Multiple sequence alignment - TraesCS7B01G165000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G165000 chr7B 100.000 2480 0 0 1 2480 228118442 228115963 0.000000e+00 4580
1 TraesCS7B01G165000 chr7B 77.415 797 115 22 100 875 171003988 171004740 4.930000e-112 414
2 TraesCS7B01G165000 chr6D 96.166 965 37 0 1516 2480 106838924 106837960 0.000000e+00 1578
3 TraesCS7B01G165000 chr6D 92.793 888 38 6 4 878 106839793 106838919 0.000000e+00 1262
4 TraesCS7B01G165000 chr6D 87.614 767 77 9 1715 2477 186348802 186349554 0.000000e+00 874
5 TraesCS7B01G165000 chr1D 95.327 856 37 3 1626 2480 283043016 283042163 0.000000e+00 1356
6 TraesCS7B01G165000 chr1D 93.407 819 33 5 4 808 103692732 103691921 0.000000e+00 1194
7 TraesCS7B01G165000 chr1D 96.073 713 24 4 1769 2480 103684338 103683629 0.000000e+00 1158
8 TraesCS7B01G165000 chr1D 89.157 913 36 11 4 878 283044295 283043408 0.000000e+00 1079
9 TraesCS7B01G165000 chr1D 96.565 262 9 0 1516 1777 103689046 103688785 3.790000e-118 435
10 TraesCS7B01G165000 chr1D 99.130 115 1 0 1516 1630 283043413 283043299 8.990000e-50 207
11 TraesCS7B01G165000 chr1D 95.946 74 2 1 805 878 103689113 103689041 4.330000e-23 119
12 TraesCS7B01G165000 chr7A 92.576 889 50 6 1 878 466947519 466946636 0.000000e+00 1262
13 TraesCS7B01G165000 chr7A 93.878 833 29 8 1651 2480 466946124 466945311 0.000000e+00 1236
14 TraesCS7B01G165000 chr7A 88.739 222 24 1 1291 1512 123204743 123204523 1.130000e-68 270
15 TraesCS7B01G165000 chr7A 89.655 145 4 3 1516 1649 466946641 466946497 9.120000e-40 174
16 TraesCS7B01G165000 chr1A 92.238 889 50 7 1 878 247808621 247807741 0.000000e+00 1242
17 TraesCS7B01G165000 chr1A 91.470 891 55 10 1 878 248032194 248033076 0.000000e+00 1205
18 TraesCS7B01G165000 chr1A 93.590 624 34 5 1651 2272 247807236 247806617 0.000000e+00 926
19 TraesCS7B01G165000 chr1A 94.776 134 6 1 1516 1648 247807746 247807613 8.990000e-50 207
20 TraesCS7B01G165000 chr1A 94.776 134 6 1 1516 1648 248033071 248033204 8.990000e-50 207
21 TraesCS7B01G165000 chr3D 88.021 768 85 6 1715 2480 338739909 338739147 0.000000e+00 902
22 TraesCS7B01G165000 chr1B 87.630 768 87 8 1715 2477 276010727 276011491 0.000000e+00 885
23 TraesCS7B01G165000 chr1B 97.078 308 5 3 1206 1512 164420498 164420802 1.320000e-142 516
24 TraesCS7B01G165000 chr2B 86.053 760 101 5 1717 2473 291392957 291393714 0.000000e+00 811
25 TraesCS7B01G165000 chr7D 95.267 486 23 0 1027 1512 383903563 383903078 0.000000e+00 771
26 TraesCS7B01G165000 chr2D 79.563 915 111 30 1 879 195120279 195121153 3.550000e-163 584
27 TraesCS7B01G165000 chr6B 78.451 891 130 30 10 875 407178574 407177721 2.180000e-145 525
28 TraesCS7B01G165000 chr6B 94.505 182 10 0 1330 1511 317546520 317546701 5.220000e-72 281
29 TraesCS7B01G165000 chr4B 97.464 276 7 0 1236 1511 469008997 469008722 2.890000e-129 472


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G165000 chr7B 228115963 228118442 2479 True 4580.000000 4580 100.000000 1 2480 1 chr7B.!!$R1 2479
1 TraesCS7B01G165000 chr7B 171003988 171004740 752 False 414.000000 414 77.415000 100 875 1 chr7B.!!$F1 775
2 TraesCS7B01G165000 chr6D 106837960 106839793 1833 True 1420.000000 1578 94.479500 4 2480 2 chr6D.!!$R1 2476
3 TraesCS7B01G165000 chr6D 186348802 186349554 752 False 874.000000 874 87.614000 1715 2477 1 chr6D.!!$F1 762
4 TraesCS7B01G165000 chr1D 103683629 103684338 709 True 1158.000000 1158 96.073000 1769 2480 1 chr1D.!!$R1 711
5 TraesCS7B01G165000 chr1D 283042163 283044295 2132 True 880.666667 1356 94.538000 4 2480 3 chr1D.!!$R3 2476
6 TraesCS7B01G165000 chr1D 103688785 103692732 3947 True 582.666667 1194 95.306000 4 1777 3 chr1D.!!$R2 1773
7 TraesCS7B01G165000 chr7A 466945311 466947519 2208 True 890.666667 1262 92.036333 1 2480 3 chr7A.!!$R2 2479
8 TraesCS7B01G165000 chr1A 247806617 247808621 2004 True 791.666667 1242 93.534667 1 2272 3 chr1A.!!$R1 2271
9 TraesCS7B01G165000 chr1A 248032194 248033204 1010 False 706.000000 1205 93.123000 1 1648 2 chr1A.!!$F1 1647
10 TraesCS7B01G165000 chr3D 338739147 338739909 762 True 902.000000 902 88.021000 1715 2480 1 chr3D.!!$R1 765
11 TraesCS7B01G165000 chr1B 276010727 276011491 764 False 885.000000 885 87.630000 1715 2477 1 chr1B.!!$F2 762
12 TraesCS7B01G165000 chr2B 291392957 291393714 757 False 811.000000 811 86.053000 1717 2473 1 chr2B.!!$F1 756
13 TraesCS7B01G165000 chr2D 195120279 195121153 874 False 584.000000 584 79.563000 1 879 1 chr2D.!!$F1 878
14 TraesCS7B01G165000 chr6B 407177721 407178574 853 True 525.000000 525 78.451000 10 875 1 chr6B.!!$R1 865

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
912 3801 0.106335 CTGCTCATGCTAGGTCCTGG 59.894 60.0 0.0 0.0 40.48 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1873 5433 0.596859 GCTAACCCTACATCGCCGTC 60.597 60.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.753438 TCAAATATAGGTACTTTGCGAGCAG 59.247 40.000 0.00 0.00 41.75 4.24
130 131 8.055609 TGCATTATGTACGAACTTTTGTTTTG 57.944 30.769 0.00 0.00 43.66 2.44
295 300 6.949352 AGATTGGCATAGTTTATTGAGTGG 57.051 37.500 0.00 0.00 0.00 4.00
508 513 7.658179 AATACGATAGAACCAATGCTATGTG 57.342 36.000 0.00 0.00 41.38 3.21
695 723 8.454106 GCCTAAAAGCTATACACATCCATAATG 58.546 37.037 0.00 0.00 41.48 1.90
803 878 4.462508 TGCTCTGAAAGTATCCACTCTG 57.537 45.455 0.00 0.00 32.29 3.35
856 3745 2.933906 ACGTTATGAAAGGCCATACGTG 59.066 45.455 5.01 0.00 36.46 4.49
857 3746 2.286184 CGTTATGAAAGGCCATACGTGC 60.286 50.000 5.01 0.00 0.00 5.34
872 3761 3.253061 TGCGATGGGTCCCACCAA 61.253 61.111 14.57 0.00 45.13 3.67
873 3762 2.275418 GCGATGGGTCCCACCAAT 59.725 61.111 14.57 0.00 45.13 3.16
874 3763 1.275421 TGCGATGGGTCCCACCAATA 61.275 55.000 14.57 0.00 45.13 1.90
875 3764 0.110486 GCGATGGGTCCCACCAATAT 59.890 55.000 14.57 0.00 45.13 1.28
876 3765 1.882352 GCGATGGGTCCCACCAATATC 60.882 57.143 14.57 4.66 45.13 1.63
877 3766 1.699634 CGATGGGTCCCACCAATATCT 59.300 52.381 14.57 0.00 45.13 1.98
878 3767 2.289694 CGATGGGTCCCACCAATATCTC 60.290 54.545 14.57 3.03 45.13 2.75
879 3768 2.278657 TGGGTCCCACCAATATCTCA 57.721 50.000 6.47 0.00 41.02 3.27
880 3769 2.126882 TGGGTCCCACCAATATCTCAG 58.873 52.381 6.47 0.00 41.02 3.35
881 3770 2.127708 GGGTCCCACCAATATCTCAGT 58.872 52.381 1.78 0.00 41.02 3.41
882 3771 2.509964 GGGTCCCACCAATATCTCAGTT 59.490 50.000 1.78 0.00 41.02 3.16
883 3772 3.545703 GGTCCCACCAATATCTCAGTTG 58.454 50.000 0.00 0.00 38.42 3.16
884 3773 3.199946 GGTCCCACCAATATCTCAGTTGA 59.800 47.826 0.00 0.00 38.42 3.18
885 3774 4.324254 GGTCCCACCAATATCTCAGTTGAA 60.324 45.833 0.00 0.00 38.42 2.69
886 3775 4.878397 GTCCCACCAATATCTCAGTTGAAG 59.122 45.833 0.00 0.00 0.00 3.02
887 3776 4.536090 TCCCACCAATATCTCAGTTGAAGT 59.464 41.667 0.00 0.00 0.00 3.01
888 3777 5.014123 TCCCACCAATATCTCAGTTGAAGTT 59.986 40.000 0.00 0.00 0.00 2.66
889 3778 6.214615 TCCCACCAATATCTCAGTTGAAGTTA 59.785 38.462 0.00 0.00 0.00 2.24
890 3779 6.316390 CCCACCAATATCTCAGTTGAAGTTAC 59.684 42.308 0.00 0.00 0.00 2.50
891 3780 7.106239 CCACCAATATCTCAGTTGAAGTTACT 58.894 38.462 0.00 0.00 0.00 2.24
892 3781 7.065085 CCACCAATATCTCAGTTGAAGTTACTG 59.935 40.741 0.05 0.05 43.41 2.74
893 3782 6.595716 ACCAATATCTCAGTTGAAGTTACTGC 59.404 38.462 1.50 0.00 42.12 4.40
894 3783 6.820656 CCAATATCTCAGTTGAAGTTACTGCT 59.179 38.462 1.50 0.00 42.12 4.24
895 3784 7.201591 CCAATATCTCAGTTGAAGTTACTGCTG 60.202 40.741 1.50 0.00 42.12 4.41
896 3785 3.393800 TCTCAGTTGAAGTTACTGCTGC 58.606 45.455 1.50 0.00 42.12 5.25
897 3786 3.070159 TCTCAGTTGAAGTTACTGCTGCT 59.930 43.478 0.00 0.00 42.12 4.24
898 3787 3.393800 TCAGTTGAAGTTACTGCTGCTC 58.606 45.455 0.00 0.00 42.12 4.26
899 3788 3.133691 CAGTTGAAGTTACTGCTGCTCA 58.866 45.455 0.00 0.00 36.88 4.26
900 3789 3.750130 CAGTTGAAGTTACTGCTGCTCAT 59.250 43.478 0.00 0.00 36.88 2.90
901 3790 3.750130 AGTTGAAGTTACTGCTGCTCATG 59.250 43.478 0.00 0.00 0.00 3.07
902 3791 2.079158 TGAAGTTACTGCTGCTCATGC 58.921 47.619 0.00 0.00 40.20 4.06
903 3792 2.289882 TGAAGTTACTGCTGCTCATGCT 60.290 45.455 0.00 0.00 40.48 3.79
904 3793 3.055891 TGAAGTTACTGCTGCTCATGCTA 60.056 43.478 0.00 0.00 40.48 3.49
905 3794 3.176552 AGTTACTGCTGCTCATGCTAG 57.823 47.619 0.00 0.00 40.48 3.42
906 3795 2.158986 AGTTACTGCTGCTCATGCTAGG 60.159 50.000 0.00 0.00 40.48 3.02
907 3796 1.489481 TACTGCTGCTCATGCTAGGT 58.511 50.000 0.00 0.00 40.48 3.08
908 3797 0.177604 ACTGCTGCTCATGCTAGGTC 59.822 55.000 0.00 0.00 40.48 3.85
909 3798 0.532417 CTGCTGCTCATGCTAGGTCC 60.532 60.000 0.00 0.00 40.48 4.46
910 3799 0.979709 TGCTGCTCATGCTAGGTCCT 60.980 55.000 0.00 0.00 40.48 3.85
911 3800 0.532417 GCTGCTCATGCTAGGTCCTG 60.532 60.000 0.00 0.00 40.48 3.86
912 3801 0.106335 CTGCTCATGCTAGGTCCTGG 59.894 60.000 0.00 0.00 40.48 4.45
913 3802 1.340399 TGCTCATGCTAGGTCCTGGG 61.340 60.000 0.00 0.00 40.48 4.45
914 3803 1.449353 CTCATGCTAGGTCCTGGGC 59.551 63.158 0.00 6.68 0.00 5.36
915 3804 2.109799 CATGCTAGGTCCTGGGCG 59.890 66.667 0.00 0.00 0.00 6.13
916 3805 2.041922 ATGCTAGGTCCTGGGCGA 60.042 61.111 0.00 0.00 0.00 5.54
917 3806 1.460305 ATGCTAGGTCCTGGGCGAT 60.460 57.895 0.00 0.74 0.00 4.58
918 3807 1.056700 ATGCTAGGTCCTGGGCGATT 61.057 55.000 0.00 0.00 0.00 3.34
919 3808 1.227674 GCTAGGTCCTGGGCGATTG 60.228 63.158 0.00 0.00 0.00 2.67
920 3809 1.686325 GCTAGGTCCTGGGCGATTGA 61.686 60.000 0.00 0.00 0.00 2.57
921 3810 0.830648 CTAGGTCCTGGGCGATTGAA 59.169 55.000 0.00 0.00 0.00 2.69
922 3811 1.417890 CTAGGTCCTGGGCGATTGAAT 59.582 52.381 0.00 0.00 0.00 2.57
923 3812 0.181350 AGGTCCTGGGCGATTGAATC 59.819 55.000 0.00 0.00 0.00 2.52
924 3813 0.107214 GGTCCTGGGCGATTGAATCA 60.107 55.000 5.95 0.00 0.00 2.57
925 3814 1.681780 GGTCCTGGGCGATTGAATCAA 60.682 52.381 5.95 0.00 0.00 2.57
926 3815 2.301346 GTCCTGGGCGATTGAATCAAT 58.699 47.619 8.39 8.39 36.72 2.57
927 3816 2.033801 GTCCTGGGCGATTGAATCAATG 59.966 50.000 13.82 7.06 33.90 2.82
928 3817 1.269413 CCTGGGCGATTGAATCAATGC 60.269 52.381 13.82 15.50 33.90 3.56
929 3818 1.406180 CTGGGCGATTGAATCAATGCA 59.594 47.619 13.82 0.00 33.90 3.96
930 3819 1.823610 TGGGCGATTGAATCAATGCAA 59.176 42.857 13.82 6.97 33.90 4.08
931 3820 2.431419 TGGGCGATTGAATCAATGCAAT 59.569 40.909 13.82 0.00 33.90 3.56
932 3821 3.118702 TGGGCGATTGAATCAATGCAATT 60.119 39.130 13.82 0.00 33.90 2.32
933 3822 3.872771 GGGCGATTGAATCAATGCAATTT 59.127 39.130 13.82 0.00 33.90 1.82
934 3823 4.333372 GGGCGATTGAATCAATGCAATTTT 59.667 37.500 13.82 0.00 33.90 1.82
935 3824 5.163733 GGGCGATTGAATCAATGCAATTTTT 60.164 36.000 13.82 0.00 33.90 1.94
963 3852 4.694233 CAGACAGTGCCGGCTGCT 62.694 66.667 29.70 22.24 42.00 4.24
964 3853 4.694233 AGACAGTGCCGGCTGCTG 62.694 66.667 33.94 33.94 42.00 4.41
980 3869 4.948257 TGCACAGCCTAGCAGATG 57.052 55.556 0.00 0.00 35.51 2.90
981 3870 1.222661 TGCACAGCCTAGCAGATGG 59.777 57.895 0.00 0.00 35.51 3.51
982 3871 1.266867 TGCACAGCCTAGCAGATGGA 61.267 55.000 0.00 0.00 35.51 3.41
983 3872 0.813210 GCACAGCCTAGCAGATGGAC 60.813 60.000 0.00 0.00 0.00 4.02
984 3873 0.538584 CACAGCCTAGCAGATGGACA 59.461 55.000 0.00 0.00 0.00 4.02
985 3874 1.065926 CACAGCCTAGCAGATGGACAA 60.066 52.381 0.00 0.00 0.00 3.18
986 3875 1.209019 ACAGCCTAGCAGATGGACAAG 59.791 52.381 0.00 0.00 0.00 3.16
987 3876 1.483827 CAGCCTAGCAGATGGACAAGA 59.516 52.381 0.00 0.00 0.00 3.02
988 3877 1.484240 AGCCTAGCAGATGGACAAGAC 59.516 52.381 0.00 0.00 0.00 3.01
989 3878 1.474143 GCCTAGCAGATGGACAAGACC 60.474 57.143 0.00 0.00 0.00 3.85
990 3879 2.114616 CCTAGCAGATGGACAAGACCT 58.885 52.381 0.00 0.00 0.00 3.85
991 3880 2.158986 CCTAGCAGATGGACAAGACCTG 60.159 54.545 0.00 0.00 0.00 4.00
992 3881 1.649321 AGCAGATGGACAAGACCTGA 58.351 50.000 0.00 0.00 0.00 3.86
993 3882 2.194859 AGCAGATGGACAAGACCTGAT 58.805 47.619 0.00 0.00 0.00 2.90
994 3883 2.093075 AGCAGATGGACAAGACCTGATG 60.093 50.000 0.00 0.00 0.00 3.07
995 3884 2.093288 GCAGATGGACAAGACCTGATGA 60.093 50.000 0.00 0.00 0.00 2.92
996 3885 3.794717 CAGATGGACAAGACCTGATGAG 58.205 50.000 0.00 0.00 0.00 2.90
997 3886 2.770802 AGATGGACAAGACCTGATGAGG 59.229 50.000 0.00 0.00 46.21 3.86
998 3887 2.325661 TGGACAAGACCTGATGAGGA 57.674 50.000 4.75 0.00 42.93 3.71
999 3888 1.902508 TGGACAAGACCTGATGAGGAC 59.097 52.381 4.75 0.00 42.93 3.85
1000 3889 1.902508 GGACAAGACCTGATGAGGACA 59.097 52.381 4.75 0.00 42.93 4.02
1001 3890 2.503356 GGACAAGACCTGATGAGGACAT 59.497 50.000 4.75 0.00 42.93 3.06
1002 3891 3.529533 GACAAGACCTGATGAGGACATG 58.470 50.000 4.75 4.65 42.93 3.21
1003 3892 2.909006 ACAAGACCTGATGAGGACATGT 59.091 45.455 4.75 5.39 42.93 3.21
1004 3893 3.328931 ACAAGACCTGATGAGGACATGTT 59.671 43.478 4.75 0.00 41.26 2.71
1005 3894 3.623906 AGACCTGATGAGGACATGTTG 57.376 47.619 4.75 0.00 42.93 3.33
1006 3895 3.176411 AGACCTGATGAGGACATGTTGA 58.824 45.455 4.75 0.00 42.93 3.18
1007 3896 3.584406 AGACCTGATGAGGACATGTTGAA 59.416 43.478 4.75 0.00 42.93 2.69
1008 3897 4.042062 AGACCTGATGAGGACATGTTGAAA 59.958 41.667 4.75 0.00 42.93 2.69
1009 3898 4.728772 ACCTGATGAGGACATGTTGAAAA 58.271 39.130 4.75 0.00 42.93 2.29
1010 3899 5.327732 ACCTGATGAGGACATGTTGAAAAT 58.672 37.500 4.75 0.00 42.93 1.82
1011 3900 5.416952 ACCTGATGAGGACATGTTGAAAATC 59.583 40.000 4.75 1.46 42.93 2.17
1012 3901 5.416639 CCTGATGAGGACATGTTGAAAATCA 59.583 40.000 0.00 5.98 42.93 2.57
1013 3902 6.071784 CCTGATGAGGACATGTTGAAAATCAA 60.072 38.462 0.00 0.00 42.93 2.57
1024 3913 4.717233 TTGAAAATCAACATCGATGGGG 57.283 40.909 28.09 19.13 30.26 4.96
1025 3914 2.426738 TGAAAATCAACATCGATGGGGC 59.573 45.455 28.09 9.63 0.00 5.80
1026 3915 1.024271 AAATCAACATCGATGGGGCG 58.976 50.000 28.09 13.59 0.00 6.13
1027 3916 0.107214 AATCAACATCGATGGGGCGT 60.107 50.000 28.09 8.66 0.00 5.68
1028 3917 0.107214 ATCAACATCGATGGGGCGTT 60.107 50.000 28.09 11.05 0.00 4.84
1029 3918 0.322098 TCAACATCGATGGGGCGTTT 60.322 50.000 28.09 10.33 0.00 3.60
1030 3919 0.098728 CAACATCGATGGGGCGTTTC 59.901 55.000 28.09 0.00 0.00 2.78
1031 3920 0.322098 AACATCGATGGGGCGTTTCA 60.322 50.000 28.09 0.00 0.00 2.69
1032 3921 0.107214 ACATCGATGGGGCGTTTCAT 60.107 50.000 28.09 1.12 0.00 2.57
1033 3922 1.140052 ACATCGATGGGGCGTTTCATA 59.860 47.619 28.09 0.00 0.00 2.15
1034 3923 1.800586 CATCGATGGGGCGTTTCATAG 59.199 52.381 17.96 0.00 0.00 2.23
1035 3924 0.828022 TCGATGGGGCGTTTCATAGT 59.172 50.000 0.00 0.00 0.00 2.12
1036 3925 2.033372 TCGATGGGGCGTTTCATAGTA 58.967 47.619 0.00 0.00 0.00 1.82
1037 3926 2.132762 CGATGGGGCGTTTCATAGTAC 58.867 52.381 0.00 0.00 0.00 2.73
1038 3927 2.490991 GATGGGGCGTTTCATAGTACC 58.509 52.381 0.00 0.00 0.00 3.34
1039 3928 1.277579 TGGGGCGTTTCATAGTACCA 58.722 50.000 0.00 0.00 0.00 3.25
1040 3929 1.208535 TGGGGCGTTTCATAGTACCAG 59.791 52.381 0.00 0.00 0.00 4.00
1041 3930 1.208776 GGGGCGTTTCATAGTACCAGT 59.791 52.381 0.00 0.00 0.00 4.00
1042 3931 2.277084 GGGCGTTTCATAGTACCAGTG 58.723 52.381 0.00 0.00 0.00 3.66
1043 3932 2.277084 GGCGTTTCATAGTACCAGTGG 58.723 52.381 7.91 7.91 0.00 4.00
1044 3933 2.277084 GCGTTTCATAGTACCAGTGGG 58.723 52.381 15.21 0.00 41.29 4.61
1045 3934 2.093869 GCGTTTCATAGTACCAGTGGGA 60.094 50.000 15.21 0.19 38.05 4.37
1046 3935 3.782046 CGTTTCATAGTACCAGTGGGAG 58.218 50.000 15.21 0.00 38.05 4.30
1047 3936 3.194968 CGTTTCATAGTACCAGTGGGAGT 59.805 47.826 15.21 11.09 38.05 3.85
1048 3937 4.504858 GTTTCATAGTACCAGTGGGAGTG 58.495 47.826 12.49 3.54 38.05 3.51
1049 3938 2.747177 TCATAGTACCAGTGGGAGTGG 58.253 52.381 12.49 4.24 44.34 4.00
1050 3939 1.762957 CATAGTACCAGTGGGAGTGGG 59.237 57.143 12.49 0.00 43.06 4.61
1051 3940 0.042131 TAGTACCAGTGGGAGTGGGG 59.958 60.000 12.49 0.00 43.06 4.96
1052 3941 2.124085 TACCAGTGGGAGTGGGGG 59.876 66.667 15.21 0.00 43.06 5.40
1053 3942 2.808536 TACCAGTGGGAGTGGGGGT 61.809 63.158 15.21 0.00 43.06 4.95
1054 3943 2.349630 TACCAGTGGGAGTGGGGGTT 62.350 60.000 15.21 0.00 43.06 4.11
1055 3944 2.436109 CAGTGGGAGTGGGGGTTG 59.564 66.667 0.00 0.00 0.00 3.77
1056 3945 2.858974 AGTGGGAGTGGGGGTTGG 60.859 66.667 0.00 0.00 0.00 3.77
1057 3946 3.979497 GTGGGAGTGGGGGTTGGG 61.979 72.222 0.00 0.00 0.00 4.12
1060 3949 3.190391 GGAGTGGGGGTTGGGGTT 61.190 66.667 0.00 0.00 0.00 4.11
1061 3950 2.785776 GGAGTGGGGGTTGGGGTTT 61.786 63.158 0.00 0.00 0.00 3.27
1062 3951 1.228769 GAGTGGGGGTTGGGGTTTC 60.229 63.158 0.00 0.00 0.00 2.78
1063 3952 2.014033 GAGTGGGGGTTGGGGTTTCA 62.014 60.000 0.00 0.00 0.00 2.69
1064 3953 1.157513 GTGGGGGTTGGGGTTTCAT 59.842 57.895 0.00 0.00 0.00 2.57
1065 3954 0.472925 GTGGGGGTTGGGGTTTCATT 60.473 55.000 0.00 0.00 0.00 2.57
1066 3955 1.167943 TGGGGGTTGGGGTTTCATTA 58.832 50.000 0.00 0.00 0.00 1.90
1067 3956 1.725182 TGGGGGTTGGGGTTTCATTAT 59.275 47.619 0.00 0.00 0.00 1.28
1068 3957 2.292587 TGGGGGTTGGGGTTTCATTATC 60.293 50.000 0.00 0.00 0.00 1.75
1069 3958 2.394632 GGGGTTGGGGTTTCATTATCC 58.605 52.381 0.00 0.00 0.00 2.59
1070 3959 2.028876 GGGTTGGGGTTTCATTATCCG 58.971 52.381 0.00 0.00 0.00 4.18
1071 3960 2.622190 GGGTTGGGGTTTCATTATCCGT 60.622 50.000 0.00 0.00 0.00 4.69
1072 3961 2.425668 GGTTGGGGTTTCATTATCCGTG 59.574 50.000 0.00 0.00 0.00 4.94
1073 3962 3.349022 GTTGGGGTTTCATTATCCGTGA 58.651 45.455 0.00 0.00 0.00 4.35
1074 3963 3.943671 TGGGGTTTCATTATCCGTGAT 57.056 42.857 0.00 0.00 0.00 3.06
1075 3964 5.127491 GTTGGGGTTTCATTATCCGTGATA 58.873 41.667 0.00 0.00 0.00 2.15
1076 3965 4.968259 TGGGGTTTCATTATCCGTGATAG 58.032 43.478 0.00 0.00 0.00 2.08
1077 3966 3.751698 GGGGTTTCATTATCCGTGATAGC 59.248 47.826 0.00 0.00 0.00 2.97
1078 3967 3.432252 GGGTTTCATTATCCGTGATAGCG 59.568 47.826 0.00 0.00 0.00 4.26
1079 3968 3.120649 GGTTTCATTATCCGTGATAGCGC 60.121 47.826 0.00 0.00 0.00 5.92
1080 3969 3.660501 TTCATTATCCGTGATAGCGCT 57.339 42.857 17.26 17.26 0.00 5.92
1081 3970 2.946564 TCATTATCCGTGATAGCGCTG 58.053 47.619 22.90 1.61 0.00 5.18
1082 3971 1.995484 CATTATCCGTGATAGCGCTGG 59.005 52.381 22.90 12.81 0.00 4.85
1083 3972 0.317160 TTATCCGTGATAGCGCTGGG 59.683 55.000 22.90 13.17 0.00 4.45
1084 3973 1.532604 TATCCGTGATAGCGCTGGGG 61.533 60.000 22.90 13.53 0.00 4.96
1085 3974 3.536917 CCGTGATAGCGCTGGGGA 61.537 66.667 22.90 0.00 0.00 4.81
1086 3975 2.737180 CGTGATAGCGCTGGGGAT 59.263 61.111 22.90 4.81 0.00 3.85
1087 3976 1.665916 CGTGATAGCGCTGGGGATG 60.666 63.158 22.90 2.67 0.00 3.51
1088 3977 1.963338 GTGATAGCGCTGGGGATGC 60.963 63.158 22.90 1.60 0.00 3.91
1129 4018 3.182538 TTTTTGCATGCGAGCAGTG 57.817 47.368 14.09 3.89 46.54 3.66
1130 4019 0.940519 TTTTTGCATGCGAGCAGTGC 60.941 50.000 14.09 7.13 46.54 4.40
1131 4020 2.073037 TTTTGCATGCGAGCAGTGCA 62.073 50.000 19.20 21.82 46.54 4.57
1136 4025 4.691506 TGCGAGCAGTGCATTACA 57.308 50.000 19.20 6.96 37.44 2.41
1137 4026 2.925594 TGCGAGCAGTGCATTACAA 58.074 47.368 19.20 0.00 37.44 2.41
1138 4027 1.233919 TGCGAGCAGTGCATTACAAA 58.766 45.000 19.20 0.00 37.44 2.83
1139 4028 1.069296 TGCGAGCAGTGCATTACAAAC 60.069 47.619 19.20 0.00 37.44 2.93
1140 4029 1.729149 GCGAGCAGTGCATTACAAACC 60.729 52.381 19.20 0.00 0.00 3.27
1141 4030 1.464023 CGAGCAGTGCATTACAAACCG 60.464 52.381 19.20 2.62 0.00 4.44
1142 4031 1.804151 GAGCAGTGCATTACAAACCGA 59.196 47.619 19.20 0.00 0.00 4.69
1143 4032 2.225491 GAGCAGTGCATTACAAACCGAA 59.775 45.455 19.20 0.00 0.00 4.30
1144 4033 2.226437 AGCAGTGCATTACAAACCGAAG 59.774 45.455 19.20 0.00 0.00 3.79
1145 4034 2.584791 CAGTGCATTACAAACCGAAGC 58.415 47.619 0.00 0.00 0.00 3.86
1146 4035 1.196808 AGTGCATTACAAACCGAAGCG 59.803 47.619 0.00 0.00 0.00 4.68
1189 4078 4.488136 CAGCGGCTGCATGGGGTA 62.488 66.667 21.93 0.00 46.23 3.69
1190 4079 3.492353 AGCGGCTGCATGGGGTAT 61.492 61.111 21.93 0.00 46.23 2.73
1191 4080 2.980233 GCGGCTGCATGGGGTATC 60.980 66.667 14.08 0.00 42.15 2.24
1192 4081 2.831770 CGGCTGCATGGGGTATCT 59.168 61.111 0.50 0.00 0.00 1.98
1193 4082 1.302033 CGGCTGCATGGGGTATCTC 60.302 63.158 0.50 0.00 0.00 2.75
1194 4083 1.073897 GGCTGCATGGGGTATCTCC 59.926 63.158 0.50 0.00 0.00 3.71
1195 4084 1.708993 GGCTGCATGGGGTATCTCCA 61.709 60.000 0.50 0.00 38.82 3.86
1196 4085 0.183492 GCTGCATGGGGTATCTCCAA 59.817 55.000 0.00 0.00 37.87 3.53
1197 4086 1.972872 CTGCATGGGGTATCTCCAAC 58.027 55.000 0.00 0.00 37.87 3.77
1198 4087 1.212688 CTGCATGGGGTATCTCCAACA 59.787 52.381 0.00 0.00 37.87 3.33
1199 4088 1.852309 TGCATGGGGTATCTCCAACAT 59.148 47.619 0.00 0.00 37.87 2.71
1200 4089 3.052329 TGCATGGGGTATCTCCAACATA 58.948 45.455 0.00 0.00 37.87 2.29
1201 4090 3.072915 TGCATGGGGTATCTCCAACATAG 59.927 47.826 0.00 0.00 37.87 2.23
1202 4091 3.073062 GCATGGGGTATCTCCAACATAGT 59.927 47.826 0.00 0.00 37.87 2.12
1203 4092 4.645535 CATGGGGTATCTCCAACATAGTG 58.354 47.826 0.00 0.00 37.87 2.74
1204 4093 4.002256 TGGGGTATCTCCAACATAGTGA 57.998 45.455 0.00 0.00 38.11 3.41
1205 4094 4.566837 TGGGGTATCTCCAACATAGTGAT 58.433 43.478 0.00 0.00 38.11 3.06
1206 4095 4.975147 TGGGGTATCTCCAACATAGTGATT 59.025 41.667 0.00 0.00 38.11 2.57
1207 4096 5.163205 TGGGGTATCTCCAACATAGTGATTG 60.163 44.000 0.00 0.00 38.11 2.67
1208 4097 5.071788 GGGGTATCTCCAACATAGTGATTGA 59.928 44.000 0.00 0.00 38.11 2.57
1209 4098 6.409234 GGGGTATCTCCAACATAGTGATTGAA 60.409 42.308 0.00 0.00 38.11 2.69
1210 4099 7.227156 GGGTATCTCCAACATAGTGATTGAAT 58.773 38.462 0.00 0.00 38.11 2.57
1211 4100 7.389053 GGGTATCTCCAACATAGTGATTGAATC 59.611 40.741 0.00 0.00 38.11 2.52
1212 4101 7.933577 GGTATCTCCAACATAGTGATTGAATCA 59.066 37.037 3.29 3.29 34.83 2.57
1213 4102 8.986847 GTATCTCCAACATAGTGATTGAATCAG 58.013 37.037 8.33 0.00 40.53 2.90
1214 4103 7.186570 TCTCCAACATAGTGATTGAATCAGA 57.813 36.000 8.33 0.00 40.53 3.27
1215 4104 7.044181 TCTCCAACATAGTGATTGAATCAGAC 58.956 38.462 8.33 0.00 40.53 3.51
1216 4105 6.950842 TCCAACATAGTGATTGAATCAGACT 58.049 36.000 8.33 5.86 40.53 3.24
1217 4106 6.820152 TCCAACATAGTGATTGAATCAGACTG 59.180 38.462 8.33 8.39 40.53 3.51
1218 4107 6.596888 CCAACATAGTGATTGAATCAGACTGT 59.403 38.462 8.33 8.98 40.53 3.55
1219 4108 7.201591 CCAACATAGTGATTGAATCAGACTGTC 60.202 40.741 8.33 0.00 40.53 3.51
1220 4109 6.939622 ACATAGTGATTGAATCAGACTGTCA 58.060 36.000 8.33 0.00 40.53 3.58
1221 4110 7.389232 ACATAGTGATTGAATCAGACTGTCAA 58.611 34.615 8.33 10.06 40.53 3.18
1222 4111 7.879677 ACATAGTGATTGAATCAGACTGTCAAA 59.120 33.333 8.33 0.00 40.53 2.69
1223 4112 8.890718 CATAGTGATTGAATCAGACTGTCAAAT 58.109 33.333 8.33 0.00 40.53 2.32
1224 4113 7.375106 AGTGATTGAATCAGACTGTCAAATC 57.625 36.000 8.33 11.78 40.53 2.17
1225 4114 6.373774 AGTGATTGAATCAGACTGTCAAATCC 59.626 38.462 8.33 6.15 40.53 3.01
1226 4115 6.373774 GTGATTGAATCAGACTGTCAAATCCT 59.626 38.462 8.33 0.00 40.53 3.24
1227 4116 7.550551 GTGATTGAATCAGACTGTCAAATCCTA 59.449 37.037 8.33 0.00 40.53 2.94
1228 4117 7.550551 TGATTGAATCAGACTGTCAAATCCTAC 59.449 37.037 10.88 0.00 35.07 3.18
1229 4118 6.611613 TGAATCAGACTGTCAAATCCTACT 57.388 37.500 10.88 0.00 0.00 2.57
1230 4119 6.401394 TGAATCAGACTGTCAAATCCTACTG 58.599 40.000 10.88 0.00 0.00 2.74
1231 4120 6.211384 TGAATCAGACTGTCAAATCCTACTGA 59.789 38.462 10.88 0.00 37.50 3.41
1232 4121 6.611613 ATCAGACTGTCAAATCCTACTGAA 57.388 37.500 10.88 0.00 36.86 3.02
1233 4122 6.030548 TCAGACTGTCAAATCCTACTGAAG 57.969 41.667 10.88 0.00 31.69 3.02
1235 4124 3.935828 GACTGTCAAATCCTACTGAAGGC 59.064 47.826 2.24 0.00 46.10 4.35
1236 4125 3.274288 CTGTCAAATCCTACTGAAGGCC 58.726 50.000 0.00 0.00 46.10 5.19
1237 4126 2.026262 TGTCAAATCCTACTGAAGGCCC 60.026 50.000 0.00 0.00 46.10 5.80
1238 4127 2.239907 GTCAAATCCTACTGAAGGCCCT 59.760 50.000 0.00 0.00 46.10 5.19
1239 4128 2.239654 TCAAATCCTACTGAAGGCCCTG 59.760 50.000 0.00 0.00 46.10 4.45
1240 4129 0.548510 AATCCTACTGAAGGCCCTGC 59.451 55.000 0.00 0.00 46.10 4.85
1241 4130 0.621571 ATCCTACTGAAGGCCCTGCA 60.622 55.000 0.00 0.00 46.10 4.41
1242 4131 0.840288 TCCTACTGAAGGCCCTGCAA 60.840 55.000 0.00 0.00 46.10 4.08
1243 4132 0.038166 CCTACTGAAGGCCCTGCAAA 59.962 55.000 0.00 0.00 38.97 3.68
1244 4133 1.457346 CTACTGAAGGCCCTGCAAAG 58.543 55.000 0.00 0.00 0.00 2.77
1245 4134 0.771127 TACTGAAGGCCCTGCAAAGT 59.229 50.000 0.00 0.00 0.00 2.66
1246 4135 0.771127 ACTGAAGGCCCTGCAAAGTA 59.229 50.000 0.00 0.00 0.00 2.24
1247 4136 1.168714 CTGAAGGCCCTGCAAAGTAC 58.831 55.000 0.00 0.00 0.00 2.73
1248 4137 0.476338 TGAAGGCCCTGCAAAGTACA 59.524 50.000 0.00 0.00 0.00 2.90
1249 4138 1.133637 TGAAGGCCCTGCAAAGTACAA 60.134 47.619 0.00 0.00 0.00 2.41
1250 4139 1.541588 GAAGGCCCTGCAAAGTACAAG 59.458 52.381 0.00 0.00 0.00 3.16
1251 4140 0.895559 AGGCCCTGCAAAGTACAAGC 60.896 55.000 0.00 0.00 0.00 4.01
1252 4141 0.895559 GGCCCTGCAAAGTACAAGCT 60.896 55.000 0.00 0.00 0.00 3.74
1253 4142 1.613255 GGCCCTGCAAAGTACAAGCTA 60.613 52.381 0.00 0.00 0.00 3.32
1254 4143 2.369394 GCCCTGCAAAGTACAAGCTAT 58.631 47.619 0.00 0.00 0.00 2.97
1255 4144 2.098117 GCCCTGCAAAGTACAAGCTATG 59.902 50.000 0.00 0.00 0.00 2.23
1256 4145 3.609853 CCCTGCAAAGTACAAGCTATGA 58.390 45.455 0.00 0.00 0.00 2.15
1257 4146 4.202441 CCCTGCAAAGTACAAGCTATGAT 58.798 43.478 0.00 0.00 0.00 2.45
1258 4147 4.274459 CCCTGCAAAGTACAAGCTATGATC 59.726 45.833 0.00 0.00 0.00 2.92
1259 4148 4.025396 CCTGCAAAGTACAAGCTATGATCG 60.025 45.833 0.00 0.00 0.00 3.69
1260 4149 4.754322 TGCAAAGTACAAGCTATGATCGA 58.246 39.130 0.00 0.00 0.00 3.59
1261 4150 4.805719 TGCAAAGTACAAGCTATGATCGAG 59.194 41.667 0.00 0.00 0.00 4.04
1262 4151 4.318404 GCAAAGTACAAGCTATGATCGAGC 60.318 45.833 10.68 10.68 40.42 5.03
1270 4159 2.945278 GCTATGATCGAGCTCCTGAAG 58.055 52.381 8.47 0.00 36.96 3.02
1271 4160 2.352617 GCTATGATCGAGCTCCTGAAGG 60.353 54.545 8.47 0.00 36.96 3.46
1272 4161 0.392336 ATGATCGAGCTCCTGAAGGC 59.608 55.000 8.47 0.00 34.44 4.35
1273 4162 0.972471 TGATCGAGCTCCTGAAGGCA 60.972 55.000 8.47 0.00 34.44 4.75
1274 4163 0.392336 GATCGAGCTCCTGAAGGCAT 59.608 55.000 8.47 0.00 34.44 4.40
1275 4164 0.835941 ATCGAGCTCCTGAAGGCATT 59.164 50.000 8.47 0.00 34.44 3.56
1276 4165 0.176680 TCGAGCTCCTGAAGGCATTC 59.823 55.000 8.47 3.66 35.87 2.67
1277 4166 0.177604 CGAGCTCCTGAAGGCATTCT 59.822 55.000 12.92 0.00 36.33 2.40
1278 4167 1.410517 CGAGCTCCTGAAGGCATTCTA 59.589 52.381 12.92 0.00 36.33 2.10
1279 4168 2.036992 CGAGCTCCTGAAGGCATTCTAT 59.963 50.000 12.92 0.00 36.33 1.98
1280 4169 3.256879 CGAGCTCCTGAAGGCATTCTATA 59.743 47.826 12.92 0.00 36.33 1.31
1281 4170 4.565022 GAGCTCCTGAAGGCATTCTATAC 58.435 47.826 12.92 0.00 36.33 1.47
1282 4171 3.969976 AGCTCCTGAAGGCATTCTATACA 59.030 43.478 12.92 0.00 36.33 2.29
1283 4172 4.040217 AGCTCCTGAAGGCATTCTATACAG 59.960 45.833 12.92 1.24 36.33 2.74
1284 4173 4.039730 GCTCCTGAAGGCATTCTATACAGA 59.960 45.833 12.92 0.00 36.33 3.41
1285 4174 5.782047 CTCCTGAAGGCATTCTATACAGAG 58.218 45.833 12.92 5.64 36.33 3.35
1286 4175 5.458595 TCCTGAAGGCATTCTATACAGAGA 58.541 41.667 12.92 0.00 36.33 3.10
1287 4176 5.303078 TCCTGAAGGCATTCTATACAGAGAC 59.697 44.000 12.92 0.00 36.33 3.36
1288 4177 5.069648 CCTGAAGGCATTCTATACAGAGACA 59.930 44.000 12.92 0.00 36.33 3.41
1289 4178 6.239543 CCTGAAGGCATTCTATACAGAGACAT 60.240 42.308 12.92 0.00 36.33 3.06
1290 4179 7.129457 TGAAGGCATTCTATACAGAGACATT 57.871 36.000 12.92 0.00 36.33 2.71
1291 4180 7.212976 TGAAGGCATTCTATACAGAGACATTC 58.787 38.462 12.92 0.00 36.33 2.67
1292 4181 5.777802 AGGCATTCTATACAGAGACATTCG 58.222 41.667 0.00 0.00 30.73 3.34
1293 4182 4.387256 GGCATTCTATACAGAGACATTCGC 59.613 45.833 0.00 0.00 30.73 4.70
1294 4183 4.387256 GCATTCTATACAGAGACATTCGCC 59.613 45.833 0.00 0.00 30.73 5.54
1295 4184 5.532557 CATTCTATACAGAGACATTCGCCA 58.467 41.667 0.00 0.00 30.73 5.69
1296 4185 4.837896 TCTATACAGAGACATTCGCCAG 57.162 45.455 0.00 0.00 0.00 4.85
1297 4186 4.207955 TCTATACAGAGACATTCGCCAGT 58.792 43.478 0.00 0.00 0.00 4.00
1298 4187 3.895232 ATACAGAGACATTCGCCAGTT 57.105 42.857 0.00 0.00 0.00 3.16
1299 4188 2.550830 ACAGAGACATTCGCCAGTTT 57.449 45.000 0.00 0.00 0.00 2.66
1300 4189 3.678056 ACAGAGACATTCGCCAGTTTA 57.322 42.857 0.00 0.00 0.00 2.01
1301 4190 4.207891 ACAGAGACATTCGCCAGTTTAT 57.792 40.909 0.00 0.00 0.00 1.40
1302 4191 4.579869 ACAGAGACATTCGCCAGTTTATT 58.420 39.130 0.00 0.00 0.00 1.40
1303 4192 4.631813 ACAGAGACATTCGCCAGTTTATTC 59.368 41.667 0.00 0.00 0.00 1.75
1304 4193 3.865745 AGAGACATTCGCCAGTTTATTCG 59.134 43.478 0.00 0.00 0.00 3.34
1305 4194 3.596214 AGACATTCGCCAGTTTATTCGT 58.404 40.909 0.00 0.00 0.00 3.85
1306 4195 3.617263 AGACATTCGCCAGTTTATTCGTC 59.383 43.478 0.00 0.00 0.00 4.20
1307 4196 3.596214 ACATTCGCCAGTTTATTCGTCT 58.404 40.909 0.00 0.00 0.00 4.18
1308 4197 4.000988 ACATTCGCCAGTTTATTCGTCTT 58.999 39.130 0.00 0.00 0.00 3.01
1309 4198 5.172934 ACATTCGCCAGTTTATTCGTCTTA 58.827 37.500 0.00 0.00 0.00 2.10
1310 4199 5.291128 ACATTCGCCAGTTTATTCGTCTTAG 59.709 40.000 0.00 0.00 0.00 2.18
1311 4200 4.445452 TCGCCAGTTTATTCGTCTTAGT 57.555 40.909 0.00 0.00 0.00 2.24
1312 4201 4.813027 TCGCCAGTTTATTCGTCTTAGTT 58.187 39.130 0.00 0.00 0.00 2.24
1313 4202 5.232463 TCGCCAGTTTATTCGTCTTAGTTT 58.768 37.500 0.00 0.00 0.00 2.66
1314 4203 5.697633 TCGCCAGTTTATTCGTCTTAGTTTT 59.302 36.000 0.00 0.00 0.00 2.43
1315 4204 6.867816 TCGCCAGTTTATTCGTCTTAGTTTTA 59.132 34.615 0.00 0.00 0.00 1.52
1316 4205 7.384660 TCGCCAGTTTATTCGTCTTAGTTTTAA 59.615 33.333 0.00 0.00 0.00 1.52
1317 4206 8.173130 CGCCAGTTTATTCGTCTTAGTTTTAAT 58.827 33.333 0.00 0.00 0.00 1.40
1344 4233 3.678056 AACTATGTGTTTGCTCCTCGA 57.322 42.857 0.00 0.00 34.84 4.04
1345 4234 3.238108 ACTATGTGTTTGCTCCTCGAG 57.762 47.619 5.13 5.13 0.00 4.04
1346 4235 2.826128 ACTATGTGTTTGCTCCTCGAGA 59.174 45.455 15.71 0.00 0.00 4.04
1347 4236 3.449018 ACTATGTGTTTGCTCCTCGAGAT 59.551 43.478 15.71 0.00 0.00 2.75
1348 4237 2.839486 TGTGTTTGCTCCTCGAGATT 57.161 45.000 15.71 0.00 0.00 2.40
1349 4238 2.416747 TGTGTTTGCTCCTCGAGATTG 58.583 47.619 15.71 4.45 0.00 2.67
1350 4239 2.224281 TGTGTTTGCTCCTCGAGATTGT 60.224 45.455 15.71 0.00 0.00 2.71
1351 4240 3.006430 TGTGTTTGCTCCTCGAGATTGTA 59.994 43.478 15.71 0.00 0.00 2.41
1352 4241 3.994392 GTGTTTGCTCCTCGAGATTGTAA 59.006 43.478 15.71 6.37 0.00 2.41
1353 4242 4.631813 GTGTTTGCTCCTCGAGATTGTAAT 59.368 41.667 15.71 0.00 0.00 1.89
1354 4243 5.810587 GTGTTTGCTCCTCGAGATTGTAATA 59.189 40.000 15.71 0.00 0.00 0.98
1355 4244 6.312918 GTGTTTGCTCCTCGAGATTGTAATAA 59.687 38.462 15.71 0.00 0.00 1.40
1356 4245 6.535150 TGTTTGCTCCTCGAGATTGTAATAAG 59.465 38.462 15.71 0.00 0.00 1.73
1357 4246 5.201713 TGCTCCTCGAGATTGTAATAAGG 57.798 43.478 15.71 0.00 0.00 2.69
1358 4247 4.649674 TGCTCCTCGAGATTGTAATAAGGT 59.350 41.667 15.71 0.00 0.00 3.50
1359 4248 5.128827 TGCTCCTCGAGATTGTAATAAGGTT 59.871 40.000 15.71 0.00 0.00 3.50
1360 4249 5.463724 GCTCCTCGAGATTGTAATAAGGTTG 59.536 44.000 15.71 0.00 0.00 3.77
1361 4250 5.357257 TCCTCGAGATTGTAATAAGGTTGC 58.643 41.667 15.71 0.00 0.00 4.17
1362 4251 4.511826 CCTCGAGATTGTAATAAGGTTGCC 59.488 45.833 15.71 0.00 0.00 4.52
1363 4252 4.448210 TCGAGATTGTAATAAGGTTGCCC 58.552 43.478 0.00 0.00 0.00 5.36
1364 4253 4.080807 TCGAGATTGTAATAAGGTTGCCCA 60.081 41.667 0.00 0.00 0.00 5.36
1365 4254 4.821805 CGAGATTGTAATAAGGTTGCCCAT 59.178 41.667 0.00 0.00 0.00 4.00
1366 4255 5.277974 CGAGATTGTAATAAGGTTGCCCATG 60.278 44.000 0.00 0.00 0.00 3.66
1367 4256 4.342092 AGATTGTAATAAGGTTGCCCATGC 59.658 41.667 0.00 0.00 38.26 4.06
1376 4265 3.687102 TGCCCATGCACTTGCTGC 61.687 61.111 2.33 0.00 44.23 5.25
1383 4272 2.263540 GCACTTGCTGCATTGGGG 59.736 61.111 1.84 0.00 46.29 4.96
1384 4273 2.277591 GCACTTGCTGCATTGGGGA 61.278 57.895 1.84 0.00 46.29 4.81
1385 4274 1.888018 CACTTGCTGCATTGGGGAG 59.112 57.895 1.84 0.00 38.13 4.30
1386 4275 0.896940 CACTTGCTGCATTGGGGAGT 60.897 55.000 1.84 0.00 37.27 3.85
1387 4276 0.698238 ACTTGCTGCATTGGGGAGTA 59.302 50.000 1.84 0.00 37.27 2.59
1388 4277 1.075374 ACTTGCTGCATTGGGGAGTAA 59.925 47.619 1.84 0.00 37.22 2.24
1389 4278 2.291800 ACTTGCTGCATTGGGGAGTAAT 60.292 45.455 1.84 0.00 38.73 1.89
1390 4279 1.766494 TGCTGCATTGGGGAGTAATG 58.234 50.000 0.00 0.00 37.27 1.90
1391 4280 1.035139 GCTGCATTGGGGAGTAATGG 58.965 55.000 0.00 0.00 37.27 3.16
1392 4281 1.035139 CTGCATTGGGGAGTAATGGC 58.965 55.000 0.00 0.00 36.33 4.40
1393 4282 0.396974 TGCATTGGGGAGTAATGGCC 60.397 55.000 0.00 0.00 36.33 5.36
1394 4283 0.396974 GCATTGGGGAGTAATGGCCA 60.397 55.000 8.56 8.56 36.33 5.36
1395 4284 1.696063 CATTGGGGAGTAATGGCCAG 58.304 55.000 13.05 0.00 33.08 4.85
1396 4285 0.557729 ATTGGGGAGTAATGGCCAGG 59.442 55.000 13.05 0.00 0.00 4.45
1397 4286 0.849094 TTGGGGAGTAATGGCCAGGT 60.849 55.000 13.05 3.90 0.00 4.00
1398 4287 0.045008 TGGGGAGTAATGGCCAGGTA 59.955 55.000 13.05 2.71 0.00 3.08
1399 4288 0.472898 GGGGAGTAATGGCCAGGTAC 59.527 60.000 13.05 16.03 0.00 3.34
1400 4289 0.472898 GGGAGTAATGGCCAGGTACC 59.527 60.000 20.55 2.73 0.00 3.34
1401 4290 1.508256 GGAGTAATGGCCAGGTACCT 58.492 55.000 20.55 9.21 0.00 3.08
1402 4291 1.416772 GGAGTAATGGCCAGGTACCTC 59.583 57.143 12.84 15.52 0.00 3.85
1403 4292 2.116238 GAGTAATGGCCAGGTACCTCA 58.884 52.381 12.84 7.96 0.00 3.86
1404 4293 1.838077 AGTAATGGCCAGGTACCTCAC 59.162 52.381 12.84 6.81 0.00 3.51
1413 4302 1.590147 GGTACCTCACCGTCTGTGG 59.410 63.158 4.06 0.00 45.48 4.17
1414 4303 0.896940 GGTACCTCACCGTCTGTGGA 60.897 60.000 4.06 0.00 45.48 4.02
1415 4304 1.183549 GTACCTCACCGTCTGTGGAT 58.816 55.000 5.66 0.00 45.48 3.41
1416 4305 1.135083 GTACCTCACCGTCTGTGGATG 60.135 57.143 5.66 0.00 45.48 3.51
1422 4311 3.303189 CGTCTGTGGATGGAGGCT 58.697 61.111 0.00 0.00 0.00 4.58
1423 4312 1.153489 CGTCTGTGGATGGAGGCTG 60.153 63.158 0.00 0.00 0.00 4.85
1424 4313 1.892819 CGTCTGTGGATGGAGGCTGT 61.893 60.000 0.00 0.00 0.00 4.40
1425 4314 0.392193 GTCTGTGGATGGAGGCTGTG 60.392 60.000 0.00 0.00 0.00 3.66
1426 4315 1.748122 CTGTGGATGGAGGCTGTGC 60.748 63.158 0.00 0.00 0.00 4.57
1436 4325 4.617875 GGCTGTGCCTAACGATGT 57.382 55.556 0.73 0.00 46.69 3.06
1437 4326 3.752796 GGCTGTGCCTAACGATGTA 57.247 52.632 0.73 0.00 46.69 2.29
1438 4327 2.240493 GGCTGTGCCTAACGATGTAT 57.760 50.000 0.73 0.00 46.69 2.29
1439 4328 1.867233 GGCTGTGCCTAACGATGTATG 59.133 52.381 0.73 0.00 46.69 2.39
1440 4329 1.261619 GCTGTGCCTAACGATGTATGC 59.738 52.381 0.00 0.00 0.00 3.14
1441 4330 1.522676 CTGTGCCTAACGATGTATGCG 59.477 52.381 0.00 0.00 0.00 4.73
1442 4331 1.134936 TGTGCCTAACGATGTATGCGT 60.135 47.619 0.00 0.00 44.94 5.24
1443 4332 1.257936 GTGCCTAACGATGTATGCGTG 59.742 52.381 0.00 0.00 41.75 5.34
1444 4333 1.134936 TGCCTAACGATGTATGCGTGT 60.135 47.619 0.00 0.00 41.75 4.49
1445 4334 1.931172 GCCTAACGATGTATGCGTGTT 59.069 47.619 0.00 0.00 41.75 3.32
1446 4335 2.285602 GCCTAACGATGTATGCGTGTTG 60.286 50.000 0.00 0.00 41.75 3.33
1447 4336 2.284150 CCTAACGATGTATGCGTGTTGG 59.716 50.000 0.00 0.00 41.75 3.77
1448 4337 1.803334 AACGATGTATGCGTGTTGGT 58.197 45.000 0.00 0.00 41.75 3.67
1449 4338 1.075542 ACGATGTATGCGTGTTGGTG 58.924 50.000 0.00 0.00 40.94 4.17
1450 4339 0.373370 CGATGTATGCGTGTTGGTGG 59.627 55.000 0.00 0.00 0.00 4.61
1451 4340 0.098728 GATGTATGCGTGTTGGTGGC 59.901 55.000 0.00 0.00 0.00 5.01
1452 4341 1.312371 ATGTATGCGTGTTGGTGGCC 61.312 55.000 0.00 0.00 0.00 5.36
1453 4342 1.969064 GTATGCGTGTTGGTGGCCA 60.969 57.895 0.00 0.00 0.00 5.36
1454 4343 1.673993 TATGCGTGTTGGTGGCCAG 60.674 57.895 5.11 0.00 33.81 4.85
1458 4347 2.672996 GTGTTGGTGGCCAGCGAT 60.673 61.111 27.19 0.00 37.56 4.58
1459 4348 2.672651 TGTTGGTGGCCAGCGATG 60.673 61.111 27.19 0.00 37.56 3.84
1460 4349 2.672996 GTTGGTGGCCAGCGATGT 60.673 61.111 27.19 0.00 33.81 3.06
1461 4350 2.359850 TTGGTGGCCAGCGATGTC 60.360 61.111 28.67 4.45 33.81 3.06
1462 4351 4.758251 TGGTGGCCAGCGATGTCG 62.758 66.667 28.67 0.00 43.27 4.35
1472 4361 2.182791 CGATGTCGCTGAGCCAGT 59.817 61.111 0.00 0.00 33.43 4.00
1473 4362 1.446792 CGATGTCGCTGAGCCAGTT 60.447 57.895 0.00 0.00 33.43 3.16
1474 4363 1.690283 CGATGTCGCTGAGCCAGTTG 61.690 60.000 0.00 0.00 33.43 3.16
1475 4364 0.390340 GATGTCGCTGAGCCAGTTGA 60.390 55.000 0.00 0.00 33.43 3.18
1476 4365 0.390866 ATGTCGCTGAGCCAGTTGAG 60.391 55.000 0.00 0.00 33.43 3.02
1477 4366 1.005630 GTCGCTGAGCCAGTTGAGT 60.006 57.895 0.00 0.00 33.43 3.41
1478 4367 0.243907 GTCGCTGAGCCAGTTGAGTA 59.756 55.000 0.00 0.00 33.43 2.59
1479 4368 0.966179 TCGCTGAGCCAGTTGAGTAA 59.034 50.000 0.00 0.00 33.43 2.24
1480 4369 1.071605 CGCTGAGCCAGTTGAGTAAC 58.928 55.000 0.00 0.00 37.06 2.50
1481 4370 1.071605 GCTGAGCCAGTTGAGTAACG 58.928 55.000 0.00 0.00 41.71 3.18
1482 4371 1.714794 CTGAGCCAGTTGAGTAACGG 58.285 55.000 0.00 0.00 41.71 4.44
1486 4375 1.207329 AGCCAGTTGAGTAACGGGATC 59.793 52.381 12.44 0.00 45.53 3.36
1487 4376 4.060485 AGCCAGTTGAGTAACGGGATCC 62.060 54.545 1.92 1.92 45.53 3.36
1489 4378 3.328382 CAGTTGAGTAACGGGATCCAA 57.672 47.619 15.23 0.00 41.71 3.53
1490 4379 3.262420 CAGTTGAGTAACGGGATCCAAG 58.738 50.000 15.23 9.56 41.71 3.61
1491 4380 2.904434 AGTTGAGTAACGGGATCCAAGT 59.096 45.455 15.23 10.27 41.71 3.16
1492 4381 3.000727 GTTGAGTAACGGGATCCAAGTG 58.999 50.000 15.23 2.41 0.00 3.16
1493 4382 1.553248 TGAGTAACGGGATCCAAGTGG 59.447 52.381 15.23 0.00 0.00 4.00
1494 4383 1.553704 GAGTAACGGGATCCAAGTGGT 59.446 52.381 15.23 0.93 36.34 4.16
1495 4384 1.982958 AGTAACGGGATCCAAGTGGTT 59.017 47.619 15.23 11.12 36.34 3.67
1496 4385 2.027469 AGTAACGGGATCCAAGTGGTTC 60.027 50.000 15.23 0.00 36.34 3.62
1502 4391 2.115343 GATCCAAGTGGTTCCAGGTC 57.885 55.000 0.00 0.00 36.34 3.85
1503 4392 1.351017 GATCCAAGTGGTTCCAGGTCA 59.649 52.381 0.00 0.00 36.34 4.02
1504 4393 1.217916 TCCAAGTGGTTCCAGGTCAA 58.782 50.000 0.00 0.00 36.34 3.18
1505 4394 1.566703 TCCAAGTGGTTCCAGGTCAAA 59.433 47.619 0.00 0.00 36.34 2.69
1506 4395 2.024846 TCCAAGTGGTTCCAGGTCAAAA 60.025 45.455 0.00 0.00 36.34 2.44
1507 4396 2.763448 CCAAGTGGTTCCAGGTCAAAAA 59.237 45.455 0.00 0.00 0.00 1.94
1636 4822 5.775701 CGATCCCCTTTCTCCTTATTCTCTA 59.224 44.000 0.00 0.00 0.00 2.43
1678 5238 5.420421 TCTTTCCTGATCTCCTCTGTACAAG 59.580 44.000 0.00 0.00 0.00 3.16
1867 5427 1.760086 CCTCCTCGATCTGCCAGGT 60.760 63.158 0.00 0.00 0.00 4.00
1873 5433 2.105128 GATCTGCCAGGTCGGTCG 59.895 66.667 0.00 0.00 36.97 4.79
1913 5473 0.747255 GGGCTCGATGAGAAGCTACA 59.253 55.000 0.00 0.00 0.00 2.74
1983 5544 4.619227 CTTGGTGGCGACGTGGGT 62.619 66.667 0.00 0.00 0.00 4.51
2010 5571 1.142748 CGTCTCCCACATCCTGCTC 59.857 63.158 0.00 0.00 0.00 4.26
2012 5573 1.305297 TCTCCCACATCCTGCTCGT 60.305 57.895 0.00 0.00 0.00 4.18
2051 5612 2.504367 GATGCTGGTGGTGTTGTACTT 58.496 47.619 0.00 0.00 0.00 2.24
2258 5826 5.862924 ATATAATGTACATGAAGGCACGC 57.137 39.130 9.63 0.00 0.00 5.34
2477 6049 9.677567 AAAATAGGCGCTATTACATTTTACATG 57.322 29.630 7.64 0.00 35.85 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.070429 ACAAAAACTCTGCTCGCAAAG 57.930 42.857 0.00 0.00 0.00 2.77
76 77 9.614792 ATTATCAACTAAAGTATCAAGGGACAC 57.385 33.333 0.00 0.00 0.00 3.67
111 112 6.631238 CGATCACAAAACAAAAGTTCGTACAT 59.369 34.615 0.00 0.00 0.00 2.29
234 239 9.893305 AGCAAAATAAACTATCACTACACAAAC 57.107 29.630 0.00 0.00 0.00 2.93
339 344 2.425124 CGCGCAACAAGGTTCACG 60.425 61.111 8.75 0.00 0.00 4.35
476 481 8.062448 GCATTGGTTCTATCGTATTTCACTAAC 58.938 37.037 0.00 0.00 0.00 2.34
478 483 7.497595 AGCATTGGTTCTATCGTATTTCACTA 58.502 34.615 0.00 0.00 0.00 2.74
508 513 9.346725 CTAGAAAAACCATGAATTGTAGCTTTC 57.653 33.333 0.00 0.00 0.00 2.62
695 723 4.944048 AGCAAATACTGACCAACAAAACC 58.056 39.130 0.00 0.00 0.00 3.27
748 802 4.574828 ACGTGATGATATAAACACCCTTGC 59.425 41.667 0.00 0.00 0.00 4.01
794 869 3.771479 TCTGTACATGAAGCAGAGTGGAT 59.229 43.478 0.00 0.00 34.72 3.41
825 3711 9.733556 ATGGCCTTTCATAACGTGATAATATAA 57.266 29.630 3.32 0.00 36.54 0.98
856 3745 0.110486 ATATTGGTGGGACCCATCGC 59.890 55.000 18.51 3.40 37.47 4.58
857 3746 1.699634 AGATATTGGTGGGACCCATCG 59.300 52.381 18.51 0.00 37.47 3.84
872 3761 5.814705 GCAGCAGTAACTTCAACTGAGATAT 59.185 40.000 7.39 0.00 45.89 1.63
873 3762 5.047021 AGCAGCAGTAACTTCAACTGAGATA 60.047 40.000 7.39 0.00 45.89 1.98
874 3763 3.999663 GCAGCAGTAACTTCAACTGAGAT 59.000 43.478 7.39 0.00 45.89 2.75
875 3764 3.070159 AGCAGCAGTAACTTCAACTGAGA 59.930 43.478 7.39 0.00 45.89 3.27
876 3765 3.397482 AGCAGCAGTAACTTCAACTGAG 58.603 45.455 7.39 0.56 45.89 3.35
877 3766 3.181466 TGAGCAGCAGTAACTTCAACTGA 60.181 43.478 7.39 0.00 45.89 3.41
878 3767 3.133691 TGAGCAGCAGTAACTTCAACTG 58.866 45.455 0.00 0.00 45.80 3.16
879 3768 3.475566 TGAGCAGCAGTAACTTCAACT 57.524 42.857 0.00 0.00 0.00 3.16
880 3769 3.669023 GCATGAGCAGCAGTAACTTCAAC 60.669 47.826 0.00 0.00 41.58 3.18
881 3770 2.485426 GCATGAGCAGCAGTAACTTCAA 59.515 45.455 0.00 0.00 41.58 2.69
882 3771 2.079158 GCATGAGCAGCAGTAACTTCA 58.921 47.619 0.00 0.00 41.58 3.02
883 3772 2.354259 AGCATGAGCAGCAGTAACTTC 58.646 47.619 0.00 0.00 45.49 3.01
884 3773 2.486472 AGCATGAGCAGCAGTAACTT 57.514 45.000 0.00 0.00 45.49 2.66
885 3774 2.158986 CCTAGCATGAGCAGCAGTAACT 60.159 50.000 0.00 0.00 45.49 2.24
886 3775 2.208431 CCTAGCATGAGCAGCAGTAAC 58.792 52.381 0.00 0.00 45.49 2.50
887 3776 1.833630 ACCTAGCATGAGCAGCAGTAA 59.166 47.619 0.00 0.00 45.49 2.24
888 3777 1.410517 GACCTAGCATGAGCAGCAGTA 59.589 52.381 0.00 0.00 45.49 2.74
889 3778 0.177604 GACCTAGCATGAGCAGCAGT 59.822 55.000 0.00 0.00 45.49 4.40
890 3779 0.532417 GGACCTAGCATGAGCAGCAG 60.532 60.000 0.00 0.00 45.49 4.24
891 3780 0.979709 AGGACCTAGCATGAGCAGCA 60.980 55.000 0.00 0.00 45.49 4.41
892 3781 0.532417 CAGGACCTAGCATGAGCAGC 60.532 60.000 0.00 0.00 45.49 5.25
893 3782 0.106335 CCAGGACCTAGCATGAGCAG 59.894 60.000 0.00 0.00 45.49 4.24
894 3783 1.340399 CCCAGGACCTAGCATGAGCA 61.340 60.000 0.00 0.00 45.49 4.26
895 3784 1.449353 CCCAGGACCTAGCATGAGC 59.551 63.158 0.00 0.00 42.56 4.26
896 3785 1.449353 GCCCAGGACCTAGCATGAG 59.551 63.158 10.19 0.00 0.00 2.90
897 3786 2.434843 CGCCCAGGACCTAGCATGA 61.435 63.158 14.36 0.00 0.00 3.07
898 3787 1.762522 ATCGCCCAGGACCTAGCATG 61.763 60.000 14.36 0.00 0.00 4.06
899 3788 1.056700 AATCGCCCAGGACCTAGCAT 61.057 55.000 14.36 5.91 0.00 3.79
900 3789 1.689233 AATCGCCCAGGACCTAGCA 60.689 57.895 14.36 4.16 0.00 3.49
901 3790 1.227674 CAATCGCCCAGGACCTAGC 60.228 63.158 0.00 0.00 0.00 3.42
902 3791 0.830648 TTCAATCGCCCAGGACCTAG 59.169 55.000 0.00 0.00 0.00 3.02
903 3792 1.416401 GATTCAATCGCCCAGGACCTA 59.584 52.381 0.00 0.00 0.00 3.08
904 3793 0.181350 GATTCAATCGCCCAGGACCT 59.819 55.000 0.00 0.00 0.00 3.85
905 3794 0.107214 TGATTCAATCGCCCAGGACC 60.107 55.000 0.00 0.00 0.00 4.46
906 3795 1.750193 TTGATTCAATCGCCCAGGAC 58.250 50.000 0.00 0.00 0.00 3.85
907 3796 2.300433 CATTGATTCAATCGCCCAGGA 58.700 47.619 8.95 0.00 31.05 3.86
908 3797 1.269413 GCATTGATTCAATCGCCCAGG 60.269 52.381 8.95 0.00 31.05 4.45
909 3798 1.406180 TGCATTGATTCAATCGCCCAG 59.594 47.619 20.87 8.63 31.05 4.45
910 3799 1.472188 TGCATTGATTCAATCGCCCA 58.528 45.000 20.87 10.61 31.05 5.36
911 3800 2.582728 TTGCATTGATTCAATCGCCC 57.417 45.000 20.87 8.86 31.05 6.13
912 3801 5.473796 AAAATTGCATTGATTCAATCGCC 57.526 34.783 20.87 10.60 31.05 5.54
932 3821 4.755123 GCACTGTCTGCTCCTTACTAAAAA 59.245 41.667 0.00 0.00 43.33 1.94
933 3822 4.315803 GCACTGTCTGCTCCTTACTAAAA 58.684 43.478 0.00 0.00 43.33 1.52
934 3823 3.306780 GGCACTGTCTGCTCCTTACTAAA 60.307 47.826 0.00 0.00 46.25 1.85
935 3824 2.233922 GGCACTGTCTGCTCCTTACTAA 59.766 50.000 0.00 0.00 46.25 2.24
936 3825 1.825474 GGCACTGTCTGCTCCTTACTA 59.175 52.381 0.00 0.00 46.25 1.82
937 3826 0.610687 GGCACTGTCTGCTCCTTACT 59.389 55.000 0.00 0.00 46.25 2.24
938 3827 0.737715 CGGCACTGTCTGCTCCTTAC 60.738 60.000 0.00 0.00 46.25 2.34
939 3828 1.591703 CGGCACTGTCTGCTCCTTA 59.408 57.895 0.00 0.00 46.25 2.69
940 3829 2.345244 CGGCACTGTCTGCTCCTT 59.655 61.111 0.00 0.00 46.25 3.36
941 3830 3.699894 CCGGCACTGTCTGCTCCT 61.700 66.667 0.00 0.00 46.25 3.69
943 3832 4.385405 AGCCGGCACTGTCTGCTC 62.385 66.667 31.54 0.00 46.25 4.26
944 3833 4.694233 CAGCCGGCACTGTCTGCT 62.694 66.667 31.54 0.00 46.25 4.24
963 3852 1.222661 CCATCTGCTAGGCTGTGCA 59.777 57.895 14.52 14.52 37.63 4.57
964 3853 0.813210 GTCCATCTGCTAGGCTGTGC 60.813 60.000 0.00 1.84 0.00 4.57
965 3854 0.538584 TGTCCATCTGCTAGGCTGTG 59.461 55.000 0.00 0.00 0.00 3.66
966 3855 1.209019 CTTGTCCATCTGCTAGGCTGT 59.791 52.381 0.00 0.00 0.00 4.40
967 3856 1.483827 TCTTGTCCATCTGCTAGGCTG 59.516 52.381 0.00 0.00 0.00 4.85
968 3857 1.484240 GTCTTGTCCATCTGCTAGGCT 59.516 52.381 0.00 0.00 0.00 4.58
969 3858 1.474143 GGTCTTGTCCATCTGCTAGGC 60.474 57.143 0.00 0.00 0.00 3.93
970 3859 2.114616 AGGTCTTGTCCATCTGCTAGG 58.885 52.381 0.00 0.00 0.00 3.02
971 3860 2.762887 TCAGGTCTTGTCCATCTGCTAG 59.237 50.000 0.00 0.00 0.00 3.42
972 3861 2.820178 TCAGGTCTTGTCCATCTGCTA 58.180 47.619 0.00 0.00 0.00 3.49
973 3862 1.649321 TCAGGTCTTGTCCATCTGCT 58.351 50.000 0.00 0.00 0.00 4.24
974 3863 2.093288 TCATCAGGTCTTGTCCATCTGC 60.093 50.000 0.00 0.00 0.00 4.26
975 3864 3.431905 CCTCATCAGGTCTTGTCCATCTG 60.432 52.174 0.00 0.00 34.60 2.90
976 3865 2.770802 CCTCATCAGGTCTTGTCCATCT 59.229 50.000 0.00 0.00 34.60 2.90
977 3866 2.768527 TCCTCATCAGGTCTTGTCCATC 59.231 50.000 0.00 0.00 41.28 3.51
978 3867 2.503356 GTCCTCATCAGGTCTTGTCCAT 59.497 50.000 0.00 0.00 41.28 3.41
979 3868 1.902508 GTCCTCATCAGGTCTTGTCCA 59.097 52.381 0.00 0.00 41.28 4.02
980 3869 1.902508 TGTCCTCATCAGGTCTTGTCC 59.097 52.381 0.00 0.00 41.28 4.02
981 3870 3.055530 ACATGTCCTCATCAGGTCTTGTC 60.056 47.826 0.00 0.00 40.12 3.18
982 3871 2.909006 ACATGTCCTCATCAGGTCTTGT 59.091 45.455 0.00 0.00 39.69 3.16
983 3872 3.623906 ACATGTCCTCATCAGGTCTTG 57.376 47.619 0.00 0.00 41.28 3.02
984 3873 3.584406 TCAACATGTCCTCATCAGGTCTT 59.416 43.478 0.00 0.00 41.28 3.01
985 3874 3.176411 TCAACATGTCCTCATCAGGTCT 58.824 45.455 0.00 0.00 41.28 3.85
986 3875 3.616956 TCAACATGTCCTCATCAGGTC 57.383 47.619 0.00 0.00 41.28 3.85
987 3876 4.371624 TTTCAACATGTCCTCATCAGGT 57.628 40.909 0.00 0.00 41.28 4.00
988 3877 5.416639 TGATTTTCAACATGTCCTCATCAGG 59.583 40.000 0.00 0.00 42.01 3.86
989 3878 6.505044 TGATTTTCAACATGTCCTCATCAG 57.495 37.500 0.00 0.00 31.15 2.90
990 3879 6.897706 TTGATTTTCAACATGTCCTCATCA 57.102 33.333 0.00 1.33 30.26 3.07
1003 3892 3.119173 GCCCCATCGATGTTGATTTTCAA 60.119 43.478 23.27 0.00 33.32 2.69
1004 3893 2.426738 GCCCCATCGATGTTGATTTTCA 59.573 45.455 23.27 0.00 0.00 2.69
1005 3894 2.541588 CGCCCCATCGATGTTGATTTTC 60.542 50.000 23.27 3.71 0.00 2.29
1006 3895 1.405105 CGCCCCATCGATGTTGATTTT 59.595 47.619 23.27 0.00 0.00 1.82
1007 3896 1.024271 CGCCCCATCGATGTTGATTT 58.976 50.000 23.27 0.00 0.00 2.17
1008 3897 0.107214 ACGCCCCATCGATGTTGATT 60.107 50.000 23.27 2.67 0.00 2.57
1009 3898 0.107214 AACGCCCCATCGATGTTGAT 60.107 50.000 23.27 2.88 0.00 2.57
1010 3899 0.322098 AAACGCCCCATCGATGTTGA 60.322 50.000 23.27 0.00 0.00 3.18
1011 3900 0.098728 GAAACGCCCCATCGATGTTG 59.901 55.000 23.27 14.63 0.00 3.33
1012 3901 0.322098 TGAAACGCCCCATCGATGTT 60.322 50.000 23.27 10.26 0.00 2.71
1013 3902 0.107214 ATGAAACGCCCCATCGATGT 60.107 50.000 23.27 3.32 0.00 3.06
1014 3903 1.800586 CTATGAAACGCCCCATCGATG 59.199 52.381 18.76 18.76 0.00 3.84
1015 3904 1.416401 ACTATGAAACGCCCCATCGAT 59.584 47.619 0.00 0.00 0.00 3.59
1016 3905 0.828022 ACTATGAAACGCCCCATCGA 59.172 50.000 0.00 0.00 0.00 3.59
1017 3906 2.132762 GTACTATGAAACGCCCCATCG 58.867 52.381 0.00 0.00 0.00 3.84
1018 3907 2.158871 TGGTACTATGAAACGCCCCATC 60.159 50.000 0.00 0.00 0.00 3.51
1019 3908 1.841277 TGGTACTATGAAACGCCCCAT 59.159 47.619 0.00 0.00 0.00 4.00
1020 3909 1.208535 CTGGTACTATGAAACGCCCCA 59.791 52.381 0.00 0.00 0.00 4.96
1021 3910 1.208776 ACTGGTACTATGAAACGCCCC 59.791 52.381 0.00 0.00 0.00 5.80
1022 3911 2.277084 CACTGGTACTATGAAACGCCC 58.723 52.381 0.00 0.00 0.00 6.13
1023 3912 2.277084 CCACTGGTACTATGAAACGCC 58.723 52.381 0.00 0.00 0.00 5.68
1024 3913 2.093869 TCCCACTGGTACTATGAAACGC 60.094 50.000 0.00 0.00 0.00 4.84
1025 3914 3.194968 ACTCCCACTGGTACTATGAAACG 59.805 47.826 0.00 0.00 0.00 3.60
1026 3915 4.504858 CACTCCCACTGGTACTATGAAAC 58.495 47.826 0.00 0.00 0.00 2.78
1027 3916 3.517901 CCACTCCCACTGGTACTATGAAA 59.482 47.826 0.00 0.00 0.00 2.69
1028 3917 3.104512 CCACTCCCACTGGTACTATGAA 58.895 50.000 0.00 0.00 0.00 2.57
1029 3918 2.625883 CCCACTCCCACTGGTACTATGA 60.626 54.545 0.00 0.00 0.00 2.15
1030 3919 1.762957 CCCACTCCCACTGGTACTATG 59.237 57.143 0.00 0.00 0.00 2.23
1031 3920 1.344087 CCCCACTCCCACTGGTACTAT 60.344 57.143 0.00 0.00 0.00 2.12
1032 3921 0.042131 CCCCACTCCCACTGGTACTA 59.958 60.000 0.00 0.00 0.00 1.82
1033 3922 1.229529 CCCCACTCCCACTGGTACT 60.230 63.158 0.00 0.00 0.00 2.73
1034 3923 2.298661 CCCCCACTCCCACTGGTAC 61.299 68.421 0.00 0.00 0.00 3.34
1035 3924 2.124085 CCCCCACTCCCACTGGTA 59.876 66.667 0.00 0.00 0.00 3.25
1036 3925 3.749947 AACCCCCACTCCCACTGGT 62.750 63.158 0.00 0.00 0.00 4.00
1037 3926 2.858974 AACCCCCACTCCCACTGG 60.859 66.667 0.00 0.00 0.00 4.00
1038 3927 2.436109 CAACCCCCACTCCCACTG 59.564 66.667 0.00 0.00 0.00 3.66
1039 3928 2.858974 CCAACCCCCACTCCCACT 60.859 66.667 0.00 0.00 0.00 4.00
1040 3929 3.979497 CCCAACCCCCACTCCCAC 61.979 72.222 0.00 0.00 0.00 4.61
1043 3932 2.725127 GAAACCCCAACCCCCACTCC 62.725 65.000 0.00 0.00 0.00 3.85
1044 3933 1.228769 GAAACCCCAACCCCCACTC 60.229 63.158 0.00 0.00 0.00 3.51
1045 3934 1.376249 ATGAAACCCCAACCCCCACT 61.376 55.000 0.00 0.00 0.00 4.00
1046 3935 0.472925 AATGAAACCCCAACCCCCAC 60.473 55.000 0.00 0.00 0.00 4.61
1047 3936 1.167943 TAATGAAACCCCAACCCCCA 58.832 50.000 0.00 0.00 0.00 4.96
1048 3937 2.394632 GATAATGAAACCCCAACCCCC 58.605 52.381 0.00 0.00 0.00 5.40
1049 3938 2.394632 GGATAATGAAACCCCAACCCC 58.605 52.381 0.00 0.00 0.00 4.95
1050 3939 2.028876 CGGATAATGAAACCCCAACCC 58.971 52.381 0.00 0.00 0.00 4.11
1051 3940 2.425668 CACGGATAATGAAACCCCAACC 59.574 50.000 0.00 0.00 0.00 3.77
1052 3941 3.349022 TCACGGATAATGAAACCCCAAC 58.651 45.455 0.00 0.00 0.00 3.77
1053 3942 3.722908 TCACGGATAATGAAACCCCAA 57.277 42.857 0.00 0.00 0.00 4.12
1054 3943 3.943671 ATCACGGATAATGAAACCCCA 57.056 42.857 0.00 0.00 0.00 4.96
1055 3944 3.751698 GCTATCACGGATAATGAAACCCC 59.248 47.826 0.00 0.00 0.00 4.95
1056 3945 3.432252 CGCTATCACGGATAATGAAACCC 59.568 47.826 0.00 0.00 0.00 4.11
1057 3946 3.120649 GCGCTATCACGGATAATGAAACC 60.121 47.826 0.00 0.00 0.00 3.27
1058 3947 3.741344 AGCGCTATCACGGATAATGAAAC 59.259 43.478 8.99 0.00 0.00 2.78
1059 3948 3.740832 CAGCGCTATCACGGATAATGAAA 59.259 43.478 10.99 0.00 0.00 2.69
1060 3949 3.317150 CAGCGCTATCACGGATAATGAA 58.683 45.455 10.99 0.00 0.00 2.57
1061 3950 2.352715 CCAGCGCTATCACGGATAATGA 60.353 50.000 10.99 0.00 0.00 2.57
1062 3951 1.995484 CCAGCGCTATCACGGATAATG 59.005 52.381 10.99 0.00 0.00 1.90
1063 3952 1.066858 CCCAGCGCTATCACGGATAAT 60.067 52.381 10.99 0.00 0.00 1.28
1064 3953 0.317160 CCCAGCGCTATCACGGATAA 59.683 55.000 10.99 0.00 0.00 1.75
1065 3954 1.532604 CCCCAGCGCTATCACGGATA 61.533 60.000 10.99 0.00 0.00 2.59
1066 3955 2.737180 CCCAGCGCTATCACGGAT 59.263 61.111 10.99 0.00 0.00 4.18
1067 3956 3.536917 CCCCAGCGCTATCACGGA 61.537 66.667 10.99 0.00 0.00 4.69
1068 3957 2.872388 ATCCCCAGCGCTATCACGG 61.872 63.158 10.99 6.68 0.00 4.94
1069 3958 1.665916 CATCCCCAGCGCTATCACG 60.666 63.158 10.99 0.00 0.00 4.35
1070 3959 1.963338 GCATCCCCAGCGCTATCAC 60.963 63.158 10.99 0.00 0.00 3.06
1071 3960 2.427320 GCATCCCCAGCGCTATCA 59.573 61.111 10.99 0.00 0.00 2.15
1091 3980 2.543067 ATTTCCAGTCCCTGCTCCGC 62.543 60.000 0.00 0.00 0.00 5.54
1092 3981 0.035056 AATTTCCAGTCCCTGCTCCG 60.035 55.000 0.00 0.00 0.00 4.63
1093 3982 2.222227 AAATTTCCAGTCCCTGCTCC 57.778 50.000 0.00 0.00 0.00 4.70
1111 4000 0.940519 GCACTGCTCGCATGCAAAAA 60.941 50.000 19.57 0.00 42.83 1.94
1112 4001 1.372004 GCACTGCTCGCATGCAAAA 60.372 52.632 19.57 1.03 42.83 2.44
1113 4002 2.256158 GCACTGCTCGCATGCAAA 59.744 55.556 19.57 3.85 42.83 3.68
1114 4003 2.979120 TGCACTGCTCGCATGCAA 60.979 55.556 19.57 0.00 45.96 4.08
1119 4008 1.069296 GTTTGTAATGCACTGCTCGCA 60.069 47.619 1.98 0.00 44.94 5.10
1120 4009 1.606606 GTTTGTAATGCACTGCTCGC 58.393 50.000 1.98 0.00 0.00 5.03
1121 4010 1.464023 CGGTTTGTAATGCACTGCTCG 60.464 52.381 1.98 0.00 0.00 5.03
1122 4011 1.804151 TCGGTTTGTAATGCACTGCTC 59.196 47.619 1.98 0.00 0.00 4.26
1123 4012 1.890876 TCGGTTTGTAATGCACTGCT 58.109 45.000 1.98 0.00 0.00 4.24
1124 4013 2.584791 CTTCGGTTTGTAATGCACTGC 58.415 47.619 0.00 0.00 0.00 4.40
1125 4014 2.584791 GCTTCGGTTTGTAATGCACTG 58.415 47.619 0.00 0.00 0.00 3.66
1126 4015 1.196808 CGCTTCGGTTTGTAATGCACT 59.803 47.619 0.00 0.00 0.00 4.40
1127 4016 1.602191 CGCTTCGGTTTGTAATGCAC 58.398 50.000 0.00 0.00 0.00 4.57
1128 4017 0.519519 CCGCTTCGGTTTGTAATGCA 59.480 50.000 0.00 0.00 42.73 3.96
1129 4018 3.306206 CCGCTTCGGTTTGTAATGC 57.694 52.632 0.00 0.00 42.73 3.56
1140 4029 0.509499 TAAAACACGCTTCCGCTTCG 59.491 50.000 0.00 0.00 38.22 3.79
1141 4030 2.304413 GTTAAAACACGCTTCCGCTTC 58.696 47.619 0.00 0.00 38.22 3.86
1142 4031 1.333435 CGTTAAAACACGCTTCCGCTT 60.333 47.619 0.00 0.00 38.22 4.68
1143 4032 0.233848 CGTTAAAACACGCTTCCGCT 59.766 50.000 0.00 0.00 38.22 5.52
1144 4033 2.691486 CGTTAAAACACGCTTCCGC 58.309 52.632 0.00 0.00 38.22 5.54
1172 4061 3.779850 ATACCCCATGCAGCCGCTG 62.780 63.158 16.47 16.47 39.64 5.18
1173 4062 3.482232 GATACCCCATGCAGCCGCT 62.482 63.158 0.00 0.00 39.64 5.52
1174 4063 2.980233 GATACCCCATGCAGCCGC 60.980 66.667 0.00 0.00 39.24 6.53
1175 4064 1.302033 GAGATACCCCATGCAGCCG 60.302 63.158 0.00 0.00 0.00 5.52
1176 4065 1.073897 GGAGATACCCCATGCAGCC 59.926 63.158 0.00 0.00 0.00 4.85
1177 4066 0.183492 TTGGAGATACCCCATGCAGC 59.817 55.000 0.00 0.00 38.00 5.25
1178 4067 1.212688 TGTTGGAGATACCCCATGCAG 59.787 52.381 0.00 0.00 38.00 4.41
1179 4068 1.294041 TGTTGGAGATACCCCATGCA 58.706 50.000 0.00 0.00 38.00 3.96
1180 4069 2.664402 ATGTTGGAGATACCCCATGC 57.336 50.000 0.00 0.00 38.00 4.06
1181 4070 4.347876 TCACTATGTTGGAGATACCCCATG 59.652 45.833 0.00 0.00 38.00 3.66
1182 4071 4.566837 TCACTATGTTGGAGATACCCCAT 58.433 43.478 0.00 0.00 38.00 4.00
1183 4072 4.002256 TCACTATGTTGGAGATACCCCA 57.998 45.455 0.00 0.00 38.00 4.96
1184 4073 5.071788 TCAATCACTATGTTGGAGATACCCC 59.928 44.000 0.00 0.00 38.00 4.95
1185 4074 6.174720 TCAATCACTATGTTGGAGATACCC 57.825 41.667 0.00 0.00 38.00 3.69
1186 4075 7.933577 TGATTCAATCACTATGTTGGAGATACC 59.066 37.037 0.00 0.00 33.59 2.73
1187 4076 8.893219 TGATTCAATCACTATGTTGGAGATAC 57.107 34.615 0.00 0.00 33.59 2.24
1188 4077 8.927411 TCTGATTCAATCACTATGTTGGAGATA 58.073 33.333 0.00 0.00 35.06 1.98
1189 4078 7.714377 GTCTGATTCAATCACTATGTTGGAGAT 59.286 37.037 0.00 0.00 35.06 2.75
1190 4079 7.044181 GTCTGATTCAATCACTATGTTGGAGA 58.956 38.462 0.00 0.00 35.06 3.71
1191 4080 7.011202 CAGTCTGATTCAATCACTATGTTGGAG 59.989 40.741 0.00 0.00 35.06 3.86
1192 4081 6.820152 CAGTCTGATTCAATCACTATGTTGGA 59.180 38.462 0.00 0.00 35.06 3.53
1193 4082 6.596888 ACAGTCTGATTCAATCACTATGTTGG 59.403 38.462 6.91 0.00 35.06 3.77
1194 4083 7.332678 TGACAGTCTGATTCAATCACTATGTTG 59.667 37.037 6.91 0.00 35.06 3.33
1195 4084 7.389232 TGACAGTCTGATTCAATCACTATGTT 58.611 34.615 6.91 0.00 35.06 2.71
1196 4085 6.939622 TGACAGTCTGATTCAATCACTATGT 58.060 36.000 6.91 1.36 35.06 2.29
1197 4086 7.838771 TTGACAGTCTGATTCAATCACTATG 57.161 36.000 6.91 0.00 35.06 2.23
1198 4087 9.107177 GATTTGACAGTCTGATTCAATCACTAT 57.893 33.333 6.91 0.00 35.06 2.12
1199 4088 7.550551 GGATTTGACAGTCTGATTCAATCACTA 59.449 37.037 6.91 0.00 35.06 2.74
1200 4089 6.373774 GGATTTGACAGTCTGATTCAATCACT 59.626 38.462 6.91 0.00 35.06 3.41
1201 4090 6.373774 AGGATTTGACAGTCTGATTCAATCAC 59.626 38.462 6.91 1.25 35.06 3.06
1202 4091 6.479006 AGGATTTGACAGTCTGATTCAATCA 58.521 36.000 6.91 0.00 37.76 2.57
1203 4092 6.998968 AGGATTTGACAGTCTGATTCAATC 57.001 37.500 6.91 8.20 0.00 2.67
1204 4093 7.551974 CAGTAGGATTTGACAGTCTGATTCAAT 59.448 37.037 6.91 0.00 0.00 2.57
1205 4094 6.875726 CAGTAGGATTTGACAGTCTGATTCAA 59.124 38.462 6.91 4.32 0.00 2.69
1206 4095 6.211384 TCAGTAGGATTTGACAGTCTGATTCA 59.789 38.462 6.91 0.00 0.00 2.57
1207 4096 6.634805 TCAGTAGGATTTGACAGTCTGATTC 58.365 40.000 6.91 0.00 0.00 2.52
1208 4097 6.611613 TCAGTAGGATTTGACAGTCTGATT 57.388 37.500 6.91 0.00 0.00 2.57
1209 4098 6.611613 TTCAGTAGGATTTGACAGTCTGAT 57.388 37.500 6.91 0.00 32.17 2.90
1210 4099 6.030548 CTTCAGTAGGATTTGACAGTCTGA 57.969 41.667 6.91 0.00 0.00 3.27
1225 4114 1.271597 ACTTTGCAGGGCCTTCAGTAG 60.272 52.381 1.32 9.54 0.00 2.57
1226 4115 0.771127 ACTTTGCAGGGCCTTCAGTA 59.229 50.000 1.32 0.00 0.00 2.74
1227 4116 0.771127 TACTTTGCAGGGCCTTCAGT 59.229 50.000 1.32 2.90 0.00 3.41
1228 4117 1.168714 GTACTTTGCAGGGCCTTCAG 58.831 55.000 1.32 0.00 0.00 3.02
1229 4118 0.476338 TGTACTTTGCAGGGCCTTCA 59.524 50.000 1.32 0.76 0.00 3.02
1230 4119 1.541588 CTTGTACTTTGCAGGGCCTTC 59.458 52.381 1.32 0.00 0.00 3.46
1231 4120 1.620822 CTTGTACTTTGCAGGGCCTT 58.379 50.000 1.32 0.00 0.00 4.35
1232 4121 0.895559 GCTTGTACTTTGCAGGGCCT 60.896 55.000 0.00 0.00 0.00 5.19
1233 4122 0.895559 AGCTTGTACTTTGCAGGGCC 60.896 55.000 0.00 0.00 0.00 5.80
1234 4123 1.821216 TAGCTTGTACTTTGCAGGGC 58.179 50.000 0.00 0.00 0.00 5.19
1235 4124 3.609853 TCATAGCTTGTACTTTGCAGGG 58.390 45.455 0.00 0.00 0.00 4.45
1236 4125 4.025396 CGATCATAGCTTGTACTTTGCAGG 60.025 45.833 0.00 0.00 0.00 4.85
1237 4126 4.805719 TCGATCATAGCTTGTACTTTGCAG 59.194 41.667 0.00 0.00 0.00 4.41
1238 4127 4.754322 TCGATCATAGCTTGTACTTTGCA 58.246 39.130 0.00 0.00 0.00 4.08
1239 4128 4.318404 GCTCGATCATAGCTTGTACTTTGC 60.318 45.833 9.30 0.00 37.01 3.68
1240 4129 5.321983 GCTCGATCATAGCTTGTACTTTG 57.678 43.478 9.30 0.00 37.01 2.77
1250 4139 2.352617 CCTTCAGGAGCTCGATCATAGC 60.353 54.545 7.83 8.65 40.40 2.97
1251 4140 2.352617 GCCTTCAGGAGCTCGATCATAG 60.353 54.545 7.83 0.26 37.39 2.23
1252 4141 1.615883 GCCTTCAGGAGCTCGATCATA 59.384 52.381 7.83 0.00 37.39 2.15
1253 4142 0.392336 GCCTTCAGGAGCTCGATCAT 59.608 55.000 7.83 0.00 37.39 2.45
1254 4143 0.972471 TGCCTTCAGGAGCTCGATCA 60.972 55.000 7.83 0.00 37.39 2.92
1255 4144 0.392336 ATGCCTTCAGGAGCTCGATC 59.608 55.000 7.83 0.00 37.39 3.69
1256 4145 0.835941 AATGCCTTCAGGAGCTCGAT 59.164 50.000 7.83 0.00 37.39 3.59
1257 4146 0.176680 GAATGCCTTCAGGAGCTCGA 59.823 55.000 7.83 0.00 37.39 4.04
1258 4147 0.177604 AGAATGCCTTCAGGAGCTCG 59.822 55.000 7.83 0.00 37.39 5.03
1259 4148 3.767902 ATAGAATGCCTTCAGGAGCTC 57.232 47.619 4.71 4.71 37.39 4.09
1260 4149 3.969976 TGTATAGAATGCCTTCAGGAGCT 59.030 43.478 4.48 0.00 37.39 4.09
1261 4150 4.039730 TCTGTATAGAATGCCTTCAGGAGC 59.960 45.833 4.48 0.00 37.39 4.70
1262 4151 5.538053 TCTCTGTATAGAATGCCTTCAGGAG 59.462 44.000 4.48 3.05 32.23 3.69
1263 4152 5.303078 GTCTCTGTATAGAATGCCTTCAGGA 59.697 44.000 4.48 0.00 32.23 3.86
1264 4153 5.069648 TGTCTCTGTATAGAATGCCTTCAGG 59.930 44.000 4.48 0.00 33.56 3.86
1265 4154 6.154203 TGTCTCTGTATAGAATGCCTTCAG 57.846 41.667 4.48 0.00 33.56 3.02
1266 4155 6.737720 ATGTCTCTGTATAGAATGCCTTCA 57.262 37.500 4.48 0.00 33.56 3.02
1267 4156 6.364706 CGAATGTCTCTGTATAGAATGCCTTC 59.635 42.308 0.00 0.00 31.21 3.46
1268 4157 6.219473 CGAATGTCTCTGTATAGAATGCCTT 58.781 40.000 0.00 0.00 31.21 4.35
1269 4158 5.777802 CGAATGTCTCTGTATAGAATGCCT 58.222 41.667 0.00 0.00 31.21 4.75
1270 4159 4.387256 GCGAATGTCTCTGTATAGAATGCC 59.613 45.833 0.00 0.00 31.21 4.40
1271 4160 4.387256 GGCGAATGTCTCTGTATAGAATGC 59.613 45.833 0.00 0.00 31.21 3.56
1272 4161 5.532557 TGGCGAATGTCTCTGTATAGAATG 58.467 41.667 0.00 0.00 31.21 2.67
1273 4162 5.303078 ACTGGCGAATGTCTCTGTATAGAAT 59.697 40.000 0.00 0.00 31.21 2.40
1274 4163 4.645136 ACTGGCGAATGTCTCTGTATAGAA 59.355 41.667 0.00 0.00 31.21 2.10
1275 4164 4.207955 ACTGGCGAATGTCTCTGTATAGA 58.792 43.478 0.00 0.00 0.00 1.98
1276 4165 4.576216 ACTGGCGAATGTCTCTGTATAG 57.424 45.455 0.00 0.00 0.00 1.31
1277 4166 5.339008 AAACTGGCGAATGTCTCTGTATA 57.661 39.130 0.00 0.00 0.00 1.47
1278 4167 3.895232 AACTGGCGAATGTCTCTGTAT 57.105 42.857 0.00 0.00 0.00 2.29
1279 4168 3.678056 AAACTGGCGAATGTCTCTGTA 57.322 42.857 0.00 0.00 0.00 2.74
1280 4169 2.550830 AAACTGGCGAATGTCTCTGT 57.449 45.000 0.00 0.00 0.00 3.41
1281 4170 4.259970 CGAATAAACTGGCGAATGTCTCTG 60.260 45.833 0.00 0.00 0.00 3.35
1282 4171 3.865745 CGAATAAACTGGCGAATGTCTCT 59.134 43.478 0.00 0.00 0.00 3.10
1283 4172 3.617263 ACGAATAAACTGGCGAATGTCTC 59.383 43.478 0.00 0.00 0.00 3.36
1284 4173 3.596214 ACGAATAAACTGGCGAATGTCT 58.404 40.909 0.00 0.00 0.00 3.41
1285 4174 3.617263 AGACGAATAAACTGGCGAATGTC 59.383 43.478 0.00 0.00 0.00 3.06
1286 4175 3.596214 AGACGAATAAACTGGCGAATGT 58.404 40.909 0.00 0.00 0.00 2.71
1287 4176 4.600012 AAGACGAATAAACTGGCGAATG 57.400 40.909 0.00 0.00 0.00 2.67
1288 4177 5.416947 ACTAAGACGAATAAACTGGCGAAT 58.583 37.500 0.00 0.00 0.00 3.34
1289 4178 4.813027 ACTAAGACGAATAAACTGGCGAA 58.187 39.130 0.00 0.00 0.00 4.70
1290 4179 4.445452 ACTAAGACGAATAAACTGGCGA 57.555 40.909 0.00 0.00 0.00 5.54
1291 4180 5.526010 AAACTAAGACGAATAAACTGGCG 57.474 39.130 0.00 0.00 0.00 5.69
1324 4213 3.258372 TCTCGAGGAGCAAACACATAGTT 59.742 43.478 13.56 0.00 43.89 2.24
1325 4214 2.826128 TCTCGAGGAGCAAACACATAGT 59.174 45.455 13.56 0.00 0.00 2.12
1326 4215 3.510388 TCTCGAGGAGCAAACACATAG 57.490 47.619 13.56 0.00 0.00 2.23
1327 4216 4.183865 CAATCTCGAGGAGCAAACACATA 58.816 43.478 13.56 0.00 0.00 2.29
1328 4217 3.005554 CAATCTCGAGGAGCAAACACAT 58.994 45.455 13.56 0.00 0.00 3.21
1329 4218 2.224281 ACAATCTCGAGGAGCAAACACA 60.224 45.455 13.56 0.00 0.00 3.72
1330 4219 2.417719 ACAATCTCGAGGAGCAAACAC 58.582 47.619 13.56 0.00 0.00 3.32
1331 4220 2.839486 ACAATCTCGAGGAGCAAACA 57.161 45.000 13.56 0.00 0.00 2.83
1332 4221 6.018669 CCTTATTACAATCTCGAGGAGCAAAC 60.019 42.308 13.56 0.00 0.00 2.93
1333 4222 6.049149 CCTTATTACAATCTCGAGGAGCAAA 58.951 40.000 13.56 2.85 0.00 3.68
1334 4223 5.128827 ACCTTATTACAATCTCGAGGAGCAA 59.871 40.000 13.56 0.35 0.00 3.91
1335 4224 4.649674 ACCTTATTACAATCTCGAGGAGCA 59.350 41.667 13.56 0.00 0.00 4.26
1336 4225 5.203060 ACCTTATTACAATCTCGAGGAGC 57.797 43.478 13.56 0.00 0.00 4.70
1337 4226 5.463724 GCAACCTTATTACAATCTCGAGGAG 59.536 44.000 13.56 5.38 0.00 3.69
1338 4227 5.357257 GCAACCTTATTACAATCTCGAGGA 58.643 41.667 13.56 0.00 0.00 3.71
1339 4228 4.511826 GGCAACCTTATTACAATCTCGAGG 59.488 45.833 13.56 0.00 0.00 4.63
1340 4229 5.659048 GGCAACCTTATTACAATCTCGAG 57.341 43.478 5.93 5.93 0.00 4.04
1367 4256 0.896940 ACTCCCCAATGCAGCAAGTG 60.897 55.000 0.00 0.10 0.00 3.16
1368 4257 0.698238 TACTCCCCAATGCAGCAAGT 59.302 50.000 0.00 0.00 0.00 3.16
1369 4258 1.838112 TTACTCCCCAATGCAGCAAG 58.162 50.000 0.00 0.00 0.00 4.01
1370 4259 2.101783 CATTACTCCCCAATGCAGCAA 58.898 47.619 0.00 0.00 0.00 3.91
1371 4260 1.685803 CCATTACTCCCCAATGCAGCA 60.686 52.381 0.00 0.00 33.00 4.41
1372 4261 1.035139 CCATTACTCCCCAATGCAGC 58.965 55.000 0.00 0.00 33.00 5.25
1373 4262 1.035139 GCCATTACTCCCCAATGCAG 58.965 55.000 0.00 0.00 33.00 4.41
1374 4263 0.396974 GGCCATTACTCCCCAATGCA 60.397 55.000 0.00 0.00 33.00 3.96
1375 4264 0.396974 TGGCCATTACTCCCCAATGC 60.397 55.000 0.00 0.00 33.00 3.56
1376 4265 1.696063 CTGGCCATTACTCCCCAATG 58.304 55.000 5.51 0.00 33.93 2.82
1377 4266 0.557729 CCTGGCCATTACTCCCCAAT 59.442 55.000 5.51 0.00 0.00 3.16
1378 4267 0.849094 ACCTGGCCATTACTCCCCAA 60.849 55.000 5.51 0.00 0.00 4.12
1379 4268 0.045008 TACCTGGCCATTACTCCCCA 59.955 55.000 5.51 0.00 0.00 4.96
1380 4269 0.472898 GTACCTGGCCATTACTCCCC 59.527 60.000 5.51 0.00 0.00 4.81
1381 4270 0.472898 GGTACCTGGCCATTACTCCC 59.527 60.000 19.24 7.38 0.00 4.30
1382 4271 1.416772 GAGGTACCTGGCCATTACTCC 59.583 57.143 22.10 13.01 0.00 3.85
1383 4272 2.116238 TGAGGTACCTGGCCATTACTC 58.884 52.381 22.10 16.17 0.00 2.59
1384 4273 1.838077 GTGAGGTACCTGGCCATTACT 59.162 52.381 22.10 9.25 0.00 2.24
1385 4274 1.134189 GGTGAGGTACCTGGCCATTAC 60.134 57.143 22.10 11.12 46.51 1.89
1386 4275 1.209621 GGTGAGGTACCTGGCCATTA 58.790 55.000 22.10 0.00 46.51 1.90
1387 4276 1.999346 GGTGAGGTACCTGGCCATT 59.001 57.895 22.10 0.00 46.51 3.16
1388 4277 3.741325 GGTGAGGTACCTGGCCAT 58.259 61.111 22.10 0.00 46.51 4.40
1403 4292 2.660064 GCCTCCATCCACAGACGGT 61.660 63.158 0.00 0.00 0.00 4.83
1404 4293 2.187946 GCCTCCATCCACAGACGG 59.812 66.667 0.00 0.00 0.00 4.79
1405 4294 1.153489 CAGCCTCCATCCACAGACG 60.153 63.158 0.00 0.00 0.00 4.18
1406 4295 0.392193 CACAGCCTCCATCCACAGAC 60.392 60.000 0.00 0.00 0.00 3.51
1407 4296 1.985614 CACAGCCTCCATCCACAGA 59.014 57.895 0.00 0.00 0.00 3.41
1408 4297 1.748122 GCACAGCCTCCATCCACAG 60.748 63.158 0.00 0.00 0.00 3.66
1409 4298 2.352422 GCACAGCCTCCATCCACA 59.648 61.111 0.00 0.00 0.00 4.17
1410 4299 2.439156 GGCACAGCCTCCATCCAC 60.439 66.667 0.00 0.00 46.69 4.02
1420 4309 1.261619 GCATACATCGTTAGGCACAGC 59.738 52.381 0.00 0.00 0.00 4.40
1421 4310 1.522676 CGCATACATCGTTAGGCACAG 59.477 52.381 0.00 0.00 0.00 3.66
1422 4311 1.134936 ACGCATACATCGTTAGGCACA 60.135 47.619 0.00 0.00 36.72 4.57
1423 4312 1.257936 CACGCATACATCGTTAGGCAC 59.742 52.381 0.00 0.00 38.19 5.01
1424 4313 1.134936 ACACGCATACATCGTTAGGCA 60.135 47.619 0.00 0.00 38.19 4.75
1425 4314 1.567504 ACACGCATACATCGTTAGGC 58.432 50.000 0.00 0.00 38.19 3.93
1426 4315 2.284150 CCAACACGCATACATCGTTAGG 59.716 50.000 0.00 0.00 38.19 2.69
1427 4316 2.927477 ACCAACACGCATACATCGTTAG 59.073 45.455 0.00 0.00 38.19 2.34
1428 4317 2.668945 CACCAACACGCATACATCGTTA 59.331 45.455 0.00 0.00 38.19 3.18
1429 4318 1.463056 CACCAACACGCATACATCGTT 59.537 47.619 0.00 0.00 38.19 3.85
1430 4319 1.075542 CACCAACACGCATACATCGT 58.924 50.000 0.00 0.00 41.28 3.73
1431 4320 0.373370 CCACCAACACGCATACATCG 59.627 55.000 0.00 0.00 0.00 3.84
1432 4321 0.098728 GCCACCAACACGCATACATC 59.901 55.000 0.00 0.00 0.00 3.06
1433 4322 1.312371 GGCCACCAACACGCATACAT 61.312 55.000 0.00 0.00 0.00 2.29
1434 4323 1.969064 GGCCACCAACACGCATACA 60.969 57.895 0.00 0.00 0.00 2.29
1435 4324 1.922135 CTGGCCACCAACACGCATAC 61.922 60.000 0.00 0.00 30.80 2.39
1436 4325 1.673993 CTGGCCACCAACACGCATA 60.674 57.895 0.00 0.00 30.80 3.14
1437 4326 2.985282 CTGGCCACCAACACGCAT 60.985 61.111 0.00 0.00 30.80 4.73
1441 4330 2.672996 ATCGCTGGCCACCAACAC 60.673 61.111 0.00 0.00 30.80 3.32
1442 4331 2.672651 CATCGCTGGCCACCAACA 60.673 61.111 0.00 0.00 30.80 3.33
1443 4332 2.672996 ACATCGCTGGCCACCAAC 60.673 61.111 0.00 0.00 30.80 3.77
1444 4333 2.359850 GACATCGCTGGCCACCAA 60.360 61.111 0.00 0.00 30.80 3.67
1445 4334 4.758251 CGACATCGCTGGCCACCA 62.758 66.667 0.00 0.00 0.00 4.17
1455 4344 1.446792 AACTGGCTCAGCGACATCG 60.447 57.895 0.00 0.00 43.27 3.84
1456 4345 0.390340 TCAACTGGCTCAGCGACATC 60.390 55.000 0.00 0.00 34.37 3.06
1457 4346 0.390866 CTCAACTGGCTCAGCGACAT 60.391 55.000 0.00 0.00 34.37 3.06
1458 4347 1.005748 CTCAACTGGCTCAGCGACA 60.006 57.895 0.00 0.00 34.37 4.35
1459 4348 0.243907 TACTCAACTGGCTCAGCGAC 59.756 55.000 0.00 0.00 34.37 5.19
1460 4349 0.966179 TTACTCAACTGGCTCAGCGA 59.034 50.000 0.00 0.00 34.37 4.93
1461 4350 1.071605 GTTACTCAACTGGCTCAGCG 58.928 55.000 0.00 0.00 34.37 5.18
1462 4351 1.071605 CGTTACTCAACTGGCTCAGC 58.928 55.000 0.00 0.00 34.37 4.26
1463 4352 1.673033 CCCGTTACTCAACTGGCTCAG 60.673 57.143 1.16 1.16 33.03 3.35
1464 4353 0.320374 CCCGTTACTCAACTGGCTCA 59.680 55.000 0.00 0.00 33.03 4.26
1465 4354 0.606604 TCCCGTTACTCAACTGGCTC 59.393 55.000 0.00 0.00 38.54 4.70
1466 4355 1.207329 GATCCCGTTACTCAACTGGCT 59.793 52.381 0.00 0.00 38.54 4.75
1467 4356 1.653151 GATCCCGTTACTCAACTGGC 58.347 55.000 0.00 0.00 38.54 4.85
1468 4357 1.553248 TGGATCCCGTTACTCAACTGG 59.447 52.381 9.90 0.00 39.66 4.00
1469 4358 3.262420 CTTGGATCCCGTTACTCAACTG 58.738 50.000 9.90 0.00 32.09 3.16
1470 4359 2.904434 ACTTGGATCCCGTTACTCAACT 59.096 45.455 9.90 0.00 32.09 3.16
1471 4360 3.000727 CACTTGGATCCCGTTACTCAAC 58.999 50.000 9.90 0.00 0.00 3.18
1472 4361 2.027561 CCACTTGGATCCCGTTACTCAA 60.028 50.000 9.90 0.00 37.39 3.02
1473 4362 1.553248 CCACTTGGATCCCGTTACTCA 59.447 52.381 9.90 0.00 37.39 3.41
1474 4363 1.553704 ACCACTTGGATCCCGTTACTC 59.446 52.381 9.90 0.00 38.94 2.59
1475 4364 1.652947 ACCACTTGGATCCCGTTACT 58.347 50.000 9.90 0.00 38.94 2.24
1476 4365 2.353323 GAACCACTTGGATCCCGTTAC 58.647 52.381 9.90 0.00 38.94 2.50
1477 4366 2.773993 GAACCACTTGGATCCCGTTA 57.226 50.000 9.90 0.00 38.94 3.18
1478 4367 3.644861 GAACCACTTGGATCCCGTT 57.355 52.632 9.90 3.72 38.94 4.44
1483 4372 1.351017 TGACCTGGAACCACTTGGATC 59.649 52.381 0.00 0.00 38.94 3.36
1484 4373 1.444933 TGACCTGGAACCACTTGGAT 58.555 50.000 0.00 0.00 38.94 3.41
1485 4374 1.217916 TTGACCTGGAACCACTTGGA 58.782 50.000 0.00 0.00 38.94 3.53
1486 4375 2.065899 TTTGACCTGGAACCACTTGG 57.934 50.000 0.00 0.00 42.17 3.61
1513 4402 8.166726 GGAATGGGGAAAGTCAAGAAGATATAT 58.833 37.037 0.00 0.00 0.00 0.86
1514 4403 7.518188 GGAATGGGGAAAGTCAAGAAGATATA 58.482 38.462 0.00 0.00 0.00 0.86
1636 4822 5.279156 GGAAAGATGAACATTTGGTGAGCTT 60.279 40.000 0.00 0.00 0.00 3.74
1678 5238 2.165301 CGCTCGGGTGGAACGAATC 61.165 63.158 0.00 0.00 40.16 2.52
1873 5433 0.596859 GCTAACCCTACATCGCCGTC 60.597 60.000 0.00 0.00 0.00 4.79
1913 5473 2.307098 ACAAGCTAGCCTTCTCCATTGT 59.693 45.455 12.13 9.90 0.00 2.71
1983 5544 2.579878 GTGGGAGACGAGATCCACA 58.420 57.895 14.31 5.60 46.39 4.17
2010 5571 2.543861 CCTCACAATCGAGGTGGATACG 60.544 54.545 17.02 0.00 46.48 3.06
2051 5612 1.226575 GACGTCCACGATGCGATGA 60.227 57.895 3.51 0.00 43.02 2.92
2086 5649 0.842635 AGGATGAAGATGACCTGCCC 59.157 55.000 0.00 0.00 0.00 5.36
2156 5721 4.536090 TGAGATAGGCAGGAAAGGAAGAAA 59.464 41.667 0.00 0.00 0.00 2.52
2320 5889 3.136626 GGGGCCTAACACTTCAGATACAT 59.863 47.826 0.84 0.00 0.00 2.29
2321 5890 2.504175 GGGGCCTAACACTTCAGATACA 59.496 50.000 0.84 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.