Multiple sequence alignment - TraesCS7B01G168200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G168200 chr7B 100.000 3431 0 0 1 3431 234915373 234911943 0.000000e+00 6336.0
1 TraesCS7B01G168200 chr7B 87.009 331 39 3 3102 3428 601630538 601630208 1.500000e-98 370.0
2 TraesCS7B01G168200 chr7B 87.261 314 39 1 3115 3428 603597474 603597786 1.170000e-94 357.0
3 TraesCS7B01G168200 chr7B 84.665 313 45 3 3115 3426 663974184 663974494 3.330000e-80 309.0
4 TraesCS7B01G168200 chr7B 97.315 149 4 0 2383 2531 750578950 750579098 1.580000e-63 254.0
5 TraesCS7B01G168200 chr7B 81.132 106 18 1 590 693 741493950 741493845 2.190000e-12 84.2
6 TraesCS7B01G168200 chr7D 93.518 2314 108 18 1 2292 256221496 256219203 0.000000e+00 3404.0
7 TraesCS7B01G168200 chr7D 90.863 591 27 13 2532 3107 256219080 256218502 0.000000e+00 767.0
8 TraesCS7B01G168200 chr7D 98.889 90 1 0 2293 2382 256219153 256219064 9.850000e-36 161.0
9 TraesCS7B01G168200 chr7A 95.263 1710 71 5 590 2292 275973975 275972269 0.000000e+00 2700.0
10 TraesCS7B01G168200 chr7A 88.704 602 29 13 2532 3107 275972146 275971558 0.000000e+00 699.0
11 TraesCS7B01G168200 chr7A 87.312 599 52 6 1 585 275974850 275974262 0.000000e+00 664.0
12 TraesCS7B01G168200 chr7A 74.651 430 70 27 67 473 284774021 284773608 1.650000e-33 154.0
13 TraesCS7B01G168200 chr7A 94.444 90 4 1 2293 2381 275972219 275972130 1.660000e-28 137.0
14 TraesCS7B01G168200 chr4D 88.889 486 40 8 1 476 549851 549370 1.370000e-163 586.0
15 TraesCS7B01G168200 chr4D 94.737 152 7 1 2383 2533 447293663 447293814 5.720000e-58 235.0
16 TraesCS7B01G168200 chr6B 88.981 481 42 9 1 473 44245362 44245839 4.930000e-163 584.0
17 TraesCS7B01G168200 chr6B 88.797 482 40 12 1 473 320542338 320542814 2.300000e-161 579.0
18 TraesCS7B01G168200 chr3B 89.121 478 41 8 4 473 814498278 814498752 4.930000e-163 584.0
19 TraesCS7B01G168200 chr3B 87.421 318 36 4 3115 3431 412443067 412442753 2.520000e-96 363.0
20 TraesCS7B01G168200 chr3B 97.987 149 3 0 2383 2531 11694599 11694451 3.400000e-65 259.0
21 TraesCS7B01G168200 chr3B 95.973 149 6 0 2383 2531 807942516 807942664 3.420000e-60 243.0
22 TraesCS7B01G168200 chr2B 88.797 482 42 10 1 473 51079932 51079454 6.380000e-162 580.0
23 TraesCS7B01G168200 chr2B 88.387 310 30 4 3118 3426 777379641 777379337 5.410000e-98 368.0
24 TraesCS7B01G168200 chr4A 88.773 481 43 8 1 473 714426604 714427081 2.300000e-161 579.0
25 TraesCS7B01G168200 chr4A 81.081 111 15 5 589 697 484356849 484356743 2.190000e-12 84.2
26 TraesCS7B01G168200 chr2A 88.589 482 44 9 1 474 644222753 644222275 2.970000e-160 575.0
27 TraesCS7B01G168200 chr2A 86.957 92 12 0 382 473 61462812 61462721 1.680000e-18 104.0
28 TraesCS7B01G168200 chr4B 85.804 317 45 0 3115 3431 670807065 670806749 1.530000e-88 337.0
29 TraesCS7B01G168200 chr4B 85.669 314 42 3 3118 3430 671620270 671619959 9.180000e-86 327.0
30 TraesCS7B01G168200 chr4B 75.000 428 71 25 67 473 334073250 334073662 7.620000e-37 165.0
31 TraesCS7B01G168200 chr4B 90.000 90 9 0 384 473 524068580 524068491 2.160000e-22 117.0
32 TraesCS7B01G168200 chr5B 86.452 310 37 4 3118 3426 88868925 88868620 5.490000e-88 335.0
33 TraesCS7B01G168200 chr5B 85.174 317 45 2 3115 3430 398159811 398159496 1.190000e-84 324.0
34 TraesCS7B01G168200 chr5B 87.097 93 10 2 382 473 81786346 81786437 1.680000e-18 104.0
35 TraesCS7B01G168200 chr1A 98.000 150 3 0 2383 2532 104919004 104918855 9.440000e-66 261.0
36 TraesCS7B01G168200 chr1D 94.702 151 8 0 2383 2533 367162680 367162530 5.720000e-58 235.0
37 TraesCS7B01G168200 chr1D 75.000 420 72 20 67 466 451984495 451984901 2.740000e-36 163.0
38 TraesCS7B01G168200 chr1D 84.071 113 16 2 589 699 415622954 415623066 1.300000e-19 108.0
39 TraesCS7B01G168200 chrUn 94.667 150 8 0 2383 2532 64153321 64153172 2.060000e-57 233.0
40 TraesCS7B01G168200 chrUn 94.079 152 8 1 2383 2534 15884553 15884403 2.660000e-56 230.0
41 TraesCS7B01G168200 chr6A 93.038 158 9 2 2375 2530 448358171 448358328 2.660000e-56 230.0
42 TraesCS7B01G168200 chr2D 85.714 112 13 2 589 698 634317974 634317864 7.780000e-22 115.0
43 TraesCS7B01G168200 chr6D 85.185 108 14 1 589 694 27536403 27536296 3.620000e-20 110.0
44 TraesCS7B01G168200 chr5D 88.043 92 11 0 382 473 55899738 55899647 3.620000e-20 110.0
45 TraesCS7B01G168200 chr5D 87.097 93 12 0 382 474 98232262 98232170 4.680000e-19 106.0
46 TraesCS7B01G168200 chr5A 88.043 92 11 0 382 473 44873129 44873038 3.620000e-20 110.0
47 TraesCS7B01G168200 chr3D 89.706 68 3 4 632 698 66251610 66251674 2.190000e-12 84.2
48 TraesCS7B01G168200 chr3D 85.714 70 8 2 632 700 66141099 66141031 4.750000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G168200 chr7B 234911943 234915373 3430 True 6336 6336 100.000000 1 3431 1 chr7B.!!$R1 3430
1 TraesCS7B01G168200 chr7D 256218502 256221496 2994 True 1444 3404 94.423333 1 3107 3 chr7D.!!$R1 3106
2 TraesCS7B01G168200 chr7A 275971558 275974850 3292 True 1050 2700 91.430750 1 3107 4 chr7A.!!$R2 3106

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
196 197 1.003355 ACACTCCCTGTTGATGCCG 60.003 57.895 0.00 0.0 0.00 5.69 F
1016 1324 0.253044 GCCATGGCTACAGTCCTCAA 59.747 55.000 29.98 0.0 38.26 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1026 1334 2.119801 CTGCAAGCAGGTACAGGATT 57.880 50.0 14.1 0.0 40.17 3.01 R
2516 2881 0.174845 TTATTGAGGACAGGGCGTCG 59.825 55.0 0.0 0.0 46.42 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.607499 CTCTCTATGTGGCCATCCTCT 58.393 52.381 9.72 0.00 32.29 3.69
34 35 2.299582 CTCTCTATGTGGCCATCCTCTG 59.700 54.545 9.72 0.00 32.29 3.35
83 84 2.758979 ACATTCTATCTTCCGACGGTGT 59.241 45.455 14.79 4.41 0.00 4.16
181 182 2.031191 CGTAGTTGTTTGGTGACCACAC 59.969 50.000 13.76 13.76 45.27 3.82
196 197 1.003355 ACACTCCCTGTTGATGCCG 60.003 57.895 0.00 0.00 0.00 5.69
217 218 3.169908 GGTCATCCCCTTCTCCTCTATC 58.830 54.545 0.00 0.00 0.00 2.08
281 282 1.941209 GCCTCGATGTCTTCAGTTGCA 60.941 52.381 0.00 0.00 0.00 4.08
289 290 3.216800 TGTCTTCAGTTGCATGCTTCTT 58.783 40.909 20.33 0.00 0.00 2.52
366 367 6.365247 GCCTATGTATCTTACCGTGTTGTATG 59.635 42.308 0.00 0.00 0.00 2.39
394 405 1.568504 TCGGTCTGTATTCTTGGCCT 58.431 50.000 3.32 0.00 0.00 5.19
413 424 3.928375 GCCTGTTGATGGCTTTGTTAATG 59.072 43.478 0.00 0.00 46.38 1.90
446 457 3.136750 CTCGAGCCCCATCTCTGG 58.863 66.667 0.00 0.00 42.73 3.86
458 469 1.139256 CATCTCTGGCTCAGCTGATGT 59.861 52.381 18.63 0.00 37.38 3.06
474 485 8.509690 TCAGCTGATGTCTTTTCTCTAAAAATG 58.490 33.333 13.74 0.00 34.26 2.32
490 501 9.410556 CTCTAAAAATGTTCTTTTGTGTATGGG 57.589 33.333 0.00 0.00 31.15 4.00
491 502 8.364142 TCTAAAAATGTTCTTTTGTGTATGGGG 58.636 33.333 0.00 0.00 31.15 4.96
492 503 4.535526 AATGTTCTTTTGTGTATGGGGC 57.464 40.909 0.00 0.00 0.00 5.80
493 504 3.237268 TGTTCTTTTGTGTATGGGGCT 57.763 42.857 0.00 0.00 0.00 5.19
494 505 4.374689 TGTTCTTTTGTGTATGGGGCTA 57.625 40.909 0.00 0.00 0.00 3.93
598 902 1.684035 CCCAATGGGCAATGGCAAA 59.316 52.632 4.89 0.00 43.71 3.68
614 918 2.223572 GGCAAATGCGTCCTATTTCCAG 60.224 50.000 0.00 0.00 43.26 3.86
618 922 5.730568 GCAAATGCGTCCTATTTCCAGTTAG 60.731 44.000 0.00 0.00 0.00 2.34
629 935 2.787473 TCCAGTTAGGCCATGAGTTG 57.213 50.000 5.01 0.00 37.29 3.16
706 1012 6.887626 AACCTCGTTTATTTTTCTTGCCTA 57.112 33.333 0.00 0.00 0.00 3.93
713 1019 9.535878 TCGTTTATTTTTCTTGCCTAAACATTT 57.464 25.926 0.00 0.00 33.82 2.32
747 1054 4.811969 TGAATACTCGGTGCCTTCTTTA 57.188 40.909 0.00 0.00 0.00 1.85
815 1122 5.013183 AGAGGAGTTACAAGTAGCACCAAAT 59.987 40.000 11.67 0.00 31.48 2.32
835 1142 9.463443 ACCAAATAATAATAAAAGCGCTCAATC 57.537 29.630 12.06 0.00 0.00 2.67
893 1201 9.906660 TTTATATTTGCACGAAGTCTTCAATTT 57.093 25.926 12.99 3.01 41.61 1.82
894 1202 9.906660 TTATATTTGCACGAAGTCTTCAATTTT 57.093 25.926 12.99 0.22 41.61 1.82
900 1208 5.051708 GCACGAAGTCTTCAATTTTTGGAAC 60.052 40.000 12.99 0.00 41.61 3.62
902 1210 6.197096 CACGAAGTCTTCAATTTTTGGAACAG 59.803 38.462 12.99 0.00 41.61 3.16
927 1235 2.534349 CGCTGATGTATGTAACGGTGTC 59.466 50.000 0.00 0.00 0.00 3.67
937 1245 8.185506 TGTATGTAACGGTGTCCATATAAGAT 57.814 34.615 0.00 0.00 0.00 2.40
938 1246 9.299465 TGTATGTAACGGTGTCCATATAAGATA 57.701 33.333 0.00 0.00 0.00 1.98
939 1247 9.784680 GTATGTAACGGTGTCCATATAAGATAG 57.215 37.037 0.00 0.00 0.00 2.08
951 1259 8.336806 GTCCATATAAGATAGTACGAAGATCCG 58.663 40.741 0.00 0.00 0.00 4.18
953 1261 8.675504 CCATATAAGATAGTACGAAGATCCGTT 58.324 37.037 2.33 0.00 43.20 4.44
972 1280 2.273370 TCTGACATTACGCGGTTCTC 57.727 50.000 12.47 0.00 0.00 2.87
988 1296 4.061596 GGTTCTCAAGTCTGAACTTCCAG 58.938 47.826 0.00 0.00 43.99 3.86
990 1298 5.119694 GTTCTCAAGTCTGAACTTCCAGTT 58.880 41.667 0.00 0.00 43.99 3.16
1016 1324 0.253044 GCCATGGCTACAGTCCTCAA 59.747 55.000 29.98 0.00 38.26 3.02
1026 1334 1.151413 ACAGTCCTCAAGGTCCCCTTA 59.849 52.381 0.00 0.00 42.67 2.69
1041 1349 2.509964 CCCCTTAATCCTGTACCTGCTT 59.490 50.000 0.00 0.00 0.00 3.91
1044 1352 3.609853 CTTAATCCTGTACCTGCTTGCA 58.390 45.455 0.00 0.00 0.00 4.08
1116 1427 5.598769 GGCCTTTATGACGTTACAGAGTAT 58.401 41.667 0.00 0.00 0.00 2.12
1482 1798 2.596851 GCCCTGAGCAACCTCCTCA 61.597 63.158 0.00 0.00 42.97 3.86
1537 1853 0.741221 GCTCGGACTAACAAGGCCAG 60.741 60.000 5.01 0.00 0.00 4.85
1583 1899 5.848036 CGCCAATACTGAATCGATCAAATTC 59.152 40.000 0.00 9.76 37.67 2.17
1614 1930 2.157085 CCTTTTTACTGAACGAGACGGC 59.843 50.000 0.00 0.00 0.00 5.68
1651 1967 0.390866 CATTGCGCAGACTCTGGAGT 60.391 55.000 11.31 2.62 45.84 3.85
1828 2144 4.794439 CGAGCCACGTCCGCATCA 62.794 66.667 6.89 0.00 37.22 3.07
1893 2209 4.131088 GGCTCCTCGGACGTGGTC 62.131 72.222 11.91 6.14 0.00 4.02
1911 2227 2.261671 GTCACCGGCATCGTCTGT 59.738 61.111 0.00 0.00 33.95 3.41
2382 2747 3.689161 CGCTGAATAACCAACCATTCTCA 59.311 43.478 0.00 0.00 33.26 3.27
2383 2748 4.155826 CGCTGAATAACCAACCATTCTCAA 59.844 41.667 0.00 0.00 33.26 3.02
2385 2750 6.454795 GCTGAATAACCAACCATTCTCAAAA 58.545 36.000 0.00 0.00 33.26 2.44
2386 2751 6.928492 GCTGAATAACCAACCATTCTCAAAAA 59.072 34.615 0.00 0.00 33.26 1.94
2387 2752 7.603784 GCTGAATAACCAACCATTCTCAAAAAT 59.396 33.333 0.00 0.00 33.26 1.82
2388 2753 8.830201 TGAATAACCAACCATTCTCAAAAATG 57.170 30.769 0.00 0.00 36.57 2.32
2389 2754 8.646004 TGAATAACCAACCATTCTCAAAAATGA 58.354 29.630 0.00 0.00 38.64 2.57
2390 2755 9.143631 GAATAACCAACCATTCTCAAAAATGAG 57.856 33.333 0.00 0.00 38.64 2.90
2391 2756 6.729690 AACCAACCATTCTCAAAAATGAGA 57.270 33.333 4.49 4.49 42.56 3.27
2392 2757 6.089249 ACCAACCATTCTCAAAAATGAGAC 57.911 37.500 7.98 0.00 43.78 3.36
2395 2760 6.462768 CCAACCATTCTCAAAAATGAGACCAA 60.463 38.462 7.98 0.00 43.78 3.67
2396 2761 6.089249 ACCATTCTCAAAAATGAGACCAAC 57.911 37.500 7.98 0.00 43.78 3.77
2397 2762 5.011023 ACCATTCTCAAAAATGAGACCAACC 59.989 40.000 7.98 0.00 43.78 3.77
2398 2763 5.473039 CATTCTCAAAAATGAGACCAACCC 58.527 41.667 7.98 0.00 43.78 4.11
2399 2764 4.177537 TCTCAAAAATGAGACCAACCCA 57.822 40.909 4.49 0.00 39.74 4.51
2400 2765 4.541705 TCTCAAAAATGAGACCAACCCAA 58.458 39.130 4.49 0.00 39.74 4.12
2401 2766 4.584325 TCTCAAAAATGAGACCAACCCAAG 59.416 41.667 4.49 0.00 39.74 3.61
2402 2767 3.640967 TCAAAAATGAGACCAACCCAAGG 59.359 43.478 0.00 0.00 0.00 3.61
2403 2768 2.309136 AAATGAGACCAACCCAAGGG 57.691 50.000 2.91 2.91 42.03 3.95
2404 2769 0.251787 AATGAGACCAACCCAAGGGC 60.252 55.000 4.70 0.00 39.32 5.19
2406 2771 4.681624 AGACCAACCCAAGGGCTA 57.318 55.556 4.70 0.00 44.68 3.93
2407 2772 2.877150 AGACCAACCCAAGGGCTAA 58.123 52.632 4.70 0.00 44.68 3.09
2408 2773 0.404426 AGACCAACCCAAGGGCTAAC 59.596 55.000 4.70 0.00 44.68 2.34
2409 2774 0.611062 GACCAACCCAAGGGCTAACC 60.611 60.000 4.70 0.00 39.32 2.85
2420 2785 3.929660 GGCTAACCCTCGTTGACTT 57.070 52.632 0.00 0.00 33.17 3.01
2421 2786 2.180432 GGCTAACCCTCGTTGACTTT 57.820 50.000 0.00 0.00 33.17 2.66
2422 2787 2.501261 GGCTAACCCTCGTTGACTTTT 58.499 47.619 0.00 0.00 33.17 2.27
2423 2788 2.483106 GGCTAACCCTCGTTGACTTTTC 59.517 50.000 0.00 0.00 33.17 2.29
2424 2789 3.400255 GCTAACCCTCGTTGACTTTTCT 58.600 45.455 0.00 0.00 33.17 2.52
2425 2790 3.813724 GCTAACCCTCGTTGACTTTTCTT 59.186 43.478 0.00 0.00 33.17 2.52
2426 2791 4.275196 GCTAACCCTCGTTGACTTTTCTTT 59.725 41.667 0.00 0.00 33.17 2.52
2427 2792 5.467735 GCTAACCCTCGTTGACTTTTCTTTA 59.532 40.000 0.00 0.00 33.17 1.85
2428 2793 6.148976 GCTAACCCTCGTTGACTTTTCTTTAT 59.851 38.462 0.00 0.00 33.17 1.40
2429 2794 7.332678 GCTAACCCTCGTTGACTTTTCTTTATA 59.667 37.037 0.00 0.00 33.17 0.98
2430 2795 7.668525 AACCCTCGTTGACTTTTCTTTATAG 57.331 36.000 0.00 0.00 0.00 1.31
2431 2796 7.001099 ACCCTCGTTGACTTTTCTTTATAGA 57.999 36.000 0.00 0.00 0.00 1.98
2432 2797 7.447594 ACCCTCGTTGACTTTTCTTTATAGAA 58.552 34.615 0.00 0.00 38.61 2.10
2433 2798 7.603024 ACCCTCGTTGACTTTTCTTTATAGAAG 59.397 37.037 0.00 0.00 41.25 2.85
2434 2799 7.817962 CCCTCGTTGACTTTTCTTTATAGAAGA 59.182 37.037 0.00 0.00 41.25 2.87
2435 2800 9.204570 CCTCGTTGACTTTTCTTTATAGAAGAA 57.795 33.333 0.00 0.00 41.25 2.52
2441 2806 9.204570 TGACTTTTCTTTATAGAAGAAACTCCG 57.795 33.333 12.10 5.83 43.52 4.63
2442 2807 9.205719 GACTTTTCTTTATAGAAGAAACTCCGT 57.794 33.333 12.10 8.18 43.52 4.69
2443 2808 8.989980 ACTTTTCTTTATAGAAGAAACTCCGTG 58.010 33.333 12.10 4.03 43.52 4.94
2444 2809 9.204570 CTTTTCTTTATAGAAGAAACTCCGTGA 57.795 33.333 12.10 0.00 43.52 4.35
2445 2810 8.758633 TTTCTTTATAGAAGAAACTCCGTGAG 57.241 34.615 9.24 0.03 41.25 3.51
2446 2811 6.331061 TCTTTATAGAAGAAACTCCGTGAGC 58.669 40.000 1.36 0.00 32.04 4.26
2447 2812 5.654603 TTATAGAAGAAACTCCGTGAGCA 57.345 39.130 1.36 0.00 32.04 4.26
2448 2813 2.156343 AGAAGAAACTCCGTGAGCAC 57.844 50.000 1.36 0.00 32.04 4.40
2449 2814 1.149148 GAAGAAACTCCGTGAGCACC 58.851 55.000 1.36 0.00 32.04 5.01
2450 2815 0.468226 AAGAAACTCCGTGAGCACCA 59.532 50.000 1.36 0.00 32.04 4.17
2451 2816 0.249911 AGAAACTCCGTGAGCACCAC 60.250 55.000 1.36 0.00 42.30 4.16
2458 2823 3.490759 GTGAGCACCACGCATCCG 61.491 66.667 0.00 0.00 46.13 4.18
2474 2839 4.052229 CGTGCCGGGACTCGAACT 62.052 66.667 24.50 0.00 42.43 3.01
2475 2840 2.342648 GTGCCGGGACTCGAACTT 59.657 61.111 20.19 0.00 42.43 2.66
2476 2841 2.027625 GTGCCGGGACTCGAACTTG 61.028 63.158 20.19 0.00 42.43 3.16
2477 2842 2.434359 GCCGGGACTCGAACTTGG 60.434 66.667 2.18 0.00 42.43 3.61
2478 2843 2.264794 CCGGGACTCGAACTTGGG 59.735 66.667 0.00 0.00 42.43 4.12
2479 2844 2.580601 CCGGGACTCGAACTTGGGT 61.581 63.158 0.00 0.00 42.43 4.51
2480 2845 1.374252 CGGGACTCGAACTTGGGTG 60.374 63.158 0.00 0.00 42.43 4.61
2481 2846 1.003718 GGGACTCGAACTTGGGTGG 60.004 63.158 0.00 0.00 0.00 4.61
2482 2847 1.003718 GGACTCGAACTTGGGTGGG 60.004 63.158 0.00 0.00 0.00 4.61
2483 2848 1.671379 GACTCGAACTTGGGTGGGC 60.671 63.158 0.00 0.00 0.00 5.36
2484 2849 2.113243 GACTCGAACTTGGGTGGGCT 62.113 60.000 0.00 0.00 0.00 5.19
2485 2850 1.672356 CTCGAACTTGGGTGGGCTG 60.672 63.158 0.00 0.00 0.00 4.85
2486 2851 2.672996 CGAACTTGGGTGGGCTGG 60.673 66.667 0.00 0.00 0.00 4.85
2487 2852 2.991540 GAACTTGGGTGGGCTGGC 60.992 66.667 0.00 0.00 0.00 4.85
2488 2853 3.808218 GAACTTGGGTGGGCTGGCA 62.808 63.158 2.88 0.00 0.00 4.92
2489 2854 3.815407 AACTTGGGTGGGCTGGCAG 62.815 63.158 10.94 10.94 0.00 4.85
2495 2860 4.982701 GTGGGCTGGCAGCAACCT 62.983 66.667 37.49 0.00 44.75 3.50
2496 2861 4.666253 TGGGCTGGCAGCAACCTC 62.666 66.667 37.49 21.25 44.75 3.85
2497 2862 4.666253 GGGCTGGCAGCAACCTCA 62.666 66.667 37.49 0.00 44.75 3.86
2498 2863 3.060615 GGCTGGCAGCAACCTCAG 61.061 66.667 37.49 0.50 44.75 3.35
2499 2864 3.745803 GCTGGCAGCAACCTCAGC 61.746 66.667 33.33 4.00 44.34 4.26
2500 2865 2.033757 CTGGCAGCAACCTCAGCT 59.966 61.111 0.00 0.00 44.62 4.24
2505 2870 3.573229 AGCAACCTCAGCTGCCCA 61.573 61.111 9.47 0.00 41.61 5.36
2506 2871 3.060615 GCAACCTCAGCTGCCCAG 61.061 66.667 9.47 0.70 32.18 4.45
2516 2881 2.674380 CTGCCCAGCCAACAGGTC 60.674 66.667 0.00 0.00 0.00 3.85
2517 2882 4.641645 TGCCCAGCCAACAGGTCG 62.642 66.667 0.00 0.00 0.00 4.79
2518 2883 4.329545 GCCCAGCCAACAGGTCGA 62.330 66.667 0.00 0.00 0.00 4.20
2519 2884 2.358737 CCCAGCCAACAGGTCGAC 60.359 66.667 7.13 7.13 0.00 4.20
2520 2885 2.738521 CCAGCCAACAGGTCGACG 60.739 66.667 9.92 0.00 0.00 5.12
2521 2886 3.414700 CAGCCAACAGGTCGACGC 61.415 66.667 9.92 6.10 0.00 5.19
2522 2887 4.681978 AGCCAACAGGTCGACGCC 62.682 66.667 9.92 0.00 0.00 5.68
2524 2889 4.003788 CCAACAGGTCGACGCCCT 62.004 66.667 9.92 0.00 0.00 5.19
2528 2893 4.436998 CAGGTCGACGCCCTGTCC 62.437 72.222 16.65 0.00 45.23 4.02
2529 2894 4.680537 AGGTCGACGCCCTGTCCT 62.681 66.667 9.92 0.00 45.23 3.85
2530 2895 4.131088 GGTCGACGCCCTGTCCTC 62.131 72.222 9.92 0.00 45.23 3.71
2531 2896 3.371063 GTCGACGCCCTGTCCTCA 61.371 66.667 0.00 0.00 45.23 3.86
2532 2897 2.599281 TCGACGCCCTGTCCTCAA 60.599 61.111 0.00 0.00 45.23 3.02
2533 2898 1.982395 TCGACGCCCTGTCCTCAAT 60.982 57.895 0.00 0.00 45.23 2.57
2534 2899 0.681887 TCGACGCCCTGTCCTCAATA 60.682 55.000 0.00 0.00 45.23 1.90
2535 2900 0.174845 CGACGCCCTGTCCTCAATAA 59.825 55.000 0.00 0.00 45.23 1.40
2536 2901 1.653151 GACGCCCTGTCCTCAATAAC 58.347 55.000 0.00 0.00 42.04 1.89
2537 2902 0.252197 ACGCCCTGTCCTCAATAACC 59.748 55.000 0.00 0.00 0.00 2.85
2538 2903 0.251916 CGCCCTGTCCTCAATAACCA 59.748 55.000 0.00 0.00 0.00 3.67
2539 2904 1.339631 CGCCCTGTCCTCAATAACCAA 60.340 52.381 0.00 0.00 0.00 3.67
2540 2905 2.092323 GCCCTGTCCTCAATAACCAAC 58.908 52.381 0.00 0.00 0.00 3.77
2541 2906 2.723273 CCCTGTCCTCAATAACCAACC 58.277 52.381 0.00 0.00 0.00 3.77
2542 2907 2.041081 CCCTGTCCTCAATAACCAACCA 59.959 50.000 0.00 0.00 0.00 3.67
2543 2908 3.309121 CCCTGTCCTCAATAACCAACCAT 60.309 47.826 0.00 0.00 0.00 3.55
2544 2909 4.344104 CCTGTCCTCAATAACCAACCATT 58.656 43.478 0.00 0.00 0.00 3.16
2545 2910 4.399303 CCTGTCCTCAATAACCAACCATTC 59.601 45.833 0.00 0.00 0.00 2.67
2546 2911 5.255397 TGTCCTCAATAACCAACCATTCT 57.745 39.130 0.00 0.00 0.00 2.40
2547 2912 5.253330 TGTCCTCAATAACCAACCATTCTC 58.747 41.667 0.00 0.00 0.00 2.87
2548 2913 5.014123 TGTCCTCAATAACCAACCATTCTCT 59.986 40.000 0.00 0.00 0.00 3.10
2549 2914 6.214615 TGTCCTCAATAACCAACCATTCTCTA 59.785 38.462 0.00 0.00 0.00 2.43
2550 2915 6.539103 GTCCTCAATAACCAACCATTCTCTAC 59.461 42.308 0.00 0.00 0.00 2.59
2551 2916 5.823045 CCTCAATAACCAACCATTCTCTACC 59.177 44.000 0.00 0.00 0.00 3.18
2552 2917 5.424757 TCAATAACCAACCATTCTCTACCG 58.575 41.667 0.00 0.00 0.00 4.02
2553 2918 5.188163 TCAATAACCAACCATTCTCTACCGA 59.812 40.000 0.00 0.00 0.00 4.69
2554 2919 3.329929 AACCAACCATTCTCTACCGAC 57.670 47.619 0.00 0.00 0.00 4.79
2555 2920 2.253610 ACCAACCATTCTCTACCGACA 58.746 47.619 0.00 0.00 0.00 4.35
2556 2921 2.635915 ACCAACCATTCTCTACCGACAA 59.364 45.455 0.00 0.00 0.00 3.18
2557 2922 3.262420 CCAACCATTCTCTACCGACAAG 58.738 50.000 0.00 0.00 0.00 3.16
2662 3030 2.403252 CCTATCGGGTTTGCTTGAGT 57.597 50.000 0.00 0.00 0.00 3.41
2690 3058 7.969314 TGCTTGATTTTGGTTTAAAGTTTGAC 58.031 30.769 0.00 0.00 0.00 3.18
2718 3101 7.206687 TGAATTTTTGCAGGTTAATTTCGAGT 58.793 30.769 0.00 0.00 0.00 4.18
2744 3127 9.920133 TTGAAATTTTGCATACAAGCAGTATAA 57.080 25.926 0.00 0.00 46.54 0.98
2847 3231 1.790481 GCACGACAAATAAGCTTCGGC 60.790 52.381 0.00 1.65 42.17 5.54
3107 3494 3.406764 GAGGACACAAGCTCACTTTCAT 58.593 45.455 0.00 0.00 32.29 2.57
3108 3495 3.406764 AGGACACAAGCTCACTTTCATC 58.593 45.455 0.00 0.00 32.29 2.92
3109 3496 3.141398 GGACACAAGCTCACTTTCATCA 58.859 45.455 0.00 0.00 32.29 3.07
3110 3497 3.565482 GGACACAAGCTCACTTTCATCAA 59.435 43.478 0.00 0.00 32.29 2.57
3111 3498 4.217118 GGACACAAGCTCACTTTCATCAAT 59.783 41.667 0.00 0.00 32.29 2.57
3112 3499 5.412594 GGACACAAGCTCACTTTCATCAATA 59.587 40.000 0.00 0.00 32.29 1.90
3113 3500 6.402983 GGACACAAGCTCACTTTCATCAATAG 60.403 42.308 0.00 0.00 32.29 1.73
3114 3501 5.106396 ACACAAGCTCACTTTCATCAATAGC 60.106 40.000 0.00 0.00 32.29 2.97
3115 3502 5.123502 CACAAGCTCACTTTCATCAATAGCT 59.876 40.000 0.00 0.00 40.38 3.32
3116 3503 6.314648 CACAAGCTCACTTTCATCAATAGCTA 59.685 38.462 0.00 0.00 37.84 3.32
3117 3504 6.881065 ACAAGCTCACTTTCATCAATAGCTAA 59.119 34.615 0.00 0.00 37.84 3.09
3118 3505 7.065563 ACAAGCTCACTTTCATCAATAGCTAAG 59.934 37.037 0.00 0.00 37.84 2.18
3119 3506 6.882656 AGCTCACTTTCATCAATAGCTAAGA 58.117 36.000 0.00 0.00 37.08 2.10
3120 3507 6.985645 AGCTCACTTTCATCAATAGCTAAGAG 59.014 38.462 0.00 0.00 37.08 2.85
3121 3508 6.292811 GCTCACTTTCATCAATAGCTAAGAGC 60.293 42.308 0.00 0.00 42.84 4.09
3122 3509 6.643388 TCACTTTCATCAATAGCTAAGAGCA 58.357 36.000 0.00 0.00 45.56 4.26
3123 3510 7.278135 TCACTTTCATCAATAGCTAAGAGCAT 58.722 34.615 0.00 0.00 45.56 3.79
3124 3511 7.440556 TCACTTTCATCAATAGCTAAGAGCATC 59.559 37.037 0.00 0.00 45.56 3.91
3137 3524 2.479566 GAGCATCTTCAACAGGTGGA 57.520 50.000 0.00 0.00 33.60 4.02
3138 3525 2.079925 GAGCATCTTCAACAGGTGGAC 58.920 52.381 0.00 0.00 33.60 4.02
3139 3526 1.421268 AGCATCTTCAACAGGTGGACA 59.579 47.619 0.00 0.00 33.60 4.02
3140 3527 2.158623 AGCATCTTCAACAGGTGGACAA 60.159 45.455 0.00 0.00 33.60 3.18
3141 3528 2.622942 GCATCTTCAACAGGTGGACAAA 59.377 45.455 0.00 0.00 33.60 2.83
3142 3529 3.068024 GCATCTTCAACAGGTGGACAAAA 59.932 43.478 0.00 0.00 33.60 2.44
3143 3530 4.441356 GCATCTTCAACAGGTGGACAAAAA 60.441 41.667 0.00 0.00 33.60 1.94
3144 3531 5.739935 GCATCTTCAACAGGTGGACAAAAAT 60.740 40.000 0.00 0.00 33.60 1.82
3145 3532 5.930837 TCTTCAACAGGTGGACAAAAATT 57.069 34.783 0.00 0.00 0.00 1.82
3146 3533 6.293004 TCTTCAACAGGTGGACAAAAATTT 57.707 33.333 0.00 0.00 0.00 1.82
3147 3534 6.337356 TCTTCAACAGGTGGACAAAAATTTC 58.663 36.000 0.00 0.00 0.00 2.17
3148 3535 5.667539 TCAACAGGTGGACAAAAATTTCA 57.332 34.783 0.00 0.00 0.00 2.69
3149 3536 5.415221 TCAACAGGTGGACAAAAATTTCAC 58.585 37.500 0.00 0.00 0.00 3.18
3150 3537 4.040445 ACAGGTGGACAAAAATTTCACG 57.960 40.909 0.00 0.00 0.00 4.35
3151 3538 3.445805 ACAGGTGGACAAAAATTTCACGT 59.554 39.130 0.00 0.00 0.00 4.49
3152 3539 4.041723 CAGGTGGACAAAAATTTCACGTC 58.958 43.478 0.00 0.00 0.00 4.34
3153 3540 3.067601 AGGTGGACAAAAATTTCACGTCC 59.932 43.478 19.42 19.42 45.24 4.79
3154 3541 3.067601 GGTGGACAAAAATTTCACGTCCT 59.932 43.478 23.48 0.00 45.25 3.85
3155 3542 4.276431 GGTGGACAAAAATTTCACGTCCTA 59.724 41.667 23.48 13.57 45.25 2.94
3156 3543 5.221087 GGTGGACAAAAATTTCACGTCCTAA 60.221 40.000 23.48 10.31 45.25 2.69
3157 3544 6.267070 GTGGACAAAAATTTCACGTCCTAAA 58.733 36.000 23.48 9.82 45.25 1.85
3158 3545 6.752815 GTGGACAAAAATTTCACGTCCTAAAA 59.247 34.615 23.48 9.57 45.25 1.52
3159 3546 7.436970 GTGGACAAAAATTTCACGTCCTAAAAT 59.563 33.333 23.48 0.00 45.25 1.82
3160 3547 8.630917 TGGACAAAAATTTCACGTCCTAAAATA 58.369 29.630 23.48 8.83 45.25 1.40
3161 3548 9.124807 GGACAAAAATTTCACGTCCTAAAATAG 57.875 33.333 19.14 0.00 42.37 1.73
3162 3549 9.673454 GACAAAAATTTCACGTCCTAAAATAGT 57.327 29.630 0.00 0.00 0.00 2.12
3168 3555 9.836076 AATTTCACGTCCTAAAATAGTTTTAGC 57.164 29.630 13.91 4.21 46.75 3.09
3169 3556 6.636666 TCACGTCCTAAAATAGTTTTAGCG 57.363 37.500 13.91 14.36 46.75 4.26
3170 3557 5.062558 TCACGTCCTAAAATAGTTTTAGCGC 59.937 40.000 13.91 0.00 46.75 5.92
3171 3558 4.032104 ACGTCCTAAAATAGTTTTAGCGCG 59.968 41.667 20.98 20.98 46.75 6.86
3172 3559 4.032104 CGTCCTAAAATAGTTTTAGCGCGT 59.968 41.667 8.43 0.00 46.75 6.01
3173 3560 5.487581 GTCCTAAAATAGTTTTAGCGCGTC 58.512 41.667 8.43 0.00 46.75 5.19
3174 3561 5.062558 GTCCTAAAATAGTTTTAGCGCGTCA 59.937 40.000 8.43 0.00 46.75 4.35
3175 3562 5.813672 TCCTAAAATAGTTTTAGCGCGTCAT 59.186 36.000 8.43 0.00 46.75 3.06
3176 3563 6.314400 TCCTAAAATAGTTTTAGCGCGTCATT 59.686 34.615 8.43 0.00 46.75 2.57
3177 3564 6.410914 CCTAAAATAGTTTTAGCGCGTCATTG 59.589 38.462 8.43 0.00 46.75 2.82
3178 3565 4.939509 AATAGTTTTAGCGCGTCATTGT 57.060 36.364 8.43 0.00 0.00 2.71
3179 3566 6.411630 AAATAGTTTTAGCGCGTCATTGTA 57.588 33.333 8.43 0.00 0.00 2.41
3180 3567 3.991605 AGTTTTAGCGCGTCATTGTAG 57.008 42.857 8.43 0.00 0.00 2.74
3181 3568 2.093783 AGTTTTAGCGCGTCATTGTAGC 59.906 45.455 8.43 0.00 0.00 3.58
3182 3569 1.715993 TTTAGCGCGTCATTGTAGCA 58.284 45.000 8.43 0.00 0.00 3.49
3183 3570 1.934589 TTAGCGCGTCATTGTAGCAT 58.065 45.000 8.43 0.00 0.00 3.79
3184 3571 1.934589 TAGCGCGTCATTGTAGCATT 58.065 45.000 8.43 0.00 0.00 3.56
3185 3572 1.086696 AGCGCGTCATTGTAGCATTT 58.913 45.000 8.43 0.00 0.00 2.32
3186 3573 1.468520 AGCGCGTCATTGTAGCATTTT 59.531 42.857 8.43 0.00 0.00 1.82
3187 3574 2.095263 AGCGCGTCATTGTAGCATTTTT 60.095 40.909 8.43 0.00 0.00 1.94
3188 3575 3.126171 AGCGCGTCATTGTAGCATTTTTA 59.874 39.130 8.43 0.00 0.00 1.52
3189 3576 3.478516 GCGCGTCATTGTAGCATTTTTAG 59.521 43.478 8.43 0.00 0.00 1.85
3190 3577 4.647964 CGCGTCATTGTAGCATTTTTAGT 58.352 39.130 0.00 0.00 0.00 2.24
3191 3578 4.491942 CGCGTCATTGTAGCATTTTTAGTG 59.508 41.667 0.00 0.00 0.00 2.74
3192 3579 4.262976 GCGTCATTGTAGCATTTTTAGTGC 59.737 41.667 0.00 0.00 42.81 4.40
3193 3580 4.491942 CGTCATTGTAGCATTTTTAGTGCG 59.508 41.667 0.00 0.00 46.86 5.34
3194 3581 4.262976 GTCATTGTAGCATTTTTAGTGCGC 59.737 41.667 0.00 0.00 46.86 6.09
3195 3582 2.911819 TGTAGCATTTTTAGTGCGCC 57.088 45.000 4.18 0.00 46.86 6.53
3196 3583 1.129624 TGTAGCATTTTTAGTGCGCCG 59.870 47.619 4.18 0.00 46.86 6.46
3197 3584 0.730265 TAGCATTTTTAGTGCGCCGG 59.270 50.000 4.18 0.00 46.86 6.13
3198 3585 0.958382 AGCATTTTTAGTGCGCCGGA 60.958 50.000 5.05 0.00 46.86 5.14
3199 3586 0.796870 GCATTTTTAGTGCGCCGGAC 60.797 55.000 5.05 0.00 32.29 4.79
3200 3587 0.802494 CATTTTTAGTGCGCCGGACT 59.198 50.000 17.13 17.13 0.00 3.85
3201 3588 1.084289 ATTTTTAGTGCGCCGGACTC 58.916 50.000 16.35 0.00 0.00 3.36
3202 3589 0.249953 TTTTTAGTGCGCCGGACTCA 60.250 50.000 16.35 0.18 0.00 3.41
3203 3590 0.249953 TTTTAGTGCGCCGGACTCAA 60.250 50.000 16.35 8.08 0.00 3.02
3204 3591 0.947180 TTTAGTGCGCCGGACTCAAC 60.947 55.000 16.35 0.00 0.00 3.18
3205 3592 2.089887 TTAGTGCGCCGGACTCAACA 62.090 55.000 16.35 0.00 0.00 3.33
3206 3593 1.884075 TAGTGCGCCGGACTCAACAT 61.884 55.000 16.35 0.00 0.00 2.71
3207 3594 2.031919 TGCGCCGGACTCAACATT 59.968 55.556 5.05 0.00 0.00 2.71
3208 3595 2.324330 TGCGCCGGACTCAACATTG 61.324 57.895 5.05 0.00 0.00 2.82
3209 3596 2.480555 CGCCGGACTCAACATTGC 59.519 61.111 5.05 0.00 0.00 3.56
3210 3597 2.034879 CGCCGGACTCAACATTGCT 61.035 57.895 5.05 0.00 0.00 3.91
3211 3598 1.577328 CGCCGGACTCAACATTGCTT 61.577 55.000 5.05 0.00 0.00 3.91
3212 3599 0.598065 GCCGGACTCAACATTGCTTT 59.402 50.000 5.05 0.00 0.00 3.51
3213 3600 1.810151 GCCGGACTCAACATTGCTTTA 59.190 47.619 5.05 0.00 0.00 1.85
3214 3601 2.159517 GCCGGACTCAACATTGCTTTAG 60.160 50.000 5.05 0.00 0.00 1.85
3215 3602 2.159517 CCGGACTCAACATTGCTTTAGC 60.160 50.000 0.00 0.00 42.50 3.09
3232 3619 6.232139 CTTTAGCAAAAGCCCAAAAATGAG 57.768 37.500 0.00 0.00 35.98 2.90
3233 3620 3.843893 AGCAAAAGCCCAAAAATGAGT 57.156 38.095 0.00 0.00 0.00 3.41
3234 3621 3.469739 AGCAAAAGCCCAAAAATGAGTG 58.530 40.909 0.00 0.00 0.00 3.51
3235 3622 2.031769 GCAAAAGCCCAAAAATGAGTGC 60.032 45.455 0.00 0.00 0.00 4.40
3236 3623 3.204526 CAAAAGCCCAAAAATGAGTGCA 58.795 40.909 0.00 0.00 0.00 4.57
3237 3624 3.557228 AAAGCCCAAAAATGAGTGCAA 57.443 38.095 0.00 0.00 0.00 4.08
3238 3625 3.557228 AAGCCCAAAAATGAGTGCAAA 57.443 38.095 0.00 0.00 0.00 3.68
3239 3626 3.557228 AGCCCAAAAATGAGTGCAAAA 57.443 38.095 0.00 0.00 0.00 2.44
3240 3627 3.883669 AGCCCAAAAATGAGTGCAAAAA 58.116 36.364 0.00 0.00 0.00 1.94
3266 3653 7.851822 AAATTACAGTGTAAATTGTGAAGCG 57.148 32.000 19.19 0.00 0.00 4.68
3267 3654 3.268013 ACAGTGTAAATTGTGAAGCGC 57.732 42.857 0.00 0.00 0.00 5.92
3268 3655 2.233355 CAGTGTAAATTGTGAAGCGCG 58.767 47.619 0.00 0.00 0.00 6.86
3269 3656 1.871039 AGTGTAAATTGTGAAGCGCGT 59.129 42.857 8.43 0.00 0.00 6.01
3270 3657 2.096417 AGTGTAAATTGTGAAGCGCGTC 60.096 45.455 16.84 16.84 0.00 5.19
3271 3658 1.195900 TGTAAATTGTGAAGCGCGTCC 59.804 47.619 20.62 12.16 0.00 4.79
3272 3659 1.195900 GTAAATTGTGAAGCGCGTCCA 59.804 47.619 20.62 14.54 0.00 4.02
3273 3660 0.665835 AAATTGTGAAGCGCGTCCAA 59.334 45.000 20.62 21.33 0.00 3.53
3274 3661 0.881118 AATTGTGAAGCGCGTCCAAT 59.119 45.000 23.51 23.51 0.00 3.16
3275 3662 0.447801 ATTGTGAAGCGCGTCCAATC 59.552 50.000 23.51 12.99 0.00 2.67
3276 3663 1.573829 TTGTGAAGCGCGTCCAATCC 61.574 55.000 20.62 4.30 0.00 3.01
3277 3664 2.813474 TGAAGCGCGTCCAATCCG 60.813 61.111 20.62 0.00 0.00 4.18
3278 3665 3.564027 GAAGCGCGTCCAATCCGG 61.564 66.667 12.67 0.00 0.00 5.14
3279 3666 4.077184 AAGCGCGTCCAATCCGGA 62.077 61.111 6.61 6.61 43.61 5.14
3286 3673 3.501866 TCCAATCCGGAGCCCAAA 58.498 55.556 11.34 0.00 39.64 3.28
3287 3674 1.770985 TCCAATCCGGAGCCCAAAA 59.229 52.632 11.34 0.00 39.64 2.44
3288 3675 0.334676 TCCAATCCGGAGCCCAAAAT 59.665 50.000 11.34 0.00 39.64 1.82
3289 3676 1.566703 TCCAATCCGGAGCCCAAAATA 59.433 47.619 11.34 0.00 39.64 1.40
3290 3677 2.176798 TCCAATCCGGAGCCCAAAATAT 59.823 45.455 11.34 0.00 39.64 1.28
3291 3678 3.396276 TCCAATCCGGAGCCCAAAATATA 59.604 43.478 11.34 0.00 39.64 0.86
3292 3679 3.506067 CCAATCCGGAGCCCAAAATATAC 59.494 47.826 11.34 0.00 36.56 1.47
3293 3680 4.398319 CAATCCGGAGCCCAAAATATACT 58.602 43.478 11.34 0.00 0.00 2.12
3294 3681 3.485463 TCCGGAGCCCAAAATATACTG 57.515 47.619 0.00 0.00 0.00 2.74
3295 3682 1.880027 CCGGAGCCCAAAATATACTGC 59.120 52.381 0.00 0.00 0.00 4.40
3296 3683 2.571212 CGGAGCCCAAAATATACTGCA 58.429 47.619 0.00 0.00 0.00 4.41
3297 3684 2.290641 CGGAGCCCAAAATATACTGCAC 59.709 50.000 0.00 0.00 0.00 4.57
3298 3685 3.287222 GGAGCCCAAAATATACTGCACA 58.713 45.455 0.00 0.00 0.00 4.57
3299 3686 3.066760 GGAGCCCAAAATATACTGCACAC 59.933 47.826 0.00 0.00 0.00 3.82
3300 3687 2.682856 AGCCCAAAATATACTGCACACG 59.317 45.455 0.00 0.00 0.00 4.49
3301 3688 2.680841 GCCCAAAATATACTGCACACGA 59.319 45.455 0.00 0.00 0.00 4.35
3302 3689 3.315191 GCCCAAAATATACTGCACACGAT 59.685 43.478 0.00 0.00 0.00 3.73
3303 3690 4.513692 GCCCAAAATATACTGCACACGATA 59.486 41.667 0.00 0.00 0.00 2.92
3304 3691 5.334105 GCCCAAAATATACTGCACACGATAG 60.334 44.000 0.00 0.00 46.19 2.08
3305 3692 5.334105 CCCAAAATATACTGCACACGATAGC 60.334 44.000 0.00 0.00 42.67 2.97
3306 3693 5.365942 CAAAATATACTGCACACGATAGCG 58.634 41.667 0.00 0.00 44.79 4.26
3331 3718 2.725815 GCGCGCGCTCAAAAACTT 60.726 55.556 44.38 0.00 38.26 2.66
3332 3719 2.292916 GCGCGCGCTCAAAAACTTT 61.293 52.632 44.38 0.00 38.26 2.66
3333 3720 1.807242 GCGCGCGCTCAAAAACTTTT 61.807 50.000 44.38 0.00 38.26 2.27
3334 3721 1.390820 CGCGCGCTCAAAAACTTTTA 58.609 45.000 30.48 0.00 0.00 1.52
3335 3722 1.378807 CGCGCGCTCAAAAACTTTTAG 59.621 47.619 30.48 3.74 0.00 1.85
3336 3723 1.122501 GCGCGCTCAAAAACTTTTAGC 59.877 47.619 26.67 0.00 0.00 3.09
3337 3724 1.378807 CGCGCTCAAAAACTTTTAGCG 59.621 47.619 20.08 20.08 43.98 4.26
3339 3726 2.650608 CGCTCAAAAACTTTTAGCGCT 58.349 42.857 17.26 17.26 40.07 5.92
3340 3727 3.805823 CGCTCAAAAACTTTTAGCGCTA 58.194 40.909 14.45 14.45 40.07 4.26
3341 3728 3.598246 CGCTCAAAAACTTTTAGCGCTAC 59.402 43.478 18.63 0.00 40.07 3.58
3342 3729 4.533222 GCTCAAAAACTTTTAGCGCTACA 58.467 39.130 18.63 8.18 0.00 2.74
3343 3730 4.613031 GCTCAAAAACTTTTAGCGCTACAG 59.387 41.667 18.63 18.01 0.00 2.74
3344 3731 4.533222 TCAAAAACTTTTAGCGCTACAGC 58.467 39.130 18.63 0.00 37.78 4.40
3346 3733 4.830826 AAAACTTTTAGCGCTACAGCTT 57.169 36.364 18.63 10.81 46.80 3.74
3347 3734 4.406001 AAACTTTTAGCGCTACAGCTTC 57.594 40.909 18.63 0.00 46.80 3.86
3348 3735 3.320673 ACTTTTAGCGCTACAGCTTCT 57.679 42.857 18.63 0.00 46.80 2.85
3349 3736 2.996621 ACTTTTAGCGCTACAGCTTCTG 59.003 45.455 18.63 4.43 46.80 3.02
3350 3737 1.359848 TTTAGCGCTACAGCTTCTGC 58.640 50.000 18.63 0.00 46.80 4.26
3360 3747 4.393693 GCTTCTGCTGGAGCTGTT 57.606 55.556 16.22 0.00 42.66 3.16
3361 3748 2.169842 GCTTCTGCTGGAGCTGTTC 58.830 57.895 16.22 0.00 42.66 3.18
3362 3749 1.633852 GCTTCTGCTGGAGCTGTTCG 61.634 60.000 16.22 0.00 42.66 3.95
3363 3750 1.004560 TTCTGCTGGAGCTGTTCGG 60.005 57.895 0.00 0.00 42.66 4.30
3364 3751 3.123620 CTGCTGGAGCTGTTCGGC 61.124 66.667 0.00 0.00 42.66 5.54
3370 3757 4.742201 GAGCTGTTCGGCGCCTCA 62.742 66.667 26.68 18.85 37.29 3.86
3371 3758 4.314440 AGCTGTTCGGCGCCTCAA 62.314 61.111 26.68 14.51 37.29 3.02
3372 3759 3.353836 GCTGTTCGGCGCCTCAAA 61.354 61.111 26.68 13.28 0.00 2.69
3373 3760 2.903547 GCTGTTCGGCGCCTCAAAA 61.904 57.895 26.68 11.28 0.00 2.44
3374 3761 1.652012 CTGTTCGGCGCCTCAAAAA 59.348 52.632 26.68 10.20 0.00 1.94
3410 3797 2.688364 CGGAGCTCTTTTTGAACACC 57.312 50.000 14.64 0.00 0.00 4.16
3411 3798 2.222027 CGGAGCTCTTTTTGAACACCT 58.778 47.619 14.64 0.00 0.00 4.00
3412 3799 2.031682 CGGAGCTCTTTTTGAACACCTG 60.032 50.000 14.64 0.00 0.00 4.00
3413 3800 2.952310 GGAGCTCTTTTTGAACACCTGT 59.048 45.455 14.64 0.00 0.00 4.00
3414 3801 3.381590 GGAGCTCTTTTTGAACACCTGTT 59.618 43.478 14.64 0.00 41.64 3.16
3415 3802 4.354587 GAGCTCTTTTTGAACACCTGTTG 58.645 43.478 6.43 0.00 38.56 3.33
3416 3803 3.131046 AGCTCTTTTTGAACACCTGTTGG 59.869 43.478 0.00 0.00 38.56 3.77
3417 3804 3.130340 GCTCTTTTTGAACACCTGTTGGA 59.870 43.478 0.00 0.00 38.56 3.53
3418 3805 4.734695 GCTCTTTTTGAACACCTGTTGGAG 60.735 45.833 0.00 0.00 38.56 3.86
3419 3806 4.594970 TCTTTTTGAACACCTGTTGGAGA 58.405 39.130 0.00 0.00 38.56 3.71
3420 3807 5.200483 TCTTTTTGAACACCTGTTGGAGAT 58.800 37.500 0.00 0.00 38.56 2.75
3421 3808 4.916983 TTTTGAACACCTGTTGGAGATG 57.083 40.909 0.00 0.00 38.56 2.90
3422 3809 1.896220 TGAACACCTGTTGGAGATGC 58.104 50.000 0.00 0.00 38.56 3.91
3423 3810 1.421268 TGAACACCTGTTGGAGATGCT 59.579 47.619 0.00 0.00 38.56 3.79
3424 3811 2.079925 GAACACCTGTTGGAGATGCTC 58.920 52.381 0.00 0.00 38.56 4.26
3425 3812 1.356124 ACACCTGTTGGAGATGCTCT 58.644 50.000 0.00 0.00 37.04 4.09
3426 3813 2.540383 ACACCTGTTGGAGATGCTCTA 58.460 47.619 0.00 0.00 37.04 2.43
3427 3814 2.906389 ACACCTGTTGGAGATGCTCTAA 59.094 45.455 0.00 0.00 37.04 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.112315 AACAAGAATGGTTGCCGCCA 61.112 50.000 0.00 0.00 43.48 5.69
34 35 0.388520 GAACAAGAATGGTTGCCGCC 60.389 55.000 0.00 0.00 0.00 6.13
165 166 1.683629 GGGAGTGTGGTCACCAAACAA 60.684 52.381 20.03 0.00 43.85 2.83
181 182 1.450312 GACCGGCATCAACAGGGAG 60.450 63.158 0.00 0.00 0.00 4.30
196 197 2.777459 TAGAGGAGAAGGGGATGACC 57.223 55.000 0.00 0.00 39.11 4.02
217 218 0.181350 GGAACTAGGACCATGCTGGG 59.819 60.000 7.06 0.29 43.37 4.45
231 232 0.250338 GAACGAAGCACCAGGGAACT 60.250 55.000 0.00 0.00 46.44 3.01
281 282 7.516452 AGCTAGAGGATAAATCAAAGAAGCAT 58.484 34.615 0.00 0.00 0.00 3.79
289 290 7.124573 TGCTACAAGCTAGAGGATAAATCAA 57.875 36.000 0.00 0.00 42.97 2.57
394 405 4.597404 TGCATTAACAAAGCCATCAACA 57.403 36.364 0.00 0.00 0.00 3.33
413 424 1.815840 GAGCCTAGCCCGACTTTGC 60.816 63.158 0.00 0.00 0.00 3.68
444 455 2.039480 AGAAAAGACATCAGCTGAGCCA 59.961 45.455 22.96 0.00 0.00 4.75
446 457 3.598299 AGAGAAAAGACATCAGCTGAGC 58.402 45.455 22.96 13.59 0.00 4.26
450 461 8.401490 ACATTTTTAGAGAAAAGACATCAGCT 57.599 30.769 0.00 0.00 35.96 4.24
474 485 3.126343 CGTAGCCCCATACACAAAAGAAC 59.874 47.826 0.00 0.00 0.00 3.01
479 490 0.253610 CCCGTAGCCCCATACACAAA 59.746 55.000 0.00 0.00 0.00 2.83
491 502 2.750237 CCCTTGTTGGCCCGTAGC 60.750 66.667 0.00 0.00 42.60 3.58
492 503 0.958876 GAACCCTTGTTGGCCCGTAG 60.959 60.000 0.00 0.00 33.97 3.51
493 504 1.073548 GAACCCTTGTTGGCCCGTA 59.926 57.895 0.00 0.00 33.97 4.02
494 505 2.203437 GAACCCTTGTTGGCCCGT 60.203 61.111 0.00 0.00 33.97 5.28
588 892 0.455410 TAGGACGCATTTGCCATTGC 59.545 50.000 0.00 0.00 37.91 3.56
589 893 3.441496 AATAGGACGCATTTGCCATTG 57.559 42.857 0.00 0.00 37.91 2.82
590 894 3.181476 GGAAATAGGACGCATTTGCCATT 60.181 43.478 0.00 0.00 37.91 3.16
591 895 2.362077 GGAAATAGGACGCATTTGCCAT 59.638 45.455 0.00 0.00 37.91 4.40
592 896 1.748493 GGAAATAGGACGCATTTGCCA 59.252 47.619 0.00 0.00 37.91 4.92
593 897 1.748493 TGGAAATAGGACGCATTTGCC 59.252 47.619 0.00 0.00 34.03 4.52
594 898 2.423538 ACTGGAAATAGGACGCATTTGC 59.576 45.455 0.00 0.00 35.13 3.68
598 902 3.744530 GCCTAACTGGAAATAGGACGCAT 60.745 47.826 3.09 0.00 41.03 4.73
629 935 2.770802 GTTAGGTAGGAGGGGAGTTTCC 59.229 54.545 0.00 0.00 35.23 3.13
706 1012 9.719355 GTATTCAATCCCCTTTAACAAATGTTT 57.281 29.630 3.85 0.00 39.31 2.83
713 1019 5.045432 ACCGAGTATTCAATCCCCTTTAACA 60.045 40.000 0.00 0.00 0.00 2.41
747 1054 2.517959 TCTGCAAAATGCTTAGTGGCT 58.482 42.857 3.78 0.00 45.31 4.75
835 1142 2.159531 TCCAAAATGAAAGATGAGCGCG 60.160 45.455 0.00 0.00 0.00 6.86
902 1210 1.187271 CGTTACATACATCAGCGTCGC 59.813 52.381 9.80 9.80 0.00 5.19
910 1218 8.301720 TCTTATATGGACACCGTTACATACATC 58.698 37.037 0.00 0.00 0.00 3.06
927 1235 8.211116 ACGGATCTTCGTACTATCTTATATGG 57.789 38.462 0.00 0.00 41.98 2.74
937 1245 4.256110 TGTCAGAACGGATCTTCGTACTA 58.744 43.478 0.00 0.00 43.07 1.82
938 1246 3.079578 TGTCAGAACGGATCTTCGTACT 58.920 45.455 0.00 0.00 43.07 2.73
939 1247 3.482722 TGTCAGAACGGATCTTCGTAC 57.517 47.619 0.00 0.00 43.07 3.67
951 1259 2.334838 AGAACCGCGTAATGTCAGAAC 58.665 47.619 4.92 0.00 0.00 3.01
953 1261 1.542472 TGAGAACCGCGTAATGTCAGA 59.458 47.619 4.92 0.00 0.00 3.27
1026 1334 2.119801 CTGCAAGCAGGTACAGGATT 57.880 50.000 14.10 0.00 40.17 3.01
1537 1853 2.442188 GGCGTGATCACCGTCGTTC 61.442 63.158 20.03 2.39 0.00 3.95
1583 1899 5.619607 CGTTCAGTAAAAAGGAAATGACACG 59.380 40.000 0.00 0.00 0.00 4.49
1614 1930 2.485122 GCGGGCAAAATCACCTCG 59.515 61.111 0.00 0.00 0.00 4.63
1651 1967 2.659244 GTTCGTCACGCCGTCCAA 60.659 61.111 0.00 0.00 0.00 3.53
1714 2030 3.426568 GCTGCGGTGGAAGCTCAC 61.427 66.667 0.00 0.00 42.05 3.51
1951 2267 2.284151 GTCCTCCTCCCCCTCCTC 59.716 72.222 0.00 0.00 0.00 3.71
2020 2336 2.476051 CCACGTCTTGATGCGCAC 59.524 61.111 14.90 7.75 0.00 5.34
2055 2371 2.668632 GTGATGTTGGAGGCCCGA 59.331 61.111 0.00 0.00 34.29 5.14
2206 2522 4.500116 GCTGCTCGACGTCCCCTC 62.500 72.222 10.58 0.00 0.00 4.30
2382 2747 2.972021 CCCTTGGGTTGGTCTCATTTTT 59.028 45.455 0.00 0.00 0.00 1.94
2383 2748 2.608623 CCCTTGGGTTGGTCTCATTTT 58.391 47.619 0.00 0.00 0.00 1.82
2385 2750 0.251787 GCCCTTGGGTTGGTCTCATT 60.252 55.000 7.61 0.00 0.00 2.57
2386 2751 1.142688 AGCCCTTGGGTTGGTCTCAT 61.143 55.000 7.61 0.00 0.00 2.90
2387 2752 0.474854 TAGCCCTTGGGTTGGTCTCA 60.475 55.000 7.61 0.00 34.28 3.27
2388 2753 0.696501 TTAGCCCTTGGGTTGGTCTC 59.303 55.000 7.61 0.00 34.28 3.36
2389 2754 0.404426 GTTAGCCCTTGGGTTGGTCT 59.596 55.000 7.61 0.00 34.28 3.85
2390 2755 0.611062 GGTTAGCCCTTGGGTTGGTC 60.611 60.000 7.61 0.00 34.28 4.02
2391 2756 1.463375 GGTTAGCCCTTGGGTTGGT 59.537 57.895 7.61 0.00 34.28 3.67
2392 2757 4.434483 GGTTAGCCCTTGGGTTGG 57.566 61.111 7.61 0.00 34.28 3.77
2402 2767 2.180432 AAAGTCAACGAGGGTTAGCC 57.820 50.000 0.00 0.00 33.72 3.93
2403 2768 3.400255 AGAAAAGTCAACGAGGGTTAGC 58.600 45.455 0.00 0.00 33.72 3.09
2404 2769 7.668525 ATAAAGAAAAGTCAACGAGGGTTAG 57.331 36.000 0.00 0.00 33.72 2.34
2405 2770 8.587608 TCTATAAAGAAAAGTCAACGAGGGTTA 58.412 33.333 0.00 0.00 33.72 2.85
2406 2771 7.447594 TCTATAAAGAAAAGTCAACGAGGGTT 58.552 34.615 0.00 0.00 36.63 4.11
2407 2772 7.001099 TCTATAAAGAAAAGTCAACGAGGGT 57.999 36.000 0.00 0.00 0.00 4.34
2408 2773 7.817962 TCTTCTATAAAGAAAAGTCAACGAGGG 59.182 37.037 0.00 0.00 41.19 4.30
2409 2774 8.758633 TCTTCTATAAAGAAAAGTCAACGAGG 57.241 34.615 0.00 0.00 41.19 4.63
2415 2780 9.204570 CGGAGTTTCTTCTATAAAGAAAAGTCA 57.795 33.333 12.98 0.00 44.79 3.41
2416 2781 9.205719 ACGGAGTTTCTTCTATAAAGAAAAGTC 57.794 33.333 12.98 12.25 44.79 3.01
2417 2782 8.989980 CACGGAGTTTCTTCTATAAAGAAAAGT 58.010 33.333 12.98 9.12 44.79 2.66
2418 2783 9.204570 TCACGGAGTTTCTTCTATAAAGAAAAG 57.795 33.333 12.98 8.66 44.79 2.27
2419 2784 9.204570 CTCACGGAGTTTCTTCTATAAAGAAAA 57.795 33.333 12.98 0.00 44.79 2.29
2420 2785 7.331193 GCTCACGGAGTTTCTTCTATAAAGAAA 59.669 37.037 8.48 8.48 41.61 2.52
2421 2786 6.812160 GCTCACGGAGTTTCTTCTATAAAGAA 59.188 38.462 0.00 0.00 41.61 2.52
2422 2787 6.071560 TGCTCACGGAGTTTCTTCTATAAAGA 60.072 38.462 3.38 0.00 41.61 2.52
2423 2788 6.035112 GTGCTCACGGAGTTTCTTCTATAAAG 59.965 42.308 3.38 0.00 41.61 1.85
2424 2789 5.867716 GTGCTCACGGAGTTTCTTCTATAAA 59.132 40.000 3.38 0.00 41.61 1.40
2425 2790 5.408356 GTGCTCACGGAGTTTCTTCTATAA 58.592 41.667 3.38 0.00 41.61 0.98
2426 2791 4.142227 GGTGCTCACGGAGTTTCTTCTATA 60.142 45.833 3.38 0.00 41.61 1.31
2427 2792 3.368531 GGTGCTCACGGAGTTTCTTCTAT 60.369 47.826 3.38 0.00 41.61 1.98
2428 2793 2.029290 GGTGCTCACGGAGTTTCTTCTA 60.029 50.000 3.38 0.00 41.61 2.10
2429 2794 1.270358 GGTGCTCACGGAGTTTCTTCT 60.270 52.381 3.38 0.00 41.61 2.85
2430 2795 1.149148 GGTGCTCACGGAGTTTCTTC 58.851 55.000 3.38 0.00 41.61 2.87
2431 2796 0.468226 TGGTGCTCACGGAGTTTCTT 59.532 50.000 3.38 0.00 41.61 2.52
2432 2797 0.249911 GTGGTGCTCACGGAGTTTCT 60.250 55.000 3.38 0.00 41.61 2.52
2433 2798 2.235546 GTGGTGCTCACGGAGTTTC 58.764 57.895 3.38 0.00 41.61 2.78
2434 2799 4.456806 GTGGTGCTCACGGAGTTT 57.543 55.556 3.38 0.00 41.61 2.66
2441 2806 3.490759 CGGATGCGTGGTGCTCAC 61.491 66.667 0.00 1.50 46.63 3.51
2442 2807 4.002506 ACGGATGCGTGGTGCTCA 62.003 61.111 12.84 0.00 46.63 4.26
2443 2808 3.490759 CACGGATGCGTGGTGCTC 61.491 66.667 29.56 0.00 46.63 4.26
2458 2823 2.027625 CAAGTTCGAGTCCCGGCAC 61.028 63.158 0.00 0.00 39.14 5.01
2459 2824 2.342279 CAAGTTCGAGTCCCGGCA 59.658 61.111 0.00 0.00 39.14 5.69
2460 2825 2.434359 CCAAGTTCGAGTCCCGGC 60.434 66.667 0.00 0.00 39.14 6.13
2461 2826 2.264794 CCCAAGTTCGAGTCCCGG 59.735 66.667 0.00 0.00 39.14 5.73
2462 2827 1.374252 CACCCAAGTTCGAGTCCCG 60.374 63.158 0.00 0.00 40.25 5.14
2463 2828 1.003718 CCACCCAAGTTCGAGTCCC 60.004 63.158 0.00 0.00 0.00 4.46
2464 2829 1.003718 CCCACCCAAGTTCGAGTCC 60.004 63.158 0.00 0.00 0.00 3.85
2465 2830 1.671379 GCCCACCCAAGTTCGAGTC 60.671 63.158 0.00 0.00 0.00 3.36
2466 2831 2.147387 AGCCCACCCAAGTTCGAGT 61.147 57.895 0.00 0.00 0.00 4.18
2467 2832 1.672356 CAGCCCACCCAAGTTCGAG 60.672 63.158 0.00 0.00 0.00 4.04
2468 2833 2.429930 CAGCCCACCCAAGTTCGA 59.570 61.111 0.00 0.00 0.00 3.71
2469 2834 2.672996 CCAGCCCACCCAAGTTCG 60.673 66.667 0.00 0.00 0.00 3.95
2470 2835 2.991540 GCCAGCCCACCCAAGTTC 60.992 66.667 0.00 0.00 0.00 3.01
2471 2836 3.815407 CTGCCAGCCCACCCAAGTT 62.815 63.158 0.00 0.00 0.00 2.66
2472 2837 4.290622 CTGCCAGCCCACCCAAGT 62.291 66.667 0.00 0.00 0.00 3.16
2478 2843 4.982701 AGGTTGCTGCCAGCCCAC 62.983 66.667 15.29 10.81 42.79 4.61
2479 2844 4.666253 GAGGTTGCTGCCAGCCCA 62.666 66.667 15.29 0.00 42.79 5.36
2480 2845 4.666253 TGAGGTTGCTGCCAGCCC 62.666 66.667 15.29 9.16 42.79 5.19
2481 2846 3.060615 CTGAGGTTGCTGCCAGCC 61.061 66.667 15.29 0.00 41.51 4.85
2482 2847 3.745803 GCTGAGGTTGCTGCCAGC 61.746 66.667 10.45 10.45 44.00 4.85
2483 2848 2.033757 AGCTGAGGTTGCTGCCAG 59.966 61.111 0.00 0.00 39.56 4.85
2488 2853 3.564345 CTGGGCAGCTGAGGTTGCT 62.564 63.158 20.43 0.00 46.51 3.91
2489 2854 3.060615 CTGGGCAGCTGAGGTTGC 61.061 66.667 20.43 0.23 46.58 4.17
2499 2864 2.674380 GACCTGTTGGCTGGGCAG 60.674 66.667 0.00 0.00 41.00 4.85
2500 2865 4.641645 CGACCTGTTGGCTGGGCA 62.642 66.667 0.00 0.00 41.36 5.36
2501 2866 4.329545 TCGACCTGTTGGCTGGGC 62.330 66.667 0.00 0.00 38.27 5.36
2502 2867 2.358737 GTCGACCTGTTGGCTGGG 60.359 66.667 3.51 0.00 37.95 4.45
2503 2868 2.738521 CGTCGACCTGTTGGCTGG 60.739 66.667 10.58 0.00 39.33 4.85
2504 2869 3.414700 GCGTCGACCTGTTGGCTG 61.415 66.667 10.58 0.00 36.63 4.85
2505 2870 4.681978 GGCGTCGACCTGTTGGCT 62.682 66.667 10.58 0.00 36.63 4.75
2507 2872 4.003788 AGGGCGTCGACCTGTTGG 62.004 66.667 21.81 0.00 41.17 3.77
2512 2877 4.680537 AGGACAGGGCGTCGACCT 62.681 66.667 15.92 15.92 45.50 3.85
2513 2878 4.131088 GAGGACAGGGCGTCGACC 62.131 72.222 9.89 9.89 46.42 4.79
2514 2879 2.227089 ATTGAGGACAGGGCGTCGAC 62.227 60.000 5.18 5.18 46.42 4.20
2515 2880 0.681887 TATTGAGGACAGGGCGTCGA 60.682 55.000 0.00 0.00 46.42 4.20
2516 2881 0.174845 TTATTGAGGACAGGGCGTCG 59.825 55.000 0.00 0.00 46.42 5.12
2517 2882 1.653151 GTTATTGAGGACAGGGCGTC 58.347 55.000 0.00 0.00 44.57 5.19
2518 2883 0.252197 GGTTATTGAGGACAGGGCGT 59.748 55.000 0.00 0.00 0.00 5.68
2519 2884 0.251916 TGGTTATTGAGGACAGGGCG 59.748 55.000 0.00 0.00 0.00 6.13
2520 2885 2.092323 GTTGGTTATTGAGGACAGGGC 58.908 52.381 0.00 0.00 0.00 5.19
2521 2886 2.041081 TGGTTGGTTATTGAGGACAGGG 59.959 50.000 0.00 0.00 0.00 4.45
2522 2887 3.433306 TGGTTGGTTATTGAGGACAGG 57.567 47.619 0.00 0.00 0.00 4.00
2523 2888 5.256474 AGAATGGTTGGTTATTGAGGACAG 58.744 41.667 0.00 0.00 0.00 3.51
2524 2889 5.014123 AGAGAATGGTTGGTTATTGAGGACA 59.986 40.000 0.00 0.00 0.00 4.02
2525 2890 5.501156 AGAGAATGGTTGGTTATTGAGGAC 58.499 41.667 0.00 0.00 0.00 3.85
2526 2891 5.779241 AGAGAATGGTTGGTTATTGAGGA 57.221 39.130 0.00 0.00 0.00 3.71
2527 2892 5.823045 GGTAGAGAATGGTTGGTTATTGAGG 59.177 44.000 0.00 0.00 0.00 3.86
2528 2893 5.523916 CGGTAGAGAATGGTTGGTTATTGAG 59.476 44.000 0.00 0.00 0.00 3.02
2529 2894 5.188163 TCGGTAGAGAATGGTTGGTTATTGA 59.812 40.000 0.00 0.00 0.00 2.57
2530 2895 5.293569 GTCGGTAGAGAATGGTTGGTTATTG 59.706 44.000 0.00 0.00 0.00 1.90
2531 2896 5.046159 TGTCGGTAGAGAATGGTTGGTTATT 60.046 40.000 0.00 0.00 0.00 1.40
2532 2897 4.468510 TGTCGGTAGAGAATGGTTGGTTAT 59.531 41.667 0.00 0.00 0.00 1.89
2533 2898 3.833650 TGTCGGTAGAGAATGGTTGGTTA 59.166 43.478 0.00 0.00 0.00 2.85
2534 2899 2.635915 TGTCGGTAGAGAATGGTTGGTT 59.364 45.455 0.00 0.00 0.00 3.67
2535 2900 2.253610 TGTCGGTAGAGAATGGTTGGT 58.746 47.619 0.00 0.00 0.00 3.67
2536 2901 3.056107 TCTTGTCGGTAGAGAATGGTTGG 60.056 47.826 0.00 0.00 0.00 3.77
2537 2902 4.082190 TCTCTTGTCGGTAGAGAATGGTTG 60.082 45.833 8.85 0.00 43.78 3.77
2538 2903 4.087182 TCTCTTGTCGGTAGAGAATGGTT 58.913 43.478 8.85 0.00 43.78 3.67
2539 2904 3.698289 TCTCTTGTCGGTAGAGAATGGT 58.302 45.455 8.85 0.00 43.78 3.55
2544 2909 4.289238 ACTCTTCTCTTGTCGGTAGAGA 57.711 45.455 0.00 7.63 44.75 3.10
2545 2910 4.456222 TGAACTCTTCTCTTGTCGGTAGAG 59.544 45.833 0.00 0.00 40.39 2.43
2546 2911 4.215827 GTGAACTCTTCTCTTGTCGGTAGA 59.784 45.833 0.00 0.00 0.00 2.59
2547 2912 4.023107 TGTGAACTCTTCTCTTGTCGGTAG 60.023 45.833 0.00 0.00 0.00 3.18
2548 2913 3.887110 TGTGAACTCTTCTCTTGTCGGTA 59.113 43.478 0.00 0.00 0.00 4.02
2549 2914 2.693591 TGTGAACTCTTCTCTTGTCGGT 59.306 45.455 0.00 0.00 0.00 4.69
2550 2915 3.053455 GTGTGAACTCTTCTCTTGTCGG 58.947 50.000 0.00 0.00 0.00 4.79
2551 2916 2.721603 CGTGTGAACTCTTCTCTTGTCG 59.278 50.000 0.00 0.00 0.00 4.35
2552 2917 3.053455 CCGTGTGAACTCTTCTCTTGTC 58.947 50.000 0.00 0.00 0.00 3.18
2553 2918 2.431057 ACCGTGTGAACTCTTCTCTTGT 59.569 45.455 0.00 0.00 0.00 3.16
2554 2919 3.099267 ACCGTGTGAACTCTTCTCTTG 57.901 47.619 0.00 0.00 0.00 3.02
2555 2920 3.821421 AACCGTGTGAACTCTTCTCTT 57.179 42.857 0.00 0.00 0.00 2.85
2556 2921 3.821421 AAACCGTGTGAACTCTTCTCT 57.179 42.857 0.00 0.00 0.00 3.10
2557 2922 4.085210 CGTAAAACCGTGTGAACTCTTCTC 60.085 45.833 0.00 0.00 0.00 2.87
2690 3058 7.061673 TCGAAATTAACCTGCAAAAATTCATCG 59.938 33.333 0.00 0.16 0.00 3.84
2718 3101 9.920133 TTATACTGCTTGTATGCAAAATTTCAA 57.080 25.926 11.41 0.00 42.83 2.69
2758 3141 4.221482 ACTGCTTGATTTCTGAAATTCCCC 59.779 41.667 16.14 5.08 0.00 4.81
2759 3142 5.397142 ACTGCTTGATTTCTGAAATTCCC 57.603 39.130 16.14 5.41 0.00 3.97
2764 3147 5.827797 AGTTGGTACTGCTTGATTTCTGAAA 59.172 36.000 5.15 5.15 31.99 2.69
2789 3172 0.960364 TGGCCGTGATCTTTTCAGCC 60.960 55.000 0.00 0.00 43.01 4.85
2791 3174 2.358957 TCATGGCCGTGATCTTTTCAG 58.641 47.619 24.15 0.00 34.17 3.02
2873 3259 1.065126 CAATCTCCTCCTGTTGGTCCC 60.065 57.143 0.00 0.00 34.23 4.46
3085 3472 2.147150 GAAAGTGAGCTTGTGTCCTCC 58.853 52.381 0.00 0.00 34.71 4.30
3095 3482 6.882656 TCTTAGCTATTGATGAAAGTGAGCT 58.117 36.000 0.00 0.00 41.46 4.09
3107 3494 6.643388 TGTTGAAGATGCTCTTAGCTATTGA 58.357 36.000 0.00 0.00 42.97 2.57
3108 3495 6.018098 CCTGTTGAAGATGCTCTTAGCTATTG 60.018 42.308 0.00 0.00 42.97 1.90
3109 3496 6.054295 CCTGTTGAAGATGCTCTTAGCTATT 58.946 40.000 0.00 0.00 42.97 1.73
3110 3497 5.130145 ACCTGTTGAAGATGCTCTTAGCTAT 59.870 40.000 0.00 0.00 42.97 2.97
3111 3498 4.467795 ACCTGTTGAAGATGCTCTTAGCTA 59.532 41.667 0.03 0.00 42.97 3.32
3112 3499 3.262915 ACCTGTTGAAGATGCTCTTAGCT 59.737 43.478 0.00 0.00 42.97 3.32
3113 3500 3.373439 CACCTGTTGAAGATGCTCTTAGC 59.627 47.826 0.00 0.00 36.73 3.09
3114 3501 3.937706 CCACCTGTTGAAGATGCTCTTAG 59.062 47.826 0.00 0.00 36.73 2.18
3115 3502 3.582647 TCCACCTGTTGAAGATGCTCTTA 59.417 43.478 0.00 0.00 36.73 2.10
3116 3503 2.373169 TCCACCTGTTGAAGATGCTCTT 59.627 45.455 0.00 0.00 39.87 2.85
3117 3504 1.980765 TCCACCTGTTGAAGATGCTCT 59.019 47.619 0.00 0.00 0.00 4.09
3118 3505 2.079925 GTCCACCTGTTGAAGATGCTC 58.920 52.381 0.00 0.00 0.00 4.26
3119 3506 1.421268 TGTCCACCTGTTGAAGATGCT 59.579 47.619 0.00 0.00 0.00 3.79
3120 3507 1.896220 TGTCCACCTGTTGAAGATGC 58.104 50.000 0.00 0.00 0.00 3.91
3121 3508 4.916983 TTTTGTCCACCTGTTGAAGATG 57.083 40.909 0.00 0.00 0.00 2.90
3122 3509 6.484364 AATTTTTGTCCACCTGTTGAAGAT 57.516 33.333 0.00 0.00 0.00 2.40
3123 3510 5.930837 AATTTTTGTCCACCTGTTGAAGA 57.069 34.783 0.00 0.00 0.00 2.87
3124 3511 6.035975 GTGAAATTTTTGTCCACCTGTTGAAG 59.964 38.462 0.00 0.00 0.00 3.02
3125 3512 5.872070 GTGAAATTTTTGTCCACCTGTTGAA 59.128 36.000 0.00 0.00 0.00 2.69
3126 3513 5.415221 GTGAAATTTTTGTCCACCTGTTGA 58.585 37.500 0.00 0.00 0.00 3.18
3127 3514 4.267452 CGTGAAATTTTTGTCCACCTGTTG 59.733 41.667 0.00 0.00 0.00 3.33
3128 3515 4.081917 ACGTGAAATTTTTGTCCACCTGTT 60.082 37.500 0.00 0.00 0.00 3.16
3129 3516 3.445805 ACGTGAAATTTTTGTCCACCTGT 59.554 39.130 0.00 0.00 0.00 4.00
3130 3517 4.040445 ACGTGAAATTTTTGTCCACCTG 57.960 40.909 0.00 0.00 0.00 4.00
3131 3518 3.067601 GGACGTGAAATTTTTGTCCACCT 59.932 43.478 22.43 5.71 46.55 4.00
3132 3519 3.377439 GGACGTGAAATTTTTGTCCACC 58.623 45.455 22.43 7.08 46.55 4.61
3136 3523 9.673454 ACTATTTTAGGACGTGAAATTTTTGTC 57.327 29.630 0.00 8.89 0.00 3.18
3154 3541 6.833839 ACAATGACGCGCTAAAACTATTTTA 58.166 32.000 5.73 0.00 34.19 1.52
3155 3542 5.695818 ACAATGACGCGCTAAAACTATTTT 58.304 33.333 5.73 0.00 36.67 1.82
3156 3543 5.291293 ACAATGACGCGCTAAAACTATTT 57.709 34.783 5.73 0.00 0.00 1.40
3157 3544 4.939509 ACAATGACGCGCTAAAACTATT 57.060 36.364 5.73 0.00 0.00 1.73
3158 3545 4.025979 GCTACAATGACGCGCTAAAACTAT 60.026 41.667 5.73 0.00 0.00 2.12
3159 3546 3.305094 GCTACAATGACGCGCTAAAACTA 59.695 43.478 5.73 0.00 0.00 2.24
3160 3547 2.093783 GCTACAATGACGCGCTAAAACT 59.906 45.455 5.73 0.00 0.00 2.66
3161 3548 2.159761 TGCTACAATGACGCGCTAAAAC 60.160 45.455 5.73 0.00 0.00 2.43
3162 3549 2.070028 TGCTACAATGACGCGCTAAAA 58.930 42.857 5.73 0.00 0.00 1.52
3163 3550 1.715993 TGCTACAATGACGCGCTAAA 58.284 45.000 5.73 0.00 0.00 1.85
3164 3551 1.934589 ATGCTACAATGACGCGCTAA 58.065 45.000 5.73 0.00 0.00 3.09
3165 3552 1.934589 AATGCTACAATGACGCGCTA 58.065 45.000 5.73 0.00 0.00 4.26
3166 3553 1.086696 AAATGCTACAATGACGCGCT 58.913 45.000 5.73 0.00 0.00 5.92
3167 3554 1.895051 AAAATGCTACAATGACGCGC 58.105 45.000 5.73 0.00 0.00 6.86
3168 3555 4.491942 CACTAAAAATGCTACAATGACGCG 59.508 41.667 3.53 3.53 0.00 6.01
3169 3556 4.262976 GCACTAAAAATGCTACAATGACGC 59.737 41.667 0.00 0.00 40.08 5.19
3170 3557 4.491942 CGCACTAAAAATGCTACAATGACG 59.508 41.667 0.00 0.00 41.10 4.35
3171 3558 4.262976 GCGCACTAAAAATGCTACAATGAC 59.737 41.667 0.30 0.00 41.10 3.06
3172 3559 4.411327 GCGCACTAAAAATGCTACAATGA 58.589 39.130 0.30 0.00 41.10 2.57
3173 3560 3.547468 GGCGCACTAAAAATGCTACAATG 59.453 43.478 10.83 0.00 41.10 2.82
3174 3561 3.730662 CGGCGCACTAAAAATGCTACAAT 60.731 43.478 10.83 0.00 41.10 2.71
3175 3562 2.413502 CGGCGCACTAAAAATGCTACAA 60.414 45.455 10.83 0.00 41.10 2.41
3176 3563 1.129624 CGGCGCACTAAAAATGCTACA 59.870 47.619 10.83 0.00 41.10 2.74
3177 3564 1.531058 CCGGCGCACTAAAAATGCTAC 60.531 52.381 10.83 0.00 41.10 3.58
3178 3565 0.730265 CCGGCGCACTAAAAATGCTA 59.270 50.000 10.83 0.00 41.10 3.49
3179 3566 0.958382 TCCGGCGCACTAAAAATGCT 60.958 50.000 10.83 0.00 41.10 3.79
3180 3567 0.796870 GTCCGGCGCACTAAAAATGC 60.797 55.000 10.83 0.00 39.81 3.56
3181 3568 0.802494 AGTCCGGCGCACTAAAAATG 59.198 50.000 10.83 0.00 0.00 2.32
3182 3569 1.084289 GAGTCCGGCGCACTAAAAAT 58.916 50.000 2.12 0.00 0.00 1.82
3183 3570 0.249953 TGAGTCCGGCGCACTAAAAA 60.250 50.000 2.12 0.00 0.00 1.94
3184 3571 0.249953 TTGAGTCCGGCGCACTAAAA 60.250 50.000 2.12 0.00 0.00 1.52
3185 3572 0.947180 GTTGAGTCCGGCGCACTAAA 60.947 55.000 2.12 0.00 0.00 1.85
3186 3573 1.373748 GTTGAGTCCGGCGCACTAA 60.374 57.895 2.12 0.00 0.00 2.24
3187 3574 1.884075 ATGTTGAGTCCGGCGCACTA 61.884 55.000 2.12 0.00 0.00 2.74
3188 3575 2.731691 AATGTTGAGTCCGGCGCACT 62.732 55.000 1.54 1.54 0.00 4.40
3189 3576 2.325082 AATGTTGAGTCCGGCGCAC 61.325 57.895 10.83 0.00 0.00 5.34
3190 3577 2.031919 AATGTTGAGTCCGGCGCA 59.968 55.556 10.83 0.00 0.00 6.09
3191 3578 2.480555 CAATGTTGAGTCCGGCGC 59.519 61.111 0.00 0.00 0.00 6.53
3192 3579 1.577328 AAGCAATGTTGAGTCCGGCG 61.577 55.000 0.00 0.00 0.00 6.46
3193 3580 0.598065 AAAGCAATGTTGAGTCCGGC 59.402 50.000 0.00 0.00 0.00 6.13
3194 3581 2.159517 GCTAAAGCAATGTTGAGTCCGG 60.160 50.000 0.00 0.00 41.59 5.14
3195 3582 3.122937 GCTAAAGCAATGTTGAGTCCG 57.877 47.619 0.00 0.00 41.59 4.79
3209 3596 5.759763 ACTCATTTTTGGGCTTTTGCTAAAG 59.240 36.000 15.20 15.20 46.54 1.85
3210 3597 5.526846 CACTCATTTTTGGGCTTTTGCTAAA 59.473 36.000 0.00 0.00 46.54 1.85
3211 3598 5.055812 CACTCATTTTTGGGCTTTTGCTAA 58.944 37.500 0.00 0.00 46.54 3.09
3212 3599 4.630111 CACTCATTTTTGGGCTTTTGCTA 58.370 39.130 0.00 0.00 46.54 3.49
3213 3600 3.469739 CACTCATTTTTGGGCTTTTGCT 58.530 40.909 0.00 0.00 46.54 3.91
3214 3601 2.031769 GCACTCATTTTTGGGCTTTTGC 60.032 45.455 0.00 0.00 46.64 3.68
3215 3602 3.204526 TGCACTCATTTTTGGGCTTTTG 58.795 40.909 0.00 0.00 0.00 2.44
3216 3603 3.557228 TGCACTCATTTTTGGGCTTTT 57.443 38.095 0.00 0.00 0.00 2.27
3217 3604 3.557228 TTGCACTCATTTTTGGGCTTT 57.443 38.095 0.00 0.00 0.00 3.51
3218 3605 3.557228 TTTGCACTCATTTTTGGGCTT 57.443 38.095 0.00 0.00 0.00 4.35
3219 3606 3.557228 TTTTGCACTCATTTTTGGGCT 57.443 38.095 0.00 0.00 0.00 5.19
3240 3627 8.751335 CGCTTCACAATTTACACTGTAATTTTT 58.249 29.630 2.41 0.00 0.00 1.94
3241 3628 7.096230 GCGCTTCACAATTTACACTGTAATTTT 60.096 33.333 0.00 0.00 0.00 1.82
3242 3629 6.362283 GCGCTTCACAATTTACACTGTAATTT 59.638 34.615 0.00 3.35 0.00 1.82
3243 3630 5.856455 GCGCTTCACAATTTACACTGTAATT 59.144 36.000 0.00 0.00 0.00 1.40
3244 3631 5.390613 GCGCTTCACAATTTACACTGTAAT 58.609 37.500 0.00 0.00 0.00 1.89
3245 3632 4.609559 CGCGCTTCACAATTTACACTGTAA 60.610 41.667 5.56 0.00 0.00 2.41
3246 3633 3.120820 CGCGCTTCACAATTTACACTGTA 60.121 43.478 5.56 0.00 0.00 2.74
3247 3634 2.349438 CGCGCTTCACAATTTACACTGT 60.349 45.455 5.56 0.00 0.00 3.55
3248 3635 2.233355 CGCGCTTCACAATTTACACTG 58.767 47.619 5.56 0.00 0.00 3.66
3249 3636 1.871039 ACGCGCTTCACAATTTACACT 59.129 42.857 5.73 0.00 0.00 3.55
3250 3637 2.230864 GACGCGCTTCACAATTTACAC 58.769 47.619 5.73 0.00 0.00 2.90
3251 3638 1.195900 GGACGCGCTTCACAATTTACA 59.804 47.619 16.33 0.00 0.00 2.41
3252 3639 1.195900 TGGACGCGCTTCACAATTTAC 59.804 47.619 16.33 0.00 0.00 2.01
3253 3640 1.514003 TGGACGCGCTTCACAATTTA 58.486 45.000 16.33 0.00 0.00 1.40
3254 3641 0.665835 TTGGACGCGCTTCACAATTT 59.334 45.000 16.33 0.00 0.00 1.82
3255 3642 0.881118 ATTGGACGCGCTTCACAATT 59.119 45.000 16.33 5.57 0.00 2.32
3256 3643 0.447801 GATTGGACGCGCTTCACAAT 59.552 50.000 21.74 21.74 34.73 2.71
3257 3644 1.573829 GGATTGGACGCGCTTCACAA 61.574 55.000 16.33 16.20 0.00 3.33
3258 3645 2.032634 GGATTGGACGCGCTTCACA 61.033 57.895 16.33 8.44 0.00 3.58
3259 3646 2.785258 GGATTGGACGCGCTTCAC 59.215 61.111 16.33 5.88 0.00 3.18
3260 3647 2.813474 CGGATTGGACGCGCTTCA 60.813 61.111 16.33 3.13 0.00 3.02
3261 3648 3.564027 CCGGATTGGACGCGCTTC 61.564 66.667 5.73 5.32 42.00 3.86
3262 3649 4.077184 TCCGGATTGGACGCGCTT 62.077 61.111 5.73 0.00 43.74 4.68
3263 3650 4.514577 CTCCGGATTGGACGCGCT 62.515 66.667 3.57 0.00 43.74 5.92
3267 3654 2.813226 TTTGGGCTCCGGATTGGACG 62.813 60.000 3.57 0.00 43.74 4.79
3268 3655 0.610785 TTTTGGGCTCCGGATTGGAC 60.611 55.000 3.57 0.00 43.74 4.02
3270 3657 2.065899 TATTTTGGGCTCCGGATTGG 57.934 50.000 3.57 0.00 40.09 3.16
3271 3658 4.216257 CAGTATATTTTGGGCTCCGGATTG 59.784 45.833 3.57 0.00 0.00 2.67
3272 3659 4.398319 CAGTATATTTTGGGCTCCGGATT 58.602 43.478 3.57 0.00 0.00 3.01
3273 3660 3.810743 GCAGTATATTTTGGGCTCCGGAT 60.811 47.826 3.57 0.00 0.00 4.18
3274 3661 2.486548 GCAGTATATTTTGGGCTCCGGA 60.487 50.000 2.93 2.93 0.00 5.14
3275 3662 1.880027 GCAGTATATTTTGGGCTCCGG 59.120 52.381 0.00 0.00 0.00 5.14
3276 3663 2.290641 GTGCAGTATATTTTGGGCTCCG 59.709 50.000 0.00 0.00 0.00 4.63
3277 3664 3.066760 GTGTGCAGTATATTTTGGGCTCC 59.933 47.826 0.00 0.00 0.00 4.70
3278 3665 3.242739 CGTGTGCAGTATATTTTGGGCTC 60.243 47.826 0.00 0.00 0.00 4.70
3279 3666 2.682856 CGTGTGCAGTATATTTTGGGCT 59.317 45.455 0.00 0.00 0.00 5.19
3280 3667 2.680841 TCGTGTGCAGTATATTTTGGGC 59.319 45.455 0.00 0.00 0.00 5.36
3281 3668 5.334105 GCTATCGTGTGCAGTATATTTTGGG 60.334 44.000 0.00 0.00 0.00 4.12
3282 3669 5.612492 CGCTATCGTGTGCAGTATATTTTGG 60.612 44.000 0.00 0.00 0.00 3.28
3283 3670 5.365942 CGCTATCGTGTGCAGTATATTTTG 58.634 41.667 0.00 0.00 0.00 2.44
3284 3671 5.576337 CGCTATCGTGTGCAGTATATTTT 57.424 39.130 0.00 0.00 0.00 1.82
3314 3701 1.807242 AAAAGTTTTTGAGCGCGCGC 61.807 50.000 45.10 45.10 42.33 6.86
3315 3702 1.378807 CTAAAAGTTTTTGAGCGCGCG 59.621 47.619 28.44 28.44 0.00 6.86
3316 3703 1.122501 GCTAAAAGTTTTTGAGCGCGC 59.877 47.619 26.66 26.66 0.00 6.86
3317 3704 1.378807 CGCTAAAAGTTTTTGAGCGCG 59.621 47.619 24.61 17.61 40.07 6.86
3319 3706 2.650608 AGCGCTAAAAGTTTTTGAGCG 58.349 42.857 28.74 28.74 43.98 5.03
3320 3707 4.533222 TGTAGCGCTAAAAGTTTTTGAGC 58.467 39.130 20.73 23.40 0.00 4.26
3321 3708 4.613031 GCTGTAGCGCTAAAAGTTTTTGAG 59.387 41.667 20.73 10.77 0.00 3.02
3322 3709 4.533222 GCTGTAGCGCTAAAAGTTTTTGA 58.467 39.130 20.73 0.00 0.00 2.69
3323 3710 4.868581 GCTGTAGCGCTAAAAGTTTTTG 57.131 40.909 20.73 5.79 0.00 2.44
3343 3730 1.633852 CGAACAGCTCCAGCAGAAGC 61.634 60.000 0.48 0.00 45.16 3.86
3344 3731 1.018226 CCGAACAGCTCCAGCAGAAG 61.018 60.000 0.48 0.00 45.16 2.85
3345 3732 1.004560 CCGAACAGCTCCAGCAGAA 60.005 57.895 0.48 0.00 45.16 3.02
3346 3733 2.659016 CCGAACAGCTCCAGCAGA 59.341 61.111 0.48 0.00 45.16 4.26
3347 3734 3.123620 GCCGAACAGCTCCAGCAG 61.124 66.667 0.48 0.00 45.16 4.24
3353 3740 4.742201 TGAGGCGCCGAACAGCTC 62.742 66.667 23.20 12.00 0.00 4.09
3354 3741 3.825160 TTTGAGGCGCCGAACAGCT 62.825 57.895 23.20 0.00 0.00 4.24
3355 3742 2.400896 TTTTTGAGGCGCCGAACAGC 62.401 55.000 23.20 8.11 0.00 4.40
3356 3743 1.652012 TTTTTGAGGCGCCGAACAG 59.348 52.632 23.20 0.00 0.00 3.16
3357 3744 3.829048 TTTTTGAGGCGCCGAACA 58.171 50.000 23.20 19.58 0.00 3.18
3380 3767 0.320421 AGAGCTCCGCGCACTAAAAA 60.320 50.000 10.93 0.00 42.61 1.94
3381 3768 0.320421 AAGAGCTCCGCGCACTAAAA 60.320 50.000 10.93 0.00 38.68 1.52
3382 3769 0.320421 AAAGAGCTCCGCGCACTAAA 60.320 50.000 10.93 0.00 38.68 1.85
3383 3770 0.320421 AAAAGAGCTCCGCGCACTAA 60.320 50.000 10.93 0.00 38.68 2.24
3384 3771 0.320421 AAAAAGAGCTCCGCGCACTA 60.320 50.000 10.93 0.00 38.68 2.74
3385 3772 1.598130 AAAAAGAGCTCCGCGCACT 60.598 52.632 10.93 0.00 41.53 4.40
3386 3773 1.441016 CAAAAAGAGCTCCGCGCAC 60.441 57.895 10.93 0.00 42.61 5.34
3387 3774 1.163420 TTCAAAAAGAGCTCCGCGCA 61.163 50.000 10.93 0.00 42.61 6.09
3388 3775 0.726118 GTTCAAAAAGAGCTCCGCGC 60.726 55.000 10.93 0.00 39.57 6.86
3389 3776 0.586319 TGTTCAAAAAGAGCTCCGCG 59.414 50.000 10.93 0.00 0.00 6.46
3390 3777 1.335051 GGTGTTCAAAAAGAGCTCCGC 60.335 52.381 10.93 0.00 32.64 5.54
3391 3778 2.031682 CAGGTGTTCAAAAAGAGCTCCG 60.032 50.000 10.93 0.00 43.40 4.63
3392 3779 2.952310 ACAGGTGTTCAAAAAGAGCTCC 59.048 45.455 10.93 0.00 40.26 4.70
3393 3780 4.354587 CAACAGGTGTTCAAAAAGAGCTC 58.645 43.478 5.27 5.27 34.57 4.09
3394 3781 3.131046 CCAACAGGTGTTCAAAAAGAGCT 59.869 43.478 0.00 0.00 36.99 4.09
3395 3782 3.130340 TCCAACAGGTGTTCAAAAAGAGC 59.870 43.478 0.00 0.00 35.83 4.09
3396 3783 4.640201 TCTCCAACAGGTGTTCAAAAAGAG 59.360 41.667 0.00 0.00 35.83 2.85
3397 3784 4.594970 TCTCCAACAGGTGTTCAAAAAGA 58.405 39.130 0.00 0.00 35.83 2.52
3398 3785 4.981806 TCTCCAACAGGTGTTCAAAAAG 57.018 40.909 0.00 0.00 35.83 2.27
3399 3786 4.441356 GCATCTCCAACAGGTGTTCAAAAA 60.441 41.667 0.00 0.00 35.35 1.94
3400 3787 3.068024 GCATCTCCAACAGGTGTTCAAAA 59.932 43.478 0.00 0.00 35.35 2.44
3401 3788 2.622942 GCATCTCCAACAGGTGTTCAAA 59.377 45.455 0.00 0.00 35.35 2.69
3402 3789 2.158623 AGCATCTCCAACAGGTGTTCAA 60.159 45.455 0.00 0.00 35.35 2.69
3403 3790 1.421268 AGCATCTCCAACAGGTGTTCA 59.579 47.619 0.00 0.00 35.35 3.18
3404 3791 2.079925 GAGCATCTCCAACAGGTGTTC 58.920 52.381 0.00 0.00 36.42 3.18
3405 3792 2.191128 GAGCATCTCCAACAGGTGTT 57.809 50.000 0.00 0.00 35.35 3.32
3406 3793 3.944476 GAGCATCTCCAACAGGTGT 57.056 52.632 0.00 0.00 35.35 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.