Multiple sequence alignment - TraesCS7B01G161900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G161900 chr7B 100.000 5754 0 0 1 5754 222305368 222299615 0.000000e+00 10626.0
1 TraesCS7B01G161900 chr7A 94.932 5406 171 39 1 5342 262464975 262459609 0.000000e+00 8370.0
2 TraesCS7B01G161900 chr7D 94.315 3659 117 25 1581 5169 246027113 246023476 0.000000e+00 5520.0
3 TraesCS7B01G161900 chr7D 94.664 1593 62 14 1 1588 246029649 246028075 0.000000e+00 2449.0
4 TraesCS7B01G161900 chr7D 86.224 196 10 1 5171 5349 246023345 246023150 4.550000e-46 196.0
5 TraesCS7B01G161900 chr2B 92.086 417 29 3 5340 5754 450783860 450783446 8.310000e-163 584.0
6 TraesCS7B01G161900 chr2A 90.909 88 6 2 5168 5255 609736932 609736847 3.640000e-22 117.0
7 TraesCS7B01G161900 chr2A 89.655 87 7 2 5168 5253 770359168 770359083 6.100000e-20 110.0
8 TraesCS7B01G161900 chr1B 90.805 87 6 2 5168 5254 556993855 556993771 1.310000e-21 115.0
9 TraesCS7B01G161900 chr1B 86.316 95 9 4 5159 5252 44938035 44938126 3.670000e-17 100.0
10 TraesCS7B01G161900 chr6D 89.773 88 6 3 5171 5257 458975446 458975361 6.100000e-20 110.0
11 TraesCS7B01G161900 chr5D 87.778 90 9 2 5165 5254 521674715 521674802 2.840000e-18 104.0
12 TraesCS7B01G161900 chr2D 86.517 89 11 1 5168 5255 506776636 506776548 4.750000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G161900 chr7B 222299615 222305368 5753 True 10626.000000 10626 100.000000 1 5754 1 chr7B.!!$R1 5753
1 TraesCS7B01G161900 chr7A 262459609 262464975 5366 True 8370.000000 8370 94.932000 1 5342 1 chr7A.!!$R1 5341
2 TraesCS7B01G161900 chr7D 246023150 246029649 6499 True 2721.666667 5520 91.734333 1 5349 3 chr7D.!!$R1 5348

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.035317 TCATCACCGCAACTCAAGCT 59.965 50.000 0.00 0.0 0.00 3.74 F
538 540 0.036952 CGACCTGTCAGCCAGAATGT 60.037 55.000 0.00 0.0 44.49 2.71 F
1308 1313 0.466189 GGCCGGGATCATCACACATT 60.466 55.000 2.18 0.0 0.00 2.71 F
1636 2611 0.321298 TTAAGGGCAACTCGGCACTC 60.321 55.000 0.00 0.0 46.85 3.51 F
3042 4097 0.519077 CGAAGAACTTGAGCCTTGCC 59.481 55.000 0.00 0.0 0.00 4.52 F
3187 4242 0.680618 TGCAAAATGTTCTGCAGGGG 59.319 50.000 15.13 0.0 43.44 4.79 F
3612 4672 1.470494 GGCTCAGGTTAGCTTCTTTGC 59.530 52.381 0.00 0.0 42.37 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1274 1279 0.249322 CGGCCAAGTATACCACGAGG 60.249 60.000 2.24 0.0 42.21 4.63 R
1375 1380 1.656652 ACATTCGCATACTGCTGGAC 58.343 50.000 0.00 0.0 42.25 4.02 R
2637 3685 0.960364 GCAAATTCCCCAGAGACGCA 60.960 55.000 0.00 0.0 0.00 5.24 R
3632 4692 1.276989 GTCTATGTTCCCACGACCCAA 59.723 52.381 0.00 0.0 0.00 4.12 R
3895 4961 1.134340 ACTGCCTACGAACACAAACCA 60.134 47.619 0.00 0.0 0.00 3.67 R
4636 5706 1.180029 CAGAGGAATTGGTTGCAGGG 58.820 55.000 0.00 0.0 0.00 4.45 R
5405 6626 0.031917 ATGCCTTGATCATGCCCCAA 60.032 50.000 13.41 0.0 0.00 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 3.815401 GGGATAGAAACCAATCATCACCG 59.185 47.826 0.00 0.00 0.00 4.94
71 72 0.035317 TCATCACCGCAACTCAAGCT 59.965 50.000 0.00 0.00 0.00 3.74
193 194 2.737180 CATATGAGCCGCGACCCT 59.263 61.111 8.23 0.00 0.00 4.34
268 270 2.900546 GGAAGAGTCCAGAAGAACCTGA 59.099 50.000 0.00 0.00 44.26 3.86
273 275 4.100808 AGAGTCCAGAAGAACCTGATATGC 59.899 45.833 0.00 0.00 36.29 3.14
328 330 1.709994 GGGCGAAGAAGGATGGGGAT 61.710 60.000 0.00 0.00 0.00 3.85
528 530 3.025924 ACGGAAGTACGACCTGTCA 57.974 52.632 9.08 0.00 46.88 3.58
538 540 0.036952 CGACCTGTCAGCCAGAATGT 60.037 55.000 0.00 0.00 44.49 2.71
539 541 1.204704 CGACCTGTCAGCCAGAATGTA 59.795 52.381 0.00 0.00 44.49 2.29
664 666 2.582052 ACTTCCTGAAAATGGAACGCA 58.418 42.857 0.00 0.00 38.53 5.24
691 693 2.815211 CGTCAGCCCCACATGTCG 60.815 66.667 0.00 0.00 0.00 4.35
871 874 1.891919 CCACACCCACAACCTGACG 60.892 63.158 0.00 0.00 0.00 4.35
876 879 2.034066 CCACAACCTGACGCCCAT 59.966 61.111 0.00 0.00 0.00 4.00
1062 1067 4.570874 GGAGGAAGCGATGGGGCC 62.571 72.222 0.00 0.00 0.00 5.80
1191 1196 4.084147 CCCGAGGGACCCCAGGTA 62.084 72.222 17.86 0.00 35.25 3.08
1235 1240 1.408702 GCATCTCCACTCCTCTCTCAC 59.591 57.143 0.00 0.00 0.00 3.51
1238 1243 2.274542 TCTCCACTCCTCTCTCACTCT 58.725 52.381 0.00 0.00 0.00 3.24
1239 1244 2.238646 TCTCCACTCCTCTCTCACTCTC 59.761 54.545 0.00 0.00 0.00 3.20
1240 1245 1.988846 TCCACTCCTCTCTCACTCTCA 59.011 52.381 0.00 0.00 0.00 3.27
1241 1246 2.091541 CCACTCCTCTCTCACTCTCAC 58.908 57.143 0.00 0.00 0.00 3.51
1242 1247 2.290896 CCACTCCTCTCTCACTCTCACT 60.291 54.545 0.00 0.00 0.00 3.41
1243 1248 3.009723 CACTCCTCTCTCACTCTCACTC 58.990 54.545 0.00 0.00 0.00 3.51
1244 1249 2.912956 ACTCCTCTCTCACTCTCACTCT 59.087 50.000 0.00 0.00 0.00 3.24
1245 1250 4.081142 CACTCCTCTCTCACTCTCACTCTA 60.081 50.000 0.00 0.00 0.00 2.43
1246 1251 4.081087 ACTCCTCTCTCACTCTCACTCTAC 60.081 50.000 0.00 0.00 0.00 2.59
1258 1263 3.069300 TCTCACTCTACGTCGCTATAGGT 59.931 47.826 1.04 0.00 0.00 3.08
1259 1264 3.388308 TCACTCTACGTCGCTATAGGTC 58.612 50.000 1.04 0.00 0.00 3.85
1274 1279 5.232414 GCTATAGGTCTGTCGTTTGTTCATC 59.768 44.000 1.04 0.00 0.00 2.92
1275 1280 2.767505 AGGTCTGTCGTTTGTTCATCC 58.232 47.619 0.00 0.00 0.00 3.51
1276 1281 2.368875 AGGTCTGTCGTTTGTTCATCCT 59.631 45.455 0.00 0.00 0.00 3.24
1277 1282 2.737252 GGTCTGTCGTTTGTTCATCCTC 59.263 50.000 0.00 0.00 0.00 3.71
1284 1289 3.056393 TCGTTTGTTCATCCTCGTGGTAT 60.056 43.478 2.99 0.00 34.23 2.73
1286 1291 4.266976 CGTTTGTTCATCCTCGTGGTATAC 59.733 45.833 2.99 0.00 34.23 1.47
1306 1311 1.846712 TTGGCCGGGATCATCACACA 61.847 55.000 2.18 0.00 0.00 3.72
1308 1313 0.466189 GGCCGGGATCATCACACATT 60.466 55.000 2.18 0.00 0.00 2.71
1309 1314 0.947244 GCCGGGATCATCACACATTC 59.053 55.000 2.18 0.00 0.00 2.67
1310 1315 1.746861 GCCGGGATCATCACACATTCA 60.747 52.381 2.18 0.00 0.00 2.57
1311 1316 1.942657 CCGGGATCATCACACATTCAC 59.057 52.381 0.00 0.00 0.00 3.18
1312 1317 2.631267 CGGGATCATCACACATTCACA 58.369 47.619 0.00 0.00 0.00 3.58
1313 1318 2.352651 CGGGATCATCACACATTCACAC 59.647 50.000 0.00 0.00 0.00 3.82
1314 1319 3.614092 GGGATCATCACACATTCACACT 58.386 45.455 0.00 0.00 0.00 3.55
1315 1320 4.012374 GGGATCATCACACATTCACACTT 58.988 43.478 0.00 0.00 0.00 3.16
1316 1321 4.142534 GGGATCATCACACATTCACACTTG 60.143 45.833 0.00 0.00 0.00 3.16
1317 1322 4.142534 GGATCATCACACATTCACACTTGG 60.143 45.833 0.00 0.00 0.00 3.61
1318 1323 3.819368 TCATCACACATTCACACTTGGT 58.181 40.909 0.00 0.00 0.00 3.67
1321 1326 3.351740 TCACACATTCACACTTGGTGTT 58.648 40.909 0.19 0.00 45.08 3.32
1322 1327 3.128415 TCACACATTCACACTTGGTGTTG 59.872 43.478 0.19 0.72 45.08 3.33
1323 1328 2.159254 ACACATTCACACTTGGTGTTGC 60.159 45.455 0.19 0.00 45.08 4.17
1324 1329 1.408702 ACATTCACACTTGGTGTTGCC 59.591 47.619 0.19 0.00 45.08 4.52
1325 1330 1.408340 CATTCACACTTGGTGTTGCCA 59.592 47.619 0.19 0.00 45.08 4.92
1350 1355 3.693411 GCCCATTTTTGGCCGAGA 58.307 55.556 0.00 0.00 43.33 4.04
1351 1356 1.215382 GCCCATTTTTGGCCGAGAC 59.785 57.895 0.00 0.00 43.33 3.36
1375 1380 6.095440 ACCTTTTGTTGATTCGATCCTATTGG 59.905 38.462 0.00 0.00 0.00 3.16
1405 1410 2.552599 TGCGAATGTTGGTTCTGGTA 57.447 45.000 0.00 0.00 0.00 3.25
1409 1414 3.998341 GCGAATGTTGGTTCTGGTAACTA 59.002 43.478 0.00 0.00 37.61 2.24
1414 1419 7.448748 AATGTTGGTTCTGGTAACTATTGTC 57.551 36.000 0.00 0.00 37.61 3.18
1435 1440 3.504520 TCCTGGAATTTAGTTTCGTTGGC 59.495 43.478 0.00 0.00 0.00 4.52
1584 1590 2.159099 ACAGACTGAGCGAGTTTGTTCA 60.159 45.455 10.08 0.00 45.49 3.18
1636 2611 0.321298 TTAAGGGCAACTCGGCACTC 60.321 55.000 0.00 0.00 46.85 3.51
1657 2632 6.256321 CACTCAAACTGGAGAACAAAATTTGG 59.744 38.462 10.71 0.00 38.30 3.28
1708 2701 4.783227 AGTCTATGCCAGGGTTTCTCTAAA 59.217 41.667 0.00 0.00 0.00 1.85
1881 2888 3.613910 GCATTTGGCGGTACTTGTGAATT 60.614 43.478 0.00 0.00 0.00 2.17
2158 3181 2.885135 TCTTCATCCAGTGTGCCATT 57.115 45.000 0.00 0.00 0.00 3.16
2326 3349 5.106078 GGTGTTGGTTTTCACTCAAAGTACA 60.106 40.000 0.00 0.00 35.26 2.90
2330 3353 6.618287 TGGTTTTCACTCAAAGTACATCTG 57.382 37.500 0.00 0.00 0.00 2.90
2445 3468 2.609459 ACAGTGCAAGAAGACACTTTCG 59.391 45.455 0.00 0.00 44.59 3.46
2637 3685 5.473039 GCACTTGTTTGCAATTCCTTCTAT 58.527 37.500 0.00 0.00 42.49 1.98
2639 3687 5.346822 CACTTGTTTGCAATTCCTTCTATGC 59.653 40.000 0.00 0.00 39.22 3.14
2926 3978 2.202690 CATGCATTGTGCCCAGCG 60.203 61.111 0.00 0.00 44.23 5.18
2928 3980 1.978080 ATGCATTGTGCCCAGCGAA 60.978 52.632 0.00 0.00 44.23 4.70
3042 4097 0.519077 CGAAGAACTTGAGCCTTGCC 59.481 55.000 0.00 0.00 0.00 4.52
3056 4111 4.718961 AGCCTTGCCGATTAATCTGTATT 58.281 39.130 13.45 0.00 0.00 1.89
3187 4242 0.680618 TGCAAAATGTTCTGCAGGGG 59.319 50.000 15.13 0.00 43.44 4.79
3612 4672 1.470494 GGCTCAGGTTAGCTTCTTTGC 59.530 52.381 0.00 0.00 42.37 3.68
3632 4692 5.199024 TGCTTTGTTCTTGTATGCAACAT 57.801 34.783 0.00 0.00 38.10 2.71
3712 4772 3.563808 TGTAATGCACTGTCCTGTTTGTC 59.436 43.478 0.00 0.00 0.00 3.18
3894 4960 4.706842 CCATTAGTTAGGTATGGTGCCT 57.293 45.455 0.00 0.00 40.00 4.75
3895 4961 5.048846 CCATTAGTTAGGTATGGTGCCTT 57.951 43.478 0.00 0.00 37.54 4.35
3896 4962 4.821805 CCATTAGTTAGGTATGGTGCCTTG 59.178 45.833 0.00 0.00 37.54 3.61
3905 4971 1.494960 ATGGTGCCTTGGTTTGTGTT 58.505 45.000 0.00 0.00 0.00 3.32
3992 5058 8.948401 AACACTAGATATCATGTGAGTAGGAT 57.052 34.615 24.98 7.03 34.81 3.24
4076 5146 8.350722 GGAATTTCGGAGGATTTTATTCCTTAC 58.649 37.037 0.00 0.00 46.35 2.34
4122 5192 5.200483 TGATTTGGAGGATTGGTAACCATC 58.800 41.667 0.00 0.00 31.53 3.51
4123 5193 4.666412 TTTGGAGGATTGGTAACCATCA 57.334 40.909 0.00 0.00 31.53 3.07
4206 5276 5.003804 AGACAACTATGGCAAACACCTAAG 58.996 41.667 0.00 0.00 36.86 2.18
4268 5338 4.552767 CGAACAACTTCTACTTTGTGCCAG 60.553 45.833 0.00 0.00 36.08 4.85
4397 5467 2.837591 TGTGTGGTGCTATCCTACATGT 59.162 45.455 2.69 2.69 0.00 3.21
4594 5664 2.803030 TGTACCTAGACCGAAGCTCT 57.197 50.000 0.00 0.00 0.00 4.09
4615 5685 2.426522 TGTGACACAGGCAATCTAAGC 58.573 47.619 3.56 0.00 0.00 3.09
4636 5706 3.731867 GCGTGAACCACCATGATTTCATC 60.732 47.826 0.00 0.00 33.61 2.92
4643 5713 2.761767 CACCATGATTTCATCCCTGCAA 59.238 45.455 0.00 0.00 33.61 4.08
4957 6027 5.737290 CGAAGTTTTCCTTGTTGTAAGTGTG 59.263 40.000 0.00 0.00 32.03 3.82
5040 6115 5.826208 ACTAATCGTGGTTCTTGTTTTTCCT 59.174 36.000 0.00 0.00 0.00 3.36
5064 6139 7.307632 CCTTGAATTATTTACTCCTCTGCATCG 60.308 40.741 0.00 0.00 0.00 3.84
5169 6244 7.148507 GCTGTCCATTATCTCATTAGCATGTAC 60.149 40.741 0.00 0.00 0.00 2.90
5182 6386 4.993029 AGCATGTACTACCTCTCTGTTC 57.007 45.455 0.00 0.00 0.00 3.18
5223 6427 4.280677 TGGCAGTTTAAATTGAACTCCCAG 59.719 41.667 8.96 0.00 39.43 4.45
5247 6468 7.333423 CAGAACGTCTTATATTTGGGAACAGAA 59.667 37.037 0.00 0.00 44.54 3.02
5254 6475 8.044908 TCTTATATTTGGGAACAGAAGGTGTAC 58.955 37.037 0.00 0.00 44.54 2.90
5264 6485 3.775316 ACAGAAGGTGTACATAGGAAGGG 59.225 47.826 0.00 0.00 37.75 3.95
5276 6497 4.971282 ACATAGGAAGGGATGTCATCTTGA 59.029 41.667 12.54 0.00 30.32 3.02
5342 6563 9.566432 GGACATTTCTAGAATTGGTGATATCTT 57.434 33.333 24.12 6.66 0.00 2.40
5346 6567 8.806429 TTTCTAGAATTGGTGATATCTTTGCA 57.194 30.769 5.89 0.00 0.00 4.08
5349 6570 5.899299 AGAATTGGTGATATCTTTGCAAGC 58.101 37.500 3.98 0.00 0.00 4.01
5350 6571 5.419788 AGAATTGGTGATATCTTTGCAAGCA 59.580 36.000 3.98 0.00 0.00 3.91
5351 6572 4.707030 TTGGTGATATCTTTGCAAGCAG 57.293 40.909 3.98 0.00 0.00 4.24
5352 6573 3.018856 TGGTGATATCTTTGCAAGCAGG 58.981 45.455 3.98 0.00 0.00 4.85
5353 6574 3.019564 GGTGATATCTTTGCAAGCAGGT 58.980 45.455 3.98 0.00 0.00 4.00
5354 6575 3.181493 GGTGATATCTTTGCAAGCAGGTG 60.181 47.826 3.98 0.00 0.00 4.00
5355 6576 2.424601 TGATATCTTTGCAAGCAGGTGC 59.575 45.455 3.98 0.00 45.15 5.01
5361 6582 3.755434 GCAAGCAGGTGCAAGAGT 58.245 55.556 4.48 0.00 44.29 3.24
5362 6583 1.578423 GCAAGCAGGTGCAAGAGTC 59.422 57.895 4.48 0.00 44.29 3.36
5363 6584 1.860484 GCAAGCAGGTGCAAGAGTCC 61.860 60.000 4.48 0.00 44.29 3.85
5364 6585 1.302033 AAGCAGGTGCAAGAGTCCG 60.302 57.895 4.48 0.00 45.16 4.79
5365 6586 2.031163 GCAGGTGCAAGAGTCCGT 59.969 61.111 0.00 0.00 41.59 4.69
5366 6587 2.029844 GCAGGTGCAAGAGTCCGTC 61.030 63.158 0.00 0.00 41.59 4.79
5367 6588 1.734477 CAGGTGCAAGAGTCCGTCG 60.734 63.158 0.00 0.00 0.00 5.12
5368 6589 1.901948 AGGTGCAAGAGTCCGTCGA 60.902 57.895 0.00 0.00 0.00 4.20
5369 6590 1.733399 GGTGCAAGAGTCCGTCGAC 60.733 63.158 5.18 5.18 39.50 4.20
5370 6591 1.733399 GTGCAAGAGTCCGTCGACC 60.733 63.158 10.58 0.00 40.12 4.79
5371 6592 2.197605 TGCAAGAGTCCGTCGACCA 61.198 57.895 10.58 0.00 40.12 4.02
5372 6593 1.733399 GCAAGAGTCCGTCGACCAC 60.733 63.158 10.58 7.09 40.12 4.16
5373 6594 1.080705 CAAGAGTCCGTCGACCACC 60.081 63.158 10.58 0.00 40.12 4.61
5374 6595 1.228490 AAGAGTCCGTCGACCACCT 60.228 57.895 10.58 2.40 40.12 4.00
5375 6596 0.826672 AAGAGTCCGTCGACCACCTT 60.827 55.000 10.58 9.41 40.12 3.50
5376 6597 1.212229 GAGTCCGTCGACCACCTTC 59.788 63.158 10.58 0.00 40.12 3.46
5377 6598 1.228490 AGTCCGTCGACCACCTTCT 60.228 57.895 10.58 0.00 40.12 2.85
5378 6599 1.212229 GTCCGTCGACCACCTTCTC 59.788 63.158 10.58 0.00 32.40 2.87
5379 6600 1.074423 TCCGTCGACCACCTTCTCT 59.926 57.895 10.58 0.00 0.00 3.10
5380 6601 0.538977 TCCGTCGACCACCTTCTCTT 60.539 55.000 10.58 0.00 0.00 2.85
5381 6602 0.109226 CCGTCGACCACCTTCTCTTC 60.109 60.000 10.58 0.00 0.00 2.87
5382 6603 0.596577 CGTCGACCACCTTCTCTTCA 59.403 55.000 10.58 0.00 0.00 3.02
5383 6604 1.000607 CGTCGACCACCTTCTCTTCAA 60.001 52.381 10.58 0.00 0.00 2.69
5384 6605 2.678324 GTCGACCACCTTCTCTTCAAG 58.322 52.381 3.51 0.00 0.00 3.02
5385 6606 2.036089 GTCGACCACCTTCTCTTCAAGT 59.964 50.000 3.51 0.00 0.00 3.16
5386 6607 2.035961 TCGACCACCTTCTCTTCAAGTG 59.964 50.000 0.00 0.00 0.00 3.16
5387 6608 2.224066 CGACCACCTTCTCTTCAAGTGT 60.224 50.000 0.00 0.00 0.00 3.55
5388 6609 3.005472 CGACCACCTTCTCTTCAAGTGTA 59.995 47.826 0.00 0.00 0.00 2.90
5389 6610 4.561105 GACCACCTTCTCTTCAAGTGTAG 58.439 47.826 0.00 0.00 0.00 2.74
5390 6611 3.325135 ACCACCTTCTCTTCAAGTGTAGG 59.675 47.826 9.87 9.87 0.00 3.18
5391 6612 3.325135 CCACCTTCTCTTCAAGTGTAGGT 59.675 47.826 11.02 11.02 34.74 3.08
5392 6613 4.202367 CCACCTTCTCTTCAAGTGTAGGTT 60.202 45.833 13.51 0.03 33.26 3.50
5393 6614 4.991687 CACCTTCTCTTCAAGTGTAGGTTC 59.008 45.833 13.51 0.00 33.26 3.62
5394 6615 4.654262 ACCTTCTCTTCAAGTGTAGGTTCA 59.346 41.667 11.02 0.00 32.31 3.18
5395 6616 5.308237 ACCTTCTCTTCAAGTGTAGGTTCAT 59.692 40.000 11.02 0.00 32.31 2.57
5396 6617 5.641209 CCTTCTCTTCAAGTGTAGGTTCATG 59.359 44.000 4.39 0.00 0.00 3.07
5397 6618 5.152623 TCTCTTCAAGTGTAGGTTCATGG 57.847 43.478 0.00 0.00 0.00 3.66
5398 6619 4.593206 TCTCTTCAAGTGTAGGTTCATGGT 59.407 41.667 0.00 0.00 0.00 3.55
5399 6620 4.894784 TCTTCAAGTGTAGGTTCATGGTC 58.105 43.478 0.00 0.00 0.00 4.02
5400 6621 4.346709 TCTTCAAGTGTAGGTTCATGGTCA 59.653 41.667 0.00 0.00 0.00 4.02
5401 6622 4.271696 TCAAGTGTAGGTTCATGGTCAG 57.728 45.455 0.00 0.00 0.00 3.51
5402 6623 3.901222 TCAAGTGTAGGTTCATGGTCAGA 59.099 43.478 0.00 0.00 0.00 3.27
5403 6624 4.021104 TCAAGTGTAGGTTCATGGTCAGAG 60.021 45.833 0.00 0.00 0.00 3.35
5404 6625 3.511477 AGTGTAGGTTCATGGTCAGAGT 58.489 45.455 0.00 0.00 0.00 3.24
5405 6626 3.904339 AGTGTAGGTTCATGGTCAGAGTT 59.096 43.478 0.00 0.00 0.00 3.01
5406 6627 4.348168 AGTGTAGGTTCATGGTCAGAGTTT 59.652 41.667 0.00 0.00 0.00 2.66
5407 6628 4.452455 GTGTAGGTTCATGGTCAGAGTTTG 59.548 45.833 0.00 0.00 0.00 2.93
5408 6629 3.146104 AGGTTCATGGTCAGAGTTTGG 57.854 47.619 0.00 0.00 0.00 3.28
5409 6630 2.162681 GGTTCATGGTCAGAGTTTGGG 58.837 52.381 0.00 0.00 0.00 4.12
5410 6631 2.162681 GTTCATGGTCAGAGTTTGGGG 58.837 52.381 0.00 0.00 0.00 4.96
5411 6632 0.038166 TCATGGTCAGAGTTTGGGGC 59.962 55.000 0.00 0.00 0.00 5.80
5412 6633 0.251297 CATGGTCAGAGTTTGGGGCA 60.251 55.000 0.00 0.00 0.00 5.36
5413 6634 0.706433 ATGGTCAGAGTTTGGGGCAT 59.294 50.000 0.00 0.00 0.00 4.40
5414 6635 0.251297 TGGTCAGAGTTTGGGGCATG 60.251 55.000 0.00 0.00 0.00 4.06
5415 6636 0.038166 GGTCAGAGTTTGGGGCATGA 59.962 55.000 0.00 0.00 0.00 3.07
5416 6637 1.341383 GGTCAGAGTTTGGGGCATGAT 60.341 52.381 0.00 0.00 0.00 2.45
5417 6638 2.019984 GTCAGAGTTTGGGGCATGATC 58.980 52.381 0.00 0.00 0.00 2.92
5418 6639 1.634973 TCAGAGTTTGGGGCATGATCA 59.365 47.619 0.00 0.00 0.00 2.92
5419 6640 2.041485 TCAGAGTTTGGGGCATGATCAA 59.959 45.455 0.00 0.00 0.00 2.57
5420 6641 2.426024 CAGAGTTTGGGGCATGATCAAG 59.574 50.000 0.00 0.00 0.00 3.02
5421 6642 1.753073 GAGTTTGGGGCATGATCAAGG 59.247 52.381 0.00 0.00 0.00 3.61
5422 6643 0.176449 GTTTGGGGCATGATCAAGGC 59.824 55.000 15.50 15.50 0.00 4.35
5423 6644 0.252148 TTTGGGGCATGATCAAGGCA 60.252 50.000 23.59 3.80 0.00 4.75
5424 6645 0.031917 TTGGGGCATGATCAAGGCAT 60.032 50.000 23.59 0.00 0.00 4.40
5425 6646 0.757561 TGGGGCATGATCAAGGCATG 60.758 55.000 23.59 7.77 44.52 4.06
5426 6647 1.469335 GGGGCATGATCAAGGCATGG 61.469 60.000 23.59 0.00 42.53 3.66
5428 6649 2.426651 GCATGATCAAGGCATGGCT 58.573 52.632 17.44 17.44 42.53 4.75
5429 6650 0.032130 GCATGATCAAGGCATGGCTG 59.968 55.000 24.08 16.33 42.53 4.85
5440 6661 2.489040 CATGGCTGCAGCTTGATCA 58.511 52.632 35.82 25.29 41.70 2.92
5441 6662 0.100682 CATGGCTGCAGCTTGATCAC 59.899 55.000 35.82 19.05 41.70 3.06
5442 6663 1.035932 ATGGCTGCAGCTTGATCACC 61.036 55.000 35.82 18.32 41.70 4.02
5443 6664 1.378250 GGCTGCAGCTTGATCACCT 60.378 57.895 35.82 0.00 41.70 4.00
5444 6665 0.964358 GGCTGCAGCTTGATCACCTT 60.964 55.000 35.82 0.00 41.70 3.50
5445 6666 0.170561 GCTGCAGCTTGATCACCTTG 59.829 55.000 31.33 0.00 38.21 3.61
5446 6667 1.817357 CTGCAGCTTGATCACCTTGA 58.183 50.000 0.00 0.00 0.00 3.02
5447 6668 1.467734 CTGCAGCTTGATCACCTTGAC 59.532 52.381 0.00 0.00 0.00 3.18
5448 6669 1.202794 TGCAGCTTGATCACCTTGACA 60.203 47.619 0.00 0.00 0.00 3.58
5449 6670 1.198637 GCAGCTTGATCACCTTGACAC 59.801 52.381 0.00 0.00 0.00 3.67
5450 6671 1.808945 CAGCTTGATCACCTTGACACC 59.191 52.381 0.00 0.00 0.00 4.16
5451 6672 1.701847 AGCTTGATCACCTTGACACCT 59.298 47.619 0.00 0.00 0.00 4.00
5452 6673 2.079925 GCTTGATCACCTTGACACCTC 58.920 52.381 0.00 0.00 0.00 3.85
5453 6674 2.289945 GCTTGATCACCTTGACACCTCT 60.290 50.000 0.00 0.00 0.00 3.69
5454 6675 3.808618 GCTTGATCACCTTGACACCTCTT 60.809 47.826 0.00 0.00 0.00 2.85
5455 6676 3.685139 TGATCACCTTGACACCTCTTC 57.315 47.619 0.00 0.00 0.00 2.87
5456 6677 2.303022 TGATCACCTTGACACCTCTTCC 59.697 50.000 0.00 0.00 0.00 3.46
5457 6678 2.103153 TCACCTTGACACCTCTTCCT 57.897 50.000 0.00 0.00 0.00 3.36
5458 6679 1.694150 TCACCTTGACACCTCTTCCTG 59.306 52.381 0.00 0.00 0.00 3.86
5459 6680 1.059913 ACCTTGACACCTCTTCCTGG 58.940 55.000 0.00 0.00 0.00 4.45
5460 6681 0.322008 CCTTGACACCTCTTCCTGGC 60.322 60.000 0.00 0.00 0.00 4.85
5461 6682 0.397941 CTTGACACCTCTTCCTGGCA 59.602 55.000 0.00 0.00 0.00 4.92
5462 6683 0.108585 TTGACACCTCTTCCTGGCAC 59.891 55.000 0.00 0.00 0.00 5.01
5463 6684 1.003233 GACACCTCTTCCTGGCACC 60.003 63.158 0.00 0.00 0.00 5.01
5464 6685 1.462238 ACACCTCTTCCTGGCACCT 60.462 57.895 0.00 0.00 0.00 4.00
5465 6686 1.298014 CACCTCTTCCTGGCACCTC 59.702 63.158 0.00 0.00 0.00 3.85
5466 6687 1.159664 ACCTCTTCCTGGCACCTCT 59.840 57.895 0.00 0.00 0.00 3.69
5467 6688 0.474660 ACCTCTTCCTGGCACCTCTT 60.475 55.000 0.00 0.00 0.00 2.85
5468 6689 0.695347 CCTCTTCCTGGCACCTCTTT 59.305 55.000 0.00 0.00 0.00 2.52
5469 6690 1.074566 CCTCTTCCTGGCACCTCTTTT 59.925 52.381 0.00 0.00 0.00 2.27
5470 6691 2.157738 CTCTTCCTGGCACCTCTTTTG 58.842 52.381 0.00 0.00 0.00 2.44
5471 6692 1.202927 TCTTCCTGGCACCTCTTTTGG 60.203 52.381 0.00 0.00 0.00 3.28
5472 6693 0.555769 TTCCTGGCACCTCTTTTGGT 59.444 50.000 0.00 0.00 41.77 3.67
5473 6694 0.110486 TCCTGGCACCTCTTTTGGTC 59.890 55.000 0.00 0.00 38.45 4.02
5474 6695 0.895559 CCTGGCACCTCTTTTGGTCC 60.896 60.000 0.00 0.00 38.45 4.46
5475 6696 0.178992 CTGGCACCTCTTTTGGTCCA 60.179 55.000 0.00 0.00 38.45 4.02
5476 6697 0.467290 TGGCACCTCTTTTGGTCCAC 60.467 55.000 0.00 0.00 38.45 4.02
5477 6698 0.178990 GGCACCTCTTTTGGTCCACT 60.179 55.000 0.00 0.00 38.45 4.00
5478 6699 1.073284 GGCACCTCTTTTGGTCCACTA 59.927 52.381 0.00 0.00 38.45 2.74
5479 6700 2.488347 GGCACCTCTTTTGGTCCACTAA 60.488 50.000 0.00 0.00 38.45 2.24
5480 6701 2.814336 GCACCTCTTTTGGTCCACTAAG 59.186 50.000 0.00 0.00 38.45 2.18
5481 6702 3.412386 CACCTCTTTTGGTCCACTAAGG 58.588 50.000 11.30 9.22 38.45 2.69
5482 6703 3.072476 CACCTCTTTTGGTCCACTAAGGA 59.928 47.826 13.29 2.76 46.75 3.36
5496 6717 4.439253 ACTAAGGATTGGTGGATTAGGC 57.561 45.455 0.00 0.00 38.82 3.93
5497 6718 4.047883 ACTAAGGATTGGTGGATTAGGCT 58.952 43.478 0.00 0.00 38.82 4.58
5498 6719 3.584733 AAGGATTGGTGGATTAGGCTC 57.415 47.619 0.00 0.00 0.00 4.70
5499 6720 2.781667 AGGATTGGTGGATTAGGCTCT 58.218 47.619 0.00 0.00 0.00 4.09
5500 6721 2.708325 AGGATTGGTGGATTAGGCTCTC 59.292 50.000 0.00 0.00 0.00 3.20
5501 6722 2.224646 GGATTGGTGGATTAGGCTCTCC 60.225 54.545 8.69 8.69 0.00 3.71
5502 6723 0.830648 TTGGTGGATTAGGCTCTCCG 59.169 55.000 10.47 0.00 37.47 4.63
5503 6724 0.032515 TGGTGGATTAGGCTCTCCGA 60.033 55.000 10.47 0.00 37.47 4.55
5504 6725 0.389757 GGTGGATTAGGCTCTCCGAC 59.610 60.000 10.47 9.46 37.47 4.79
5505 6726 1.112113 GTGGATTAGGCTCTCCGACA 58.888 55.000 10.47 0.00 37.47 4.35
5506 6727 1.480954 GTGGATTAGGCTCTCCGACAA 59.519 52.381 10.47 0.00 37.47 3.18
5507 6728 2.103263 GTGGATTAGGCTCTCCGACAAT 59.897 50.000 10.47 0.00 37.47 2.71
5508 6729 2.771943 TGGATTAGGCTCTCCGACAATT 59.228 45.455 10.47 0.00 37.47 2.32
5509 6730 3.181465 TGGATTAGGCTCTCCGACAATTC 60.181 47.826 10.47 0.00 37.47 2.17
5510 6731 2.981859 TTAGGCTCTCCGACAATTCC 57.018 50.000 0.00 0.00 37.47 3.01
5511 6732 2.160721 TAGGCTCTCCGACAATTCCT 57.839 50.000 0.00 0.00 37.47 3.36
5512 6733 1.280457 AGGCTCTCCGACAATTCCTT 58.720 50.000 0.00 0.00 37.47 3.36
5513 6734 1.065854 AGGCTCTCCGACAATTCCTTG 60.066 52.381 0.00 0.00 36.53 3.61
5514 6735 0.729690 GCTCTCCGACAATTCCTTGC 59.270 55.000 0.00 0.00 35.69 4.01
5515 6736 1.373570 CTCTCCGACAATTCCTTGCC 58.626 55.000 0.00 0.00 35.69 4.52
5516 6737 0.690192 TCTCCGACAATTCCTTGCCA 59.310 50.000 0.00 0.00 35.69 4.92
5517 6738 1.073125 TCTCCGACAATTCCTTGCCAA 59.927 47.619 0.00 0.00 35.69 4.52
5518 6739 1.885887 CTCCGACAATTCCTTGCCAAA 59.114 47.619 0.00 0.00 35.69 3.28
5519 6740 2.493278 CTCCGACAATTCCTTGCCAAAT 59.507 45.455 0.00 0.00 35.69 2.32
5520 6741 3.691575 TCCGACAATTCCTTGCCAAATA 58.308 40.909 0.00 0.00 35.69 1.40
5521 6742 3.694072 TCCGACAATTCCTTGCCAAATAG 59.306 43.478 0.00 0.00 35.69 1.73
5522 6743 3.181487 CCGACAATTCCTTGCCAAATAGG 60.181 47.826 0.00 0.00 41.84 2.57
5523 6744 3.694072 CGACAATTCCTTGCCAAATAGGA 59.306 43.478 0.00 0.00 40.02 2.94
5527 6748 3.825908 TTCCTTGCCAAATAGGAAGGT 57.174 42.857 10.99 0.00 43.74 3.50
5528 6749 3.366052 TCCTTGCCAAATAGGAAGGTC 57.634 47.619 10.99 0.00 41.56 3.85
5529 6750 2.647299 TCCTTGCCAAATAGGAAGGTCA 59.353 45.455 10.99 0.00 41.56 4.02
5530 6751 3.269381 TCCTTGCCAAATAGGAAGGTCAT 59.731 43.478 10.99 0.00 41.56 3.06
5531 6752 3.382546 CCTTGCCAAATAGGAAGGTCATG 59.617 47.826 3.87 0.00 41.22 3.07
5532 6753 3.017048 TGCCAAATAGGAAGGTCATGG 57.983 47.619 0.00 0.00 41.22 3.66
5533 6754 1.683385 GCCAAATAGGAAGGTCATGGC 59.317 52.381 0.00 0.00 44.24 4.40
5534 6755 2.310538 CCAAATAGGAAGGTCATGGCC 58.689 52.381 8.79 8.79 41.22 5.36
5535 6756 2.091665 CCAAATAGGAAGGTCATGGCCT 60.092 50.000 14.79 14.79 41.22 5.19
5536 6757 3.217626 CAAATAGGAAGGTCATGGCCTC 58.782 50.000 21.66 13.02 38.03 4.70
5537 6758 1.439543 ATAGGAAGGTCATGGCCTCC 58.560 55.000 21.66 21.20 38.03 4.30
5538 6759 0.694444 TAGGAAGGTCATGGCCTCCC 60.694 60.000 21.66 18.41 38.03 4.30
5539 6760 2.003548 GGAAGGTCATGGCCTCCCT 61.004 63.158 21.66 3.42 38.03 4.20
5540 6761 1.575447 GGAAGGTCATGGCCTCCCTT 61.575 60.000 21.66 2.96 39.96 3.95
5541 6762 0.394899 GAAGGTCATGGCCTCCCTTG 60.395 60.000 21.66 3.02 37.43 3.61
5542 6763 1.142688 AAGGTCATGGCCTCCCTTGT 61.143 55.000 21.66 0.00 38.03 3.16
5543 6764 1.077429 GGTCATGGCCTCCCTTGTC 60.077 63.158 9.76 0.00 37.50 3.18
5544 6765 1.685224 GTCATGGCCTCCCTTGTCA 59.315 57.895 3.32 0.00 37.50 3.58
5545 6766 0.257039 GTCATGGCCTCCCTTGTCAT 59.743 55.000 3.32 0.00 37.50 3.06
5546 6767 0.256752 TCATGGCCTCCCTTGTCATG 59.743 55.000 3.32 0.00 37.50 3.07
5547 6768 1.076485 ATGGCCTCCCTTGTCATGC 60.076 57.895 3.32 0.00 0.00 4.06
5548 6769 1.578215 ATGGCCTCCCTTGTCATGCT 61.578 55.000 3.32 0.00 0.00 3.79
5549 6770 1.000396 GGCCTCCCTTGTCATGCTT 60.000 57.895 0.00 0.00 0.00 3.91
5550 6771 1.318158 GGCCTCCCTTGTCATGCTTG 61.318 60.000 0.00 0.00 0.00 4.01
5551 6772 1.941999 GCCTCCCTTGTCATGCTTGC 61.942 60.000 0.00 0.00 0.00 4.01
5552 6773 1.318158 CCTCCCTTGTCATGCTTGCC 61.318 60.000 0.00 0.00 0.00 4.52
5553 6774 0.323178 CTCCCTTGTCATGCTTGCCT 60.323 55.000 0.00 0.00 0.00 4.75
5554 6775 0.322816 TCCCTTGTCATGCTTGCCTC 60.323 55.000 0.00 0.00 0.00 4.70
5555 6776 1.318158 CCCTTGTCATGCTTGCCTCC 61.318 60.000 0.00 0.00 0.00 4.30
5556 6777 0.323178 CCTTGTCATGCTTGCCTCCT 60.323 55.000 0.00 0.00 0.00 3.69
5557 6778 0.809385 CTTGTCATGCTTGCCTCCTG 59.191 55.000 0.00 0.00 0.00 3.86
5558 6779 0.609957 TTGTCATGCTTGCCTCCTGG 60.610 55.000 0.00 0.00 0.00 4.45
5559 6780 1.300963 GTCATGCTTGCCTCCTGGA 59.699 57.895 0.00 0.00 34.57 3.86
5560 6781 1.028868 GTCATGCTTGCCTCCTGGAC 61.029 60.000 0.00 0.00 34.57 4.02
5561 6782 1.751927 CATGCTTGCCTCCTGGACC 60.752 63.158 0.00 0.00 34.57 4.46
5562 6783 2.233566 ATGCTTGCCTCCTGGACCA 61.234 57.895 0.00 0.00 34.57 4.02
5563 6784 1.792757 ATGCTTGCCTCCTGGACCAA 61.793 55.000 0.00 0.00 34.57 3.67
5564 6785 1.000396 GCTTGCCTCCTGGACCAAT 60.000 57.895 0.00 0.00 34.57 3.16
5565 6786 1.034292 GCTTGCCTCCTGGACCAATC 61.034 60.000 0.00 0.00 34.57 2.67
5566 6787 0.622665 CTTGCCTCCTGGACCAATCT 59.377 55.000 0.00 0.00 34.57 2.40
5567 6788 0.329261 TTGCCTCCTGGACCAATCTG 59.671 55.000 0.00 0.00 34.57 2.90
5568 6789 0.547471 TGCCTCCTGGACCAATCTGA 60.547 55.000 0.00 0.00 34.57 3.27
5569 6790 0.620556 GCCTCCTGGACCAATCTGAA 59.379 55.000 0.00 0.00 34.57 3.02
5570 6791 1.004745 GCCTCCTGGACCAATCTGAAA 59.995 52.381 0.00 0.00 34.57 2.69
5571 6792 2.357569 GCCTCCTGGACCAATCTGAAAT 60.358 50.000 0.00 0.00 34.57 2.17
5572 6793 3.285484 CCTCCTGGACCAATCTGAAATG 58.715 50.000 0.00 0.00 34.57 2.32
5573 6794 3.054139 CCTCCTGGACCAATCTGAAATGA 60.054 47.826 0.00 0.00 34.57 2.57
5574 6795 4.197750 CTCCTGGACCAATCTGAAATGAG 58.802 47.826 0.00 0.00 0.00 2.90
5575 6796 2.686915 CCTGGACCAATCTGAAATGAGC 59.313 50.000 0.00 0.00 0.00 4.26
5576 6797 2.353889 CTGGACCAATCTGAAATGAGCG 59.646 50.000 0.00 0.00 0.00 5.03
5577 6798 2.027285 TGGACCAATCTGAAATGAGCGA 60.027 45.455 0.00 0.00 0.00 4.93
5578 6799 3.009723 GGACCAATCTGAAATGAGCGAA 58.990 45.455 0.00 0.00 0.00 4.70
5579 6800 3.440173 GGACCAATCTGAAATGAGCGAAA 59.560 43.478 0.00 0.00 0.00 3.46
5580 6801 4.096984 GGACCAATCTGAAATGAGCGAAAT 59.903 41.667 0.00 0.00 0.00 2.17
5581 6802 4.990257 ACCAATCTGAAATGAGCGAAATG 58.010 39.130 0.00 0.00 0.00 2.32
5582 6803 4.460382 ACCAATCTGAAATGAGCGAAATGT 59.540 37.500 0.00 0.00 0.00 2.71
5583 6804 5.047802 ACCAATCTGAAATGAGCGAAATGTT 60.048 36.000 0.00 0.00 0.00 2.71
5584 6805 5.514204 CCAATCTGAAATGAGCGAAATGTTC 59.486 40.000 0.00 0.00 0.00 3.18
5585 6806 5.885230 ATCTGAAATGAGCGAAATGTTCA 57.115 34.783 0.00 0.00 42.35 3.18
5586 6807 5.034554 TCTGAAATGAGCGAAATGTTCAC 57.965 39.130 0.00 0.00 40.87 3.18
5587 6808 3.809234 TGAAATGAGCGAAATGTTCACG 58.191 40.909 0.00 0.00 40.87 4.35
5588 6809 3.249799 TGAAATGAGCGAAATGTTCACGT 59.750 39.130 0.00 0.00 40.87 4.49
5589 6810 3.455619 AATGAGCGAAATGTTCACGTC 57.544 42.857 0.00 0.00 40.87 4.34
5590 6811 2.148916 TGAGCGAAATGTTCACGTCT 57.851 45.000 0.00 0.00 32.32 4.18
5591 6812 2.479837 TGAGCGAAATGTTCACGTCTT 58.520 42.857 0.00 0.00 32.32 3.01
5592 6813 2.475111 TGAGCGAAATGTTCACGTCTTC 59.525 45.455 0.00 0.00 32.32 2.87
5593 6814 2.731976 GAGCGAAATGTTCACGTCTTCT 59.268 45.455 0.00 0.00 0.00 2.85
5594 6815 2.476619 AGCGAAATGTTCACGTCTTCTG 59.523 45.455 0.00 0.00 0.00 3.02
5595 6816 2.221055 GCGAAATGTTCACGTCTTCTGT 59.779 45.455 0.00 0.00 0.00 3.41
5596 6817 3.661936 GCGAAATGTTCACGTCTTCTGTC 60.662 47.826 0.00 0.00 0.00 3.51
5597 6818 3.489416 CGAAATGTTCACGTCTTCTGTCA 59.511 43.478 0.00 0.00 0.00 3.58
5598 6819 4.026062 CGAAATGTTCACGTCTTCTGTCAA 60.026 41.667 0.00 0.00 0.00 3.18
5599 6820 5.501736 CGAAATGTTCACGTCTTCTGTCAAA 60.502 40.000 0.00 0.00 0.00 2.69
5600 6821 5.811399 AATGTTCACGTCTTCTGTCAAAA 57.189 34.783 0.00 0.00 0.00 2.44
5601 6822 4.857871 TGTTCACGTCTTCTGTCAAAAG 57.142 40.909 0.00 0.00 0.00 2.27
5602 6823 4.500127 TGTTCACGTCTTCTGTCAAAAGA 58.500 39.130 0.00 0.00 0.00 2.52
5603 6824 4.932799 TGTTCACGTCTTCTGTCAAAAGAA 59.067 37.500 0.00 0.00 34.68 2.52
5604 6825 5.163893 TGTTCACGTCTTCTGTCAAAAGAAC 60.164 40.000 0.00 0.00 34.68 3.01
5605 6826 3.550275 TCACGTCTTCTGTCAAAAGAACG 59.450 43.478 8.43 8.43 34.68 3.95
5606 6827 2.284417 ACGTCTTCTGTCAAAAGAACGC 59.716 45.455 9.40 0.00 34.68 4.84
5607 6828 2.656632 CGTCTTCTGTCAAAAGAACGCG 60.657 50.000 3.53 3.53 34.68 6.01
5608 6829 1.260561 TCTTCTGTCAAAAGAACGCGC 59.739 47.619 5.73 0.00 32.75 6.86
5609 6830 1.261619 CTTCTGTCAAAAGAACGCGCT 59.738 47.619 5.73 0.00 32.75 5.92
5610 6831 0.581529 TCTGTCAAAAGAACGCGCTG 59.418 50.000 5.73 1.02 0.00 5.18
5611 6832 0.993746 CTGTCAAAAGAACGCGCTGC 60.994 55.000 5.73 0.00 0.00 5.25
5612 6833 1.725973 GTCAAAAGAACGCGCTGCC 60.726 57.895 5.73 0.00 0.00 4.85
5613 6834 2.796617 CAAAAGAACGCGCTGCCG 60.797 61.111 5.73 8.60 37.57 5.69
5614 6835 2.970324 AAAAGAACGCGCTGCCGA 60.970 55.556 5.73 0.00 36.29 5.54
5615 6836 2.325082 AAAAGAACGCGCTGCCGAT 61.325 52.632 5.73 5.44 36.29 4.18
5616 6837 2.513065 AAAAGAACGCGCTGCCGATG 62.513 55.000 5.73 0.00 36.29 3.84
5622 6843 3.567797 GCGCTGCCGATGGTTCTC 61.568 66.667 0.00 0.00 36.29 2.87
5623 6844 2.892425 CGCTGCCGATGGTTCTCC 60.892 66.667 0.00 0.00 36.29 3.71
5624 6845 2.586792 GCTGCCGATGGTTCTCCT 59.413 61.111 0.00 0.00 34.23 3.69
5625 6846 1.823295 GCTGCCGATGGTTCTCCTA 59.177 57.895 0.00 0.00 34.23 2.94
5626 6847 0.249657 GCTGCCGATGGTTCTCCTAG 60.250 60.000 0.00 0.00 34.23 3.02
5627 6848 1.403814 CTGCCGATGGTTCTCCTAGA 58.596 55.000 0.00 0.00 34.23 2.43
5628 6849 1.967066 CTGCCGATGGTTCTCCTAGAT 59.033 52.381 0.00 0.00 34.23 1.98
5629 6850 3.157881 CTGCCGATGGTTCTCCTAGATA 58.842 50.000 0.00 0.00 34.23 1.98
5630 6851 3.572642 TGCCGATGGTTCTCCTAGATAA 58.427 45.455 0.00 0.00 34.23 1.75
5631 6852 4.160329 TGCCGATGGTTCTCCTAGATAAT 58.840 43.478 0.00 0.00 34.23 1.28
5632 6853 4.220821 TGCCGATGGTTCTCCTAGATAATC 59.779 45.833 0.00 0.00 34.23 1.75
5633 6854 4.464597 GCCGATGGTTCTCCTAGATAATCT 59.535 45.833 0.00 0.00 34.23 2.40
5634 6855 5.393678 GCCGATGGTTCTCCTAGATAATCTC 60.394 48.000 0.00 0.00 34.23 2.75
5635 6856 5.712446 CCGATGGTTCTCCTAGATAATCTCA 59.288 44.000 0.00 0.00 34.23 3.27
5636 6857 6.209589 CCGATGGTTCTCCTAGATAATCTCAA 59.790 42.308 0.00 0.00 34.23 3.02
5637 6858 7.312154 CGATGGTTCTCCTAGATAATCTCAAG 58.688 42.308 0.00 0.00 34.23 3.02
5638 6859 7.175816 CGATGGTTCTCCTAGATAATCTCAAGA 59.824 40.741 0.00 0.00 34.23 3.02
5639 6860 8.789767 ATGGTTCTCCTAGATAATCTCAAGAA 57.210 34.615 0.00 0.00 34.23 2.52
5640 6861 8.243961 TGGTTCTCCTAGATAATCTCAAGAAG 57.756 38.462 0.00 0.00 34.23 2.85
5641 6862 8.061920 TGGTTCTCCTAGATAATCTCAAGAAGA 58.938 37.037 0.00 0.00 34.79 2.87
5642 6863 8.919145 GGTTCTCCTAGATAATCTCAAGAAGAA 58.081 37.037 0.00 0.00 37.61 2.52
5645 6866 9.653516 TCTCCTAGATAATCTCAAGAAGAATGT 57.346 33.333 0.00 0.00 37.61 2.71
5646 6867 9.695526 CTCCTAGATAATCTCAAGAAGAATGTG 57.304 37.037 0.00 0.00 37.61 3.21
5647 6868 8.646004 TCCTAGATAATCTCAAGAAGAATGTGG 58.354 37.037 0.00 0.00 37.61 4.17
5648 6869 7.387397 CCTAGATAATCTCAAGAAGAATGTGGC 59.613 40.741 0.00 0.00 37.61 5.01
5649 6870 5.757320 AGATAATCTCAAGAAGAATGTGGCG 59.243 40.000 0.00 0.00 37.61 5.69
5650 6871 1.442769 TCTCAAGAAGAATGTGGCGC 58.557 50.000 0.00 0.00 0.00 6.53
5651 6872 1.002430 TCTCAAGAAGAATGTGGCGCT 59.998 47.619 7.64 0.00 0.00 5.92
5652 6873 1.808945 CTCAAGAAGAATGTGGCGCTT 59.191 47.619 7.64 0.00 0.00 4.68
5653 6874 2.227388 CTCAAGAAGAATGTGGCGCTTT 59.773 45.455 7.64 0.00 0.00 3.51
5654 6875 2.030893 TCAAGAAGAATGTGGCGCTTTG 60.031 45.455 7.64 0.00 0.00 2.77
5655 6876 0.883833 AGAAGAATGTGGCGCTTTGG 59.116 50.000 7.64 0.00 0.00 3.28
5656 6877 0.109132 GAAGAATGTGGCGCTTTGGG 60.109 55.000 7.64 0.00 0.00 4.12
5657 6878 0.827507 AAGAATGTGGCGCTTTGGGT 60.828 50.000 7.64 0.00 0.00 4.51
5658 6879 1.080569 GAATGTGGCGCTTTGGGTG 60.081 57.895 7.64 0.00 0.00 4.61
5659 6880 2.490993 GAATGTGGCGCTTTGGGTGG 62.491 60.000 7.64 0.00 0.00 4.61
5693 6914 3.632643 AAAATTGGGGTCAATGATGCC 57.367 42.857 0.00 0.00 42.29 4.40
5694 6915 1.113788 AATTGGGGTCAATGATGCCG 58.886 50.000 0.00 0.00 42.29 5.69
5695 6916 1.394266 ATTGGGGTCAATGATGCCGC 61.394 55.000 0.84 0.84 41.62 6.53
5696 6917 3.585990 GGGGTCAATGATGCCGCG 61.586 66.667 0.00 0.00 0.00 6.46
5697 6918 2.513666 GGGTCAATGATGCCGCGA 60.514 61.111 8.23 0.00 0.00 5.87
5698 6919 2.537560 GGGTCAATGATGCCGCGAG 61.538 63.158 8.23 0.00 0.00 5.03
5699 6920 1.521457 GGTCAATGATGCCGCGAGA 60.521 57.895 8.23 0.00 0.00 4.04
5700 6921 1.493950 GGTCAATGATGCCGCGAGAG 61.494 60.000 8.23 0.00 0.00 3.20
5701 6922 0.807667 GTCAATGATGCCGCGAGAGT 60.808 55.000 8.23 0.00 0.00 3.24
5702 6923 0.744281 TCAATGATGCCGCGAGAGTA 59.256 50.000 8.23 0.00 0.00 2.59
5703 6924 1.135046 CAATGATGCCGCGAGAGTAG 58.865 55.000 8.23 0.00 0.00 2.57
5704 6925 0.747255 AATGATGCCGCGAGAGTAGT 59.253 50.000 8.23 0.00 0.00 2.73
5705 6926 0.747255 ATGATGCCGCGAGAGTAGTT 59.253 50.000 8.23 0.00 0.00 2.24
5706 6927 0.179137 TGATGCCGCGAGAGTAGTTG 60.179 55.000 8.23 0.00 0.00 3.16
5707 6928 0.100682 GATGCCGCGAGAGTAGTTGA 59.899 55.000 8.23 0.00 0.00 3.18
5708 6929 0.747255 ATGCCGCGAGAGTAGTTGAT 59.253 50.000 8.23 0.00 0.00 2.57
5709 6930 0.530744 TGCCGCGAGAGTAGTTGATT 59.469 50.000 8.23 0.00 0.00 2.57
5710 6931 1.067142 TGCCGCGAGAGTAGTTGATTT 60.067 47.619 8.23 0.00 0.00 2.17
5711 6932 2.000447 GCCGCGAGAGTAGTTGATTTT 59.000 47.619 8.23 0.00 0.00 1.82
5712 6933 2.222819 GCCGCGAGAGTAGTTGATTTTG 60.223 50.000 8.23 0.00 0.00 2.44
5713 6934 2.993899 CCGCGAGAGTAGTTGATTTTGT 59.006 45.455 8.23 0.00 0.00 2.83
5714 6935 3.432252 CCGCGAGAGTAGTTGATTTTGTT 59.568 43.478 8.23 0.00 0.00 2.83
5715 6936 4.434330 CCGCGAGAGTAGTTGATTTTGTTC 60.434 45.833 8.23 0.00 0.00 3.18
5716 6937 4.434330 CGCGAGAGTAGTTGATTTTGTTCC 60.434 45.833 0.00 0.00 0.00 3.62
5717 6938 4.434330 GCGAGAGTAGTTGATTTTGTTCCG 60.434 45.833 0.00 0.00 0.00 4.30
5718 6939 4.684703 CGAGAGTAGTTGATTTTGTTCCGT 59.315 41.667 0.00 0.00 0.00 4.69
5719 6940 5.860182 CGAGAGTAGTTGATTTTGTTCCGTA 59.140 40.000 0.00 0.00 0.00 4.02
5720 6941 6.033619 CGAGAGTAGTTGATTTTGTTCCGTAG 59.966 42.308 0.00 0.00 0.00 3.51
5739 6960 6.918892 CGTAGGGATGTTGTAATTCATTCA 57.081 37.500 0.00 0.00 0.00 2.57
5740 6961 7.315247 CGTAGGGATGTTGTAATTCATTCAA 57.685 36.000 0.00 0.00 0.00 2.69
5741 6962 7.757526 CGTAGGGATGTTGTAATTCATTCAAA 58.242 34.615 0.00 0.00 0.00 2.69
5742 6963 7.696453 CGTAGGGATGTTGTAATTCATTCAAAC 59.304 37.037 0.00 0.00 0.00 2.93
5743 6964 7.781324 AGGGATGTTGTAATTCATTCAAACT 57.219 32.000 0.00 0.00 0.00 2.66
5744 6965 7.830739 AGGGATGTTGTAATTCATTCAAACTC 58.169 34.615 0.00 0.00 0.00 3.01
5745 6966 7.671398 AGGGATGTTGTAATTCATTCAAACTCT 59.329 33.333 0.00 0.00 0.00 3.24
5746 6967 8.306761 GGGATGTTGTAATTCATTCAAACTCTT 58.693 33.333 0.00 0.00 0.00 2.85
5747 6968 9.696917 GGATGTTGTAATTCATTCAAACTCTTT 57.303 29.630 0.00 0.00 0.00 2.52
5750 6971 9.950680 TGTTGTAATTCATTCAAACTCTTTCTC 57.049 29.630 0.00 0.00 0.00 2.87
5751 6972 9.399403 GTTGTAATTCATTCAAACTCTTTCTCC 57.601 33.333 0.00 0.00 0.00 3.71
5752 6973 8.924511 TGTAATTCATTCAAACTCTTTCTCCT 57.075 30.769 0.00 0.00 0.00 3.69
5753 6974 9.003658 TGTAATTCATTCAAACTCTTTCTCCTC 57.996 33.333 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 5.877564 AGAGTTTAGGATTAGCTTGAGTTGC 59.122 40.000 0.00 0.00 0.00 4.17
71 72 6.168389 GGTTTTCGGTCAGAGTTTAGGATTA 58.832 40.000 0.00 0.00 0.00 1.75
173 174 2.734591 GTCGCGGCTCATATGGGA 59.265 61.111 6.82 0.00 0.00 4.37
193 194 3.390521 AGGGAGCATTCGCCGTCA 61.391 61.111 0.00 0.00 39.83 4.35
528 530 0.912486 GTGGGACCTACATTCTGGCT 59.088 55.000 2.55 0.00 0.00 4.75
691 693 2.167693 TCATGATGTACTTCGTGACCCC 59.832 50.000 23.02 0.00 36.87 4.95
1235 1240 3.676172 CCTATAGCGACGTAGAGTGAGAG 59.324 52.174 0.00 0.00 0.00 3.20
1238 1243 3.069300 AGACCTATAGCGACGTAGAGTGA 59.931 47.826 0.00 0.00 0.00 3.41
1239 1244 3.184783 CAGACCTATAGCGACGTAGAGTG 59.815 52.174 0.00 0.00 0.00 3.51
1240 1245 3.181467 ACAGACCTATAGCGACGTAGAGT 60.181 47.826 0.00 0.00 0.00 3.24
1241 1246 3.391965 ACAGACCTATAGCGACGTAGAG 58.608 50.000 0.00 0.00 0.00 2.43
1242 1247 3.388308 GACAGACCTATAGCGACGTAGA 58.612 50.000 0.00 0.00 0.00 2.59
1243 1248 2.155347 CGACAGACCTATAGCGACGTAG 59.845 54.545 0.00 0.00 0.00 3.51
1244 1249 2.130395 CGACAGACCTATAGCGACGTA 58.870 52.381 0.00 0.00 0.00 3.57
1245 1250 0.935898 CGACAGACCTATAGCGACGT 59.064 55.000 0.00 0.00 0.00 4.34
1246 1251 0.935898 ACGACAGACCTATAGCGACG 59.064 55.000 0.00 0.00 0.00 5.12
1258 1263 2.035449 ACGAGGATGAACAAACGACAGA 59.965 45.455 0.00 0.00 0.00 3.41
1259 1264 2.155732 CACGAGGATGAACAAACGACAG 59.844 50.000 0.00 0.00 0.00 3.51
1274 1279 0.249322 CGGCCAAGTATACCACGAGG 60.249 60.000 2.24 0.00 42.21 4.63
1275 1280 0.249322 CCGGCCAAGTATACCACGAG 60.249 60.000 2.24 0.00 0.00 4.18
1276 1281 1.678598 CCCGGCCAAGTATACCACGA 61.679 60.000 2.24 0.00 0.00 4.35
1277 1282 1.227438 CCCGGCCAAGTATACCACG 60.227 63.158 2.24 0.00 0.00 4.94
1284 1289 0.468226 GTGATGATCCCGGCCAAGTA 59.532 55.000 2.24 0.00 0.00 2.24
1286 1291 1.097547 GTGTGATGATCCCGGCCAAG 61.098 60.000 2.24 0.00 0.00 3.61
1350 1355 6.095440 CCAATAGGATCGAATCAACAAAAGGT 59.905 38.462 0.00 0.00 36.89 3.50
1351 1356 6.095440 ACCAATAGGATCGAATCAACAAAAGG 59.905 38.462 0.00 0.00 38.69 3.11
1375 1380 1.656652 ACATTCGCATACTGCTGGAC 58.343 50.000 0.00 0.00 42.25 4.02
1405 1410 7.664318 ACGAAACTAAATTCCAGGACAATAGTT 59.336 33.333 11.67 11.67 34.55 2.24
1409 1414 6.294508 CCAACGAAACTAAATTCCAGGACAAT 60.295 38.462 0.00 0.00 0.00 2.71
1414 1419 3.366985 GGCCAACGAAACTAAATTCCAGG 60.367 47.826 0.00 0.00 0.00 4.45
1435 1440 3.652274 AGCCATTTCAAACGACAATTGG 58.348 40.909 10.83 0.00 0.00 3.16
1572 1578 2.223249 TGACAAGCTTGAACAAACTCGC 60.223 45.455 32.50 8.57 0.00 5.03
1584 1590 4.884164 GGCTATTCCTACATTGACAAGCTT 59.116 41.667 0.00 0.00 0.00 3.74
1620 2595 2.337879 TTTGAGTGCCGAGTTGCCCT 62.338 55.000 0.00 0.00 0.00 5.19
1636 2611 6.818142 AGAACCAAATTTTGTTCTCCAGTTTG 59.182 34.615 24.63 0.00 30.59 2.93
1657 2632 7.876896 CTCAACTTCTGAGGTAAAGTAGAAC 57.123 40.000 0.00 0.00 46.89 3.01
1682 2675 3.041946 AGAAACCCTGGCATAGACTAGG 58.958 50.000 0.00 0.00 38.01 3.02
1708 2701 5.458041 AACTTCAAGCATAACAGCACATT 57.542 34.783 0.00 0.00 36.85 2.71
1990 3013 5.879223 AGAAGATGCCAGTCAGATAAACAAG 59.121 40.000 0.00 0.00 0.00 3.16
2158 3181 5.127845 TGGAACAAACTGAAGCACCATAAAA 59.872 36.000 0.00 0.00 31.92 1.52
2326 3349 9.345517 CAAACAATCGTCAAATTATGAACAGAT 57.654 29.630 0.00 0.00 40.50 2.90
2330 3353 7.867445 ACCAAACAATCGTCAAATTATGAAC 57.133 32.000 0.00 0.00 40.50 3.18
2445 3468 5.888161 AGTGAATTCAATGTATCCAAGACCC 59.112 40.000 10.35 0.00 0.00 4.46
2637 3685 0.960364 GCAAATTCCCCAGAGACGCA 60.960 55.000 0.00 0.00 0.00 5.24
2639 3687 2.168521 TCTAGCAAATTCCCCAGAGACG 59.831 50.000 0.00 0.00 0.00 4.18
3612 4672 5.406175 CCCAATGTTGCATACAAGAACAAAG 59.594 40.000 5.94 0.00 40.89 2.77
3632 4692 1.276989 GTCTATGTTCCCACGACCCAA 59.723 52.381 0.00 0.00 0.00 4.12
3712 4772 6.106673 ACTCCCAATCAAATAGACTTACACG 58.893 40.000 0.00 0.00 0.00 4.49
3878 4938 2.275466 ACCAAGGCACCATACCTAACT 58.725 47.619 0.00 0.00 36.14 2.24
3891 4957 1.265905 CCTACGAACACAAACCAAGGC 59.734 52.381 0.00 0.00 0.00 4.35
3892 4958 1.265905 GCCTACGAACACAAACCAAGG 59.734 52.381 0.00 0.00 0.00 3.61
3893 4959 1.944024 TGCCTACGAACACAAACCAAG 59.056 47.619 0.00 0.00 0.00 3.61
3894 4960 1.944024 CTGCCTACGAACACAAACCAA 59.056 47.619 0.00 0.00 0.00 3.67
3895 4961 1.134340 ACTGCCTACGAACACAAACCA 60.134 47.619 0.00 0.00 0.00 3.67
3896 4962 1.589803 ACTGCCTACGAACACAAACC 58.410 50.000 0.00 0.00 0.00 3.27
4076 5146 6.038603 TCAAAAGGCTCCAGATGAAATATTCG 59.961 38.462 0.00 0.00 0.00 3.34
4088 5158 2.494870 CCTCCAAATCAAAAGGCTCCAG 59.505 50.000 0.00 0.00 0.00 3.86
4122 5192 9.305925 GCAAAATAGTCCATAGGAAAAATTCTG 57.694 33.333 0.00 0.00 31.38 3.02
4123 5193 9.034800 TGCAAAATAGTCCATAGGAAAAATTCT 57.965 29.630 0.00 0.00 31.38 2.40
4151 5221 6.806668 AAGGGAAAATTCTTTTGGAACTGA 57.193 33.333 0.00 0.00 36.70 3.41
4316 5386 6.154363 TGGCTAAAACCATGGAATAGGAAAAG 59.846 38.462 21.47 4.17 33.75 2.27
4594 5664 2.813754 GCTTAGATTGCCTGTGTCACAA 59.186 45.455 7.18 0.00 0.00 3.33
4615 5685 4.019919 GATGAAATCATGGTGGTTCACG 57.980 45.455 0.00 0.00 44.70 4.35
4636 5706 1.180029 CAGAGGAATTGGTTGCAGGG 58.820 55.000 0.00 0.00 0.00 4.45
4643 5713 3.875369 GCATCACCTTCAGAGGAATTGGT 60.875 47.826 0.00 0.00 46.74 3.67
4957 6027 4.921470 TGTTAAATCGTTGTGCTAGAGC 57.079 40.909 0.00 0.00 42.50 4.09
5040 6115 7.047891 ACGATGCAGAGGAGTAAATAATTCAA 58.952 34.615 0.00 0.00 0.00 2.69
5223 6427 7.201617 CCTTCTGTTCCCAAATATAAGACGTTC 60.202 40.741 0.00 0.00 0.00 3.95
5247 6468 3.967987 GACATCCCTTCCTATGTACACCT 59.032 47.826 0.00 0.00 36.48 4.00
5254 6475 5.303971 GTCAAGATGACATCCCTTCCTATG 58.696 45.833 11.92 0.14 46.22 2.23
5346 6567 1.302033 CGGACTCTTGCACCTGCTT 60.302 57.895 0.00 0.00 42.66 3.91
5349 6570 1.734477 CGACGGACTCTTGCACCTG 60.734 63.158 0.00 0.00 0.00 4.00
5350 6571 1.901948 TCGACGGACTCTTGCACCT 60.902 57.895 0.00 0.00 0.00 4.00
5351 6572 1.733399 GTCGACGGACTCTTGCACC 60.733 63.158 0.00 0.00 40.15 5.01
5352 6573 1.733399 GGTCGACGGACTCTTGCAC 60.733 63.158 9.92 0.00 42.97 4.57
5353 6574 2.197605 TGGTCGACGGACTCTTGCA 61.198 57.895 9.92 0.00 42.97 4.08
5354 6575 1.733399 GTGGTCGACGGACTCTTGC 60.733 63.158 9.92 0.00 42.97 4.01
5355 6576 1.080705 GGTGGTCGACGGACTCTTG 60.081 63.158 9.92 0.00 42.97 3.02
5356 6577 0.826672 AAGGTGGTCGACGGACTCTT 60.827 55.000 9.92 10.73 42.97 2.85
5357 6578 1.228490 AAGGTGGTCGACGGACTCT 60.228 57.895 9.92 5.67 42.97 3.24
5358 6579 1.212229 GAAGGTGGTCGACGGACTC 59.788 63.158 9.92 3.58 42.97 3.36
5359 6580 1.228490 AGAAGGTGGTCGACGGACT 60.228 57.895 9.92 4.05 42.97 3.85
5360 6581 1.212229 GAGAAGGTGGTCGACGGAC 59.788 63.158 9.92 8.59 42.66 4.79
5361 6582 0.538977 AAGAGAAGGTGGTCGACGGA 60.539 55.000 9.92 0.00 0.00 4.69
5362 6583 0.109226 GAAGAGAAGGTGGTCGACGG 60.109 60.000 9.92 0.00 0.00 4.79
5363 6584 0.596577 TGAAGAGAAGGTGGTCGACG 59.403 55.000 9.92 0.00 0.00 5.12
5364 6585 2.036089 ACTTGAAGAGAAGGTGGTCGAC 59.964 50.000 7.13 7.13 0.00 4.20
5365 6586 2.035961 CACTTGAAGAGAAGGTGGTCGA 59.964 50.000 0.00 0.00 0.00 4.20
5366 6587 2.224066 ACACTTGAAGAGAAGGTGGTCG 60.224 50.000 0.00 0.00 0.00 4.79
5367 6588 3.477210 ACACTTGAAGAGAAGGTGGTC 57.523 47.619 0.00 0.00 0.00 4.02
5368 6589 3.325135 CCTACACTTGAAGAGAAGGTGGT 59.675 47.826 0.00 0.00 0.00 4.16
5369 6590 3.325135 ACCTACACTTGAAGAGAAGGTGG 59.675 47.826 13.44 3.67 36.16 4.61
5370 6591 4.608948 ACCTACACTTGAAGAGAAGGTG 57.391 45.455 13.44 0.00 36.16 4.00
5371 6592 4.654262 TGAACCTACACTTGAAGAGAAGGT 59.346 41.667 0.00 5.31 37.80 3.50
5372 6593 5.215252 TGAACCTACACTTGAAGAGAAGG 57.785 43.478 0.00 4.66 32.89 3.46
5373 6594 5.641209 CCATGAACCTACACTTGAAGAGAAG 59.359 44.000 0.00 0.00 0.00 2.85
5374 6595 5.071788 ACCATGAACCTACACTTGAAGAGAA 59.928 40.000 0.00 0.00 0.00 2.87
5375 6596 4.593206 ACCATGAACCTACACTTGAAGAGA 59.407 41.667 0.00 0.00 0.00 3.10
5376 6597 4.899502 ACCATGAACCTACACTTGAAGAG 58.100 43.478 0.00 0.00 0.00 2.85
5377 6598 4.346709 TGACCATGAACCTACACTTGAAGA 59.653 41.667 0.00 0.00 0.00 2.87
5378 6599 4.641396 TGACCATGAACCTACACTTGAAG 58.359 43.478 0.00 0.00 0.00 3.02
5379 6600 4.346709 TCTGACCATGAACCTACACTTGAA 59.653 41.667 0.00 0.00 0.00 2.69
5380 6601 3.901222 TCTGACCATGAACCTACACTTGA 59.099 43.478 0.00 0.00 0.00 3.02
5381 6602 4.248859 CTCTGACCATGAACCTACACTTG 58.751 47.826 0.00 0.00 0.00 3.16
5382 6603 3.904339 ACTCTGACCATGAACCTACACTT 59.096 43.478 0.00 0.00 0.00 3.16
5383 6604 3.511477 ACTCTGACCATGAACCTACACT 58.489 45.455 0.00 0.00 0.00 3.55
5384 6605 3.963428 ACTCTGACCATGAACCTACAC 57.037 47.619 0.00 0.00 0.00 2.90
5385 6606 4.504864 CCAAACTCTGACCATGAACCTACA 60.505 45.833 0.00 0.00 0.00 2.74
5386 6607 4.003648 CCAAACTCTGACCATGAACCTAC 58.996 47.826 0.00 0.00 0.00 3.18
5387 6608 3.009033 CCCAAACTCTGACCATGAACCTA 59.991 47.826 0.00 0.00 0.00 3.08
5388 6609 2.224867 CCCAAACTCTGACCATGAACCT 60.225 50.000 0.00 0.00 0.00 3.50
5389 6610 2.162681 CCCAAACTCTGACCATGAACC 58.837 52.381 0.00 0.00 0.00 3.62
5390 6611 2.162681 CCCCAAACTCTGACCATGAAC 58.837 52.381 0.00 0.00 0.00 3.18
5391 6612 1.547675 GCCCCAAACTCTGACCATGAA 60.548 52.381 0.00 0.00 0.00 2.57
5392 6613 0.038166 GCCCCAAACTCTGACCATGA 59.962 55.000 0.00 0.00 0.00 3.07
5393 6614 0.251297 TGCCCCAAACTCTGACCATG 60.251 55.000 0.00 0.00 0.00 3.66
5394 6615 0.706433 ATGCCCCAAACTCTGACCAT 59.294 50.000 0.00 0.00 0.00 3.55
5395 6616 0.251297 CATGCCCCAAACTCTGACCA 60.251 55.000 0.00 0.00 0.00 4.02
5396 6617 0.038166 TCATGCCCCAAACTCTGACC 59.962 55.000 0.00 0.00 0.00 4.02
5397 6618 2.019984 GATCATGCCCCAAACTCTGAC 58.980 52.381 0.00 0.00 0.00 3.51
5398 6619 1.634973 TGATCATGCCCCAAACTCTGA 59.365 47.619 0.00 0.00 0.00 3.27
5399 6620 2.133281 TGATCATGCCCCAAACTCTG 57.867 50.000 0.00 0.00 0.00 3.35
5400 6621 2.622452 CCTTGATCATGCCCCAAACTCT 60.622 50.000 0.00 0.00 0.00 3.24
5401 6622 1.753073 CCTTGATCATGCCCCAAACTC 59.247 52.381 0.00 0.00 0.00 3.01
5402 6623 1.856629 CCTTGATCATGCCCCAAACT 58.143 50.000 0.00 0.00 0.00 2.66
5403 6624 0.176449 GCCTTGATCATGCCCCAAAC 59.824 55.000 0.00 0.00 0.00 2.93
5404 6625 0.252148 TGCCTTGATCATGCCCCAAA 60.252 50.000 13.41 0.00 0.00 3.28
5405 6626 0.031917 ATGCCTTGATCATGCCCCAA 60.032 50.000 13.41 0.00 0.00 4.12
5406 6627 0.757561 CATGCCTTGATCATGCCCCA 60.758 55.000 13.41 6.37 35.48 4.96
5407 6628 1.469335 CCATGCCTTGATCATGCCCC 61.469 60.000 13.41 1.67 39.83 5.80
5408 6629 2.046938 CCATGCCTTGATCATGCCC 58.953 57.895 13.41 3.72 39.83 5.36
5409 6630 1.113517 AGCCATGCCTTGATCATGCC 61.114 55.000 13.41 0.00 39.83 4.40
5410 6631 0.032130 CAGCCATGCCTTGATCATGC 59.968 55.000 10.06 10.06 39.83 4.06
5422 6643 0.100682 GTGATCAAGCTGCAGCCATG 59.899 55.000 34.39 30.51 43.38 3.66
5423 6644 1.035932 GGTGATCAAGCTGCAGCCAT 61.036 55.000 34.39 23.27 43.38 4.40
5424 6645 1.676635 GGTGATCAAGCTGCAGCCA 60.677 57.895 34.39 21.75 43.38 4.75
5425 6646 0.964358 AAGGTGATCAAGCTGCAGCC 60.964 55.000 34.39 19.29 43.38 4.85
5426 6647 0.170561 CAAGGTGATCAAGCTGCAGC 59.829 55.000 31.53 31.53 36.51 5.25
5427 6648 1.467734 GTCAAGGTGATCAAGCTGCAG 59.532 52.381 10.11 10.11 36.51 4.41
5428 6649 1.202794 TGTCAAGGTGATCAAGCTGCA 60.203 47.619 1.02 0.00 36.51 4.41
5429 6650 1.198637 GTGTCAAGGTGATCAAGCTGC 59.801 52.381 0.00 0.00 36.51 5.25
5430 6651 1.808945 GGTGTCAAGGTGATCAAGCTG 59.191 52.381 0.00 0.00 36.51 4.24
5431 6652 1.701847 AGGTGTCAAGGTGATCAAGCT 59.298 47.619 0.00 0.00 38.63 3.74
5432 6653 2.079925 GAGGTGTCAAGGTGATCAAGC 58.920 52.381 0.00 0.00 0.00 4.01
5433 6654 3.692257 AGAGGTGTCAAGGTGATCAAG 57.308 47.619 0.00 0.00 0.00 3.02
5434 6655 3.244561 GGAAGAGGTGTCAAGGTGATCAA 60.245 47.826 0.00 0.00 0.00 2.57
5435 6656 2.303022 GGAAGAGGTGTCAAGGTGATCA 59.697 50.000 0.00 0.00 0.00 2.92
5436 6657 2.569404 AGGAAGAGGTGTCAAGGTGATC 59.431 50.000 0.00 0.00 0.00 2.92
5437 6658 2.304180 CAGGAAGAGGTGTCAAGGTGAT 59.696 50.000 0.00 0.00 0.00 3.06
5438 6659 1.694150 CAGGAAGAGGTGTCAAGGTGA 59.306 52.381 0.00 0.00 0.00 4.02
5439 6660 1.271054 CCAGGAAGAGGTGTCAAGGTG 60.271 57.143 0.00 0.00 0.00 4.00
5440 6661 1.059913 CCAGGAAGAGGTGTCAAGGT 58.940 55.000 0.00 0.00 0.00 3.50
5441 6662 0.322008 GCCAGGAAGAGGTGTCAAGG 60.322 60.000 0.00 0.00 0.00 3.61
5442 6663 0.397941 TGCCAGGAAGAGGTGTCAAG 59.602 55.000 0.00 0.00 0.00 3.02
5443 6664 0.108585 GTGCCAGGAAGAGGTGTCAA 59.891 55.000 0.00 0.00 0.00 3.18
5444 6665 1.754745 GTGCCAGGAAGAGGTGTCA 59.245 57.895 0.00 0.00 0.00 3.58
5445 6666 1.003233 GGTGCCAGGAAGAGGTGTC 60.003 63.158 0.00 0.00 0.00 3.67
5446 6667 1.462238 AGGTGCCAGGAAGAGGTGT 60.462 57.895 0.00 0.00 0.00 4.16
5447 6668 1.197430 AGAGGTGCCAGGAAGAGGTG 61.197 60.000 0.00 0.00 0.00 4.00
5448 6669 0.474660 AAGAGGTGCCAGGAAGAGGT 60.475 55.000 0.00 0.00 0.00 3.85
5449 6670 0.695347 AAAGAGGTGCCAGGAAGAGG 59.305 55.000 0.00 0.00 0.00 3.69
5450 6671 2.157738 CAAAAGAGGTGCCAGGAAGAG 58.842 52.381 0.00 0.00 0.00 2.85
5451 6672 1.202927 CCAAAAGAGGTGCCAGGAAGA 60.203 52.381 0.00 0.00 0.00 2.87
5452 6673 1.251251 CCAAAAGAGGTGCCAGGAAG 58.749 55.000 0.00 0.00 0.00 3.46
5453 6674 0.555769 ACCAAAAGAGGTGCCAGGAA 59.444 50.000 0.00 0.00 41.30 3.36
5454 6675 0.110486 GACCAAAAGAGGTGCCAGGA 59.890 55.000 0.00 0.00 43.38 3.86
5455 6676 0.895559 GGACCAAAAGAGGTGCCAGG 60.896 60.000 0.00 0.00 43.47 4.45
5456 6677 2.646121 GGACCAAAAGAGGTGCCAG 58.354 57.895 0.00 0.00 43.47 4.85
5457 6678 4.920828 GGACCAAAAGAGGTGCCA 57.079 55.556 0.00 0.00 43.47 4.92
5460 6681 3.072476 TCCTTAGTGGACCAAAAGAGGTG 59.928 47.826 16.13 3.57 43.38 4.00
5461 6682 3.323775 TCCTTAGTGGACCAAAAGAGGT 58.676 45.455 16.13 0.00 46.82 3.85
5474 6695 4.137543 GCCTAATCCACCAATCCTTAGTG 58.862 47.826 0.00 0.00 0.00 2.74
5475 6696 4.047883 AGCCTAATCCACCAATCCTTAGT 58.952 43.478 0.00 0.00 0.00 2.24
5476 6697 4.349342 AGAGCCTAATCCACCAATCCTTAG 59.651 45.833 0.00 0.00 0.00 2.18
5477 6698 4.307259 AGAGCCTAATCCACCAATCCTTA 58.693 43.478 0.00 0.00 0.00 2.69
5478 6699 3.126453 AGAGCCTAATCCACCAATCCTT 58.874 45.455 0.00 0.00 0.00 3.36
5479 6700 2.708325 GAGAGCCTAATCCACCAATCCT 59.292 50.000 0.00 0.00 0.00 3.24
5480 6701 2.224646 GGAGAGCCTAATCCACCAATCC 60.225 54.545 0.00 0.00 35.54 3.01
5481 6702 2.548920 CGGAGAGCCTAATCCACCAATC 60.549 54.545 0.00 0.00 35.14 2.67
5482 6703 1.417890 CGGAGAGCCTAATCCACCAAT 59.582 52.381 0.00 0.00 35.14 3.16
5483 6704 0.830648 CGGAGAGCCTAATCCACCAA 59.169 55.000 0.00 0.00 35.14 3.67
5484 6705 0.032515 TCGGAGAGCCTAATCCACCA 60.033 55.000 0.00 0.00 35.14 4.17
5485 6706 0.389757 GTCGGAGAGCCTAATCCACC 59.610 60.000 0.00 0.00 36.95 4.61
5486 6707 1.112113 TGTCGGAGAGCCTAATCCAC 58.888 55.000 0.00 0.00 36.95 4.02
5487 6708 1.860641 TTGTCGGAGAGCCTAATCCA 58.139 50.000 0.00 0.00 36.95 3.41
5488 6709 3.394719 GAATTGTCGGAGAGCCTAATCC 58.605 50.000 0.00 0.00 36.95 3.01
5489 6710 3.070302 AGGAATTGTCGGAGAGCCTAATC 59.930 47.826 0.00 0.00 36.95 1.75
5490 6711 3.041946 AGGAATTGTCGGAGAGCCTAAT 58.958 45.455 0.00 0.00 36.95 1.73
5491 6712 2.467880 AGGAATTGTCGGAGAGCCTAA 58.532 47.619 0.00 0.00 36.95 2.69
5492 6713 2.160721 AGGAATTGTCGGAGAGCCTA 57.839 50.000 0.00 0.00 36.95 3.93
5493 6714 1.065854 CAAGGAATTGTCGGAGAGCCT 60.066 52.381 0.00 0.00 36.95 4.58
5494 6715 1.373570 CAAGGAATTGTCGGAGAGCC 58.626 55.000 0.00 0.00 36.95 4.70
5495 6716 0.729690 GCAAGGAATTGTCGGAGAGC 59.270 55.000 0.00 0.00 36.95 4.09
5496 6717 1.339055 TGGCAAGGAATTGTCGGAGAG 60.339 52.381 0.00 0.00 36.95 3.20
5497 6718 0.690192 TGGCAAGGAATTGTCGGAGA 59.310 50.000 0.00 0.00 0.00 3.71
5498 6719 1.533625 TTGGCAAGGAATTGTCGGAG 58.466 50.000 0.00 0.00 0.00 4.63
5499 6720 1.988293 TTTGGCAAGGAATTGTCGGA 58.012 45.000 0.00 0.00 0.00 4.55
5500 6721 3.181487 CCTATTTGGCAAGGAATTGTCGG 60.181 47.826 0.00 0.00 34.58 4.79
5501 6722 3.694072 TCCTATTTGGCAAGGAATTGTCG 59.306 43.478 3.91 0.00 38.97 4.35
5502 6723 5.659440 TTCCTATTTGGCAAGGAATTGTC 57.341 39.130 13.81 0.00 44.96 3.18
5508 6729 2.647299 TGACCTTCCTATTTGGCAAGGA 59.353 45.455 16.28 4.24 41.52 3.36
5509 6730 3.085952 TGACCTTCCTATTTGGCAAGG 57.914 47.619 0.00 0.00 43.07 3.61
5510 6731 3.382546 CCATGACCTTCCTATTTGGCAAG 59.617 47.826 0.00 0.00 35.26 4.01
5511 6732 3.364549 CCATGACCTTCCTATTTGGCAA 58.635 45.455 0.00 0.00 35.26 4.52
5512 6733 2.949963 GCCATGACCTTCCTATTTGGCA 60.950 50.000 6.18 0.00 45.75 4.92
5513 6734 1.683385 GCCATGACCTTCCTATTTGGC 59.317 52.381 0.00 0.00 41.09 4.52
5514 6735 2.091665 AGGCCATGACCTTCCTATTTGG 60.092 50.000 5.01 0.00 36.28 3.28
5515 6736 3.217626 GAGGCCATGACCTTCCTATTTG 58.782 50.000 5.01 0.00 41.32 2.32
5516 6737 2.175715 GGAGGCCATGACCTTCCTATTT 59.824 50.000 5.01 0.00 41.32 1.40
5517 6738 1.777272 GGAGGCCATGACCTTCCTATT 59.223 52.381 5.01 0.00 41.32 1.73
5518 6739 1.439543 GGAGGCCATGACCTTCCTAT 58.560 55.000 5.01 0.00 41.32 2.57
5519 6740 2.930935 GGAGGCCATGACCTTCCTA 58.069 57.895 5.01 0.00 41.32 2.94
5520 6741 3.746957 GGAGGCCATGACCTTCCT 58.253 61.111 5.01 0.00 41.32 3.36
5522 6743 0.394899 CAAGGGAGGCCATGACCTTC 60.395 60.000 14.90 0.00 41.17 3.46
5523 6744 1.142688 ACAAGGGAGGCCATGACCTT 61.143 55.000 5.01 10.05 43.77 3.50
5524 6745 1.542375 ACAAGGGAGGCCATGACCT 60.542 57.895 5.01 0.00 45.04 3.85
5525 6746 1.077429 GACAAGGGAGGCCATGACC 60.077 63.158 5.01 0.37 0.00 4.02
5526 6747 0.257039 ATGACAAGGGAGGCCATGAC 59.743 55.000 5.01 0.00 0.00 3.06
5527 6748 0.256752 CATGACAAGGGAGGCCATGA 59.743 55.000 5.01 0.00 37.41 3.07
5528 6749 1.389609 GCATGACAAGGGAGGCCATG 61.390 60.000 5.01 0.00 38.04 3.66
5529 6750 1.076485 GCATGACAAGGGAGGCCAT 60.076 57.895 5.01 0.00 0.00 4.40
5530 6751 1.792757 AAGCATGACAAGGGAGGCCA 61.793 55.000 5.01 0.00 0.00 5.36
5531 6752 1.000396 AAGCATGACAAGGGAGGCC 60.000 57.895 0.00 0.00 0.00 5.19
5532 6753 1.941999 GCAAGCATGACAAGGGAGGC 61.942 60.000 0.00 0.00 0.00 4.70
5533 6754 1.318158 GGCAAGCATGACAAGGGAGG 61.318 60.000 0.00 0.00 33.41 4.30
5534 6755 0.323178 AGGCAAGCATGACAAGGGAG 60.323 55.000 0.00 0.00 36.86 4.30
5535 6756 0.322816 GAGGCAAGCATGACAAGGGA 60.323 55.000 0.00 0.00 36.86 4.20
5536 6757 1.318158 GGAGGCAAGCATGACAAGGG 61.318 60.000 0.00 0.00 36.86 3.95
5537 6758 0.323178 AGGAGGCAAGCATGACAAGG 60.323 55.000 0.00 0.00 36.86 3.61
5538 6759 0.809385 CAGGAGGCAAGCATGACAAG 59.191 55.000 0.00 0.00 36.86 3.16
5539 6760 0.609957 CCAGGAGGCAAGCATGACAA 60.610 55.000 0.00 0.00 36.86 3.18
5540 6761 1.001764 CCAGGAGGCAAGCATGACA 60.002 57.895 0.00 0.00 36.86 3.58
5541 6762 1.028868 GTCCAGGAGGCAAGCATGAC 61.029 60.000 0.00 0.00 33.34 3.06
5542 6763 1.300963 GTCCAGGAGGCAAGCATGA 59.699 57.895 0.00 0.00 33.74 3.07
5543 6764 1.751927 GGTCCAGGAGGCAAGCATG 60.752 63.158 0.00 0.00 33.74 4.06
5544 6765 1.792757 TTGGTCCAGGAGGCAAGCAT 61.793 55.000 0.00 0.00 33.74 3.79
5545 6766 1.792757 ATTGGTCCAGGAGGCAAGCA 61.793 55.000 0.00 0.00 33.74 3.91
5546 6767 1.000396 ATTGGTCCAGGAGGCAAGC 60.000 57.895 0.00 0.00 33.74 4.01
5547 6768 0.622665 AGATTGGTCCAGGAGGCAAG 59.377 55.000 0.00 0.00 33.74 4.01
5548 6769 0.329261 CAGATTGGTCCAGGAGGCAA 59.671 55.000 0.00 0.00 33.74 4.52
5549 6770 0.547471 TCAGATTGGTCCAGGAGGCA 60.547 55.000 0.00 0.00 33.74 4.75
5550 6771 0.620556 TTCAGATTGGTCCAGGAGGC 59.379 55.000 0.00 0.00 33.74 4.70
5551 6772 3.054139 TCATTTCAGATTGGTCCAGGAGG 60.054 47.826 0.00 0.00 0.00 4.30
5552 6773 4.197750 CTCATTTCAGATTGGTCCAGGAG 58.802 47.826 0.00 0.00 0.00 3.69
5553 6774 3.623203 GCTCATTTCAGATTGGTCCAGGA 60.623 47.826 0.00 0.00 0.00 3.86
5554 6775 2.686915 GCTCATTTCAGATTGGTCCAGG 59.313 50.000 0.00 0.00 0.00 4.45
5555 6776 2.353889 CGCTCATTTCAGATTGGTCCAG 59.646 50.000 0.00 0.00 0.00 3.86
5556 6777 2.027285 TCGCTCATTTCAGATTGGTCCA 60.027 45.455 0.00 0.00 0.00 4.02
5557 6778 2.632377 TCGCTCATTTCAGATTGGTCC 58.368 47.619 0.00 0.00 0.00 4.46
5558 6779 4.685169 TTTCGCTCATTTCAGATTGGTC 57.315 40.909 0.00 0.00 0.00 4.02
5559 6780 4.460382 ACATTTCGCTCATTTCAGATTGGT 59.540 37.500 0.00 0.00 0.00 3.67
5560 6781 4.990257 ACATTTCGCTCATTTCAGATTGG 58.010 39.130 0.00 0.00 0.00 3.16
5561 6782 6.033196 GTGAACATTTCGCTCATTTCAGATTG 59.967 38.462 0.00 0.00 37.22 2.67
5562 6783 6.088824 GTGAACATTTCGCTCATTTCAGATT 58.911 36.000 0.00 0.00 37.22 2.40
5563 6784 5.634896 GTGAACATTTCGCTCATTTCAGAT 58.365 37.500 0.00 0.00 37.22 2.90
5564 6785 4.377328 CGTGAACATTTCGCTCATTTCAGA 60.377 41.667 0.00 0.00 38.02 3.27
5565 6786 3.842428 CGTGAACATTTCGCTCATTTCAG 59.158 43.478 0.00 0.00 38.02 3.02
5566 6787 3.249799 ACGTGAACATTTCGCTCATTTCA 59.750 39.130 0.00 0.00 38.02 2.69
5567 6788 3.810373 ACGTGAACATTTCGCTCATTTC 58.190 40.909 0.00 0.00 38.02 2.17
5568 6789 3.498397 AGACGTGAACATTTCGCTCATTT 59.502 39.130 0.00 0.00 38.02 2.32
5569 6790 3.067106 AGACGTGAACATTTCGCTCATT 58.933 40.909 0.00 0.00 38.02 2.57
5570 6791 2.688507 AGACGTGAACATTTCGCTCAT 58.311 42.857 0.00 0.00 38.02 2.90
5571 6792 2.148916 AGACGTGAACATTTCGCTCA 57.851 45.000 0.00 0.00 38.02 4.26
5572 6793 2.731976 AGAAGACGTGAACATTTCGCTC 59.268 45.455 0.00 0.00 38.02 5.03
5573 6794 2.476619 CAGAAGACGTGAACATTTCGCT 59.523 45.455 0.00 0.00 38.02 4.93
5574 6795 2.221055 ACAGAAGACGTGAACATTTCGC 59.779 45.455 0.00 0.00 36.84 4.70
5575 6796 3.489416 TGACAGAAGACGTGAACATTTCG 59.511 43.478 0.00 0.00 0.00 3.46
5576 6797 5.403897 TTGACAGAAGACGTGAACATTTC 57.596 39.130 0.00 0.00 0.00 2.17
5577 6798 5.811399 TTTGACAGAAGACGTGAACATTT 57.189 34.783 0.00 0.00 0.00 2.32
5578 6799 5.584649 TCTTTTGACAGAAGACGTGAACATT 59.415 36.000 4.37 0.00 0.00 2.71
5579 6800 5.116180 TCTTTTGACAGAAGACGTGAACAT 58.884 37.500 4.37 0.00 0.00 2.71
5580 6801 4.500127 TCTTTTGACAGAAGACGTGAACA 58.500 39.130 4.37 0.00 0.00 3.18
5581 6802 5.256352 GTTCTTTTGACAGAAGACGTGAAC 58.744 41.667 7.89 0.67 33.29 3.18
5582 6803 4.032445 CGTTCTTTTGACAGAAGACGTGAA 59.968 41.667 7.89 0.00 33.29 3.18
5583 6804 3.550275 CGTTCTTTTGACAGAAGACGTGA 59.450 43.478 7.89 0.00 33.29 4.35
5584 6805 3.841372 GCGTTCTTTTGACAGAAGACGTG 60.841 47.826 20.68 11.54 33.29 4.49
5585 6806 2.284417 GCGTTCTTTTGACAGAAGACGT 59.716 45.455 20.68 0.00 33.29 4.34
5586 6807 2.656632 CGCGTTCTTTTGACAGAAGACG 60.657 50.000 17.99 17.99 33.29 4.18
5587 6808 2.892613 CGCGTTCTTTTGACAGAAGAC 58.107 47.619 7.89 3.80 33.29 3.01
5588 6809 1.260561 GCGCGTTCTTTTGACAGAAGA 59.739 47.619 8.43 4.37 33.29 2.87
5589 6810 1.261619 AGCGCGTTCTTTTGACAGAAG 59.738 47.619 8.43 0.00 33.29 2.85
5590 6811 1.003972 CAGCGCGTTCTTTTGACAGAA 60.004 47.619 8.43 0.00 0.00 3.02
5591 6812 0.581529 CAGCGCGTTCTTTTGACAGA 59.418 50.000 8.43 0.00 0.00 3.41
5592 6813 0.993746 GCAGCGCGTTCTTTTGACAG 60.994 55.000 8.43 0.00 0.00 3.51
5593 6814 1.010125 GCAGCGCGTTCTTTTGACA 60.010 52.632 8.43 0.00 0.00 3.58
5594 6815 1.725973 GGCAGCGCGTTCTTTTGAC 60.726 57.895 8.43 0.00 0.00 3.18
5595 6816 2.637025 GGCAGCGCGTTCTTTTGA 59.363 55.556 8.43 0.00 0.00 2.69
5596 6817 2.513065 ATCGGCAGCGCGTTCTTTTG 62.513 55.000 8.43 0.00 0.00 2.44
5597 6818 2.325082 ATCGGCAGCGCGTTCTTTT 61.325 52.632 8.43 0.00 0.00 2.27
5598 6819 2.742372 ATCGGCAGCGCGTTCTTT 60.742 55.556 8.43 0.00 0.00 2.52
5599 6820 3.490759 CATCGGCAGCGCGTTCTT 61.491 61.111 8.43 0.00 0.00 2.52
5605 6826 3.567797 GAGAACCATCGGCAGCGC 61.568 66.667 0.00 0.00 0.00 5.92
5606 6827 2.016393 TAGGAGAACCATCGGCAGCG 62.016 60.000 0.00 0.00 38.94 5.18
5607 6828 0.249657 CTAGGAGAACCATCGGCAGC 60.250 60.000 0.00 0.00 38.94 5.25
5608 6829 1.403814 TCTAGGAGAACCATCGGCAG 58.596 55.000 0.00 0.00 38.94 4.85
5609 6830 2.088104 ATCTAGGAGAACCATCGGCA 57.912 50.000 0.00 0.00 38.94 5.69
5610 6831 4.464597 AGATTATCTAGGAGAACCATCGGC 59.535 45.833 0.00 0.00 38.94 5.54
5611 6832 5.712446 TGAGATTATCTAGGAGAACCATCGG 59.288 44.000 0.00 0.00 38.94 4.18
5612 6833 6.825944 TGAGATTATCTAGGAGAACCATCG 57.174 41.667 0.00 0.00 38.94 3.84
5613 6834 8.415950 TCTTGAGATTATCTAGGAGAACCATC 57.584 38.462 0.00 0.00 38.94 3.51
5614 6835 8.789767 TTCTTGAGATTATCTAGGAGAACCAT 57.210 34.615 0.00 0.00 38.94 3.55
5615 6836 8.061920 TCTTCTTGAGATTATCTAGGAGAACCA 58.938 37.037 1.51 0.00 40.97 3.67
5616 6837 8.472007 TCTTCTTGAGATTATCTAGGAGAACC 57.528 38.462 1.51 0.00 40.97 3.62
5619 6840 9.653516 ACATTCTTCTTGAGATTATCTAGGAGA 57.346 33.333 0.00 0.00 41.84 3.71
5620 6841 9.695526 CACATTCTTCTTGAGATTATCTAGGAG 57.304 37.037 0.00 0.00 37.64 3.69
5621 6842 8.646004 CCACATTCTTCTTGAGATTATCTAGGA 58.354 37.037 0.00 0.00 33.49 2.94
5622 6843 7.387397 GCCACATTCTTCTTGAGATTATCTAGG 59.613 40.741 0.00 0.00 33.49 3.02
5623 6844 7.116090 CGCCACATTCTTCTTGAGATTATCTAG 59.884 40.741 0.00 0.00 33.49 2.43
5624 6845 6.925718 CGCCACATTCTTCTTGAGATTATCTA 59.074 38.462 0.00 0.00 33.49 1.98
5625 6846 5.757320 CGCCACATTCTTCTTGAGATTATCT 59.243 40.000 0.00 0.00 33.49 1.98
5626 6847 5.559799 GCGCCACATTCTTCTTGAGATTATC 60.560 44.000 0.00 0.00 33.49 1.75
5627 6848 4.274459 GCGCCACATTCTTCTTGAGATTAT 59.726 41.667 0.00 0.00 33.49 1.28
5628 6849 3.623060 GCGCCACATTCTTCTTGAGATTA 59.377 43.478 0.00 0.00 33.49 1.75
5629 6850 2.421424 GCGCCACATTCTTCTTGAGATT 59.579 45.455 0.00 0.00 33.49 2.40
5630 6851 2.012673 GCGCCACATTCTTCTTGAGAT 58.987 47.619 0.00 0.00 33.49 2.75
5631 6852 1.002430 AGCGCCACATTCTTCTTGAGA 59.998 47.619 2.29 0.00 0.00 3.27
5632 6853 1.446907 AGCGCCACATTCTTCTTGAG 58.553 50.000 2.29 0.00 0.00 3.02
5633 6854 1.896220 AAGCGCCACATTCTTCTTGA 58.104 45.000 2.29 0.00 0.00 3.02
5634 6855 2.322161 CAAAGCGCCACATTCTTCTTG 58.678 47.619 2.29 0.00 0.00 3.02
5635 6856 1.270550 CCAAAGCGCCACATTCTTCTT 59.729 47.619 2.29 0.00 0.00 2.52
5636 6857 0.883833 CCAAAGCGCCACATTCTTCT 59.116 50.000 2.29 0.00 0.00 2.85
5637 6858 0.109132 CCCAAAGCGCCACATTCTTC 60.109 55.000 2.29 0.00 0.00 2.87
5638 6859 0.827507 ACCCAAAGCGCCACATTCTT 60.828 50.000 2.29 0.00 0.00 2.52
5639 6860 1.228552 ACCCAAAGCGCCACATTCT 60.229 52.632 2.29 0.00 0.00 2.40
5640 6861 1.080569 CACCCAAAGCGCCACATTC 60.081 57.895 2.29 0.00 0.00 2.67
5641 6862 2.573083 CCACCCAAAGCGCCACATT 61.573 57.895 2.29 0.00 0.00 2.71
5642 6863 2.990967 CCACCCAAAGCGCCACAT 60.991 61.111 2.29 0.00 0.00 3.21
5650 6871 4.659172 TCCTGCGGCCACCCAAAG 62.659 66.667 2.24 0.00 0.00 2.77
5651 6872 4.659172 CTCCTGCGGCCACCCAAA 62.659 66.667 2.24 0.00 0.00 3.28
5656 6877 2.855514 TTTTTGCTCCTGCGGCCAC 61.856 57.895 2.24 0.00 43.34 5.01
5657 6878 2.520500 TTTTTGCTCCTGCGGCCA 60.521 55.556 2.24 0.00 43.34 5.36
5672 6893 3.619487 CGGCATCATTGACCCCAATTTTT 60.619 43.478 0.00 0.00 40.81 1.94
5673 6894 2.093553 CGGCATCATTGACCCCAATTTT 60.094 45.455 0.00 0.00 40.81 1.82
5674 6895 1.481772 CGGCATCATTGACCCCAATTT 59.518 47.619 0.00 0.00 40.81 1.82
5675 6896 1.113788 CGGCATCATTGACCCCAATT 58.886 50.000 0.00 0.00 40.81 2.32
5676 6897 1.394266 GCGGCATCATTGACCCCAAT 61.394 55.000 0.00 0.00 43.37 3.16
5677 6898 2.051518 GCGGCATCATTGACCCCAA 61.052 57.895 0.00 0.00 36.61 4.12
5678 6899 2.440065 GCGGCATCATTGACCCCA 60.440 61.111 0.00 0.00 0.00 4.96
5679 6900 3.585990 CGCGGCATCATTGACCCC 61.586 66.667 0.00 0.00 0.00 4.95
5680 6901 2.513666 TCGCGGCATCATTGACCC 60.514 61.111 6.13 0.00 0.00 4.46
5681 6902 1.493950 CTCTCGCGGCATCATTGACC 61.494 60.000 6.13 0.00 0.00 4.02
5682 6903 0.807667 ACTCTCGCGGCATCATTGAC 60.808 55.000 6.13 0.00 0.00 3.18
5683 6904 0.744281 TACTCTCGCGGCATCATTGA 59.256 50.000 6.13 0.00 0.00 2.57
5684 6905 1.135046 CTACTCTCGCGGCATCATTG 58.865 55.000 6.13 0.00 0.00 2.82
5685 6906 0.747255 ACTACTCTCGCGGCATCATT 59.253 50.000 6.13 0.00 0.00 2.57
5686 6907 0.747255 AACTACTCTCGCGGCATCAT 59.253 50.000 6.13 0.00 0.00 2.45
5687 6908 0.179137 CAACTACTCTCGCGGCATCA 60.179 55.000 6.13 0.00 0.00 3.07
5688 6909 0.100682 TCAACTACTCTCGCGGCATC 59.899 55.000 6.13 0.00 0.00 3.91
5689 6910 0.747255 ATCAACTACTCTCGCGGCAT 59.253 50.000 6.13 0.00 0.00 4.40
5690 6911 0.530744 AATCAACTACTCTCGCGGCA 59.469 50.000 6.13 0.00 0.00 5.69
5691 6912 1.641577 AAATCAACTACTCTCGCGGC 58.358 50.000 6.13 0.00 0.00 6.53
5692 6913 2.993899 ACAAAATCAACTACTCTCGCGG 59.006 45.455 6.13 0.00 0.00 6.46
5693 6914 4.434330 GGAACAAAATCAACTACTCTCGCG 60.434 45.833 0.00 0.00 0.00 5.87
5694 6915 4.434330 CGGAACAAAATCAACTACTCTCGC 60.434 45.833 0.00 0.00 0.00 5.03
5695 6916 4.684703 ACGGAACAAAATCAACTACTCTCG 59.315 41.667 0.00 0.00 0.00 4.04
5696 6917 6.310711 CCTACGGAACAAAATCAACTACTCTC 59.689 42.308 0.00 0.00 0.00 3.20
5697 6918 6.164176 CCTACGGAACAAAATCAACTACTCT 58.836 40.000 0.00 0.00 0.00 3.24
5698 6919 5.350640 CCCTACGGAACAAAATCAACTACTC 59.649 44.000 0.00 0.00 0.00 2.59
5699 6920 5.012354 TCCCTACGGAACAAAATCAACTACT 59.988 40.000 0.00 0.00 34.19 2.57
5700 6921 5.240121 TCCCTACGGAACAAAATCAACTAC 58.760 41.667 0.00 0.00 34.19 2.73
5701 6922 5.486735 TCCCTACGGAACAAAATCAACTA 57.513 39.130 0.00 0.00 34.19 2.24
5702 6923 4.360951 TCCCTACGGAACAAAATCAACT 57.639 40.909 0.00 0.00 34.19 3.16
5703 6924 4.457949 ACATCCCTACGGAACAAAATCAAC 59.542 41.667 0.00 0.00 43.10 3.18
5704 6925 4.658063 ACATCCCTACGGAACAAAATCAA 58.342 39.130 0.00 0.00 43.10 2.57
5705 6926 4.295141 ACATCCCTACGGAACAAAATCA 57.705 40.909 0.00 0.00 43.10 2.57
5706 6927 4.457949 ACAACATCCCTACGGAACAAAATC 59.542 41.667 0.00 0.00 43.10 2.17
5707 6928 4.403734 ACAACATCCCTACGGAACAAAAT 58.596 39.130 0.00 0.00 43.10 1.82
5708 6929 3.822940 ACAACATCCCTACGGAACAAAA 58.177 40.909 0.00 0.00 43.10 2.44
5709 6930 3.495434 ACAACATCCCTACGGAACAAA 57.505 42.857 0.00 0.00 43.10 2.83
5710 6931 4.620589 TTACAACATCCCTACGGAACAA 57.379 40.909 0.00 0.00 43.10 2.83
5711 6932 4.829872 ATTACAACATCCCTACGGAACA 57.170 40.909 0.00 0.00 43.10 3.18
5712 6933 5.180271 TGAATTACAACATCCCTACGGAAC 58.820 41.667 0.00 0.00 43.10 3.62
5713 6934 5.423704 TGAATTACAACATCCCTACGGAA 57.576 39.130 0.00 0.00 43.10 4.30
5714 6935 5.623956 ATGAATTACAACATCCCTACGGA 57.376 39.130 0.00 0.00 44.33 4.69
5715 6936 5.820423 TGAATGAATTACAACATCCCTACGG 59.180 40.000 0.00 0.00 0.00 4.02
5716 6937 6.918892 TGAATGAATTACAACATCCCTACG 57.081 37.500 0.00 0.00 0.00 3.51
5717 6938 8.739972 AGTTTGAATGAATTACAACATCCCTAC 58.260 33.333 0.00 0.00 0.00 3.18
5718 6939 8.877864 AGTTTGAATGAATTACAACATCCCTA 57.122 30.769 0.00 0.00 0.00 3.53
5719 6940 7.671398 AGAGTTTGAATGAATTACAACATCCCT 59.329 33.333 0.00 0.00 0.00 4.20
5720 6941 7.830739 AGAGTTTGAATGAATTACAACATCCC 58.169 34.615 0.00 0.00 0.00 3.85
5721 6942 9.696917 AAAGAGTTTGAATGAATTACAACATCC 57.303 29.630 0.00 0.00 0.00 3.51
5724 6945 9.950680 GAGAAAGAGTTTGAATGAATTACAACA 57.049 29.630 0.00 0.00 0.00 3.33
5725 6946 9.399403 GGAGAAAGAGTTTGAATGAATTACAAC 57.601 33.333 0.00 0.00 0.00 3.32
5726 6947 9.354673 AGGAGAAAGAGTTTGAATGAATTACAA 57.645 29.630 0.00 0.00 0.00 2.41
5727 6948 8.924511 AGGAGAAAGAGTTTGAATGAATTACA 57.075 30.769 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.