30
2369 5497 4.813750 TTAAGTACTTCCTCCTTTCCGG 57.186 45.455 12.39 0.00 0.00 5.14
2370 5498 2.322339 AGTACTTCCTCCTTTCCGGT 57.678 50.000 0.00 0.00 0.00 5.28
2371 5499 2.617658 AGTACTTCCTCCTTTCCGGTT 58.382 47.619 0.00 0.00 0.00 4.44
2372 5500 2.977580 AGTACTTCCTCCTTTCCGGTTT 59.022 45.455 0.00 0.00 0.00 3.27
2373 5501 4.162651 AGTACTTCCTCCTTTCCGGTTTA 58.837 43.478 0.00 0.00 0.00 2.01
2374 5502 4.781621 AGTACTTCCTCCTTTCCGGTTTAT 59.218 41.667 0.00 0.00 0.00 1.40
2375 5503 5.960202 AGTACTTCCTCCTTTCCGGTTTATA 59.040 40.000 0.00 0.00 0.00 0.98
2376 5504 5.354842 ACTTCCTCCTTTCCGGTTTATAG 57.645 43.478 0.00 0.00 0.00 1.31
2377 5505 4.163649 ACTTCCTCCTTTCCGGTTTATAGG 59.836 45.833 0.00 4.93 0.00 2.57
2378 5506 3.998279 TCCTCCTTTCCGGTTTATAGGA 58.002 45.455 0.00 7.43 30.49 2.94
2380 5508 3.710165 CCTCCTTTCCGGTTTATAGGAGT 59.290 47.826 24.46 0.00 46.84 3.85
2381 5509 4.163649 CCTCCTTTCCGGTTTATAGGAGTT 59.836 45.833 24.46 0.00 46.84 3.01
2382 5510 5.364735 CCTCCTTTCCGGTTTATAGGAGTTA 59.635 44.000 24.46 5.07 46.84 2.24
2383 5511 6.042897 CCTCCTTTCCGGTTTATAGGAGTTAT 59.957 42.308 24.46 0.00 46.84 1.89
2384 5512 7.059202 TCCTTTCCGGTTTATAGGAGTTATC 57.941 40.000 0.00 0.00 37.88 1.75
2385 5513 6.842807 TCCTTTCCGGTTTATAGGAGTTATCT 59.157 38.462 0.00 0.00 37.88 1.98
2386 5514 7.015001 TCCTTTCCGGTTTATAGGAGTTATCTC 59.985 40.741 0.00 0.00 37.88 2.75
2387 5515 7.201974 CCTTTCCGGTTTATAGGAGTTATCTCA 60.202 40.741 0.00 0.00 42.05 3.27
2388 5516 7.664552 TTCCGGTTTATAGGAGTTATCTCAA 57.335 36.000 0.00 0.00 42.05 3.02
2389 5517 7.664552 TCCGGTTTATAGGAGTTATCTCAAA 57.335 36.000 0.00 0.00 42.05 2.69
2390 5518 8.081517 TCCGGTTTATAGGAGTTATCTCAAAA 57.918 34.615 0.00 0.00 42.05 2.44
2391 5519 8.711170 TCCGGTTTATAGGAGTTATCTCAAAAT 58.289 33.333 0.00 0.00 42.05 1.82
2392 5520 8.989980 CCGGTTTATAGGAGTTATCTCAAAATC 58.010 37.037 0.00 0.00 42.05 2.17
2393 5521 9.765795 CGGTTTATAGGAGTTATCTCAAAATCT 57.234 33.333 3.30 0.00 42.05 2.40
2435 5563 9.729281 ATAAGGCTCAATTTGATTGTTTTTCAT 57.271 25.926 0.00 0.00 41.02 2.57
2436 5564 7.662604 AGGCTCAATTTGATTGTTTTTCATC 57.337 32.000 0.00 0.00 41.02 2.92
2437 5565 7.218614 AGGCTCAATTTGATTGTTTTTCATCA 58.781 30.769 0.00 0.00 41.02 3.07
2438 5566 7.172019 AGGCTCAATTTGATTGTTTTTCATCAC 59.828 33.333 0.00 0.00 41.02 3.06
2439 5567 7.041916 GGCTCAATTTGATTGTTTTTCATCACA 60.042 33.333 0.00 0.00 41.02 3.58
2440 5568 8.500773 GCTCAATTTGATTGTTTTTCATCACAT 58.499 29.630 0.00 0.00 41.02 3.21
2441 5569 9.805966 CTCAATTTGATTGTTTTTCATCACATG 57.194 29.630 0.00 0.00 41.02 3.21
2442 5570 9.327628 TCAATTTGATTGTTTTTCATCACATGT 57.672 25.926 0.00 0.00 41.02 3.21
2443 5571 9.938670 CAATTTGATTGTTTTTCATCACATGTT 57.061 25.926 0.00 0.00 35.57 2.71
2445 5573 8.713737 TTTGATTGTTTTTCATCACATGTTCA 57.286 26.923 0.00 0.00 0.00 3.18
2446 5574 7.933728 TGATTGTTTTTCATCACATGTTCAG 57.066 32.000 0.00 0.00 0.00 3.02
2447 5575 7.714703 TGATTGTTTTTCATCACATGTTCAGA 58.285 30.769 0.00 0.00 0.00 3.27
2448 5576 8.361889 TGATTGTTTTTCATCACATGTTCAGAT 58.638 29.630 0.00 0.00 0.00 2.90
2449 5577 9.199982 GATTGTTTTTCATCACATGTTCAGATT 57.800 29.630 0.00 0.00 0.00 2.40
2450 5578 8.945481 TTGTTTTTCATCACATGTTCAGATTT 57.055 26.923 0.00 0.00 0.00 2.17
2451 5579 8.578308 TGTTTTTCATCACATGTTCAGATTTC 57.422 30.769 0.00 0.00 0.00 2.17
2452 5580 8.196103 TGTTTTTCATCACATGTTCAGATTTCA 58.804 29.630 0.00 0.00 0.00 2.69
2453 5581 9.033481 GTTTTTCATCACATGTTCAGATTTCAA 57.967 29.630 0.00 0.00 0.00 2.69
2454 5582 8.806177 TTTTCATCACATGTTCAGATTTCAAG 57.194 30.769 0.00 0.00 0.00 3.02
2455 5583 6.505044 TCATCACATGTTCAGATTTCAAGG 57.495 37.500 0.00 0.00 0.00 3.61
2456 5584 6.005823 TCATCACATGTTCAGATTTCAAGGT 58.994 36.000 0.00 0.00 0.00 3.50
2457 5585 5.694231 TCACATGTTCAGATTTCAAGGTG 57.306 39.130 0.00 0.00 0.00 4.00
2458 5586 4.022935 TCACATGTTCAGATTTCAAGGTGC 60.023 41.667 0.00 0.00 0.00 5.01
2459 5587 3.890756 ACATGTTCAGATTTCAAGGTGCA 59.109 39.130 0.00 0.00 0.00 4.57
2460 5588 4.525487 ACATGTTCAGATTTCAAGGTGCAT 59.475 37.500 0.00 0.00 0.00 3.96
2461 5589 5.011329 ACATGTTCAGATTTCAAGGTGCATT 59.989 36.000 0.00 0.00 0.00 3.56
2462 5590 6.209192 ACATGTTCAGATTTCAAGGTGCATTA 59.791 34.615 0.00 0.00 0.00 1.90
2463 5591 6.647334 TGTTCAGATTTCAAGGTGCATTAA 57.353 33.333 0.00 0.00 0.00 1.40
2464 5592 7.048629 TGTTCAGATTTCAAGGTGCATTAAA 57.951 32.000 0.00 0.00 0.00 1.52
2465 5593 7.669427 TGTTCAGATTTCAAGGTGCATTAAAT 58.331 30.769 0.00 0.00 0.00 1.40
2466 5594 7.814107 TGTTCAGATTTCAAGGTGCATTAAATC 59.186 33.333 0.00 2.14 37.00 2.17
2467 5595 7.465353 TCAGATTTCAAGGTGCATTAAATCA 57.535 32.000 17.06 3.49 38.45 2.57
2468 5596 8.070034 TCAGATTTCAAGGTGCATTAAATCAT 57.930 30.769 17.06 6.62 38.45 2.45
2469 5597 8.533657 TCAGATTTCAAGGTGCATTAAATCATT 58.466 29.630 17.06 0.00 38.45 2.57
2470 5598 8.600625 CAGATTTCAAGGTGCATTAAATCATTG 58.399 33.333 17.06 7.51 38.45 2.82
2471 5599 6.724694 TTTCAAGGTGCATTAAATCATTGC 57.275 33.333 0.00 0.00 36.91 3.56
2472 5600 5.402997 TCAAGGTGCATTAAATCATTGCA 57.597 34.783 0.00 0.00 43.63 4.08
2473 5601 5.979993 TCAAGGTGCATTAAATCATTGCAT 58.020 33.333 4.14 0.00 46.90 3.96
2474 5602 5.813157 TCAAGGTGCATTAAATCATTGCATG 59.187 36.000 4.14 0.11 46.90 4.06
2475 5603 4.124238 AGGTGCATTAAATCATTGCATGC 58.876 39.130 11.82 11.82 46.90 4.06
2476 5604 3.872182 GGTGCATTAAATCATTGCATGCA 59.128 39.130 18.46 18.46 46.90 3.96
2477 5605 4.333095 GGTGCATTAAATCATTGCATGCAA 59.667 37.500 33.57 33.57 46.90 4.08
2478 5606 5.498159 GTGCATTAAATCATTGCATGCAAG 58.502 37.500 34.15 25.40 46.90 4.01
2479 5607 5.064198 GTGCATTAAATCATTGCATGCAAGT 59.936 36.000 34.15 21.32 46.90 3.16
2480 5608 6.256104 GTGCATTAAATCATTGCATGCAAGTA 59.744 34.615 34.15 25.25 46.90 2.24
2481 5609 6.987404 TGCATTAAATCATTGCATGCAAGTAT 59.013 30.769 34.15 26.18 40.64 2.12
2482 5610 7.496263 TGCATTAAATCATTGCATGCAAGTATT 59.504 29.630 34.15 29.40 40.64 1.89
2483 5611 7.796660 GCATTAAATCATTGCATGCAAGTATTG 59.203 33.333 34.15 27.02 41.71 1.90
2501 5629 8.574196 AAGTATTGAAAGAAAATTGACCAACG 57.426 30.769 0.00 0.00 0.00 4.10
2502 5630 5.905480 ATTGAAAGAAAATTGACCAACGC 57.095 34.783 0.00 0.00 0.00 4.84
2503 5631 4.377839 TGAAAGAAAATTGACCAACGCA 57.622 36.364 0.00 0.00 0.00 5.24
2504 5632 4.942852 TGAAAGAAAATTGACCAACGCAT 58.057 34.783 0.00 0.00 0.00 4.73
2505 5633 4.744137 TGAAAGAAAATTGACCAACGCATG 59.256 37.500 0.00 0.00 0.00 4.06
2506 5634 4.320608 AAGAAAATTGACCAACGCATGT 57.679 36.364 0.00 0.00 0.00 3.21
2507 5635 5.446143 AAGAAAATTGACCAACGCATGTA 57.554 34.783 0.00 0.00 0.00 2.29
2508 5636 4.794169 AGAAAATTGACCAACGCATGTAC 58.206 39.130 0.00 0.00 0.00 2.90
2509 5637 4.518970 AGAAAATTGACCAACGCATGTACT 59.481 37.500 0.00 0.00 0.00 2.73
2510 5638 4.846779 AAATTGACCAACGCATGTACTT 57.153 36.364 0.00 0.00 0.00 2.24
2511 5639 4.846779 AATTGACCAACGCATGTACTTT 57.153 36.364 0.00 0.00 0.00 2.66
2512 5640 5.950758 AATTGACCAACGCATGTACTTTA 57.049 34.783 0.00 0.00 0.00 1.85
2513 5641 6.509418 AATTGACCAACGCATGTACTTTAT 57.491 33.333 0.00 0.00 0.00 1.40
2514 5642 4.937696 TGACCAACGCATGTACTTTATG 57.062 40.909 0.00 0.00 0.00 1.90
2515 5643 3.126171 TGACCAACGCATGTACTTTATGC 59.874 43.478 6.59 6.59 45.64 3.14
2596 5724 8.972073 GCTTTTGCAAACTACAAAAAGTATTC 57.028 30.769 12.39 0.00 44.07 1.75
2597 5725 8.061857 GCTTTTGCAAACTACAAAAAGTATTCC 58.938 33.333 12.39 0.00 44.07 3.01
2598 5726 9.092876 CTTTTGCAAACTACAAAAAGTATTCCA 57.907 29.630 12.39 0.00 44.07 3.53
2599 5727 9.606631 TTTTGCAAACTACAAAAAGTATTCCAT 57.393 25.926 12.39 0.00 42.39 3.41
2600 5728 8.810652 TTGCAAACTACAAAAAGTATTCCATC 57.189 30.769 0.00 0.00 30.93 3.51
2601 5729 7.946207 TGCAAACTACAAAAAGTATTCCATCA 58.054 30.769 0.00 0.00 30.93 3.07
2602 5730 7.865385 TGCAAACTACAAAAAGTATTCCATCAC 59.135 33.333 0.00 0.00 30.93 3.06
2603 5731 8.082242 GCAAACTACAAAAAGTATTCCATCACT 58.918 33.333 0.00 0.00 30.93 3.41
2604 5732 9.612620 CAAACTACAAAAAGTATTCCATCACTC 57.387 33.333 0.00 0.00 30.93 3.51
2605 5733 8.918202 AACTACAAAAAGTATTCCATCACTCA 57.082 30.769 0.00 0.00 30.93 3.41
2606 5734 8.324163 ACTACAAAAAGTATTCCATCACTCAC 57.676 34.615 0.00 0.00 30.93 3.51
2607 5735 6.575162 ACAAAAAGTATTCCATCACTCACC 57.425 37.500 0.00 0.00 0.00 4.02
2608 5736 6.068010 ACAAAAAGTATTCCATCACTCACCA 58.932 36.000 0.00 0.00 0.00 4.17
2609 5737 6.721208 ACAAAAAGTATTCCATCACTCACCAT 59.279 34.615 0.00 0.00 0.00 3.55
2610 5738 7.094205 ACAAAAAGTATTCCATCACTCACCATC 60.094 37.037 0.00 0.00 0.00 3.51
2611 5739 5.965033 AAGTATTCCATCACTCACCATCT 57.035 39.130 0.00 0.00 0.00 2.90
2612 5740 7.437713 AAAGTATTCCATCACTCACCATCTA 57.562 36.000 0.00 0.00 0.00 1.98
2613 5741 7.623999 AAGTATTCCATCACTCACCATCTAT 57.376 36.000 0.00 0.00 0.00 1.98
2614 5742 7.238486 AGTATTCCATCACTCACCATCTATC 57.762 40.000 0.00 0.00 0.00 2.08
2615 5743 7.015680 AGTATTCCATCACTCACCATCTATCT 58.984 38.462 0.00 0.00 0.00 1.98
2616 5744 6.760440 ATTCCATCACTCACCATCTATCTT 57.240 37.500 0.00 0.00 0.00 2.40
2617 5745 5.541953 TCCATCACTCACCATCTATCTTG 57.458 43.478 0.00 0.00 0.00 3.02
2618 5746 4.346127 TCCATCACTCACCATCTATCTTGG 59.654 45.833 0.00 0.00 40.26 3.61
2620 5748 5.397221 CCATCACTCACCATCTATCTTGGTT 60.397 44.000 0.00 0.00 45.19 3.67
2621 5749 5.089970 TCACTCACCATCTATCTTGGTTG 57.910 43.478 0.00 0.00 45.19 3.77
2622 5750 4.080919 TCACTCACCATCTATCTTGGTTGG 60.081 45.833 0.00 0.00 45.19 3.77
2623 5751 3.846588 ACTCACCATCTATCTTGGTTGGT 59.153 43.478 0.00 0.00 45.19 3.67
2626 5754 4.494091 ACCATCTATCTTGGTTGGTGAG 57.506 45.455 0.00 0.00 45.19 3.51
2627 5755 4.104086 ACCATCTATCTTGGTTGGTGAGA 58.896 43.478 0.00 0.00 45.19 3.27
2628 5756 4.723789 ACCATCTATCTTGGTTGGTGAGAT 59.276 41.667 0.00 0.00 45.19 2.75
2629 5757 5.192522 ACCATCTATCTTGGTTGGTGAGATT 59.807 40.000 0.00 0.00 45.19 2.40
2630 5758 6.125029 CCATCTATCTTGGTTGGTGAGATTT 58.875 40.000 0.00 0.00 32.68 2.17
2631 5759 6.604795 CCATCTATCTTGGTTGGTGAGATTTT 59.395 38.462 0.00 0.00 32.68 1.82
2632 5760 7.123247 CCATCTATCTTGGTTGGTGAGATTTTT 59.877 37.037 0.00 0.00 32.68 1.94
2633 5761 7.687941 TCTATCTTGGTTGGTGAGATTTTTC 57.312 36.000 0.00 0.00 32.68 2.29
2634 5762 7.230747 TCTATCTTGGTTGGTGAGATTTTTCA 58.769 34.615 0.00 0.00 32.68 2.69
2635 5763 6.729690 ATCTTGGTTGGTGAGATTTTTCAA 57.270 33.333 0.00 0.00 0.00 2.69
2636 5764 6.729690 TCTTGGTTGGTGAGATTTTTCAAT 57.270 33.333 0.00 0.00 0.00 2.57
2637 5765 7.123355 TCTTGGTTGGTGAGATTTTTCAATT 57.877 32.000 0.00 0.00 0.00 2.32
2638 5766 8.243961 TCTTGGTTGGTGAGATTTTTCAATTA 57.756 30.769 0.00 0.00 0.00 1.40
2639 5767 8.700051 TCTTGGTTGGTGAGATTTTTCAATTAA 58.300 29.630 0.00 0.00 0.00 1.40
2640 5768 9.323985 CTTGGTTGGTGAGATTTTTCAATTAAA 57.676 29.630 0.00 0.00 0.00 1.52
2641 5769 8.655651 TGGTTGGTGAGATTTTTCAATTAAAC 57.344 30.769 0.00 0.00 0.00 2.01
2642 5770 7.713073 TGGTTGGTGAGATTTTTCAATTAAACC 59.287 33.333 0.00 0.00 32.99 3.27
2643 5771 7.931407 GGTTGGTGAGATTTTTCAATTAAACCT 59.069 33.333 0.00 0.00 31.45 3.50
2644 5772 9.325198 GTTGGTGAGATTTTTCAATTAAACCTT 57.675 29.630 0.00 0.00 0.00 3.50
2653 5781 8.989653 TTTTTCAATTAAACCTTATAAGCGGG 57.010 30.769 6.99 0.00 0.00 6.13
2654 5782 7.941431 TTTCAATTAAACCTTATAAGCGGGA 57.059 32.000 6.99 0.00 0.00 5.14
2655 5783 7.941431 TTCAATTAAACCTTATAAGCGGGAA 57.059 32.000 6.99 0.00 0.00 3.97
2656 5784 7.941431 TCAATTAAACCTTATAAGCGGGAAA 57.059 32.000 6.99 0.00 0.00 3.13
2657 5785 7.992008 TCAATTAAACCTTATAAGCGGGAAAG 58.008 34.615 6.99 0.00 0.00 2.62
2658 5786 6.954487 ATTAAACCTTATAAGCGGGAAAGG 57.046 37.500 6.99 8.76 43.42 3.11
2659 5787 4.579647 AAACCTTATAAGCGGGAAAGGA 57.420 40.909 15.11 0.00 40.85 3.36
2660 5788 3.840124 ACCTTATAAGCGGGAAAGGAG 57.160 47.619 15.11 0.00 40.85 3.69
2661 5789 3.113043 ACCTTATAAGCGGGAAAGGAGT 58.887 45.455 15.11 0.00 40.85 3.85
2662 5790 3.118371 ACCTTATAAGCGGGAAAGGAGTG 60.118 47.826 15.11 0.00 40.85 3.51
2663 5791 3.134081 CCTTATAAGCGGGAAAGGAGTGA 59.866 47.826 6.99 0.00 40.85 3.41
2664 5792 2.990066 ATAAGCGGGAAAGGAGTGAG 57.010 50.000 0.00 0.00 0.00 3.51
2665 5793 1.640917 TAAGCGGGAAAGGAGTGAGT 58.359 50.000 0.00 0.00 0.00 3.41
2666 5794 1.640917 AAGCGGGAAAGGAGTGAGTA 58.359 50.000 0.00 0.00 0.00 2.59
2680 5808 7.493499 AGGAGTGAGTAGTAGTAGTAAGTCA 57.507 40.000 6.86 0.00 0.00 3.41
2699 5827 6.570672 AGTCACATGTACGTAGAGAGAAAA 57.429 37.500 0.00 0.00 0.00 2.29
2708 5836 6.982141 TGTACGTAGAGAGAAAAGAAAGCAAA 59.018 34.615 0.00 0.00 0.00 3.68
2755 6022 0.250770 AAGTTTCTCGGCAAGTCCCC 60.251 55.000 0.00 0.00 0.00 4.81
2790 6057 7.265673 TCATCTCCAAAGTACTATTTCTTCCG 58.734 38.462 0.00 0.00 0.00 4.30
2791 6058 6.600882 TCTCCAAAGTACTATTTCTTCCGT 57.399 37.500 0.00 0.00 0.00 4.69
2792 6059 7.001099 TCTCCAAAGTACTATTTCTTCCGTT 57.999 36.000 0.00 0.00 0.00 4.44
2793 6060 7.095270 TCTCCAAAGTACTATTTCTTCCGTTC 58.905 38.462 0.00 0.00 0.00 3.95
2794 6061 7.001099 TCCAAAGTACTATTTCTTCCGTTCT 57.999 36.000 0.00 0.00 0.00 3.01
2795 6062 7.095270 TCCAAAGTACTATTTCTTCCGTTCTC 58.905 38.462 0.00 0.00 0.00 2.87
2796 6063 6.872020 CCAAAGTACTATTTCTTCCGTTCTCA 59.128 38.462 0.00 0.00 0.00 3.27
2797 6064 7.386848 CCAAAGTACTATTTCTTCCGTTCTCAA 59.613 37.037 0.00 0.00 0.00 3.02
2798 6065 8.770828 CAAAGTACTATTTCTTCCGTTCTCAAA 58.229 33.333 0.00 0.00 0.00 2.69
2799 6066 9.503399 AAAGTACTATTTCTTCCGTTCTCAAAT 57.497 29.630 0.00 0.00 0.00 2.32
2801 6068 9.583765 AGTACTATTTCTTCCGTTCTCAAATAC 57.416 33.333 0.00 0.00 0.00 1.89
2802 6069 9.583765 GTACTATTTCTTCCGTTCTCAAATACT 57.416 33.333 0.00 0.00 0.00 2.12
2815 6082 9.704098 CGTTCTCAAATACTTATTTTTCTAGGC 57.296 33.333 0.00 0.00 33.88 3.93
2830 6097 9.875691 ATTTTTCTAGGCATTTTAAATGGACTC 57.124 29.630 17.89 2.75 0.00 3.36
2831 6098 8.415950 TTTTCTAGGCATTTTAAATGGACTCA 57.584 30.769 17.89 0.00 0.00 3.41
2832 6099 8.415950 TTTCTAGGCATTTTAAATGGACTCAA 57.584 30.769 17.89 2.83 0.00 3.02
2833 6100 8.593945 TTCTAGGCATTTTAAATGGACTCAAT 57.406 30.769 17.89 0.00 0.00 2.57
2834 6101 9.693739 TTCTAGGCATTTTAAATGGACTCAATA 57.306 29.630 17.89 0.52 0.00 1.90
2835 6102 9.866655 TCTAGGCATTTTAAATGGACTCAATAT 57.133 29.630 17.89 0.00 0.00 1.28
2838 6105 8.567948 AGGCATTTTAAATGGACTCAATATACG 58.432 33.333 17.89 0.00 0.00 3.06
2839 6106 7.807907 GGCATTTTAAATGGACTCAATATACGG 59.192 37.037 17.89 0.00 0.00 4.02
2840 6107 8.564574 GCATTTTAAATGGACTCAATATACGGA 58.435 33.333 17.89 0.00 0.00 4.69
2843 6110 7.667043 TTAAATGGACTCAATATACGGATGC 57.333 36.000 0.00 0.00 0.00 3.91
2844 6111 4.890158 ATGGACTCAATATACGGATGCA 57.110 40.909 0.00 0.00 0.00 3.96
2845 6112 4.890158 TGGACTCAATATACGGATGCAT 57.110 40.909 0.00 0.00 0.00 3.96
2846 6113 4.568956 TGGACTCAATATACGGATGCATG 58.431 43.478 2.46 0.00 0.00 4.06
2847 6114 4.040339 TGGACTCAATATACGGATGCATGT 59.960 41.667 2.46 0.00 0.00 3.21
2848 6115 5.245075 TGGACTCAATATACGGATGCATGTA 59.755 40.000 2.46 0.83 0.00 2.29
2849 6116 5.807520 GGACTCAATATACGGATGCATGTAG 59.192 44.000 2.46 0.00 0.00 2.74
2850 6117 6.350194 GGACTCAATATACGGATGCATGTAGA 60.350 42.308 2.46 0.00 0.00 2.59
2851 6118 7.175347 ACTCAATATACGGATGCATGTAGAT 57.825 36.000 2.46 0.78 0.00 1.98
2852 6119 8.293699 ACTCAATATACGGATGCATGTAGATA 57.706 34.615 2.46 0.00 0.00 1.98
2853 6120 8.918116 ACTCAATATACGGATGCATGTAGATAT 58.082 33.333 2.46 0.00 0.00 1.63
2898 6165 8.951787 TTTATTTTATGCCGTATGTAGTCACT 57.048 30.769 0.00 0.00 0.00 3.41
2899 6166 8.951787 TTATTTTATGCCGTATGTAGTCACTT 57.048 30.769 0.00 0.00 0.00 3.16
2902 6169 8.951787 TTTTATGCCGTATGTAGTCACTTATT 57.048 30.769 0.00 0.00 0.00 1.40
2903 6170 7.940178 TTATGCCGTATGTAGTCACTTATTG 57.060 36.000 0.00 0.00 0.00 1.90
2904 6171 5.585820 TGCCGTATGTAGTCACTTATTGA 57.414 39.130 0.00 0.00 0.00 2.57
2905 6172 5.968254 TGCCGTATGTAGTCACTTATTGAA 58.032 37.500 0.00 0.00 35.39 2.69
2906 6173 6.399743 TGCCGTATGTAGTCACTTATTGAAA 58.600 36.000 0.00 0.00 35.39 2.69
2907 6174 7.045416 TGCCGTATGTAGTCACTTATTGAAAT 58.955 34.615 0.00 0.00 35.39 2.17
2908 6175 7.223971 TGCCGTATGTAGTCACTTATTGAAATC 59.776 37.037 0.00 0.00 35.39 2.17
2909 6176 7.438459 GCCGTATGTAGTCACTTATTGAAATCT 59.562 37.037 0.00 0.00 35.39 2.40
2910 6177 9.314321 CCGTATGTAGTCACTTATTGAAATCTT 57.686 33.333 0.00 0.00 35.39 2.40
2938 6205 8.897872 AAAAGACAAGTATTTAGAAACGGAGA 57.102 30.769 0.00 0.00 0.00 3.71
2939 6206 8.535690 AAAGACAAGTATTTAGAAACGGAGAG 57.464 34.615 0.00 0.00 0.00 3.20
2940 6207 7.463961 AGACAAGTATTTAGAAACGGAGAGA 57.536 36.000 0.00 0.00 0.00 3.10
2941 6208 7.540299 AGACAAGTATTTAGAAACGGAGAGAG 58.460 38.462 0.00 0.00 0.00 3.20
2942 6209 7.177041 AGACAAGTATTTAGAAACGGAGAGAGT 59.823 37.037 0.00 0.00 0.00 3.24
2943 6210 8.345724 ACAAGTATTTAGAAACGGAGAGAGTA 57.654 34.615 0.00 0.00 0.00 2.59
3023 6290 6.227522 TGTGATCTTCCGTTCAAAATGAGTA 58.772 36.000 0.00 0.00 0.00 2.59
3024 6291 6.878923 TGTGATCTTCCGTTCAAAATGAGTAT 59.121 34.615 0.00 0.00 0.00 2.12
3025 6292 8.038351 TGTGATCTTCCGTTCAAAATGAGTATA 58.962 33.333 0.00 0.00 0.00 1.47
3043 6310 8.840200 TGAGTATATCTTTTTGAGTACTCCCT 57.160 34.615 20.11 0.17 41.33 4.20
3044 6311 8.915036 TGAGTATATCTTTTTGAGTACTCCCTC 58.085 37.037 20.11 8.07 41.33 4.30
3045 6312 9.138596 GAGTATATCTTTTTGAGTACTCCCTCT 57.861 37.037 20.11 1.67 38.97 3.69
3046 6313 8.919145 AGTATATCTTTTTGAGTACTCCCTCTG 58.081 37.037 20.11 7.97 29.59 3.35
3047 6314 7.741554 ATATCTTTTTGAGTACTCCCTCTGT 57.258 36.000 20.11 4.03 32.50 3.41
3048 6315 8.840200 ATATCTTTTTGAGTACTCCCTCTGTA 57.160 34.615 20.11 5.99 32.50 2.74
3049 6316 6.989155 TCTTTTTGAGTACTCCCTCTGTAA 57.011 37.500 20.11 3.03 32.50 2.41
3050 6317 7.369551 TCTTTTTGAGTACTCCCTCTGTAAA 57.630 36.000 20.11 9.01 32.50 2.01
3051 6318 7.215085 TCTTTTTGAGTACTCCCTCTGTAAAC 58.785 38.462 20.11 0.00 32.50 2.01
3052 6319 6.742559 TTTTGAGTACTCCCTCTGTAAACT 57.257 37.500 20.11 0.00 32.50 2.66
3053 6320 7.844493 TTTTGAGTACTCCCTCTGTAAACTA 57.156 36.000 20.11 0.00 32.50 2.24
3054 6321 7.844493 TTTGAGTACTCCCTCTGTAAACTAA 57.156 36.000 20.11 0.11 32.50 2.24
3055 6322 8.431910 TTTGAGTACTCCCTCTGTAAACTAAT 57.568 34.615 20.11 0.00 32.50 1.73
3056 6323 9.537852 TTTGAGTACTCCCTCTGTAAACTAATA 57.462 33.333 20.11 0.00 32.50 0.98
3057 6324 9.710818 TTGAGTACTCCCTCTGTAAACTAATAT 57.289 33.333 20.11 0.00 32.50 1.28
3126 6393 8.713737 ATTAATTTACGAAGGGAGTACTTGAC 57.286 34.615 0.00 0.00 0.00 3.18
3127 6394 5.733620 ATTTACGAAGGGAGTACTTGACA 57.266 39.130 0.00 0.00 0.00 3.58
3128 6395 4.778534 TTACGAAGGGAGTACTTGACAG 57.221 45.455 0.00 0.00 0.00 3.51
3129 6396 1.272769 ACGAAGGGAGTACTTGACAGC 59.727 52.381 0.00 0.00 0.00 4.40
3130 6397 1.272490 CGAAGGGAGTACTTGACAGCA 59.728 52.381 0.00 0.00 0.00 4.41
3131 6398 2.288825 CGAAGGGAGTACTTGACAGCAA 60.289 50.000 0.00 0.00 0.00 3.91
3197 6464 0.172352 CACTCGAGCTGGAGAGTTCC 59.828 60.000 29.80 0.00 44.46 3.62
3198 6465 0.968393 ACTCGAGCTGGAGAGTTCCC 60.968 60.000 29.80 0.00 44.46 3.97
3199 6466 0.967887 CTCGAGCTGGAGAGTTCCCA 60.968 60.000 20.14 0.00 43.33 4.37
3200 6467 0.324738 TCGAGCTGGAGAGTTCCCAT 60.325 55.000 0.00 0.00 43.33 4.00
3201 6468 0.179089 CGAGCTGGAGAGTTCCCATG 60.179 60.000 0.00 0.00 43.33 3.66
3202 6469 0.908198 GAGCTGGAGAGTTCCCATGT 59.092 55.000 0.00 0.00 43.33 3.21
3203 6470 2.111384 GAGCTGGAGAGTTCCCATGTA 58.889 52.381 0.00 0.00 43.33 2.29
3204 6471 2.703007 GAGCTGGAGAGTTCCCATGTAT 59.297 50.000 0.00 0.00 43.33 2.29
3205 6472 2.437281 AGCTGGAGAGTTCCCATGTATG 59.563 50.000 0.00 0.00 43.33 2.39
3206 6473 2.171448 GCTGGAGAGTTCCCATGTATGT 59.829 50.000 0.00 0.00 43.33 2.29
3207 6474 3.388024 GCTGGAGAGTTCCCATGTATGTA 59.612 47.826 0.00 0.00 43.33 2.29
3208 6475 4.141711 GCTGGAGAGTTCCCATGTATGTAA 60.142 45.833 0.00 0.00 43.33 2.41
3209 6476 5.455326 GCTGGAGAGTTCCCATGTATGTAAT 60.455 44.000 0.00 0.00 43.33 1.89
3210 6477 6.239600 GCTGGAGAGTTCCCATGTATGTAATA 60.240 42.308 0.00 0.00 43.33 0.98
3211 6478 7.062749 TGGAGAGTTCCCATGTATGTAATAC 57.937 40.000 0.00 0.00 45.44 1.89
3212 6479 6.844388 TGGAGAGTTCCCATGTATGTAATACT 59.156 38.462 0.00 0.00 45.44 2.12
3213 6480 7.347222 TGGAGAGTTCCCATGTATGTAATACTT 59.653 37.037 0.00 0.00 45.44 2.24
3214 6481 8.211629 GGAGAGTTCCCATGTATGTAATACTTT 58.788 37.037 0.00 0.00 42.86 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.974158 CACGTTCATATTCTACTCTCACTGG 59.026 44.000 0.00 0.00 0.00 4.00
1 2 5.974158 CCACGTTCATATTCTACTCTCACTG 59.026 44.000 0.00 0.00 0.00 3.66
2 3 5.450688 GCCACGTTCATATTCTACTCTCACT 60.451 44.000 0.00 0.00 0.00 3.41
3 4 4.740695 GCCACGTTCATATTCTACTCTCAC 59.259 45.833 0.00 0.00 0.00 3.51
4 5 4.202121 GGCCACGTTCATATTCTACTCTCA 60.202 45.833 0.00 0.00 0.00 3.27
5 6 4.299978 GGCCACGTTCATATTCTACTCTC 58.700 47.826 0.00 0.00 0.00 3.20
6 7 3.243434 CGGCCACGTTCATATTCTACTCT 60.243 47.826 2.24 0.00 34.81 3.24
7 8 3.050619 CGGCCACGTTCATATTCTACTC 58.949 50.000 2.24 0.00 34.81 2.59
8 9 2.223971 CCGGCCACGTTCATATTCTACT 60.224 50.000 2.24 0.00 38.78 2.57
9 10 2.132762 CCGGCCACGTTCATATTCTAC 58.867 52.381 2.24 0.00 38.78 2.59
10 11 1.069513 CCCGGCCACGTTCATATTCTA 59.930 52.381 2.24 0.00 38.78 2.10
11 12 0.179056 CCCGGCCACGTTCATATTCT 60.179 55.000 2.24 0.00 38.78 2.40
12 13 0.179067 TCCCGGCCACGTTCATATTC 60.179 55.000 2.24 0.00 38.78 1.75
13 14 0.472471 ATCCCGGCCACGTTCATATT 59.528 50.000 2.24 0.00 38.78 1.28
14 15 0.034896 GATCCCGGCCACGTTCATAT 59.965 55.000 2.24 0.00 38.78 1.78
15 16 1.331399 TGATCCCGGCCACGTTCATA 61.331 55.000 2.24 0.00 38.78 2.15
16 17 1.983119 ATGATCCCGGCCACGTTCAT 61.983 55.000 2.24 5.20 38.78 2.57
17 18 2.587322 GATGATCCCGGCCACGTTCA 62.587 60.000 2.24 2.76 38.78 3.18
18 19 1.887707 GATGATCCCGGCCACGTTC 60.888 63.158 2.24 0.00 38.78 3.95
19 20 1.910580 AAGATGATCCCGGCCACGTT 61.911 55.000 2.24 0.00 38.78 3.99
20 21 1.910580 AAAGATGATCCCGGCCACGT 61.911 55.000 2.24 0.00 38.78 4.49
21 22 0.748005 AAAAGATGATCCCGGCCACG 60.748 55.000 2.24 0.00 40.55 4.94
22 23 1.474330 AAAAAGATGATCCCGGCCAC 58.526 50.000 2.24 0.00 0.00 5.01
23 24 3.998560 AAAAAGATGATCCCGGCCA 57.001 47.368 2.24 0.00 0.00 5.36
38 39 2.025155 TGTTTGGCGCACTAGGAAAAA 58.975 42.857 10.83 0.00 0.00 1.94
39 40 1.681538 TGTTTGGCGCACTAGGAAAA 58.318 45.000 10.83 0.00 0.00 2.29
40 41 1.904287 ATGTTTGGCGCACTAGGAAA 58.096 45.000 10.83 0.00 0.00 3.13
41 42 2.772077 TATGTTTGGCGCACTAGGAA 57.228 45.000 10.83 0.00 0.00 3.36
42 43 3.275617 AATATGTTTGGCGCACTAGGA 57.724 42.857 10.83 0.00 0.00 2.94
43 44 4.024048 CCTAAATATGTTTGGCGCACTAGG 60.024 45.833 10.83 2.11 0.00 3.02
44 45 4.814234 TCCTAAATATGTTTGGCGCACTAG 59.186 41.667 10.83 0.00 0.00 2.57
45 46 4.771903 TCCTAAATATGTTTGGCGCACTA 58.228 39.130 10.83 0.00 0.00 2.74
46 47 3.616219 TCCTAAATATGTTTGGCGCACT 58.384 40.909 10.83 0.00 0.00 4.40
47 48 4.568152 ATCCTAAATATGTTTGGCGCAC 57.432 40.909 10.83 0.00 0.00 5.34
48 49 5.240623 CCTAATCCTAAATATGTTTGGCGCA 59.759 40.000 10.83 0.00 0.00 6.09
49 50 5.472137 TCCTAATCCTAAATATGTTTGGCGC 59.528 40.000 0.00 0.00 0.00 6.53
50 51 7.687941 ATCCTAATCCTAAATATGTTTGGCG 57.312 36.000 0.00 0.00 0.00 5.69
55 56 9.734984 CCGGTTTATCCTAATCCTAAATATGTT 57.265 33.333 0.00 0.00 0.00 2.71
56 57 8.326529 CCCGGTTTATCCTAATCCTAAATATGT 58.673 37.037 0.00 0.00 0.00 2.29
57 58 8.545472 TCCCGGTTTATCCTAATCCTAAATATG 58.455 37.037 0.00 0.00 0.00 1.78
58 59 8.689707 TCCCGGTTTATCCTAATCCTAAATAT 57.310 34.615 0.00 0.00 0.00 1.28
59 60 8.689707 ATCCCGGTTTATCCTAATCCTAAATA 57.310 34.615 0.00 0.00 0.00 1.40
60 61 7.238933 TGATCCCGGTTTATCCTAATCCTAAAT 59.761 37.037 0.00 0.00 0.00 1.40
61 62 6.559539 TGATCCCGGTTTATCCTAATCCTAAA 59.440 38.462 0.00 0.00 0.00 1.85
62 63 6.086095 TGATCCCGGTTTATCCTAATCCTAA 58.914 40.000 0.00 0.00 0.00 2.69
63 64 5.657446 TGATCCCGGTTTATCCTAATCCTA 58.343 41.667 0.00 0.00 0.00 2.94
64 65 4.499472 TGATCCCGGTTTATCCTAATCCT 58.501 43.478 0.00 0.00 0.00 3.24
65 66 4.903045 TGATCCCGGTTTATCCTAATCC 57.097 45.455 0.00 0.00 0.00 3.01
66 67 6.531021 TCTTTGATCCCGGTTTATCCTAATC 58.469 40.000 0.00 0.00 0.00 1.75
67 68 6.329197 TCTCTTTGATCCCGGTTTATCCTAAT 59.671 38.462 0.00 0.00 0.00 1.73
68 69 5.664006 TCTCTTTGATCCCGGTTTATCCTAA 59.336 40.000 0.00 0.00 0.00 2.69
69 70 5.213519 TCTCTTTGATCCCGGTTTATCCTA 58.786 41.667 0.00 0.00 0.00 2.94
70 71 4.037927 TCTCTTTGATCCCGGTTTATCCT 58.962 43.478 0.00 0.00 0.00 3.24
71 72 4.417426 TCTCTTTGATCCCGGTTTATCC 57.583 45.455 0.00 0.00 0.00 2.59
81 82 8.691797 AAGTTAGTACTCTGATCTCTTTGATCC 58.308 37.037 0.00 0.00 41.25 3.36
82 83 9.730420 GAAGTTAGTACTCTGATCTCTTTGATC 57.270 37.037 0.00 0.00 41.78 2.92
83 84 9.249053 TGAAGTTAGTACTCTGATCTCTTTGAT 57.751 33.333 0.00 0.00 33.70 2.57
84 85 8.637196 TGAAGTTAGTACTCTGATCTCTTTGA 57.363 34.615 0.00 0.00 31.99 2.69
85 86 9.352784 CTTGAAGTTAGTACTCTGATCTCTTTG 57.647 37.037 0.00 0.00 31.99 2.77
86 87 8.527810 CCTTGAAGTTAGTACTCTGATCTCTTT 58.472 37.037 0.00 0.00 31.99 2.52
87 88 7.891183 TCCTTGAAGTTAGTACTCTGATCTCTT 59.109 37.037 0.00 0.00 31.99 2.85
88 89 7.406916 TCCTTGAAGTTAGTACTCTGATCTCT 58.593 38.462 0.00 0.00 31.99 3.10
89 90 7.633193 TCCTTGAAGTTAGTACTCTGATCTC 57.367 40.000 0.00 0.00 31.99 2.75
90 91 8.602472 AATCCTTGAAGTTAGTACTCTGATCT 57.398 34.615 0.00 0.00 31.99 2.75
91 92 9.092876 CAAATCCTTGAAGTTAGTACTCTGATC 57.907 37.037 0.00 0.00 34.14 2.92
92 93 8.816894 TCAAATCCTTGAAGTTAGTACTCTGAT 58.183 33.333 0.00 0.00 38.65 2.90
93 94 8.190326 TCAAATCCTTGAAGTTAGTACTCTGA 57.810 34.615 0.00 0.00 38.65 3.27
94 95 8.833231 TTCAAATCCTTGAAGTTAGTACTCTG 57.167 34.615 0.00 0.00 44.76 3.35
106 107 4.722526 TCCTCACCTTCAAATCCTTGAA 57.277 40.909 0.77 0.77 46.88 2.69
107 108 4.934797 ATCCTCACCTTCAAATCCTTGA 57.065 40.909 0.00 0.00 39.87 3.02
108 109 5.244626 ACAAATCCTCACCTTCAAATCCTTG 59.755 40.000 0.00 0.00 0.00 3.61
109 110 5.397360 ACAAATCCTCACCTTCAAATCCTT 58.603 37.500 0.00 0.00 0.00 3.36
110 111 5.003096 ACAAATCCTCACCTTCAAATCCT 57.997 39.130 0.00 0.00 0.00 3.24
111 112 7.032377 GATACAAATCCTCACCTTCAAATCC 57.968 40.000 0.00 0.00 0.00 3.01
126 127 0.586802 GAAGCCGCCGGATACAAATC 59.413 55.000 7.68 0.00 0.00 2.17
127 128 0.180406 AGAAGCCGCCGGATACAAAT 59.820 50.000 7.68 0.00 0.00 2.32
128 129 0.825410 TAGAAGCCGCCGGATACAAA 59.175 50.000 7.68 0.00 0.00 2.83
129 130 0.103572 GTAGAAGCCGCCGGATACAA 59.896 55.000 7.68 0.00 0.00 2.41
130 131 1.038681 TGTAGAAGCCGCCGGATACA 61.039 55.000 7.68 7.09 0.00 2.29
131 132 0.103572 TTGTAGAAGCCGCCGGATAC 59.896 55.000 7.68 4.27 0.00 2.24
132 133 0.103572 GTTGTAGAAGCCGCCGGATA 59.896 55.000 7.68 0.00 0.00 2.59
133 134 1.153429 GTTGTAGAAGCCGCCGGAT 60.153 57.895 7.68 0.00 0.00 4.18
134 135 2.263540 GTTGTAGAAGCCGCCGGA 59.736 61.111 7.68 0.00 0.00 5.14
135 136 2.818274 GGTTGTAGAAGCCGCCGG 60.818 66.667 0.00 0.00 0.00 6.13
136 137 1.810030 GAGGTTGTAGAAGCCGCCG 60.810 63.158 0.00 0.00 0.00 6.46
137 138 0.741221 CTGAGGTTGTAGAAGCCGCC 60.741 60.000 0.00 0.00 0.00 6.13
138 139 0.246635 TCTGAGGTTGTAGAAGCCGC 59.753 55.000 0.00 0.00 0.00 6.53
139 140 1.546476 ACTCTGAGGTTGTAGAAGCCG 59.454 52.381 9.85 0.00 0.00 5.52
140 141 3.686916 AACTCTGAGGTTGTAGAAGCC 57.313 47.619 9.85 0.00 0.00 4.35
141 142 7.387948 TGAAATAAACTCTGAGGTTGTAGAAGC 59.612 37.037 17.94 0.00 0.00 3.86
142 143 8.833231 TGAAATAAACTCTGAGGTTGTAGAAG 57.167 34.615 17.94 0.00 0.00 2.85
143 144 8.647796 TCTGAAATAAACTCTGAGGTTGTAGAA 58.352 33.333 17.94 0.00 0.00 2.10
144 145 8.088981 GTCTGAAATAAACTCTGAGGTTGTAGA 58.911 37.037 17.94 8.38 0.00 2.59
145 146 8.091449 AGTCTGAAATAAACTCTGAGGTTGTAG 58.909 37.037 17.94 6.22 0.00 2.74
146 147 7.963532 AGTCTGAAATAAACTCTGAGGTTGTA 58.036 34.615 17.94 0.00 0.00 2.41
147 148 6.831976 AGTCTGAAATAAACTCTGAGGTTGT 58.168 36.000 17.94 8.61 0.00 3.32
148 149 7.442364 TGAAGTCTGAAATAAACTCTGAGGTTG 59.558 37.037 17.94 0.18 0.00 3.77
149 150 7.442666 GTGAAGTCTGAAATAAACTCTGAGGTT 59.557 37.037 13.23 13.23 0.00 3.50
150 151 6.931840 GTGAAGTCTGAAATAAACTCTGAGGT 59.068 38.462 9.85 0.00 0.00 3.85
151 152 7.158021 AGTGAAGTCTGAAATAAACTCTGAGG 58.842 38.462 9.85 0.00 0.00 3.86
152 153 7.869937 TGAGTGAAGTCTGAAATAAACTCTGAG 59.130 37.037 2.45 2.45 35.08 3.35
153 154 7.726216 TGAGTGAAGTCTGAAATAAACTCTGA 58.274 34.615 0.00 0.00 35.08 3.27
154 155 7.953158 TGAGTGAAGTCTGAAATAAACTCTG 57.047 36.000 0.00 0.00 35.08 3.35
155 156 8.207545 AGTTGAGTGAAGTCTGAAATAAACTCT 58.792 33.333 0.00 0.00 35.08 3.24
156 157 8.371770 AGTTGAGTGAAGTCTGAAATAAACTC 57.628 34.615 0.00 0.00 34.70 3.01
157 158 9.832445 TTAGTTGAGTGAAGTCTGAAATAAACT 57.168 29.630 0.00 0.00 0.00 2.66
160 161 9.996554 TGATTAGTTGAGTGAAGTCTGAAATAA 57.003 29.630 0.00 0.00 29.59 1.40
161 162 9.645059 CTGATTAGTTGAGTGAAGTCTGAAATA 57.355 33.333 0.00 0.00 0.00 1.40
162 163 7.118971 GCTGATTAGTTGAGTGAAGTCTGAAAT 59.881 37.037 0.00 0.00 0.00 2.17
163 164 6.425114 GCTGATTAGTTGAGTGAAGTCTGAAA 59.575 38.462 0.00 0.00 0.00 2.69
164 165 5.928839 GCTGATTAGTTGAGTGAAGTCTGAA 59.071 40.000 0.00 0.00 0.00 3.02
165 166 5.473931 GCTGATTAGTTGAGTGAAGTCTGA 58.526 41.667 0.00 0.00 0.00 3.27
166 167 4.629200 GGCTGATTAGTTGAGTGAAGTCTG 59.371 45.833 0.00 0.00 0.00 3.51
167 168 4.284490 TGGCTGATTAGTTGAGTGAAGTCT 59.716 41.667 0.00 0.00 0.00 3.24
168 169 4.569943 TGGCTGATTAGTTGAGTGAAGTC 58.430 43.478 0.00 0.00 0.00 3.01
169 170 4.564406 CCTGGCTGATTAGTTGAGTGAAGT 60.564 45.833 0.00 0.00 0.00 3.01
170 171 3.937706 CCTGGCTGATTAGTTGAGTGAAG 59.062 47.826 0.00 0.00 0.00 3.02
171 172 3.307691 CCCTGGCTGATTAGTTGAGTGAA 60.308 47.826 0.00 0.00 0.00 3.18
172 173 2.237143 CCCTGGCTGATTAGTTGAGTGA 59.763 50.000 0.00 0.00 0.00 3.41
173 174 2.237143 TCCCTGGCTGATTAGTTGAGTG 59.763 50.000 0.00 0.00 0.00 3.51
174 175 2.551270 TCCCTGGCTGATTAGTTGAGT 58.449 47.619 0.00 0.00 0.00 3.41
175 176 3.634397 TTCCCTGGCTGATTAGTTGAG 57.366 47.619 0.00 0.00 0.00 3.02
176 177 4.380843 TTTTCCCTGGCTGATTAGTTGA 57.619 40.909 0.00 0.00 0.00 3.18
407 3491 4.142966 GCAACCGTTGGATCAAACTAGTAC 60.143 45.833 13.12 1.97 0.00 2.73
408 3492 3.998341 GCAACCGTTGGATCAAACTAGTA 59.002 43.478 13.12 0.00 0.00 1.82
409 3493 2.812011 GCAACCGTTGGATCAAACTAGT 59.188 45.455 13.12 5.66 0.00 2.57
410 3494 2.159707 CGCAACCGTTGGATCAAACTAG 60.160 50.000 13.12 5.05 0.00 2.57
610 3699 3.963124 GACGGGGAAGGGGACGGTA 62.963 68.421 0.00 0.00 0.00 4.02
644 3733 4.247380 GAGCGGCATCTGGAGGGG 62.247 72.222 1.45 0.00 0.00 4.79
664 3753 3.161450 GGGCTGATCGGGTGGCTA 61.161 66.667 3.14 0.00 0.00 3.93
959 4048 1.485838 GCAGATCTGTGCCGACGATG 61.486 60.000 23.38 0.00 37.49 3.84
960 4049 1.227089 GCAGATCTGTGCCGACGAT 60.227 57.895 23.38 0.00 37.49 3.73
968 4057 2.163390 CCGACAGCGCAGATCTGTG 61.163 63.158 28.24 28.24 44.09 3.66
1066 4158 4.020617 CAGCGACCTCTGCCCCAA 62.021 66.667 0.00 0.00 0.00 4.12
1739 4831 6.207221 TGTTATTGCAAAGCTTCTTCATCTGA 59.793 34.615 1.71 0.00 0.00 3.27
1754 4846 5.697473 TGAGGACGAAAATGTTATTGCAA 57.303 34.783 0.00 0.00 0.00 4.08
1947 5039 1.000496 TTCTCCTCCTCTTCCTCCGA 59.000 55.000 0.00 0.00 0.00 4.55
1955 5047 1.691196 CGCTCATCTTCTCCTCCTCT 58.309 55.000 0.00 0.00 0.00 3.69
2352 5480 3.413846 AAACCGGAAAGGAGGAAGTAC 57.586 47.619 9.46 0.00 45.00 2.73
2353 5481 5.364735 CCTATAAACCGGAAAGGAGGAAGTA 59.635 44.000 9.46 0.00 45.00 2.24
2354 5482 4.163649 CCTATAAACCGGAAAGGAGGAAGT 59.836 45.833 9.46 0.00 45.00 3.01
2355 5483 4.407945 TCCTATAAACCGGAAAGGAGGAAG 59.592 45.833 9.46 0.00 45.00 3.46
2356 5484 4.364470 TCCTATAAACCGGAAAGGAGGAA 58.636 43.478 9.46 0.00 45.00 3.36
2357 5485 3.965347 CTCCTATAAACCGGAAAGGAGGA 59.035 47.826 22.98 19.40 46.37 3.71
2358 5486 4.338379 CTCCTATAAACCGGAAAGGAGG 57.662 50.000 22.98 17.09 46.37 4.30
2360 5488 6.842807 AGATAACTCCTATAAACCGGAAAGGA 59.157 38.462 9.46 11.36 45.00 3.36
2361 5489 7.153315 GAGATAACTCCTATAAACCGGAAAGG 58.847 42.308 9.46 7.23 40.53 3.11
2362 5490 7.723324 TGAGATAACTCCTATAAACCGGAAAG 58.277 38.462 9.46 0.00 41.99 2.62
2363 5491 7.664552 TGAGATAACTCCTATAAACCGGAAA 57.335 36.000 9.46 0.00 41.99 3.13
2364 5492 7.664552 TTGAGATAACTCCTATAAACCGGAA 57.335 36.000 9.46 0.00 41.99 4.30
2365 5493 7.664552 TTTGAGATAACTCCTATAAACCGGA 57.335 36.000 9.46 0.00 41.99 5.14
2366 5494 8.904099 ATTTTGAGATAACTCCTATAAACCGG 57.096 34.615 0.00 0.00 41.99 5.28
2367 5495 9.765795 AGATTTTGAGATAACTCCTATAAACCG 57.234 33.333 0.00 0.00 41.99 4.44
2409 5537 9.729281 ATGAAAAACAATCAAATTGAGCCTTAT 57.271 25.926 1.10 0.00 42.83 1.73
2410 5538 9.206870 GATGAAAAACAATCAAATTGAGCCTTA 57.793 29.630 1.10 0.00 42.83 2.69
2411 5539 7.716123 TGATGAAAAACAATCAAATTGAGCCTT 59.284 29.630 1.10 0.00 42.83 4.35
2412 5540 7.172019 GTGATGAAAAACAATCAAATTGAGCCT 59.828 33.333 1.10 0.00 42.83 4.58
2413 5541 7.041916 TGTGATGAAAAACAATCAAATTGAGCC 60.042 33.333 1.10 0.00 42.83 4.70
2414 5542 7.853524 TGTGATGAAAAACAATCAAATTGAGC 58.146 30.769 1.10 0.00 42.83 4.26
2415 5543 9.805966 CATGTGATGAAAAACAATCAAATTGAG 57.194 29.630 1.10 0.00 42.83 3.02
2416 5544 9.327628 ACATGTGATGAAAAACAATCAAATTGA 57.672 25.926 0.00 0.00 42.83 2.57
2417 5545 9.938670 AACATGTGATGAAAAACAATCAAATTG 57.061 25.926 0.00 0.00 45.59 2.32
2419 5547 9.327628 TGAACATGTGATGAAAAACAATCAAAT 57.672 25.926 0.00 0.00 0.00 2.32
2420 5548 8.713737 TGAACATGTGATGAAAAACAATCAAA 57.286 26.923 0.00 0.00 0.00 2.69
2421 5549 8.196103 TCTGAACATGTGATGAAAAACAATCAA 58.804 29.630 0.00 0.00 0.00 2.57
2422 5550 7.714703 TCTGAACATGTGATGAAAAACAATCA 58.285 30.769 0.00 0.00 0.00 2.57
2423 5551 8.752766 ATCTGAACATGTGATGAAAAACAATC 57.247 30.769 0.00 0.00 0.00 2.67
2424 5552 9.550406 AAATCTGAACATGTGATGAAAAACAAT 57.450 25.926 0.00 0.00 0.00 2.71
2425 5553 8.945481 AAATCTGAACATGTGATGAAAAACAA 57.055 26.923 0.00 0.00 0.00 2.83
2426 5554 8.196103 TGAAATCTGAACATGTGATGAAAAACA 58.804 29.630 0.00 0.00 0.00 2.83
2427 5555 8.578308 TGAAATCTGAACATGTGATGAAAAAC 57.422 30.769 0.00 0.00 0.00 2.43
2428 5556 9.251792 CTTGAAATCTGAACATGTGATGAAAAA 57.748 29.630 0.00 0.00 0.00 1.94
2429 5557 7.868922 CCTTGAAATCTGAACATGTGATGAAAA 59.131 33.333 0.00 0.00 0.00 2.29
2430 5558 7.014518 ACCTTGAAATCTGAACATGTGATGAAA 59.985 33.333 0.00 0.00 0.00 2.69
2431 5559 6.491062 ACCTTGAAATCTGAACATGTGATGAA 59.509 34.615 0.00 0.00 0.00 2.57
2432 5560 6.005823 ACCTTGAAATCTGAACATGTGATGA 58.994 36.000 0.00 0.00 0.00 2.92
2433 5561 6.090783 CACCTTGAAATCTGAACATGTGATG 58.909 40.000 0.00 0.00 0.00 3.07
2434 5562 5.336213 GCACCTTGAAATCTGAACATGTGAT 60.336 40.000 0.00 0.00 0.00 3.06
2435 5563 4.022935 GCACCTTGAAATCTGAACATGTGA 60.023 41.667 0.00 0.00 0.00 3.58
2436 5564 4.232221 GCACCTTGAAATCTGAACATGTG 58.768 43.478 0.00 0.00 0.00 3.21
2437 5565 3.890756 TGCACCTTGAAATCTGAACATGT 59.109 39.130 0.00 0.00 0.00 3.21
2438 5566 4.508461 TGCACCTTGAAATCTGAACATG 57.492 40.909 0.00 0.00 0.00 3.21
2439 5567 5.733620 AATGCACCTTGAAATCTGAACAT 57.266 34.783 0.00 0.00 0.00 2.71
2440 5568 6.647334 TTAATGCACCTTGAAATCTGAACA 57.353 33.333 0.00 0.00 0.00 3.18
2441 5569 7.814107 TGATTTAATGCACCTTGAAATCTGAAC 59.186 33.333 15.69 0.00 37.39 3.18
2442 5570 7.894708 TGATTTAATGCACCTTGAAATCTGAA 58.105 30.769 15.69 1.53 37.39 3.02
2443 5571 7.465353 TGATTTAATGCACCTTGAAATCTGA 57.535 32.000 15.69 0.00 37.39 3.27
2444 5572 8.600625 CAATGATTTAATGCACCTTGAAATCTG 58.399 33.333 15.69 7.90 37.39 2.90
2445 5573 7.279313 GCAATGATTTAATGCACCTTGAAATCT 59.721 33.333 15.69 5.35 39.81 2.40
2446 5574 7.064847 TGCAATGATTTAATGCACCTTGAAATC 59.935 33.333 0.00 1.22 44.52 2.17
2447 5575 6.879993 TGCAATGATTTAATGCACCTTGAAAT 59.120 30.769 0.00 0.00 44.52 2.17
2448 5576 6.228995 TGCAATGATTTAATGCACCTTGAAA 58.771 32.000 0.00 0.00 44.52 2.69
2449 5577 5.791666 TGCAATGATTTAATGCACCTTGAA 58.208 33.333 0.00 0.00 44.52 2.69
2450 5578 5.402997 TGCAATGATTTAATGCACCTTGA 57.597 34.783 0.00 0.00 44.52 3.02
2467 5595 7.966246 TTTTCTTTCAATACTTGCATGCAAT 57.034 28.000 31.96 22.79 35.20 3.56
2468 5596 7.966246 ATTTTCTTTCAATACTTGCATGCAA 57.034 28.000 30.12 30.12 0.00 4.08
2469 5597 7.656542 TCAATTTTCTTTCAATACTTGCATGCA 59.343 29.630 18.46 18.46 0.00 3.96
2470 5598 7.953710 GTCAATTTTCTTTCAATACTTGCATGC 59.046 33.333 11.82 11.82 0.00 4.06
2471 5599 8.437742 GGTCAATTTTCTTTCAATACTTGCATG 58.562 33.333 0.00 0.00 0.00 4.06
2472 5600 8.149647 TGGTCAATTTTCTTTCAATACTTGCAT 58.850 29.630 0.00 0.00 0.00 3.96
2473 5601 7.495901 TGGTCAATTTTCTTTCAATACTTGCA 58.504 30.769 0.00 0.00 0.00 4.08
2474 5602 7.945033 TGGTCAATTTTCTTTCAATACTTGC 57.055 32.000 0.00 0.00 0.00 4.01
2475 5603 8.479280 CGTTGGTCAATTTTCTTTCAATACTTG 58.521 33.333 0.00 0.00 0.00 3.16
2476 5604 7.169140 GCGTTGGTCAATTTTCTTTCAATACTT 59.831 33.333 0.00 0.00 0.00 2.24
2477 5605 6.640907 GCGTTGGTCAATTTTCTTTCAATACT 59.359 34.615 0.00 0.00 0.00 2.12
2478 5606 6.419413 TGCGTTGGTCAATTTTCTTTCAATAC 59.581 34.615 0.00 0.00 0.00 1.89
2479 5607 6.507900 TGCGTTGGTCAATTTTCTTTCAATA 58.492 32.000 0.00 0.00 0.00 1.90
2480 5608 5.355596 TGCGTTGGTCAATTTTCTTTCAAT 58.644 33.333 0.00 0.00 0.00 2.57
2481 5609 4.748892 TGCGTTGGTCAATTTTCTTTCAA 58.251 34.783 0.00 0.00 0.00 2.69
2482 5610 4.377839 TGCGTTGGTCAATTTTCTTTCA 57.622 36.364 0.00 0.00 0.00 2.69
2483 5611 4.744631 ACATGCGTTGGTCAATTTTCTTTC 59.255 37.500 0.00 0.00 0.00 2.62
2484 5612 4.692228 ACATGCGTTGGTCAATTTTCTTT 58.308 34.783 0.00 0.00 0.00 2.52
2485 5613 4.320608 ACATGCGTTGGTCAATTTTCTT 57.679 36.364 0.00 0.00 0.00 2.52
2486 5614 4.518970 AGTACATGCGTTGGTCAATTTTCT 59.481 37.500 0.00 0.00 0.00 2.52
2487 5615 4.794169 AGTACATGCGTTGGTCAATTTTC 58.206 39.130 0.00 0.00 0.00 2.29
2488 5616 4.846779 AGTACATGCGTTGGTCAATTTT 57.153 36.364 0.00 0.00 0.00 1.82
2489 5617 4.846779 AAGTACATGCGTTGGTCAATTT 57.153 36.364 0.00 0.00 0.00 1.82
2490 5618 4.846779 AAAGTACATGCGTTGGTCAATT 57.153 36.364 0.00 0.00 0.00 2.32
2491 5619 5.676079 GCATAAAGTACATGCGTTGGTCAAT 60.676 40.000 1.35 0.00 39.43 2.57
2492 5620 4.378978 GCATAAAGTACATGCGTTGGTCAA 60.379 41.667 1.35 0.00 39.43 3.18
2493 5621 3.126171 GCATAAAGTACATGCGTTGGTCA 59.874 43.478 1.35 0.00 39.43 4.02
2494 5622 3.680789 GCATAAAGTACATGCGTTGGTC 58.319 45.455 1.35 0.00 39.43 4.02
2495 5623 3.757745 GCATAAAGTACATGCGTTGGT 57.242 42.857 1.35 0.00 39.43 3.67
2556 5684 9.715123 GTTTGCAAAAGCACTTAATTAATGTTT 57.285 25.926 14.67 2.04 0.00 2.83
2557 5685 9.108284 AGTTTGCAAAAGCACTTAATTAATGTT 57.892 25.926 14.67 0.00 0.00 2.71
2558 5686 8.661352 AGTTTGCAAAAGCACTTAATTAATGT 57.339 26.923 14.67 0.00 0.00 2.71
2560 5688 9.757227 TGTAGTTTGCAAAAGCACTTAATTAAT 57.243 25.926 14.67 0.00 0.00 1.40
2561 5689 9.587772 TTGTAGTTTGCAAAAGCACTTAATTAA 57.412 25.926 14.67 0.00 0.00 1.40
2562 5690 9.587772 TTTGTAGTTTGCAAAAGCACTTAATTA 57.412 25.926 14.67 0.00 33.51 1.40
2563 5691 8.485976 TTTGTAGTTTGCAAAAGCACTTAATT 57.514 26.923 14.67 0.00 33.51 1.40
2564 5692 8.485976 TTTTGTAGTTTGCAAAAGCACTTAAT 57.514 26.923 14.67 0.00 39.83 1.40
2565 5693 7.891183 TTTTGTAGTTTGCAAAAGCACTTAA 57.109 28.000 14.67 4.20 39.83 1.85
2566 5694 7.600752 ACTTTTTGTAGTTTGCAAAAGCACTTA 59.399 29.630 14.67 0.00 43.70 2.24
2567 5695 6.426633 ACTTTTTGTAGTTTGCAAAAGCACTT 59.573 30.769 14.67 0.00 43.70 3.16
2568 5696 5.931724 ACTTTTTGTAGTTTGCAAAAGCACT 59.068 32.000 14.67 10.11 43.70 4.40
2569 5697 6.164408 ACTTTTTGTAGTTTGCAAAAGCAC 57.836 33.333 14.67 12.12 43.70 4.40
2570 5698 8.485976 AATACTTTTTGTAGTTTGCAAAAGCA 57.514 26.923 14.67 10.19 43.70 3.91
2571 5699 8.061857 GGAATACTTTTTGTAGTTTGCAAAAGC 58.938 33.333 14.67 7.63 43.70 3.51
2572 5700 9.092876 TGGAATACTTTTTGTAGTTTGCAAAAG 57.907 29.630 14.67 7.55 43.70 2.27
2573 5701 9.606631 ATGGAATACTTTTTGTAGTTTGCAAAA 57.393 25.926 14.67 0.00 42.03 2.44
2574 5702 9.255304 GATGGAATACTTTTTGTAGTTTGCAAA 57.745 29.630 8.05 8.05 34.24 3.68
2575 5703 8.417106 TGATGGAATACTTTTTGTAGTTTGCAA 58.583 29.630 0.00 0.00 34.24 4.08
2576 5704 7.865385 GTGATGGAATACTTTTTGTAGTTTGCA 59.135 33.333 0.00 0.00 34.24 4.08
2577 5705 8.082242 AGTGATGGAATACTTTTTGTAGTTTGC 58.918 33.333 0.00 0.00 34.24 3.68
2578 5706 9.612620 GAGTGATGGAATACTTTTTGTAGTTTG 57.387 33.333 0.00 0.00 34.24 2.93
2579 5707 9.349713 TGAGTGATGGAATACTTTTTGTAGTTT 57.650 29.630 0.00 0.00 34.24 2.66
2580 5708 8.784043 GTGAGTGATGGAATACTTTTTGTAGTT 58.216 33.333 0.00 0.00 34.24 2.24
2581 5709 7.390718 GGTGAGTGATGGAATACTTTTTGTAGT 59.609 37.037 0.00 0.00 34.24 2.73
2582 5710 7.390440 TGGTGAGTGATGGAATACTTTTTGTAG 59.610 37.037 0.00 0.00 34.24 2.74
2583 5711 7.227873 TGGTGAGTGATGGAATACTTTTTGTA 58.772 34.615 0.00 0.00 35.37 2.41
2584 5712 6.068010 TGGTGAGTGATGGAATACTTTTTGT 58.932 36.000 0.00 0.00 0.00 2.83
2585 5713 6.573664 TGGTGAGTGATGGAATACTTTTTG 57.426 37.500 0.00 0.00 0.00 2.44
2586 5714 7.177878 AGATGGTGAGTGATGGAATACTTTTT 58.822 34.615 0.00 0.00 0.00 1.94
2587 5715 6.725364 AGATGGTGAGTGATGGAATACTTTT 58.275 36.000 0.00 0.00 0.00 2.27
2588 5716 6.319048 AGATGGTGAGTGATGGAATACTTT 57.681 37.500 0.00 0.00 0.00 2.66
2589 5717 5.965033 AGATGGTGAGTGATGGAATACTT 57.035 39.130 0.00 0.00 0.00 2.24
2590 5718 7.015680 AGATAGATGGTGAGTGATGGAATACT 58.984 38.462 0.00 0.00 0.00 2.12
2591 5719 7.238486 AGATAGATGGTGAGTGATGGAATAC 57.762 40.000 0.00 0.00 0.00 1.89
2592 5720 7.256439 CCAAGATAGATGGTGAGTGATGGAATA 60.256 40.741 0.00 0.00 33.08 1.75
2593 5721 6.465464 CCAAGATAGATGGTGAGTGATGGAAT 60.465 42.308 0.00 0.00 33.08 3.01
2594 5722 5.163269 CCAAGATAGATGGTGAGTGATGGAA 60.163 44.000 0.00 0.00 33.08 3.53
2595 5723 4.346127 CCAAGATAGATGGTGAGTGATGGA 59.654 45.833 0.00 0.00 33.08 3.41
2596 5724 4.639334 CCAAGATAGATGGTGAGTGATGG 58.361 47.826 0.00 0.00 33.08 3.51
2606 5734 4.760530 TCTCACCAACCAAGATAGATGG 57.239 45.455 0.00 0.00 43.84 3.51
2607 5735 7.636150 AAAATCTCACCAACCAAGATAGATG 57.364 36.000 0.00 0.00 0.00 2.90
2608 5736 7.890127 TGAAAAATCTCACCAACCAAGATAGAT 59.110 33.333 0.00 0.00 0.00 1.98
2609 5737 7.230747 TGAAAAATCTCACCAACCAAGATAGA 58.769 34.615 0.00 0.00 0.00 1.98
2610 5738 7.452880 TGAAAAATCTCACCAACCAAGATAG 57.547 36.000 0.00 0.00 0.00 2.08
2611 5739 7.831691 TTGAAAAATCTCACCAACCAAGATA 57.168 32.000 0.00 0.00 0.00 1.98
2612 5740 6.729690 TTGAAAAATCTCACCAACCAAGAT 57.270 33.333 0.00 0.00 0.00 2.40
2613 5741 6.729690 ATTGAAAAATCTCACCAACCAAGA 57.270 33.333 0.00 0.00 0.00 3.02
2614 5742 8.885494 TTAATTGAAAAATCTCACCAACCAAG 57.115 30.769 0.00 0.00 0.00 3.61
2615 5743 9.103861 GTTTAATTGAAAAATCTCACCAACCAA 57.896 29.630 0.00 0.00 0.00 3.67
2616 5744 7.713073 GGTTTAATTGAAAAATCTCACCAACCA 59.287 33.333 0.00 0.00 0.00 3.67
2617 5745 7.931407 AGGTTTAATTGAAAAATCTCACCAACC 59.069 33.333 0.00 0.00 0.00 3.77
2618 5746 8.887036 AGGTTTAATTGAAAAATCTCACCAAC 57.113 30.769 0.00 0.00 0.00 3.77
2627 5755 9.594478 CCCGCTTATAAGGTTTAATTGAAAAAT 57.406 29.630 14.28 0.00 0.00 1.82
2628 5756 8.804204 TCCCGCTTATAAGGTTTAATTGAAAAA 58.196 29.630 14.28 0.00 0.00 1.94
2629 5757 8.350852 TCCCGCTTATAAGGTTTAATTGAAAA 57.649 30.769 14.28 0.00 0.00 2.29
2630 5758 7.941431 TCCCGCTTATAAGGTTTAATTGAAA 57.059 32.000 14.28 0.00 0.00 2.69
2631 5759 7.941431 TTCCCGCTTATAAGGTTTAATTGAA 57.059 32.000 14.28 0.00 0.00 2.69
2632 5760 7.067737 CCTTTCCCGCTTATAAGGTTTAATTGA 59.932 37.037 14.28 0.00 33.93 2.57
2633 5761 7.067737 TCCTTTCCCGCTTATAAGGTTTAATTG 59.932 37.037 14.28 0.00 38.59 2.32
2634 5762 7.120716 TCCTTTCCCGCTTATAAGGTTTAATT 58.879 34.615 14.28 0.00 38.59 1.40
2635 5763 6.665695 TCCTTTCCCGCTTATAAGGTTTAAT 58.334 36.000 14.28 0.00 38.59 1.40
2636 5764 6.064735 TCCTTTCCCGCTTATAAGGTTTAA 57.935 37.500 14.28 0.00 38.59 1.52
2637 5765 5.190330 ACTCCTTTCCCGCTTATAAGGTTTA 59.810 40.000 14.28 0.00 38.59 2.01
2638 5766 4.018688 ACTCCTTTCCCGCTTATAAGGTTT 60.019 41.667 14.28 0.00 38.59 3.27
2639 5767 3.522343 ACTCCTTTCCCGCTTATAAGGTT 59.478 43.478 14.28 0.00 38.59 3.50
2640 5768 3.113043 ACTCCTTTCCCGCTTATAAGGT 58.887 45.455 14.28 0.00 38.59 3.50
2641 5769 3.134081 TCACTCCTTTCCCGCTTATAAGG 59.866 47.826 14.28 4.57 38.78 2.69
2642 5770 4.141914 ACTCACTCCTTTCCCGCTTATAAG 60.142 45.833 8.20 8.20 0.00 1.73
2643 5771 3.773119 ACTCACTCCTTTCCCGCTTATAA 59.227 43.478 0.00 0.00 0.00 0.98
2644 5772 3.371965 ACTCACTCCTTTCCCGCTTATA 58.628 45.455 0.00 0.00 0.00 0.98
2645 5773 2.188817 ACTCACTCCTTTCCCGCTTAT 58.811 47.619 0.00 0.00 0.00 1.73
2646 5774 1.640917 ACTCACTCCTTTCCCGCTTA 58.359 50.000 0.00 0.00 0.00 3.09
2647 5775 1.550976 CTACTCACTCCTTTCCCGCTT 59.449 52.381 0.00 0.00 0.00 4.68
2648 5776 1.187087 CTACTCACTCCTTTCCCGCT 58.813 55.000 0.00 0.00 0.00 5.52
2649 5777 0.896226 ACTACTCACTCCTTTCCCGC 59.104 55.000 0.00 0.00 0.00 6.13
2650 5778 3.354467 ACTACTACTCACTCCTTTCCCG 58.646 50.000 0.00 0.00 0.00 5.14
2651 5779 5.508567 ACTACTACTACTCACTCCTTTCCC 58.491 45.833 0.00 0.00 0.00 3.97
2652 5780 7.828717 ACTTACTACTACTACTCACTCCTTTCC 59.171 40.741 0.00 0.00 0.00 3.13
2653 5781 8.791327 ACTTACTACTACTACTCACTCCTTTC 57.209 38.462 0.00 0.00 0.00 2.62
2654 5782 8.381636 TGACTTACTACTACTACTCACTCCTTT 58.618 37.037 0.00 0.00 0.00 3.11
2655 5783 7.823799 GTGACTTACTACTACTACTCACTCCTT 59.176 40.741 0.00 0.00 0.00 3.36
2656 5784 7.038445 TGTGACTTACTACTACTACTCACTCCT 60.038 40.741 0.00 0.00 0.00 3.69
2657 5785 7.102346 TGTGACTTACTACTACTACTCACTCC 58.898 42.308 0.00 0.00 0.00 3.85
2658 5786 8.605746 CATGTGACTTACTACTACTACTCACTC 58.394 40.741 0.00 0.00 0.00 3.51
2659 5787 8.102047 ACATGTGACTTACTACTACTACTCACT 58.898 37.037 0.00 0.00 0.00 3.41
2660 5788 8.266392 ACATGTGACTTACTACTACTACTCAC 57.734 38.462 0.00 0.00 0.00 3.51
2661 5789 9.376075 GTACATGTGACTTACTACTACTACTCA 57.624 37.037 9.11 0.00 0.00 3.41
2662 5790 8.538856 CGTACATGTGACTTACTACTACTACTC 58.461 40.741 9.11 0.00 0.00 2.59
2663 5791 8.037758 ACGTACATGTGACTTACTACTACTACT 58.962 37.037 9.11 0.00 0.00 2.57
2664 5792 8.190888 ACGTACATGTGACTTACTACTACTAC 57.809 38.462 9.11 0.00 0.00 2.73
2665 5793 9.521503 CTACGTACATGTGACTTACTACTACTA 57.478 37.037 9.11 0.00 0.00 1.82
2666 5794 8.253810 TCTACGTACATGTGACTTACTACTACT 58.746 37.037 9.11 0.00 0.00 2.57
2680 5808 6.586844 GCTTTCTTTTCTCTCTACGTACATGT 59.413 38.462 2.69 2.69 0.00 3.21
2699 5827 7.099120 GGAATTCCACATACAATTTGCTTTCT 58.901 34.615 20.04 0.00 35.64 2.52
2708 5836 6.378280 GGAGAAACTGGAATTCCACATACAAT 59.622 38.462 23.63 6.35 42.01 2.71
2789 6056 9.704098 GCCTAGAAAAATAAGTATTTGAGAACG 57.296 33.333 0.00 0.00 36.14 3.95
2804 6071 9.875691 GAGTCCATTTAAAATGCCTAGAAAAAT 57.124 29.630 0.00 0.00 0.00 1.82
2805 6072 8.865090 TGAGTCCATTTAAAATGCCTAGAAAAA 58.135 29.630 0.00 0.00 0.00 1.94
2806 6073 8.415950 TGAGTCCATTTAAAATGCCTAGAAAA 57.584 30.769 0.00 0.00 0.00 2.29
2807 6074 8.415950 TTGAGTCCATTTAAAATGCCTAGAAA 57.584 30.769 0.00 0.00 0.00 2.52
2808 6075 8.593945 ATTGAGTCCATTTAAAATGCCTAGAA 57.406 30.769 0.00 0.00 0.00 2.10
2809 6076 9.866655 ATATTGAGTCCATTTAAAATGCCTAGA 57.133 29.630 0.00 0.00 0.00 2.43
2812 6079 8.567948 CGTATATTGAGTCCATTTAAAATGCCT 58.432 33.333 0.00 0.00 0.00 4.75
2813 6080 7.807907 CCGTATATTGAGTCCATTTAAAATGCC 59.192 37.037 0.00 0.00 0.00 4.40
2814 6081 8.564574 TCCGTATATTGAGTCCATTTAAAATGC 58.435 33.333 0.00 0.00 0.00 3.56
2817 6084 8.564574 GCATCCGTATATTGAGTCCATTTAAAA 58.435 33.333 0.00 0.00 0.00 1.52
2818 6085 7.717436 TGCATCCGTATATTGAGTCCATTTAAA 59.283 33.333 0.00 0.00 0.00 1.52
2819 6086 7.220740 TGCATCCGTATATTGAGTCCATTTAA 58.779 34.615 0.00 0.00 0.00 1.52
2820 6087 6.764379 TGCATCCGTATATTGAGTCCATTTA 58.236 36.000 0.00 0.00 0.00 1.40
2821 6088 5.620206 TGCATCCGTATATTGAGTCCATTT 58.380 37.500 0.00 0.00 0.00 2.32
2822 6089 5.227569 TGCATCCGTATATTGAGTCCATT 57.772 39.130 0.00 0.00 0.00 3.16
2823 6090 4.890158 TGCATCCGTATATTGAGTCCAT 57.110 40.909 0.00 0.00 0.00 3.41
2824 6091 4.040339 ACATGCATCCGTATATTGAGTCCA 59.960 41.667 0.00 0.00 0.00 4.02
2825 6092 4.569943 ACATGCATCCGTATATTGAGTCC 58.430 43.478 0.00 0.00 0.00 3.85
2826 6093 6.621613 TCTACATGCATCCGTATATTGAGTC 58.378 40.000 0.00 0.00 0.00 3.36
2827 6094 6.590234 TCTACATGCATCCGTATATTGAGT 57.410 37.500 0.00 0.00 0.00 3.41
2872 6139 9.555727 AGTGACTACATACGGCATAAAATAAAT 57.444 29.630 0.00 0.00 0.00 1.40
2873 6140 8.951787 AGTGACTACATACGGCATAAAATAAA 57.048 30.769 0.00 0.00 0.00 1.40
2874 6141 8.951787 AAGTGACTACATACGGCATAAAATAA 57.048 30.769 0.00 0.00 0.00 1.40
2876 6143 9.555727 AATAAGTGACTACATACGGCATAAAAT 57.444 29.630 0.00 0.00 0.00 1.82
2877 6144 8.822855 CAATAAGTGACTACATACGGCATAAAA 58.177 33.333 0.00 0.00 0.00 1.52
2878 6145 8.198778 TCAATAAGTGACTACATACGGCATAAA 58.801 33.333 0.00 0.00 0.00 1.40
2879 6146 7.718525 TCAATAAGTGACTACATACGGCATAA 58.281 34.615 0.00 0.00 0.00 1.90
2880 6147 7.279750 TCAATAAGTGACTACATACGGCATA 57.720 36.000 0.00 0.00 0.00 3.14
2881 6148 6.156748 TCAATAAGTGACTACATACGGCAT 57.843 37.500 0.00 0.00 0.00 4.40
2882 6149 5.585820 TCAATAAGTGACTACATACGGCA 57.414 39.130 0.00 0.00 0.00 5.69
2883 6150 6.897259 TTTCAATAAGTGACTACATACGGC 57.103 37.500 0.00 0.00 35.39 5.68
2884 6151 8.873215 AGATTTCAATAAGTGACTACATACGG 57.127 34.615 0.00 0.00 35.39 4.02
2912 6179 9.333724 TCTCCGTTTCTAAATACTTGTCTTTTT 57.666 29.630 0.00 0.00 0.00 1.94
2913 6180 8.897872 TCTCCGTTTCTAAATACTTGTCTTTT 57.102 30.769 0.00 0.00 0.00 2.27
2914 6181 8.365647 TCTCTCCGTTTCTAAATACTTGTCTTT 58.634 33.333 0.00 0.00 0.00 2.52
2915 6182 7.893658 TCTCTCCGTTTCTAAATACTTGTCTT 58.106 34.615 0.00 0.00 0.00 3.01
2916 6183 7.177041 ACTCTCTCCGTTTCTAAATACTTGTCT 59.823 37.037 0.00 0.00 0.00 3.41
2917 6184 7.314393 ACTCTCTCCGTTTCTAAATACTTGTC 58.686 38.462 0.00 0.00 0.00 3.18
2918 6185 7.229581 ACTCTCTCCGTTTCTAAATACTTGT 57.770 36.000 0.00 0.00 0.00 3.16
2919 6186 8.460428 ACTACTCTCTCCGTTTCTAAATACTTG 58.540 37.037 0.00 0.00 0.00 3.16
2920 6187 8.578448 ACTACTCTCTCCGTTTCTAAATACTT 57.422 34.615 0.00 0.00 0.00 2.24
2921 6188 8.578448 AACTACTCTCTCCGTTTCTAAATACT 57.422 34.615 0.00 0.00 0.00 2.12
2922 6189 9.636879 AAAACTACTCTCTCCGTTTCTAAATAC 57.363 33.333 0.00 0.00 0.00 1.89
3023 6290 7.741554 ACAGAGGGAGTACTCAAAAAGATAT 57.258 36.000 23.91 0.00 39.97 1.63
3024 6291 8.660295 TTACAGAGGGAGTACTCAAAAAGATA 57.340 34.615 23.91 5.65 39.97 1.98
3025 6292 7.554959 TTACAGAGGGAGTACTCAAAAAGAT 57.445 36.000 23.91 6.57 39.97 2.40
3100 6367 9.807649 GTCAAGTACTCCCTTCGTAAATTAATA 57.192 33.333 0.00 0.00 0.00 0.98
3101 6368 8.316214 TGTCAAGTACTCCCTTCGTAAATTAAT 58.684 33.333 0.00 0.00 0.00 1.40
3102 6369 7.669427 TGTCAAGTACTCCCTTCGTAAATTAA 58.331 34.615 0.00 0.00 0.00 1.40
3103 6370 7.230849 TGTCAAGTACTCCCTTCGTAAATTA 57.769 36.000 0.00 0.00 0.00 1.40
3104 6371 6.105397 TGTCAAGTACTCCCTTCGTAAATT 57.895 37.500 0.00 0.00 0.00 1.82
3105 6372 5.721232 CTGTCAAGTACTCCCTTCGTAAAT 58.279 41.667 0.00 0.00 0.00 1.40
3106 6373 4.560108 GCTGTCAAGTACTCCCTTCGTAAA 60.560 45.833 0.00 0.00 0.00 2.01
3107 6374 3.057033 GCTGTCAAGTACTCCCTTCGTAA 60.057 47.826 0.00 0.00 0.00 3.18
3108 6375 2.490903 GCTGTCAAGTACTCCCTTCGTA 59.509 50.000 0.00 0.00 0.00 3.43
3109 6376 1.272769 GCTGTCAAGTACTCCCTTCGT 59.727 52.381 0.00 0.00 0.00 3.85
3110 6377 1.272490 TGCTGTCAAGTACTCCCTTCG 59.728 52.381 0.00 0.00 0.00 3.79
3111 6378 3.330267 CTTGCTGTCAAGTACTCCCTTC 58.670 50.000 0.00 0.00 43.55 3.46
3112 6379 2.039084 CCTTGCTGTCAAGTACTCCCTT 59.961 50.000 0.00 0.00 46.33 3.95
3113 6380 1.625818 CCTTGCTGTCAAGTACTCCCT 59.374 52.381 0.00 0.00 46.33 4.20
3114 6381 1.339151 CCCTTGCTGTCAAGTACTCCC 60.339 57.143 0.00 0.00 46.33 4.30
3115 6382 1.623811 TCCCTTGCTGTCAAGTACTCC 59.376 52.381 0.00 0.00 46.33 3.85
3116 6383 2.300437 ACTCCCTTGCTGTCAAGTACTC 59.700 50.000 0.00 0.00 46.33 2.59
3117 6384 2.330216 ACTCCCTTGCTGTCAAGTACT 58.670 47.619 0.00 0.00 46.33 2.73
3118 6385 2.841442 ACTCCCTTGCTGTCAAGTAC 57.159 50.000 9.74 0.00 46.33 2.73
3119 6386 3.507411 AGTACTCCCTTGCTGTCAAGTA 58.493 45.455 0.00 0.00 46.33 2.24
3120 6387 2.330216 AGTACTCCCTTGCTGTCAAGT 58.670 47.619 0.00 0.00 46.33 3.16
3122 6389 2.224523 CCAAGTACTCCCTTGCTGTCAA 60.225 50.000 0.00 0.00 40.40 3.18
3123 6390 1.347707 CCAAGTACTCCCTTGCTGTCA 59.652 52.381 0.00 0.00 40.40 3.58
3124 6391 1.946283 GCCAAGTACTCCCTTGCTGTC 60.946 57.143 0.00 0.00 40.40 3.51
3125 6392 0.036875 GCCAAGTACTCCCTTGCTGT 59.963 55.000 0.00 0.00 40.40 4.40
3126 6393 0.036732 TGCCAAGTACTCCCTTGCTG 59.963 55.000 0.00 0.00 40.40 4.41
3127 6394 0.326264 CTGCCAAGTACTCCCTTGCT 59.674 55.000 0.00 0.00 40.40 3.91
3128 6395 1.308783 GCTGCCAAGTACTCCCTTGC 61.309 60.000 0.00 0.00 40.40 4.01
3129 6396 0.036732 TGCTGCCAAGTACTCCCTTG 59.963 55.000 0.00 0.00 41.21 3.61
3130 6397 0.995024 ATGCTGCCAAGTACTCCCTT 59.005 50.000 0.00 0.00 0.00 3.95
3131 6398 0.543749 GATGCTGCCAAGTACTCCCT 59.456 55.000 0.00 0.00 0.00 4.20
3132 6399 0.253044 TGATGCTGCCAAGTACTCCC 59.747 55.000 0.00 0.00 0.00 4.30
3133 6400 1.373570 GTGATGCTGCCAAGTACTCC 58.626 55.000 0.00 0.00 0.00 3.85
3134 6401 1.065854 AGGTGATGCTGCCAAGTACTC 60.066 52.381 0.00 0.00 0.00 2.59
3135 6402 0.987294 AGGTGATGCTGCCAAGTACT 59.013 50.000 0.00 0.00 0.00 2.73
3136 6403 1.373570 GAGGTGATGCTGCCAAGTAC 58.626 55.000 0.00 0.00 0.00 2.73
3197 6464 8.433421 AAACGGAGAAAGTATTACATACATGG 57.567 34.615 0.00 0.00 38.21 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.