Multiple sequence alignment - TraesCS7B01G161200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G161200 chr7B 100.000 6866 0 0 1 6866 220129159 220136024 0.000000e+00 12680.0
1 TraesCS7B01G161200 chr7B 93.243 370 20 4 6281 6645 641246271 641246640 2.180000e-149 540.0
2 TraesCS7B01G161200 chr7B 98.678 227 3 0 6058 6284 220140881 220141107 2.980000e-108 403.0
3 TraesCS7B01G161200 chr7B 87.611 226 21 4 6647 6866 339091730 339091506 8.840000e-64 255.0
4 TraesCS7B01G161200 chr7D 91.820 6015 305 81 355 6284 244768658 244774570 0.000000e+00 8209.0
5 TraesCS7B01G161200 chr7D 89.686 223 12 7 1 218 244768334 244768550 2.440000e-69 274.0
6 TraesCS7B01G161200 chr7D 94.444 36 2 0 5923 5958 16694278 16694243 1.000000e-03 56.5
7 TraesCS7B01G161200 chr7A 93.989 4176 163 35 1838 5960 260903890 260908030 0.000000e+00 6240.0
8 TraesCS7B01G161200 chr7A 87.201 1422 96 47 363 1759 260902527 260903887 0.000000e+00 1539.0
9 TraesCS7B01G161200 chr7A 91.480 223 11 4 1 218 260902192 260902411 4.030000e-77 300.0
10 TraesCS7B01G161200 chr7A 87.336 229 14 3 6057 6284 260908026 260908240 1.480000e-61 248.0
11 TraesCS7B01G161200 chr4A 93.140 379 16 8 6284 6657 538736539 538736166 1.300000e-151 547.0
12 TraesCS7B01G161200 chr4A 93.140 379 16 8 6284 6657 538739497 538739124 1.300000e-151 547.0
13 TraesCS7B01G161200 chr4A 92.722 371 18 7 6284 6649 538742179 538741813 1.700000e-145 527.0
14 TraesCS7B01G161200 chr4A 91.265 332 22 5 6326 6654 158063225 158063552 4.890000e-121 446.0
15 TraesCS7B01G161200 chr4A 92.377 223 13 3 6647 6866 159601121 159600900 1.440000e-81 315.0
16 TraesCS7B01G161200 chr4A 90.000 50 4 1 6069 6117 273722065 273722016 5.750000e-06 63.9
17 TraesCS7B01G161200 chr4B 93.514 370 19 4 6281 6645 339449359 339449728 4.680000e-151 545.0
18 TraesCS7B01G161200 chr4B 97.156 211 4 1 6658 6866 471350809 471351019 8.470000e-94 355.0
19 TraesCS7B01G161200 chr5A 93.243 370 20 4 6281 6645 119020527 119020896 2.180000e-149 540.0
20 TraesCS7B01G161200 chr5A 89.231 65 7 0 5659 5723 502376912 502376976 1.590000e-11 82.4
21 TraesCS7B01G161200 chr5A 95.745 47 2 0 6281 6327 310042044 310042090 7.380000e-10 76.8
22 TraesCS7B01G161200 chr5D 94.081 321 13 5 6284 6601 490606603 490606286 3.720000e-132 483.0
23 TraesCS7B01G161200 chr5D 90.769 65 6 0 5659 5723 396806764 396806828 3.410000e-13 87.9
24 TraesCS7B01G161200 chr1A 88.509 322 14 4 6329 6647 566693086 566692785 1.090000e-97 368.0
25 TraesCS7B01G161200 chr1A 89.048 210 18 2 6662 6866 498794580 498794371 8.840000e-64 255.0
26 TraesCS7B01G161200 chr1B 97.156 211 4 1 6658 6866 58014058 58014268 8.470000e-94 355.0
27 TraesCS7B01G161200 chr1B 92.929 99 7 0 5956 6054 480761984 480762082 2.000000e-30 145.0
28 TraesCS7B01G161200 chr2A 93.897 213 9 3 6658 6866 680265064 680265276 1.110000e-82 318.0
29 TraesCS7B01G161200 chrUn 91.981 212 14 2 6658 6866 47777456 47777667 1.870000e-75 294.0
30 TraesCS7B01G161200 chrUn 84.889 225 26 7 6649 6866 313850030 313850253 3.220000e-53 220.0
31 TraesCS7B01G161200 chr2B 90.187 214 16 3 6658 6866 535023734 535023521 2.440000e-69 274.0
32 TraesCS7B01G161200 chr2B 91.919 99 8 0 5956 6054 403102845 403102747 9.290000e-29 139.0
33 TraesCS7B01G161200 chr2B 89.157 83 7 1 6284 6364 241141239 241141321 1.220000e-17 102.0
34 TraesCS7B01G161200 chr3B 91.429 105 7 2 5956 6058 421902954 421903058 7.180000e-30 143.0
35 TraesCS7B01G161200 chr3B 90.566 106 9 1 5959 6063 548846845 548846950 9.290000e-29 139.0
36 TraesCS7B01G161200 chr3D 91.262 103 9 0 5952 6054 175405682 175405784 2.580000e-29 141.0
37 TraesCS7B01G161200 chr3D 87.500 120 12 3 5958 6076 603574586 603574469 1.200000e-27 135.0
38 TraesCS7B01G161200 chr2D 92.000 100 8 0 5958 6057 427953772 427953673 2.580000e-29 141.0
39 TraesCS7B01G161200 chr2D 100.000 29 0 0 6088 6116 456324225 456324253 3.000000e-03 54.7
40 TraesCS7B01G161200 chr6B 92.784 97 6 1 5958 6054 57286907 57286812 9.290000e-29 139.0
41 TraesCS7B01G161200 chr5B 91.837 98 8 0 5957 6054 693583800 693583897 3.340000e-28 137.0
42 TraesCS7B01G161200 chr5B 90.769 65 6 0 5659 5723 476802508 476802572 3.410000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G161200 chr7B 220129159 220136024 6865 False 12680.000000 12680 100.000000 1 6866 1 chr7B.!!$F1 6865
1 TraesCS7B01G161200 chr7D 244768334 244774570 6236 False 4241.500000 8209 90.753000 1 6284 2 chr7D.!!$F1 6283
2 TraesCS7B01G161200 chr7A 260902192 260908240 6048 False 2081.750000 6240 90.001500 1 6284 4 chr7A.!!$F1 6283
3 TraesCS7B01G161200 chr4A 538736166 538742179 6013 True 540.333333 547 93.000667 6284 6657 3 chr4A.!!$R3 373

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
489 497 0.035152 ATGGGAGCTGCGACAAATGA 60.035 50.000 0.00 0.0 0.00 2.57 F
709 728 0.036952 CTCAACGGCCACATCAGACT 60.037 55.000 2.24 0.0 0.00 3.24 F
711 730 0.036952 CAACGGCCACATCAGACTCT 60.037 55.000 2.24 0.0 0.00 3.24 F
714 733 0.179116 CGGCCACATCAGACTCTCAG 60.179 60.000 2.24 0.0 0.00 3.35 F
1487 1538 0.240945 GCATGTCCGTTTGTTCAGGG 59.759 55.000 0.00 0.0 0.00 4.45 F
1916 1970 0.247736 GGCTGTGACGTGATCTCCTT 59.752 55.000 0.00 0.0 0.00 3.36 F
1996 2050 0.687354 CTCCAGTTGTGGTAGCCAGT 59.313 55.000 0.00 0.0 45.28 4.00 F
2483 2538 1.131126 CATGCGTTTGATGGACTCACC 59.869 52.381 0.00 0.0 39.54 4.02 F
2717 2775 0.687354 GGAAAGGACTGCTGTCTCCA 59.313 55.000 21.27 0.0 42.54 3.86 F
4212 4273 1.607251 CCGTCTGGAACCAAGGTACAC 60.607 57.143 0.00 0.0 37.49 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1916 1970 0.040058 AGCCAAGGATGAACCATGCA 59.960 50.000 0.00 0.00 42.04 3.96 R
2569 2627 0.475044 AAAGCCCACAACCCTCGTTA 59.525 50.000 0.00 0.00 0.00 3.18 R
2573 2631 1.546029 GATTCAAAGCCCACAACCCTC 59.454 52.381 0.00 0.00 0.00 4.30 R
2682 2740 3.192212 CCTTTCCTTGCCTGAAGTTCATC 59.808 47.826 5.91 2.33 0.00 2.92 R
3283 3341 0.609151 TCCATAACCAACTCGCGGAA 59.391 50.000 6.13 0.00 0.00 4.30 R
3569 3628 0.317854 TATCCTCGTCGATGCTTGCG 60.318 55.000 0.00 0.00 0.00 4.85 R
4278 4345 1.284657 CACATTTGTGTTTTGGCGCA 58.715 45.000 10.83 0.00 40.96 6.09 R
4420 4506 0.616891 CCTTAGGCAACCCGGTTAGT 59.383 55.000 1.43 0.00 35.76 2.24 R
4425 4511 1.749258 GCTTCCTTAGGCAACCCGG 60.749 63.158 0.00 0.00 35.76 5.73 R
6177 6313 0.319083 ACGTACGCTTGGATGTGGAA 59.681 50.000 16.72 0.00 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 48 4.395625 GGAGAAAGATGATGCATCATGGA 58.604 43.478 39.76 16.37 46.84 3.41
47 49 4.215827 GGAGAAAGATGATGCATCATGGAC 59.784 45.833 39.76 27.07 46.84 4.02
48 50 4.788679 AGAAAGATGATGCATCATGGACA 58.211 39.130 39.76 15.87 46.84 4.02
90 92 0.036858 GGACCAGGTTCTCAGTCTGC 60.037 60.000 0.00 0.00 0.00 4.26
116 118 6.037172 CCGGTCTTAGATTTGATACCAAAGTG 59.963 42.308 0.00 0.00 44.53 3.16
139 145 1.894282 GGATCTTAGCCGCCCAAGC 60.894 63.158 0.00 0.00 0.00 4.01
140 146 1.153168 GATCTTAGCCGCCCAAGCA 60.153 57.895 0.00 0.00 39.83 3.91
141 147 1.153086 ATCTTAGCCGCCCAAGCAG 60.153 57.895 0.00 0.00 39.83 4.24
142 148 1.915078 ATCTTAGCCGCCCAAGCAGT 61.915 55.000 0.00 0.00 39.83 4.40
159 165 2.803956 CAGTAGTAGGTCCAGTCCACA 58.196 52.381 0.00 0.00 0.00 4.17
170 176 3.253432 GTCCAGTCCACAGTTTTGAATCC 59.747 47.826 0.00 0.00 0.00 3.01
178 184 4.136796 CACAGTTTTGAATCCAGTCTCCA 58.863 43.478 0.00 0.00 0.00 3.86
187 193 5.256474 TGAATCCAGTCTCCATTTTCTTCC 58.744 41.667 0.00 0.00 0.00 3.46
218 224 2.634453 CAAACAGGCCCCTGAAAAGATT 59.366 45.455 20.59 0.86 46.30 2.40
219 225 2.222227 ACAGGCCCCTGAAAAGATTC 57.778 50.000 20.59 0.00 46.30 2.52
220 226 1.428912 ACAGGCCCCTGAAAAGATTCA 59.571 47.619 20.59 0.00 46.30 2.57
222 228 3.269381 ACAGGCCCCTGAAAAGATTCATA 59.731 43.478 20.59 0.00 46.30 2.15
225 231 4.418190 AGGCCCCTGAAAAGATTCATATCT 59.582 41.667 0.00 0.00 44.29 1.98
261 267 6.683974 TTTTTGATCCTCCTCGAAATCATC 57.316 37.500 0.00 0.00 30.51 2.92
262 268 4.342862 TTGATCCTCCTCGAAATCATCC 57.657 45.455 0.00 0.00 0.00 3.51
263 269 3.308401 TGATCCTCCTCGAAATCATCCA 58.692 45.455 0.00 0.00 0.00 3.41
264 270 3.906218 TGATCCTCCTCGAAATCATCCAT 59.094 43.478 0.00 0.00 0.00 3.41
265 271 4.020751 TGATCCTCCTCGAAATCATCCATC 60.021 45.833 0.00 0.00 0.00 3.51
266 272 3.581101 TCCTCCTCGAAATCATCCATCT 58.419 45.455 0.00 0.00 0.00 2.90
267 273 3.969976 TCCTCCTCGAAATCATCCATCTT 59.030 43.478 0.00 0.00 0.00 2.40
268 274 5.147767 TCCTCCTCGAAATCATCCATCTTA 58.852 41.667 0.00 0.00 0.00 2.10
269 275 5.602561 TCCTCCTCGAAATCATCCATCTTAA 59.397 40.000 0.00 0.00 0.00 1.85
270 276 5.698545 CCTCCTCGAAATCATCCATCTTAAC 59.301 44.000 0.00 0.00 0.00 2.01
271 277 5.289595 TCCTCGAAATCATCCATCTTAACG 58.710 41.667 0.00 0.00 0.00 3.18
272 278 5.068591 TCCTCGAAATCATCCATCTTAACGA 59.931 40.000 0.00 0.00 0.00 3.85
273 279 5.753438 CCTCGAAATCATCCATCTTAACGAA 59.247 40.000 0.00 0.00 0.00 3.85
274 280 6.074088 CCTCGAAATCATCCATCTTAACGAAG 60.074 42.308 0.00 0.00 0.00 3.79
308 314 2.435422 GGTATAGGCTCCTACCGTCTC 58.565 57.143 9.65 0.00 33.69 3.36
310 316 1.150872 ATAGGCTCCTACCGTCTCCT 58.849 55.000 0.00 0.00 33.69 3.69
312 318 0.924823 AGGCTCCTACCGTCTCCTTA 59.075 55.000 0.00 0.00 33.69 2.69
313 319 1.133730 AGGCTCCTACCGTCTCCTTAG 60.134 57.143 0.00 0.00 33.69 2.18
315 321 1.133853 GCTCCTACCGTCTCCTTAGGA 60.134 57.143 0.00 0.00 39.29 2.94
316 322 2.686118 GCTCCTACCGTCTCCTTAGGAA 60.686 54.545 1.41 0.00 40.71 3.36
317 323 3.215975 CTCCTACCGTCTCCTTAGGAAG 58.784 54.545 1.41 0.00 40.71 3.46
318 324 1.682323 CCTACCGTCTCCTTAGGAAGC 59.318 57.143 1.41 0.00 35.28 3.86
322 328 2.035632 CCGTCTCCTTAGGAAGCTGAT 58.964 52.381 1.41 0.00 0.00 2.90
323 329 2.223923 CCGTCTCCTTAGGAAGCTGATG 60.224 54.545 1.41 1.60 0.00 3.07
324 330 2.428890 CGTCTCCTTAGGAAGCTGATGT 59.571 50.000 1.41 0.00 0.00 3.06
327 333 5.221342 CGTCTCCTTAGGAAGCTGATGTTAT 60.221 44.000 1.41 0.00 0.00 1.89
331 337 7.071698 TCTCCTTAGGAAGCTGATGTTATGATT 59.928 37.037 1.41 0.00 0.00 2.57
333 339 7.716998 TCCTTAGGAAGCTGATGTTATGATTTC 59.283 37.037 0.00 0.00 0.00 2.17
334 340 7.718753 CCTTAGGAAGCTGATGTTATGATTTCT 59.281 37.037 0.00 0.00 0.00 2.52
335 341 8.668510 TTAGGAAGCTGATGTTATGATTTCTC 57.331 34.615 0.00 0.00 0.00 2.87
337 343 5.415415 AAGCTGATGTTATGATTTCTCGC 57.585 39.130 0.00 0.00 0.00 5.03
338 344 3.492383 AGCTGATGTTATGATTTCTCGCG 59.508 43.478 0.00 0.00 0.00 5.87
339 345 3.792294 CTGATGTTATGATTTCTCGCGC 58.208 45.455 0.00 0.00 0.00 6.86
340 346 2.218530 TGATGTTATGATTTCTCGCGCG 59.781 45.455 26.76 26.76 0.00 6.86
341 347 1.635844 TGTTATGATTTCTCGCGCGT 58.364 45.000 30.98 10.20 0.00 6.01
342 348 1.323235 TGTTATGATTTCTCGCGCGTG 59.677 47.619 30.98 27.67 0.00 5.34
343 349 0.300491 TTATGATTTCTCGCGCGTGC 59.700 50.000 30.98 11.84 37.91 5.34
361 367 1.580845 GCGTGCAGGCACTTCAGATT 61.581 55.000 25.57 0.00 44.16 2.40
364 370 1.198637 GTGCAGGCACTTCAGATTGAC 59.801 52.381 16.71 0.00 43.12 3.18
380 386 6.486657 TCAGATTGACTCAAGGGTTTAACAAG 59.513 38.462 0.00 0.00 0.00 3.16
392 398 3.340928 GTTTAACAAGGGCGACTATGGT 58.659 45.455 0.00 0.00 0.00 3.55
395 401 3.706600 AACAAGGGCGACTATGGTTTA 57.293 42.857 0.00 0.00 0.00 2.01
409 415 1.173913 GGTTTACATGGTGCTGGTCC 58.826 55.000 0.00 0.00 0.00 4.46
414 420 1.656587 ACATGGTGCTGGTCCTTAGA 58.343 50.000 0.00 0.00 0.00 2.10
417 423 1.222113 GGTGCTGGTCCTTAGAGGC 59.778 63.158 0.00 0.00 34.61 4.70
419 425 0.324943 GTGCTGGTCCTTAGAGGCAA 59.675 55.000 0.00 0.00 34.61 4.52
453 461 7.730364 AACTTTTCAACTGTCATCGATAAGT 57.270 32.000 0.00 0.00 33.08 2.24
459 467 6.120220 TCAACTGTCATCGATAAGTCTAGGA 58.880 40.000 0.00 0.00 0.00 2.94
484 492 1.517361 CAGTATGGGAGCTGCGACA 59.483 57.895 0.00 0.00 0.00 4.35
489 497 0.035152 ATGGGAGCTGCGACAAATGA 60.035 50.000 0.00 0.00 0.00 2.57
507 515 3.966215 CACGTCGGTGGCTCATTT 58.034 55.556 0.00 0.00 40.58 2.32
511 519 0.165944 CGTCGGTGGCTCATTTTGAC 59.834 55.000 0.00 0.00 0.00 3.18
526 534 1.037493 TTGACTGCAGTAGTGGTCGT 58.963 50.000 21.73 0.00 40.53 4.34
527 535 1.037493 TGACTGCAGTAGTGGTCGTT 58.963 50.000 21.73 0.00 40.53 3.85
528 536 1.000607 TGACTGCAGTAGTGGTCGTTC 60.001 52.381 21.73 3.44 40.53 3.95
529 537 1.000607 GACTGCAGTAGTGGTCGTTCA 60.001 52.381 21.73 0.00 40.53 3.18
530 538 1.000163 ACTGCAGTAGTGGTCGTTCAG 60.000 52.381 20.16 0.00 38.49 3.02
531 539 0.319555 TGCAGTAGTGGTCGTTCAGC 60.320 55.000 0.00 0.00 0.00 4.26
532 540 0.038159 GCAGTAGTGGTCGTTCAGCT 60.038 55.000 0.00 0.00 0.00 4.24
533 541 1.201647 GCAGTAGTGGTCGTTCAGCTA 59.798 52.381 0.00 0.00 0.00 3.32
534 542 2.159226 GCAGTAGTGGTCGTTCAGCTAT 60.159 50.000 0.00 0.00 0.00 2.97
535 543 3.696898 CAGTAGTGGTCGTTCAGCTATC 58.303 50.000 0.00 0.00 0.00 2.08
536 544 3.378742 CAGTAGTGGTCGTTCAGCTATCT 59.621 47.826 0.00 0.00 0.00 1.98
537 545 4.575236 CAGTAGTGGTCGTTCAGCTATCTA 59.425 45.833 0.00 0.00 0.00 1.98
538 546 4.817464 AGTAGTGGTCGTTCAGCTATCTAG 59.183 45.833 0.00 0.00 0.00 2.43
539 547 2.952978 AGTGGTCGTTCAGCTATCTAGG 59.047 50.000 0.00 0.00 0.00 3.02
540 548 1.681793 TGGTCGTTCAGCTATCTAGGC 59.318 52.381 0.00 0.00 0.00 3.93
541 549 1.681793 GGTCGTTCAGCTATCTAGGCA 59.318 52.381 0.00 0.00 0.00 4.75
542 550 2.544069 GGTCGTTCAGCTATCTAGGCAC 60.544 54.545 0.00 0.00 0.00 5.01
543 551 1.681793 TCGTTCAGCTATCTAGGCACC 59.318 52.381 0.00 0.00 0.00 5.01
544 552 1.683917 CGTTCAGCTATCTAGGCACCT 59.316 52.381 0.00 0.00 0.00 4.00
545 553 2.287909 CGTTCAGCTATCTAGGCACCTC 60.288 54.545 0.00 0.00 0.00 3.85
554 562 5.336849 GCTATCTAGGCACCTCGATGTAATT 60.337 44.000 12.68 0.00 32.03 1.40
558 566 4.701956 AGGCACCTCGATGTAATTTTTG 57.298 40.909 0.00 0.00 0.00 2.44
566 574 8.849490 CACCTCGATGTAATTTTTGTTATGTTG 58.151 33.333 0.00 0.00 0.00 3.33
580 592 6.007936 TGTTATGTTGGATGTGCTTTGTAC 57.992 37.500 0.00 0.00 0.00 2.90
584 596 5.590530 TGTTGGATGTGCTTTGTACTTTT 57.409 34.783 0.00 0.00 0.00 2.27
585 597 5.587289 TGTTGGATGTGCTTTGTACTTTTC 58.413 37.500 0.00 0.00 0.00 2.29
586 598 5.126222 TGTTGGATGTGCTTTGTACTTTTCA 59.874 36.000 0.00 0.00 0.00 2.69
589 601 7.517614 TGGATGTGCTTTGTACTTTTCATTA 57.482 32.000 0.00 0.00 0.00 1.90
686 705 3.071312 ACAAGTCGGTACATTAACCACCA 59.929 43.478 0.00 0.00 39.71 4.17
696 715 0.881159 TTAACCACCACCGCTCAACG 60.881 55.000 0.00 0.00 43.15 4.10
705 724 2.741985 CGCTCAACGGCCACATCA 60.742 61.111 2.24 0.00 38.44 3.07
706 725 2.743752 CGCTCAACGGCCACATCAG 61.744 63.158 2.24 0.00 38.44 2.90
707 726 1.375908 GCTCAACGGCCACATCAGA 60.376 57.895 2.24 0.00 0.00 3.27
708 727 1.639298 GCTCAACGGCCACATCAGAC 61.639 60.000 2.24 0.00 0.00 3.51
709 728 0.036952 CTCAACGGCCACATCAGACT 60.037 55.000 2.24 0.00 0.00 3.24
710 729 0.037326 TCAACGGCCACATCAGACTC 60.037 55.000 2.24 0.00 0.00 3.36
711 730 0.036952 CAACGGCCACATCAGACTCT 60.037 55.000 2.24 0.00 0.00 3.24
712 731 0.247736 AACGGCCACATCAGACTCTC 59.752 55.000 2.24 0.00 0.00 3.20
713 732 0.900182 ACGGCCACATCAGACTCTCA 60.900 55.000 2.24 0.00 0.00 3.27
714 733 0.179116 CGGCCACATCAGACTCTCAG 60.179 60.000 2.24 0.00 0.00 3.35
715 734 1.189752 GGCCACATCAGACTCTCAGA 58.810 55.000 0.00 0.00 0.00 3.27
728 747 3.330267 ACTCTCAGAAAACCGAATCTGC 58.670 45.455 0.00 0.00 42.21 4.26
746 765 3.775654 GAGACGTGAGGGGCCTGG 61.776 72.222 0.84 0.00 0.00 4.45
753 772 0.623723 GTGAGGGGCCTGGATGTTAA 59.376 55.000 0.84 0.00 0.00 2.01
762 781 4.039852 GGGCCTGGATGTTAAAAACAGAAA 59.960 41.667 0.84 0.00 45.95 2.52
772 791 7.106663 TGTTAAAAACAGAAACCACAAAACG 57.893 32.000 0.00 0.00 36.25 3.60
773 792 6.921857 TGTTAAAAACAGAAACCACAAAACGA 59.078 30.769 0.00 0.00 36.25 3.85
774 793 7.115095 TGTTAAAAACAGAAACCACAAAACGAG 59.885 33.333 0.00 0.00 36.25 4.18
775 794 3.775661 AACAGAAACCACAAAACGAGG 57.224 42.857 0.00 0.00 0.00 4.63
790 809 0.996462 CGAGGCGCGAGAACATTTTA 59.004 50.000 12.10 0.00 44.57 1.52
792 811 2.030457 CGAGGCGCGAGAACATTTTATT 59.970 45.455 12.10 0.00 44.57 1.40
796 815 6.131544 AGGCGCGAGAACATTTTATTTATT 57.868 33.333 12.10 0.00 0.00 1.40
797 816 6.560711 AGGCGCGAGAACATTTTATTTATTT 58.439 32.000 12.10 0.00 0.00 1.40
798 817 7.033185 AGGCGCGAGAACATTTTATTTATTTT 58.967 30.769 12.10 0.00 0.00 1.82
799 818 8.185505 AGGCGCGAGAACATTTTATTTATTTTA 58.814 29.630 12.10 0.00 0.00 1.52
957 982 9.228949 CCCCTCTAGAAAATATCATCATTTCTG 57.771 37.037 9.56 2.06 41.93 3.02
1143 1189 1.139853 GATTGAGGTGCGGATTCTCCT 59.860 52.381 7.53 0.00 33.30 3.69
1283 1332 5.163131 TGGATAGGCAGGTAAACCTTTATCC 60.163 44.000 22.78 22.78 46.09 2.59
1289 1338 1.213678 GGTAAACCTTTATCCCCGGCT 59.786 52.381 0.00 0.00 0.00 5.52
1297 1346 3.317993 CCTTTATCCCCGGCTTTGTATTG 59.682 47.826 0.00 0.00 0.00 1.90
1463 1513 6.146673 CGATTTCGGTAGTTTTGAGGTTTAGT 59.853 38.462 0.00 0.00 35.37 2.24
1475 1525 2.945668 GAGGTTTAGTCCATGCATGTCC 59.054 50.000 24.58 14.35 0.00 4.02
1484 1534 1.269174 CCATGCATGTCCGTTTGTTCA 59.731 47.619 24.58 0.00 0.00 3.18
1487 1538 0.240945 GCATGTCCGTTTGTTCAGGG 59.759 55.000 0.00 0.00 0.00 4.45
1502 1553 3.281727 TCAGGGATTAACTGACCATGC 57.718 47.619 0.00 0.00 39.87 4.06
1553 1606 3.007398 GGGAGTGGAGTAGATAGCATTGG 59.993 52.174 0.00 0.00 0.00 3.16
1555 1608 3.643792 GAGTGGAGTAGATAGCATTGGGT 59.356 47.826 0.00 0.00 0.00 4.51
1562 1615 3.959495 AGATAGCATTGGGTTGGATGT 57.041 42.857 0.00 0.00 0.00 3.06
1664 1718 5.060200 GCTAAATATAGTAACCGTAGCACGC 59.940 44.000 3.56 0.00 40.91 5.34
1706 1760 8.370940 TCTCTTCATCATGTAGTGGGATTAATC 58.629 37.037 6.93 6.93 0.00 1.75
1799 1853 7.410174 TCTTGGTCATGTAGTGGGATTAATTT 58.590 34.615 0.00 0.00 0.00 1.82
1800 1854 7.893302 TCTTGGTCATGTAGTGGGATTAATTTT 59.107 33.333 0.00 0.00 0.00 1.82
1823 1877 2.613026 TGTATTCATGGGTGTAGCCG 57.387 50.000 0.00 0.00 38.44 5.52
1882 1936 6.210796 CAGTTTGCTGAATCAATGTTCTTCA 58.789 36.000 0.00 0.00 45.28 3.02
1887 1941 6.983984 TGCTGAATCAATGTTCTTCAATTCA 58.016 32.000 0.00 0.00 32.96 2.57
1916 1970 0.247736 GGCTGTGACGTGATCTCCTT 59.752 55.000 0.00 0.00 0.00 3.36
1931 1985 2.309755 TCTCCTTGCATGGTTCATCCTT 59.690 45.455 17.54 0.00 37.07 3.36
1968 2022 1.613836 CTTGCTCAGGCTCCAAGTTT 58.386 50.000 9.68 0.00 39.59 2.66
1996 2050 0.687354 CTCCAGTTGTGGTAGCCAGT 59.313 55.000 0.00 0.00 45.28 4.00
2060 2115 1.681780 GGGTCTGAATCGGAAATGCCA 60.682 52.381 0.00 0.00 35.94 4.92
2113 2168 6.549364 TGGTTTCAATTGGTGATTTGTCTAGT 59.451 34.615 5.42 0.00 35.70 2.57
2114 2169 7.084486 GGTTTCAATTGGTGATTTGTCTAGTC 58.916 38.462 5.42 0.00 35.70 2.59
2279 2334 2.907892 TCTTCAGTCAGGGAGGATGTT 58.092 47.619 0.00 0.00 0.00 2.71
2315 2370 1.462238 ACCTGTGTCAAGCCCCTCT 60.462 57.895 0.00 0.00 0.00 3.69
2445 2500 2.889170 TTCCCCGGATGAATCAAACA 57.111 45.000 0.73 0.00 0.00 2.83
2447 2502 1.912731 TCCCCGGATGAATCAAACAGA 59.087 47.619 0.73 0.00 0.00 3.41
2483 2538 1.131126 CATGCGTTTGATGGACTCACC 59.869 52.381 0.00 0.00 39.54 4.02
2560 2618 1.870055 AAATTGCAGCCTGCTGTCCG 61.870 55.000 18.96 0.00 45.31 4.79
2563 2621 2.510238 GCAGCCTGCTGTCCGTAG 60.510 66.667 19.45 0.00 45.24 3.51
2682 2740 2.495155 TGGTTCACCATGTGATCAGG 57.505 50.000 0.00 0.00 42.40 3.86
2703 2761 3.192212 GGATGAACTTCAGGCAAGGAAAG 59.808 47.826 0.00 0.00 36.26 2.62
2717 2775 0.687354 GGAAAGGACTGCTGTCTCCA 59.313 55.000 21.27 0.00 42.54 3.86
2751 2809 5.023452 TGCTCTCTAGAAAGTTCCATGGTA 58.977 41.667 12.58 0.00 0.00 3.25
2755 2813 7.554476 GCTCTCTAGAAAGTTCCATGGTAATTT 59.446 37.037 15.48 15.48 0.00 1.82
2802 2860 1.745087 GATTTCAGCATTCCGAGCCAA 59.255 47.619 0.00 0.00 0.00 4.52
2828 2886 6.420913 AAGAAACTCTACAGTTCTGGCTTA 57.579 37.500 4.82 0.00 42.45 3.09
3080 3138 6.421202 GCCCTAGACGTATTCATAAAGTCAAG 59.579 42.308 0.00 0.00 34.56 3.02
3088 3146 8.737175 ACGTATTCATAAAGTCAAGACTACAGA 58.263 33.333 2.72 0.00 41.58 3.41
3165 3223 4.284178 ACAGGGAGGATTTGATGGAATTG 58.716 43.478 0.00 0.00 0.00 2.32
3180 3238 3.202818 TGGAATTGGGATGCTAGATGTGT 59.797 43.478 0.00 0.00 0.00 3.72
3278 3336 2.307098 CTGGGGTTCTGAATCTTCACCT 59.693 50.000 0.02 0.00 32.90 4.00
3283 3341 4.562963 GGGTTCTGAATCTTCACCTACGTT 60.563 45.833 0.00 0.00 32.90 3.99
3368 3426 2.716424 TGAGGAATCCCTTTTGTCTGGT 59.284 45.455 0.00 0.00 44.53 4.00
3463 3522 5.642063 TCGAGGGTATTGACTGTTGAATTTC 59.358 40.000 0.00 0.00 0.00 2.17
3569 3628 4.276926 ACTCAGAAACTTCCATTTGCAGTC 59.723 41.667 0.00 0.00 0.00 3.51
3690 3749 7.686434 ACTCCAAAGAAGCCTTAGTAACAATA 58.314 34.615 0.00 0.00 31.15 1.90
3769 3828 5.941647 TGGTACTAAATTGCTTGACCCTTAC 59.058 40.000 0.00 0.00 0.00 2.34
3778 3837 3.209410 GCTTGACCCTTACCTCATGATG 58.791 50.000 0.00 0.00 0.00 3.07
3864 3925 9.854668 TCTCTATCTAGTTATGCTTTACACTCT 57.145 33.333 0.00 0.00 0.00 3.24
3865 3926 9.891828 CTCTATCTAGTTATGCTTTACACTCTG 57.108 37.037 0.00 0.00 0.00 3.35
3866 3927 9.409918 TCTATCTAGTTATGCTTTACACTCTGT 57.590 33.333 0.00 0.00 0.00 3.41
3868 3929 8.934507 ATCTAGTTATGCTTTACACTCTGTTC 57.065 34.615 0.00 0.00 0.00 3.18
3869 3930 7.321153 TCTAGTTATGCTTTACACTCTGTTCC 58.679 38.462 0.00 0.00 0.00 3.62
3870 3931 5.865085 AGTTATGCTTTACACTCTGTTCCA 58.135 37.500 0.00 0.00 0.00 3.53
3871 3932 6.296026 AGTTATGCTTTACACTCTGTTCCAA 58.704 36.000 0.00 0.00 0.00 3.53
3872 3933 6.770785 AGTTATGCTTTACACTCTGTTCCAAA 59.229 34.615 0.00 0.00 0.00 3.28
3873 3934 7.284489 AGTTATGCTTTACACTCTGTTCCAAAA 59.716 33.333 0.00 0.00 0.00 2.44
3874 3935 6.655078 ATGCTTTACACTCTGTTCCAAAAT 57.345 33.333 0.00 0.00 0.00 1.82
3875 3936 7.759489 ATGCTTTACACTCTGTTCCAAAATA 57.241 32.000 0.00 0.00 0.00 1.40
3876 3937 7.575414 TGCTTTACACTCTGTTCCAAAATAA 57.425 32.000 0.00 0.00 0.00 1.40
3877 3938 7.648142 TGCTTTACACTCTGTTCCAAAATAAG 58.352 34.615 0.00 0.00 0.00 1.73
3878 3939 6.582672 GCTTTACACTCTGTTCCAAAATAAGC 59.417 38.462 0.00 0.00 0.00 3.09
3879 3940 4.749245 ACACTCTGTTCCAAAATAAGCG 57.251 40.909 0.00 0.00 0.00 4.68
3880 3941 4.134563 ACACTCTGTTCCAAAATAAGCGT 58.865 39.130 0.00 0.00 0.00 5.07
3881 3942 4.213482 ACACTCTGTTCCAAAATAAGCGTC 59.787 41.667 0.00 0.00 0.00 5.19
3882 3943 3.432252 ACTCTGTTCCAAAATAAGCGTCG 59.568 43.478 0.00 0.00 0.00 5.12
3883 3944 3.395639 TCTGTTCCAAAATAAGCGTCGT 58.604 40.909 0.00 0.00 0.00 4.34
3884 3945 3.185594 TCTGTTCCAAAATAAGCGTCGTG 59.814 43.478 0.00 0.00 0.00 4.35
3885 3946 2.873472 TGTTCCAAAATAAGCGTCGTGT 59.127 40.909 0.00 0.00 0.00 4.49
3886 3947 3.312973 TGTTCCAAAATAAGCGTCGTGTT 59.687 39.130 0.00 0.00 0.00 3.32
3887 3948 4.201930 TGTTCCAAAATAAGCGTCGTGTTT 60.202 37.500 0.00 0.00 0.00 2.83
3888 3949 4.136517 TCCAAAATAAGCGTCGTGTTTC 57.863 40.909 0.00 0.00 0.00 2.78
3889 3950 3.058777 TCCAAAATAAGCGTCGTGTTTCC 60.059 43.478 0.00 0.00 0.00 3.13
3890 3951 3.058501 CCAAAATAAGCGTCGTGTTTCCT 60.059 43.478 0.00 0.00 0.00 3.36
3891 3952 4.533222 CAAAATAAGCGTCGTGTTTCCTT 58.467 39.130 0.00 0.00 0.00 3.36
3892 3953 4.823790 AAATAAGCGTCGTGTTTCCTTT 57.176 36.364 0.00 0.00 0.00 3.11
3898 3959 3.795101 AGCGTCGTGTTTCCTTTATATCG 59.205 43.478 0.00 0.00 0.00 2.92
3910 3971 7.624360 TTCCTTTATATCGCATTTGACAAGT 57.376 32.000 0.00 0.00 0.00 3.16
3914 3975 7.588854 CCTTTATATCGCATTTGACAAGTCATG 59.411 37.037 3.43 1.82 39.64 3.07
3918 3979 3.563390 TCGCATTTGACAAGTCATGTTGA 59.437 39.130 3.43 1.38 44.12 3.18
3932 3993 5.069516 AGTCATGTTGAATTGTCTGCCTTTT 59.930 36.000 0.00 0.00 0.00 2.27
4032 4093 2.952310 GGTTTCCTTTTCTCACAGCACT 59.048 45.455 0.00 0.00 0.00 4.40
4091 4152 7.995289 TGAAATTGTATTGAGTTGTTCTGTGT 58.005 30.769 0.00 0.00 0.00 3.72
4121 4182 6.294675 CCATCTTGAGTTAAACAATTGCCTCA 60.295 38.462 5.05 6.79 0.00 3.86
4182 4243 5.779922 ACATTCTTCTGCAACTACGACTTA 58.220 37.500 0.00 0.00 0.00 2.24
4194 4255 1.710013 ACGACTTAACTGACATGCCG 58.290 50.000 0.00 0.00 0.00 5.69
4212 4273 1.607251 CCGTCTGGAACCAAGGTACAC 60.607 57.143 0.00 0.00 37.49 2.90
4224 4285 7.554835 GGAACCAAGGTACACAATATTATGACA 59.445 37.037 0.00 0.00 0.00 3.58
4233 4294 9.973246 GTACACAATATTATGACAAGTTGACTG 57.027 33.333 10.54 0.00 0.00 3.51
4243 4304 4.997395 TGACAAGTTGACTGCTTATCCTTC 59.003 41.667 10.54 0.00 0.00 3.46
4281 4348 9.520204 AAAACCAAAGATTATTCTGATATTGCG 57.480 29.630 0.00 0.00 30.72 4.85
4349 4416 6.840780 AGTTGCAATTTCCAAGCTATAACT 57.159 33.333 0.59 0.00 0.00 2.24
4353 4420 7.887996 TGCAATTTCCAAGCTATAACTTTTG 57.112 32.000 0.00 0.00 0.00 2.44
4385 4456 2.838736 AGCCTTACACCTAATCATGCG 58.161 47.619 0.00 0.00 0.00 4.73
4402 4473 1.754226 TGCGCATAGTGTGTCCTCATA 59.246 47.619 5.66 0.00 0.00 2.15
4405 4491 3.921021 GCGCATAGTGTGTCCTCATATAC 59.079 47.826 0.30 0.00 0.00 1.47
4443 4529 1.749258 CCGGGTTGCCTAAGGAAGC 60.749 63.158 0.00 0.00 0.00 3.86
4461 4547 4.499183 GAAGCGAGGAAGATTGAAAGAGA 58.501 43.478 0.00 0.00 0.00 3.10
4465 4551 4.681744 CGAGGAAGATTGAAAGAGAGAGG 58.318 47.826 0.00 0.00 0.00 3.69
4525 4643 2.948979 TGTTTAGCAAGTGTTCCACCTG 59.051 45.455 0.00 0.00 34.49 4.00
4537 4655 1.993956 TCCACCTGGTTTTGACCATG 58.006 50.000 0.00 0.00 39.34 3.66
4539 4657 2.038659 CCACCTGGTTTTGACCATGTT 58.961 47.619 0.00 0.00 36.67 2.71
4581 4703 5.532406 CCTGAGTAATCTCTCTCTCTTCCTG 59.468 48.000 0.00 0.00 40.98 3.86
4590 4712 3.028130 CTCTCTCTTCCTGTTCCCCTAC 58.972 54.545 0.00 0.00 0.00 3.18
4646 4771 5.013079 TCAGGACACAGAACAGGTAATTCAT 59.987 40.000 0.00 0.00 0.00 2.57
4659 4784 7.709947 ACAGGTAATTCATCATTTAGTGCATG 58.290 34.615 0.00 0.00 0.00 4.06
4671 4796 8.116651 TCATTTAGTGCATGCCTTAACTTAAA 57.883 30.769 16.68 12.30 0.00 1.52
4677 4802 7.368059 AGTGCATGCCTTAACTTAAAAAGTAC 58.632 34.615 16.68 0.00 41.91 2.73
4689 4814 5.187576 ACTTAAAAAGTACCATGGCATGCAT 59.812 36.000 22.02 14.02 40.69 3.96
4690 4815 3.530265 AAAAGTACCATGGCATGCATG 57.470 42.857 22.70 22.70 0.00 4.06
4920 5048 1.001293 GCTCAGTGTGTCTCATGTGGA 59.999 52.381 0.00 0.00 0.00 4.02
5035 5164 7.225538 TGAGTCTCTGATTGTTTCTTTGTCTTC 59.774 37.037 0.65 0.00 0.00 2.87
5069 5198 2.970324 GGCGGACGTGCAACTCAA 60.970 61.111 8.11 0.00 36.28 3.02
5153 5282 8.556589 TGAAGGAATCAGATAAACCCAATTCTA 58.443 33.333 0.00 0.00 33.04 2.10
5320 5449 1.448717 GTTTCTCTGCTCCGCCTCC 60.449 63.158 0.00 0.00 0.00 4.30
5467 5596 2.602738 GCACTCGGATGCAGATGAG 58.397 57.895 9.56 9.56 45.39 2.90
5589 5718 5.468746 TGCTAAAGTTTGTCGTTCAGCTTAT 59.531 36.000 0.00 0.00 0.00 1.73
5599 5728 7.546778 TGTCGTTCAGCTTATGCATAAATAA 57.453 32.000 19.32 8.89 42.74 1.40
5645 5774 6.347725 CGGCTAAATTCGAGGATTTAATCTGG 60.348 42.308 4.87 0.00 32.69 3.86
5683 5812 2.719739 CAGCTGAAGGTGGAACATGAT 58.280 47.619 8.42 0.00 44.52 2.45
5950 6081 1.413077 CTCCCTCCGTCCTGAATTACC 59.587 57.143 0.00 0.00 0.00 2.85
5964 6095 7.288158 GTCCTGAATTACCTGTCTTATACTCCT 59.712 40.741 0.00 0.00 0.00 3.69
5967 6098 8.019656 TGAATTACCTGTCTTATACTCCTTCC 57.980 38.462 0.00 0.00 0.00 3.46
5983 6114 3.073356 TCCTTCCGTCCCAAAATAAGTGT 59.927 43.478 0.00 0.00 0.00 3.55
5986 6117 4.360951 TCCGTCCCAAAATAAGTGTCTT 57.639 40.909 0.00 0.00 0.00 3.01
5989 6120 5.702209 TCCGTCCCAAAATAAGTGTCTTAAC 59.298 40.000 0.00 0.00 0.00 2.01
5993 6124 7.801783 CGTCCCAAAATAAGTGTCTTAACTTTC 59.198 37.037 0.00 0.00 40.77 2.62
6052 6183 2.238898 AGTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
6054 6185 1.073098 ATTTTGGGACGGAGGGAGTT 58.927 50.000 0.00 0.00 0.00 3.01
6064 6199 4.405036 GGACGGAGGGAGTTTTTAGATACT 59.595 45.833 0.00 0.00 0.00 2.12
6160 6296 1.299541 GTATCGTGTTCCCCATGCTG 58.700 55.000 0.00 0.00 0.00 4.41
6175 6311 0.622136 TGCTGGGAGTACTCTCGGTA 59.378 55.000 28.42 23.36 38.70 4.02
6185 6321 4.290104 GTACTCTCGGTACTTCCACATC 57.710 50.000 0.00 0.00 45.25 3.06
6186 6322 2.100989 ACTCTCGGTACTTCCACATCC 58.899 52.381 0.00 0.00 35.57 3.51
6201 6337 2.089980 ACATCCAAGCGTACGTACTCT 58.910 47.619 22.55 17.67 0.00 3.24
6202 6338 2.097142 ACATCCAAGCGTACGTACTCTC 59.903 50.000 22.55 11.78 0.00 3.20
6288 6452 5.924475 AGTTGTGAATCCAAGACTTTACG 57.076 39.130 0.00 0.00 0.00 3.18
6293 6457 5.298276 TGTGAATCCAAGACTTTACGCTTTT 59.702 36.000 0.00 0.00 0.00 2.27
6340 6506 6.620877 AGATGGTACTTTTCACATCTACCA 57.379 37.500 7.91 0.00 45.84 3.25
6359 6525 4.374399 ACCATGAAAAGTTTCGTACGTCT 58.626 39.130 16.05 9.55 40.01 4.18
6364 6530 4.027458 TGAAAAGTTTCGTACGTCTTCGTG 60.027 41.667 16.05 0.00 43.86 4.35
6365 6531 7.443813 TGAAAAGTTTCGTACGTCTTCGTGC 62.444 44.000 16.05 4.72 43.86 5.34
6434 9283 1.669265 GTTTCTGTTATGGGCCGCTAC 59.331 52.381 0.00 0.00 0.00 3.58
6513 9362 6.822676 CCCATCCTGCTCTTTTAGATCATATC 59.177 42.308 0.00 0.00 0.00 1.63
6514 9363 7.311171 CCCATCCTGCTCTTTTAGATCATATCT 60.311 40.741 0.00 0.00 43.33 1.98
6566 9415 3.384146 TGAATCAAACAAGCCAAAGCAGA 59.616 39.130 0.00 0.00 43.56 4.26
6649 12458 6.830912 AGGCTCACACATACATACATACATT 58.169 36.000 0.00 0.00 0.00 2.71
6650 12459 7.962441 AGGCTCACACATACATACATACATTA 58.038 34.615 0.00 0.00 0.00 1.90
6651 12460 7.872993 AGGCTCACACATACATACATACATTAC 59.127 37.037 0.00 0.00 0.00 1.89
6652 12461 7.655732 GGCTCACACATACATACATACATTACA 59.344 37.037 0.00 0.00 0.00 2.41
6653 12462 9.208022 GCTCACACATACATACATACATTACAT 57.792 33.333 0.00 0.00 0.00 2.29
6667 12476 8.696374 ACATACATTACATACAACTAGCTGAGT 58.304 33.333 0.00 0.00 41.56 3.41
6668 12477 8.972349 CATACATTACATACAACTAGCTGAGTG 58.028 37.037 0.00 1.10 38.87 3.51
6669 12478 5.812642 ACATTACATACAACTAGCTGAGTGC 59.187 40.000 0.00 0.00 38.87 4.40
6670 12479 3.252974 ACATACAACTAGCTGAGTGCC 57.747 47.619 0.00 0.00 44.23 5.01
6671 12480 2.093447 ACATACAACTAGCTGAGTGCCC 60.093 50.000 0.00 0.00 44.23 5.36
6672 12481 0.530744 TACAACTAGCTGAGTGCCCG 59.469 55.000 0.00 0.00 44.23 6.13
6673 12482 1.293498 CAACTAGCTGAGTGCCCGT 59.707 57.895 0.00 0.00 44.23 5.28
6674 12483 1.016130 CAACTAGCTGAGTGCCCGTG 61.016 60.000 0.00 0.00 44.23 4.94
6675 12484 2.510238 CTAGCTGAGTGCCCGTGC 60.510 66.667 0.00 0.00 44.23 5.34
6676 12485 4.435436 TAGCTGAGTGCCCGTGCG 62.435 66.667 0.00 0.00 44.23 5.34
6679 12488 3.716006 CTGAGTGCCCGTGCGTTG 61.716 66.667 0.00 0.00 41.78 4.10
6690 12499 4.380980 TGCGTTGCCACGGAATAA 57.619 50.000 12.66 0.00 44.68 1.40
6691 12500 2.861364 TGCGTTGCCACGGAATAAT 58.139 47.368 12.66 0.00 44.68 1.28
6692 12501 2.025589 TGCGTTGCCACGGAATAATA 57.974 45.000 12.66 0.00 44.68 0.98
6693 12502 2.357075 TGCGTTGCCACGGAATAATAA 58.643 42.857 12.66 0.00 44.68 1.40
6694 12503 2.747989 TGCGTTGCCACGGAATAATAAA 59.252 40.909 12.66 0.00 44.68 1.40
6695 12504 3.378742 TGCGTTGCCACGGAATAATAAAT 59.621 39.130 12.66 0.00 44.68 1.40
6696 12505 4.575236 TGCGTTGCCACGGAATAATAAATA 59.425 37.500 12.66 0.00 44.68 1.40
6697 12506 5.066117 TGCGTTGCCACGGAATAATAAATAA 59.934 36.000 12.66 0.00 44.68 1.40
6698 12507 6.404403 TGCGTTGCCACGGAATAATAAATAAA 60.404 34.615 12.66 0.00 44.68 1.40
6699 12508 7.840554 TGCGTTGCCACGGAATAATAAATAAAA 60.841 33.333 12.66 0.00 44.68 1.52
6700 12509 8.045750 CGTTGCCACGGAATAATAAATAAAAG 57.954 34.615 1.68 0.00 43.16 2.27
6701 12510 7.305763 CGTTGCCACGGAATAATAAATAAAAGC 60.306 37.037 1.68 0.00 43.16 3.51
6702 12511 7.341445 TGCCACGGAATAATAAATAAAAGCT 57.659 32.000 0.00 0.00 0.00 3.74
6703 12512 8.453238 TGCCACGGAATAATAAATAAAAGCTA 57.547 30.769 0.00 0.00 0.00 3.32
6704 12513 9.073475 TGCCACGGAATAATAAATAAAAGCTAT 57.927 29.630 0.00 0.00 0.00 2.97
6757 12566 6.503589 TTTTACAAATGTCCGTATCAAGGG 57.496 37.500 0.00 0.00 0.00 3.95
6758 12567 3.713826 ACAAATGTCCGTATCAAGGGT 57.286 42.857 0.00 0.00 32.23 4.34
6759 12568 4.829872 ACAAATGTCCGTATCAAGGGTA 57.170 40.909 0.00 0.00 32.23 3.69
6760 12569 5.168647 ACAAATGTCCGTATCAAGGGTAA 57.831 39.130 0.00 0.00 32.23 2.85
6761 12570 5.751586 ACAAATGTCCGTATCAAGGGTAAT 58.248 37.500 0.00 0.00 32.23 1.89
6762 12571 5.588648 ACAAATGTCCGTATCAAGGGTAATG 59.411 40.000 0.00 0.00 32.23 1.90
6763 12572 5.367945 AATGTCCGTATCAAGGGTAATGT 57.632 39.130 0.00 0.00 32.23 2.71
6764 12573 4.131649 TGTCCGTATCAAGGGTAATGTG 57.868 45.455 0.00 0.00 32.23 3.21
6765 12574 3.516300 TGTCCGTATCAAGGGTAATGTGT 59.484 43.478 0.00 0.00 32.23 3.72
6766 12575 4.710865 TGTCCGTATCAAGGGTAATGTGTA 59.289 41.667 0.00 0.00 32.23 2.90
6767 12576 5.364446 TGTCCGTATCAAGGGTAATGTGTAT 59.636 40.000 0.00 0.00 32.23 2.29
6768 12577 5.694910 GTCCGTATCAAGGGTAATGTGTATG 59.305 44.000 0.00 0.00 32.23 2.39
6769 12578 4.451096 CCGTATCAAGGGTAATGTGTATGC 59.549 45.833 0.00 0.00 0.00 3.14
6770 12579 4.149922 CGTATCAAGGGTAATGTGTATGCG 59.850 45.833 0.00 0.00 0.00 4.73
6771 12580 3.897141 TCAAGGGTAATGTGTATGCGA 57.103 42.857 0.00 0.00 0.00 5.10
6772 12581 4.415881 TCAAGGGTAATGTGTATGCGAT 57.584 40.909 0.00 0.00 0.00 4.58
6773 12582 4.126437 TCAAGGGTAATGTGTATGCGATG 58.874 43.478 0.00 0.00 0.00 3.84
6774 12583 3.838244 AGGGTAATGTGTATGCGATGT 57.162 42.857 0.00 0.00 0.00 3.06
6775 12584 3.728845 AGGGTAATGTGTATGCGATGTC 58.271 45.455 0.00 0.00 0.00 3.06
6776 12585 3.388024 AGGGTAATGTGTATGCGATGTCT 59.612 43.478 0.00 0.00 0.00 3.41
6777 12586 3.494626 GGGTAATGTGTATGCGATGTCTG 59.505 47.826 0.00 0.00 0.00 3.51
6778 12587 4.119862 GGTAATGTGTATGCGATGTCTGT 58.880 43.478 0.00 0.00 0.00 3.41
6779 12588 4.209288 GGTAATGTGTATGCGATGTCTGTC 59.791 45.833 0.00 0.00 0.00 3.51
6780 12589 3.808466 ATGTGTATGCGATGTCTGTCT 57.192 42.857 0.00 0.00 0.00 3.41
6781 12590 4.918810 ATGTGTATGCGATGTCTGTCTA 57.081 40.909 0.00 0.00 0.00 2.59
6782 12591 4.918810 TGTGTATGCGATGTCTGTCTAT 57.081 40.909 0.00 0.00 0.00 1.98
6783 12592 4.860072 TGTGTATGCGATGTCTGTCTATC 58.140 43.478 0.00 0.00 0.00 2.08
6784 12593 4.580580 TGTGTATGCGATGTCTGTCTATCT 59.419 41.667 0.00 0.00 0.00 1.98
6785 12594 5.763204 TGTGTATGCGATGTCTGTCTATCTA 59.237 40.000 0.00 0.00 0.00 1.98
6786 12595 6.262273 TGTGTATGCGATGTCTGTCTATCTAA 59.738 38.462 0.00 0.00 0.00 2.10
6787 12596 6.799441 GTGTATGCGATGTCTGTCTATCTAAG 59.201 42.308 0.00 0.00 0.00 2.18
6788 12597 6.710744 TGTATGCGATGTCTGTCTATCTAAGA 59.289 38.462 0.00 0.00 0.00 2.10
6789 12598 6.641169 ATGCGATGTCTGTCTATCTAAGAA 57.359 37.500 0.00 0.00 35.47 2.52
6790 12599 6.641169 TGCGATGTCTGTCTATCTAAGAAT 57.359 37.500 0.00 0.00 35.47 2.40
6791 12600 7.043961 TGCGATGTCTGTCTATCTAAGAATT 57.956 36.000 0.00 0.00 35.47 2.17
6792 12601 7.492524 TGCGATGTCTGTCTATCTAAGAATTT 58.507 34.615 0.00 0.00 35.47 1.82
6793 12602 7.981789 TGCGATGTCTGTCTATCTAAGAATTTT 59.018 33.333 0.00 0.00 35.47 1.82
6794 12603 8.821894 GCGATGTCTGTCTATCTAAGAATTTTT 58.178 33.333 0.00 0.00 35.47 1.94
6827 12636 9.675464 TCCCTCGTTTTACATTAATCTTATTGT 57.325 29.630 0.00 3.74 33.39 2.71
6828 12637 9.716507 CCCTCGTTTTACATTAATCTTATTGTG 57.283 33.333 7.43 0.00 31.81 3.33
6847 12656 9.906660 TTATTGTGTGTTTCTCATAAAATGACC 57.093 29.630 0.00 0.00 35.06 4.02
6848 12657 6.325919 TGTGTGTTTCTCATAAAATGACCC 57.674 37.500 0.00 0.00 35.06 4.46
6849 12658 5.049060 TGTGTGTTTCTCATAAAATGACCCG 60.049 40.000 0.00 0.00 35.06 5.28
6850 12659 5.048991 GTGTGTTTCTCATAAAATGACCCGT 60.049 40.000 0.00 0.00 35.06 5.28
6851 12660 5.533154 TGTGTTTCTCATAAAATGACCCGTT 59.467 36.000 0.00 0.00 35.06 4.44
6852 12661 5.856455 GTGTTTCTCATAAAATGACCCGTTG 59.144 40.000 0.00 0.00 35.06 4.10
6853 12662 5.533154 TGTTTCTCATAAAATGACCCGTTGT 59.467 36.000 0.00 0.00 35.06 3.32
6854 12663 6.711194 TGTTTCTCATAAAATGACCCGTTGTA 59.289 34.615 0.00 0.00 35.06 2.41
6855 12664 7.392113 TGTTTCTCATAAAATGACCCGTTGTAT 59.608 33.333 0.00 0.00 35.06 2.29
6856 12665 7.548196 TTCTCATAAAATGACCCGTTGTATC 57.452 36.000 0.00 0.00 35.06 2.24
6857 12666 6.645306 TCTCATAAAATGACCCGTTGTATCA 58.355 36.000 0.00 0.00 35.06 2.15
6858 12667 7.279615 TCTCATAAAATGACCCGTTGTATCAT 58.720 34.615 0.00 0.00 35.06 2.45
6859 12668 8.425703 TCTCATAAAATGACCCGTTGTATCATA 58.574 33.333 0.00 0.00 35.06 2.15
6860 12669 9.219603 CTCATAAAATGACCCGTTGTATCATAT 57.780 33.333 0.00 0.00 35.06 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.215827 GTCCATGATGCATCATCTTTCTCC 59.784 45.833 34.17 16.47 45.23 3.71
46 48 1.352352 CTTCCCAATGACACTCCCTGT 59.648 52.381 0.00 0.00 34.96 4.00
47 49 1.630369 TCTTCCCAATGACACTCCCTG 59.370 52.381 0.00 0.00 0.00 4.45
48 50 2.044793 TCTTCCCAATGACACTCCCT 57.955 50.000 0.00 0.00 0.00 4.20
90 92 4.682778 TGGTATCAAATCTAAGACCGGG 57.317 45.455 6.32 0.00 0.00 5.73
139 145 2.755655 CTGTGGACTGGACCTACTACTG 59.244 54.545 0.00 0.00 0.00 2.74
140 146 2.379226 ACTGTGGACTGGACCTACTACT 59.621 50.000 0.00 0.00 0.00 2.57
141 147 2.805194 ACTGTGGACTGGACCTACTAC 58.195 52.381 0.00 0.00 0.00 2.73
142 148 3.537795 AACTGTGGACTGGACCTACTA 57.462 47.619 0.00 0.00 0.00 1.82
159 165 6.779539 AGAAAATGGAGACTGGATTCAAAACT 59.220 34.615 0.00 0.00 0.00 2.66
170 176 3.664107 TCACGGAAGAAAATGGAGACTG 58.336 45.455 0.00 0.00 0.00 3.51
178 184 7.651704 CCTGTTTGTAATTTCACGGAAGAAAAT 59.348 33.333 4.47 0.09 40.54 1.82
187 193 2.352323 GGGGCCTGTTTGTAATTTCACG 60.352 50.000 0.84 0.00 0.00 4.35
238 244 5.590259 GGATGATTTCGAGGAGGATCAAAAA 59.410 40.000 0.00 0.00 36.25 1.94
241 247 3.711190 TGGATGATTTCGAGGAGGATCAA 59.289 43.478 0.00 0.00 36.25 2.57
242 248 3.308401 TGGATGATTTCGAGGAGGATCA 58.692 45.455 0.00 0.00 36.25 2.92
244 250 4.166539 AGATGGATGATTTCGAGGAGGAT 58.833 43.478 0.00 0.00 0.00 3.24
245 251 3.581101 AGATGGATGATTTCGAGGAGGA 58.419 45.455 0.00 0.00 0.00 3.71
246 252 4.348863 AAGATGGATGATTTCGAGGAGG 57.651 45.455 0.00 0.00 0.00 4.30
247 253 5.403766 CGTTAAGATGGATGATTTCGAGGAG 59.596 44.000 0.00 0.00 0.00 3.69
248 254 5.068591 TCGTTAAGATGGATGATTTCGAGGA 59.931 40.000 0.00 0.00 0.00 3.71
250 256 6.477033 ACTTCGTTAAGATGGATGATTTCGAG 59.523 38.462 0.00 0.00 36.50 4.04
253 259 7.905493 GTCAACTTCGTTAAGATGGATGATTTC 59.095 37.037 0.00 0.00 36.45 2.17
254 260 7.413000 CGTCAACTTCGTTAAGATGGATGATTT 60.413 37.037 0.00 0.00 36.45 2.17
257 263 4.862574 CGTCAACTTCGTTAAGATGGATGA 59.137 41.667 0.00 0.00 36.45 2.92
258 264 4.862574 TCGTCAACTTCGTTAAGATGGATG 59.137 41.667 0.00 0.00 36.45 3.51
259 265 5.068234 TCGTCAACTTCGTTAAGATGGAT 57.932 39.130 0.00 0.00 36.45 3.41
260 266 4.508461 TCGTCAACTTCGTTAAGATGGA 57.492 40.909 0.00 0.00 36.45 3.41
261 267 4.434330 GCTTCGTCAACTTCGTTAAGATGG 60.434 45.833 0.00 0.00 36.45 3.51
262 268 4.386049 AGCTTCGTCAACTTCGTTAAGATG 59.614 41.667 0.00 0.00 36.97 2.90
263 269 4.557205 AGCTTCGTCAACTTCGTTAAGAT 58.443 39.130 0.00 0.00 36.50 2.40
264 270 3.973657 AGCTTCGTCAACTTCGTTAAGA 58.026 40.909 0.00 0.00 36.50 2.10
265 271 4.689079 GAAGCTTCGTCAACTTCGTTAAG 58.311 43.478 11.40 0.00 38.77 1.85
266 272 4.703899 GAAGCTTCGTCAACTTCGTTAA 57.296 40.909 11.40 0.00 31.35 2.01
281 287 2.089600 AGGAGCCTATACCGAAGCTT 57.910 50.000 0.00 0.00 35.23 3.74
304 310 4.479786 AACATCAGCTTCCTAAGGAGAC 57.520 45.455 0.00 0.00 31.21 3.36
306 312 6.166984 TCATAACATCAGCTTCCTAAGGAG 57.833 41.667 0.00 0.00 31.21 3.69
308 314 7.718753 AGAAATCATAACATCAGCTTCCTAAGG 59.281 37.037 0.00 0.00 0.00 2.69
310 316 7.439356 CGAGAAATCATAACATCAGCTTCCTAA 59.561 37.037 0.00 0.00 0.00 2.69
312 318 5.757320 CGAGAAATCATAACATCAGCTTCCT 59.243 40.000 0.00 0.00 0.00 3.36
313 319 5.559799 GCGAGAAATCATAACATCAGCTTCC 60.560 44.000 0.00 0.00 0.00 3.46
315 321 4.025396 CGCGAGAAATCATAACATCAGCTT 60.025 41.667 0.00 0.00 0.00 3.74
316 322 3.492383 CGCGAGAAATCATAACATCAGCT 59.508 43.478 0.00 0.00 0.00 4.24
317 323 3.792294 CGCGAGAAATCATAACATCAGC 58.208 45.455 0.00 0.00 0.00 4.26
318 324 3.660132 CGCGCGAGAAATCATAACATCAG 60.660 47.826 28.94 0.00 0.00 2.90
322 328 1.323235 CACGCGCGAGAAATCATAACA 59.677 47.619 39.36 0.00 0.00 2.41
323 329 1.911709 GCACGCGCGAGAAATCATAAC 60.912 52.381 39.36 8.46 0.00 1.89
324 330 0.300491 GCACGCGCGAGAAATCATAA 59.700 50.000 39.36 0.00 0.00 1.90
344 350 1.198637 GTCAATCTGAAGTGCCTGCAC 59.801 52.381 14.25 14.25 46.50 4.57
345 351 1.072806 AGTCAATCTGAAGTGCCTGCA 59.927 47.619 0.00 0.00 0.00 4.41
346 352 1.736681 GAGTCAATCTGAAGTGCCTGC 59.263 52.381 0.00 0.00 0.00 4.85
351 357 4.013267 ACCCTTGAGTCAATCTGAAGTG 57.987 45.455 5.91 0.00 36.01 3.16
352 358 4.713792 AACCCTTGAGTCAATCTGAAGT 57.286 40.909 5.91 0.00 36.01 3.01
353 359 6.486657 TGTTAAACCCTTGAGTCAATCTGAAG 59.513 38.462 5.91 0.00 37.18 3.02
356 362 6.294176 CCTTGTTAAACCCTTGAGTCAATCTG 60.294 42.308 5.91 0.68 0.00 2.90
361 367 3.827722 CCCTTGTTAAACCCTTGAGTCA 58.172 45.455 0.00 0.00 0.00 3.41
364 370 1.539827 CGCCCTTGTTAAACCCTTGAG 59.460 52.381 0.00 0.00 0.00 3.02
380 386 2.218603 CCATGTAAACCATAGTCGCCC 58.781 52.381 0.00 0.00 30.71 6.13
392 398 2.969821 AAGGACCAGCACCATGTAAA 57.030 45.000 0.00 0.00 0.00 2.01
395 401 1.556911 CTCTAAGGACCAGCACCATGT 59.443 52.381 0.00 0.00 0.00 3.21
409 415 6.566197 AGTTTTCATGAAGTTGCCTCTAAG 57.434 37.500 8.41 0.00 0.00 2.18
414 420 5.976458 TGAAAAGTTTTCATGAAGTTGCCT 58.024 33.333 23.91 0.00 0.00 4.75
417 423 8.243289 ACAGTTGAAAAGTTTTCATGAAGTTG 57.757 30.769 27.11 20.64 0.00 3.16
419 425 7.601856 TGACAGTTGAAAAGTTTTCATGAAGT 58.398 30.769 27.11 22.52 0.00 3.01
453 461 2.158158 CCCATACTGGACCCATCCTAGA 60.158 54.545 0.00 0.00 46.43 2.43
459 467 0.029681 AGCTCCCATACTGGACCCAT 60.030 55.000 0.00 0.00 40.96 4.00
467 475 0.613260 TTTGTCGCAGCTCCCATACT 59.387 50.000 0.00 0.00 0.00 2.12
468 476 1.331756 CATTTGTCGCAGCTCCCATAC 59.668 52.381 0.00 0.00 0.00 2.39
484 492 0.949105 GAGCCACCGACGTGTCATTT 60.949 55.000 0.00 0.00 38.41 2.32
489 497 0.534203 AAAATGAGCCACCGACGTGT 60.534 50.000 0.00 0.00 38.41 4.49
504 512 3.067106 CGACCACTACTGCAGTCAAAAT 58.933 45.455 25.56 7.65 34.26 1.82
507 515 1.037493 ACGACCACTACTGCAGTCAA 58.963 50.000 25.56 5.78 34.26 3.18
511 519 1.702886 CTGAACGACCACTACTGCAG 58.297 55.000 13.48 13.48 0.00 4.41
526 534 1.957177 CGAGGTGCCTAGATAGCTGAA 59.043 52.381 0.00 0.00 0.00 3.02
527 535 1.143073 TCGAGGTGCCTAGATAGCTGA 59.857 52.381 0.00 0.00 0.00 4.26
528 536 1.610363 TCGAGGTGCCTAGATAGCTG 58.390 55.000 0.00 0.00 0.00 4.24
529 537 2.166829 CATCGAGGTGCCTAGATAGCT 58.833 52.381 12.38 0.00 36.50 3.32
530 538 1.889829 ACATCGAGGTGCCTAGATAGC 59.110 52.381 0.00 0.00 36.50 2.97
531 539 5.906113 ATTACATCGAGGTGCCTAGATAG 57.094 43.478 13.92 9.95 36.50 2.08
532 540 6.665992 AAATTACATCGAGGTGCCTAGATA 57.334 37.500 13.92 0.35 36.50 1.98
533 541 5.552870 AAATTACATCGAGGTGCCTAGAT 57.447 39.130 13.92 7.84 38.60 1.98
534 542 5.353394 AAAATTACATCGAGGTGCCTAGA 57.647 39.130 13.92 3.61 32.59 2.43
535 543 5.354234 ACAAAAATTACATCGAGGTGCCTAG 59.646 40.000 13.92 0.00 0.00 3.02
536 544 5.250200 ACAAAAATTACATCGAGGTGCCTA 58.750 37.500 13.92 0.00 0.00 3.93
537 545 4.079253 ACAAAAATTACATCGAGGTGCCT 58.921 39.130 13.92 0.00 0.00 4.75
538 546 4.434713 ACAAAAATTACATCGAGGTGCC 57.565 40.909 13.92 0.00 0.00 5.01
539 547 7.027161 ACATAACAAAAATTACATCGAGGTGC 58.973 34.615 13.92 0.00 0.00 5.01
540 548 8.849490 CAACATAACAAAAATTACATCGAGGTG 58.151 33.333 13.92 0.00 0.00 4.00
541 549 8.026607 CCAACATAACAAAAATTACATCGAGGT 58.973 33.333 8.21 8.21 0.00 3.85
542 550 8.240682 TCCAACATAACAAAAATTACATCGAGG 58.759 33.333 0.00 0.00 0.00 4.63
543 551 9.787532 ATCCAACATAACAAAAATTACATCGAG 57.212 29.630 0.00 0.00 0.00 4.04
544 552 9.566530 CATCCAACATAACAAAAATTACATCGA 57.433 29.630 0.00 0.00 0.00 3.59
545 553 9.352784 ACATCCAACATAACAAAAATTACATCG 57.647 29.630 0.00 0.00 0.00 3.84
554 562 6.344500 ACAAAGCACATCCAACATAACAAAA 58.656 32.000 0.00 0.00 0.00 2.44
558 566 6.254281 AGTACAAAGCACATCCAACATAAC 57.746 37.500 0.00 0.00 0.00 1.89
566 574 8.986477 ATTAATGAAAAGTACAAAGCACATCC 57.014 30.769 0.00 0.00 0.00 3.51
612 631 8.592155 GGACATTTATTTCTTTCGCAAAATACC 58.408 33.333 0.00 0.00 29.47 2.73
622 641 7.346751 TGCCCATAGGACATTTATTTCTTTC 57.653 36.000 0.00 0.00 33.47 2.62
669 688 2.766345 GGTGGTGGTTAATGTACCGA 57.234 50.000 0.00 0.00 41.28 4.69
696 715 1.189752 TCTGAGAGTCTGATGTGGCC 58.810 55.000 0.00 0.00 0.00 5.36
700 719 3.574396 TCGGTTTTCTGAGAGTCTGATGT 59.426 43.478 0.00 0.00 0.00 3.06
703 722 4.524714 AGATTCGGTTTTCTGAGAGTCTGA 59.475 41.667 0.00 0.00 36.48 3.27
704 723 4.624882 CAGATTCGGTTTTCTGAGAGTCTG 59.375 45.833 0.00 3.21 41.53 3.51
705 724 4.815269 CAGATTCGGTTTTCTGAGAGTCT 58.185 43.478 0.00 0.00 41.53 3.24
706 725 3.369451 GCAGATTCGGTTTTCTGAGAGTC 59.631 47.826 4.21 0.00 41.53 3.36
707 726 3.330267 GCAGATTCGGTTTTCTGAGAGT 58.670 45.455 4.21 0.00 41.53 3.24
708 727 2.346847 CGCAGATTCGGTTTTCTGAGAG 59.653 50.000 4.21 0.00 40.80 3.20
709 728 2.029380 TCGCAGATTCGGTTTTCTGAGA 60.029 45.455 4.21 3.48 43.51 3.27
710 729 2.337583 TCGCAGATTCGGTTTTCTGAG 58.662 47.619 4.21 1.12 41.53 3.35
711 730 2.029380 TCTCGCAGATTCGGTTTTCTGA 60.029 45.455 4.21 0.00 41.53 3.27
712 731 2.092838 GTCTCGCAGATTCGGTTTTCTG 59.907 50.000 0.00 0.00 41.84 3.02
713 732 2.338500 GTCTCGCAGATTCGGTTTTCT 58.662 47.619 0.00 0.00 33.89 2.52
714 733 1.059264 CGTCTCGCAGATTCGGTTTTC 59.941 52.381 0.00 0.00 33.89 2.29
715 734 1.068474 CGTCTCGCAGATTCGGTTTT 58.932 50.000 0.00 0.00 33.89 2.43
728 747 4.135153 CAGGCCCCTCACGTCTCG 62.135 72.222 0.00 0.00 0.00 4.04
746 765 7.895767 CGTTTTGTGGTTTCTGTTTTTAACATC 59.104 33.333 0.00 0.00 41.26 3.06
753 772 4.490743 CCTCGTTTTGTGGTTTCTGTTTT 58.509 39.130 0.00 0.00 0.00 2.43
762 781 3.645975 CGCGCCTCGTTTTGTGGT 61.646 61.111 0.00 0.00 33.61 4.16
772 791 3.675467 AATAAAATGTTCTCGCGCCTC 57.325 42.857 0.00 0.00 0.00 4.70
773 792 5.751243 ATAAATAAAATGTTCTCGCGCCT 57.249 34.783 0.00 0.00 0.00 5.52
774 793 6.806120 AAATAAATAAAATGTTCTCGCGCC 57.194 33.333 0.00 0.00 0.00 6.53
775 794 9.974528 GATAAAATAAATAAAATGTTCTCGCGC 57.025 29.630 0.00 0.00 0.00 6.86
790 809 7.221450 TCCGATTCCGAGTGGATAAAATAAAT 58.779 34.615 0.00 0.00 45.91 1.40
792 811 6.164417 TCCGATTCCGAGTGGATAAAATAA 57.836 37.500 0.00 0.00 45.91 1.40
796 815 4.160814 TCTTTCCGATTCCGAGTGGATAAA 59.839 41.667 0.00 0.00 45.91 1.40
797 816 3.702548 TCTTTCCGATTCCGAGTGGATAA 59.297 43.478 0.00 0.00 45.91 1.75
798 817 3.293337 TCTTTCCGATTCCGAGTGGATA 58.707 45.455 0.00 0.00 45.91 2.59
799 818 2.108168 TCTTTCCGATTCCGAGTGGAT 58.892 47.619 0.00 0.00 45.91 3.41
827 849 0.658897 TTTGTTCTCGTTCGGTTGCC 59.341 50.000 0.00 0.00 0.00 4.52
902 924 2.912295 GGGTTGGGTTGGGTTAGTACTA 59.088 50.000 0.00 0.00 0.00 1.82
903 925 1.706866 GGGTTGGGTTGGGTTAGTACT 59.293 52.381 0.00 0.00 0.00 2.73
904 926 1.424684 TGGGTTGGGTTGGGTTAGTAC 59.575 52.381 0.00 0.00 0.00 2.73
957 982 1.526225 GGGTCCTTGATTAGGCGCC 60.526 63.158 21.89 21.89 44.37 6.53
976 1001 1.234821 TTCCGCAAGCAACTAACCAG 58.765 50.000 0.00 0.00 0.00 4.00
1160 1206 4.222847 GCCTCGATCCGACCACCC 62.223 72.222 0.00 0.00 0.00 4.61
1175 1221 4.918201 CCGAGATTGAGGGCCGCC 62.918 72.222 4.35 0.00 0.00 6.13
1283 1332 1.139520 GCAGCAATACAAAGCCGGG 59.860 57.895 2.18 0.00 0.00 5.73
1289 1338 1.400142 CGGGAATCGCAGCAATACAAA 59.600 47.619 0.00 0.00 0.00 2.83
1297 1346 3.100862 GAGCAACGGGAATCGCAGC 62.101 63.158 0.00 0.00 43.89 5.25
1401 1451 3.065925 GCCAAATTCGAGGAAATGAGAGG 59.934 47.826 0.00 0.00 0.00 3.69
1463 1513 1.539388 GAACAAACGGACATGCATGGA 59.461 47.619 29.41 0.00 0.00 3.41
1475 1525 4.083484 GGTCAGTTAATCCCTGAACAAACG 60.083 45.833 5.06 0.00 44.38 3.60
1484 1534 2.208872 AGGCATGGTCAGTTAATCCCT 58.791 47.619 0.00 0.00 0.00 4.20
1487 1538 5.841957 AATGAAGGCATGGTCAGTTAATC 57.158 39.130 0.00 0.00 34.26 1.75
1502 1553 1.542915 CAGACCAGGCACAAATGAAGG 59.457 52.381 0.00 0.00 0.00 3.46
1528 1579 4.741928 TGCTATCTACTCCACTCCCATA 57.258 45.455 0.00 0.00 0.00 2.74
1530 1581 3.619900 ATGCTATCTACTCCACTCCCA 57.380 47.619 0.00 0.00 0.00 4.37
1531 1582 3.007398 CCAATGCTATCTACTCCACTCCC 59.993 52.174 0.00 0.00 0.00 4.30
1553 1606 2.234414 ACCAATGATTGCACATCCAACC 59.766 45.455 0.00 0.00 0.00 3.77
1555 1608 3.306849 CCAACCAATGATTGCACATCCAA 60.307 43.478 0.00 0.00 0.00 3.53
1562 1615 2.607499 AGTTCCCAACCAATGATTGCA 58.393 42.857 0.00 0.00 0.00 4.08
1664 1718 7.494952 TGATGAAGAGAAGCTCAATCAATACTG 59.505 37.037 0.00 0.00 34.23 2.74
1706 1760 4.510167 ACCCATGAATAGAAGGAGTTGG 57.490 45.455 0.00 0.00 0.00 3.77
1799 1853 5.433526 GGCTACACCCATGAATACAAGTAA 58.566 41.667 0.00 0.00 0.00 2.24
1800 1854 4.442332 CGGCTACACCCATGAATACAAGTA 60.442 45.833 0.00 0.00 33.26 2.24
1823 1877 5.226194 AGGCTCAATTGATCCTATCACTC 57.774 43.478 25.78 0.18 38.77 3.51
1882 1936 2.232941 CACAGCCCTGCAGAAATGAATT 59.767 45.455 17.39 0.00 0.00 2.17
1887 1941 0.957395 CGTCACAGCCCTGCAGAAAT 60.957 55.000 17.39 0.00 0.00 2.17
1916 1970 0.040058 AGCCAAGGATGAACCATGCA 59.960 50.000 0.00 0.00 42.04 3.96
1931 1985 2.602676 GCAACCAGGGACCTAGCCA 61.603 63.158 0.00 0.00 0.00 4.75
1968 2022 2.172505 ACCACAACTGGAGATGACACAA 59.827 45.455 0.00 0.00 40.55 3.33
1996 2050 1.142870 GCCACTACTAATCATGCCCCA 59.857 52.381 0.00 0.00 0.00 4.96
2060 2115 1.456287 GGAAGGGCAGAACCACACT 59.544 57.895 0.00 0.00 42.05 3.55
2114 2169 4.439153 CCATTTCAGTGTCCAAATCGATGG 60.439 45.833 0.00 0.00 42.12 3.51
2279 2334 2.025226 AGGTGTCCTCGATCCTGTAGAA 60.025 50.000 0.00 0.00 0.00 2.10
2445 2500 4.993584 CGCATGGCTGTCTCTAAAATATCT 59.006 41.667 0.00 0.00 0.00 1.98
2447 2502 4.708177 ACGCATGGCTGTCTCTAAAATAT 58.292 39.130 0.00 0.00 0.00 1.28
2483 2538 6.985188 TCAATTCTTAATCCTTGGAAGTCG 57.015 37.500 0.00 0.00 0.00 4.18
2569 2627 0.475044 AAAGCCCACAACCCTCGTTA 59.525 50.000 0.00 0.00 0.00 3.18
2573 2631 1.546029 GATTCAAAGCCCACAACCCTC 59.454 52.381 0.00 0.00 0.00 4.30
2682 2740 3.192212 CCTTTCCTTGCCTGAAGTTCATC 59.808 47.826 5.91 2.33 0.00 2.92
2717 2775 8.401490 ACTTTCTAGAGAGCACATTTTTCAAT 57.599 30.769 10.13 0.00 0.00 2.57
2751 2809 8.579850 TCACCAGAAGCAATATTCAGTAAATT 57.420 30.769 0.00 0.00 0.00 1.82
2755 2813 5.528690 GCATCACCAGAAGCAATATTCAGTA 59.471 40.000 0.00 0.00 38.31 2.74
2802 2860 5.540719 AGCCAGAACTGTAGAGTTTCTTACT 59.459 40.000 6.73 0.00 42.80 2.24
2944 3002 1.067295 AGGGCCATCAGTGAAGTGAA 58.933 50.000 6.18 0.00 0.00 3.18
2948 3006 3.356529 AGTAAAGGGCCATCAGTGAAG 57.643 47.619 6.18 0.00 0.00 3.02
3080 3138 3.895232 TGCCTTGGAGATTCTGTAGTC 57.105 47.619 0.00 0.00 0.00 2.59
3088 3146 6.189859 TCTTTCATTACATGCCTTGGAGATT 58.810 36.000 0.00 0.00 0.00 2.40
3129 3187 4.225267 TCCTCCCTGTTCCTTCAAATCTAC 59.775 45.833 0.00 0.00 0.00 2.59
3165 3223 3.898123 TCCTCTAACACATCTAGCATCCC 59.102 47.826 0.00 0.00 0.00 3.85
3283 3341 0.609151 TCCATAACCAACTCGCGGAA 59.391 50.000 6.13 0.00 0.00 4.30
3368 3426 9.884636 TGATTATCTTTTCCATAAGAAAGTCGA 57.115 29.630 0.00 0.00 45.11 4.20
3441 3500 6.817765 TGAAATTCAACAGTCAATACCCTC 57.182 37.500 0.00 0.00 0.00 4.30
3463 3522 5.591472 TGCATCCACAGAGAATTAAGGAATG 59.409 40.000 0.00 0.00 0.00 2.67
3569 3628 0.317854 TATCCTCGTCGATGCTTGCG 60.318 55.000 0.00 0.00 0.00 4.85
3602 3661 9.770097 CTACCAGCAAGATCAATAGAAGAATAA 57.230 33.333 0.00 0.00 0.00 1.40
3690 3749 4.142730 GCGACTCTTTGCTGATCTTGAATT 60.143 41.667 0.00 0.00 0.00 2.17
3769 3828 6.916387 GCACAAGAACAAATATCATCATGAGG 59.084 38.462 0.00 0.00 0.00 3.86
3778 3837 9.934190 AAAACAAAATGCACAAGAACAAATATC 57.066 25.926 0.00 0.00 0.00 1.63
3859 3920 4.666655 CGACGCTTATTTTGGAACAGAGTG 60.667 45.833 0.00 0.00 42.39 3.51
3861 3922 3.432252 ACGACGCTTATTTTGGAACAGAG 59.568 43.478 0.00 0.00 42.39 3.35
3863 3924 3.059188 ACACGACGCTTATTTTGGAACAG 60.059 43.478 0.00 0.00 42.39 3.16
3864 3925 2.873472 ACACGACGCTTATTTTGGAACA 59.127 40.909 0.00 0.00 0.00 3.18
3865 3926 3.531262 ACACGACGCTTATTTTGGAAC 57.469 42.857 0.00 0.00 0.00 3.62
3866 3927 4.529446 GAAACACGACGCTTATTTTGGAA 58.471 39.130 0.00 0.00 0.00 3.53
3867 3928 3.058777 GGAAACACGACGCTTATTTTGGA 60.059 43.478 0.00 0.00 0.00 3.53
3868 3929 3.058501 AGGAAACACGACGCTTATTTTGG 60.059 43.478 0.00 0.00 0.00 3.28
3869 3930 4.141855 AGGAAACACGACGCTTATTTTG 57.858 40.909 0.00 0.00 0.00 2.44
3870 3931 4.823790 AAGGAAACACGACGCTTATTTT 57.176 36.364 0.00 0.00 0.00 1.82
3871 3932 4.823790 AAAGGAAACACGACGCTTATTT 57.176 36.364 0.00 0.00 0.00 1.40
3872 3933 7.306399 CGATATAAAGGAAACACGACGCTTATT 60.306 37.037 0.00 0.00 0.00 1.40
3873 3934 6.143438 CGATATAAAGGAAACACGACGCTTAT 59.857 38.462 0.00 0.00 0.00 1.73
3874 3935 5.456497 CGATATAAAGGAAACACGACGCTTA 59.544 40.000 0.00 0.00 0.00 3.09
3875 3936 4.266976 CGATATAAAGGAAACACGACGCTT 59.733 41.667 0.00 0.00 0.00 4.68
3876 3937 3.795101 CGATATAAAGGAAACACGACGCT 59.205 43.478 0.00 0.00 0.00 5.07
3877 3938 3.600909 GCGATATAAAGGAAACACGACGC 60.601 47.826 0.00 0.00 35.06 5.19
3878 3939 3.548668 TGCGATATAAAGGAAACACGACG 59.451 43.478 0.00 0.00 0.00 5.12
3879 3940 5.652744 ATGCGATATAAAGGAAACACGAC 57.347 39.130 0.00 0.00 0.00 4.34
3880 3941 6.314152 TCAAATGCGATATAAAGGAAACACGA 59.686 34.615 0.00 0.00 0.00 4.35
3881 3942 6.410914 GTCAAATGCGATATAAAGGAAACACG 59.589 38.462 0.00 0.00 0.00 4.49
3882 3943 7.247728 TGTCAAATGCGATATAAAGGAAACAC 58.752 34.615 0.00 0.00 0.00 3.32
3883 3944 7.384439 TGTCAAATGCGATATAAAGGAAACA 57.616 32.000 0.00 0.00 0.00 2.83
3884 3945 7.968405 ACTTGTCAAATGCGATATAAAGGAAAC 59.032 33.333 0.00 0.00 0.00 2.78
3885 3946 8.050778 ACTTGTCAAATGCGATATAAAGGAAA 57.949 30.769 0.00 0.00 0.00 3.13
3886 3947 7.335673 TGACTTGTCAAATGCGATATAAAGGAA 59.664 33.333 0.44 0.00 0.00 3.36
3887 3948 6.821160 TGACTTGTCAAATGCGATATAAAGGA 59.179 34.615 0.44 0.00 0.00 3.36
3888 3949 7.015226 TGACTTGTCAAATGCGATATAAAGG 57.985 36.000 0.44 0.00 0.00 3.11
3889 3950 8.124823 ACATGACTTGTCAAATGCGATATAAAG 58.875 33.333 7.57 0.00 30.89 1.85
3890 3951 7.984391 ACATGACTTGTCAAATGCGATATAAA 58.016 30.769 7.57 0.00 30.89 1.40
3891 3952 7.552458 ACATGACTTGTCAAATGCGATATAA 57.448 32.000 7.57 0.00 30.89 0.98
3892 3953 7.279758 TCAACATGACTTGTCAAATGCGATATA 59.720 33.333 7.57 0.00 37.68 0.86
3898 3959 6.201425 ACAATTCAACATGACTTGTCAAATGC 59.799 34.615 7.57 0.00 43.72 3.56
3910 3971 5.302568 AGAAAAGGCAGACAATTCAACATGA 59.697 36.000 0.00 0.00 0.00 3.07
3914 3975 5.591099 TGAAGAAAAGGCAGACAATTCAAC 58.409 37.500 0.00 0.00 0.00 3.18
3918 3979 5.360714 TCTGTTGAAGAAAAGGCAGACAATT 59.639 36.000 0.00 0.00 29.54 2.32
3932 3993 5.705441 ACAGAGTTGTGTTTTCTGTTGAAGA 59.295 36.000 0.81 0.00 46.89 2.87
4194 4255 2.922740 TGTGTACCTTGGTTCCAGAC 57.077 50.000 0.00 0.00 0.00 3.51
4265 4326 6.697019 GTGTTTTGGCGCAATATCAGAATAAT 59.303 34.615 10.83 0.00 0.00 1.28
4273 4340 4.388469 ACATTTGTGTTTTGGCGCAATATC 59.612 37.500 10.83 0.00 38.45 1.63
4274 4341 4.152045 CACATTTGTGTTTTGGCGCAATAT 59.848 37.500 10.83 0.00 40.96 1.28
4275 4342 3.492383 CACATTTGTGTTTTGGCGCAATA 59.508 39.130 10.83 0.00 40.96 1.90
4277 4344 1.662629 CACATTTGTGTTTTGGCGCAA 59.337 42.857 10.83 0.00 40.96 4.85
4278 4345 1.284657 CACATTTGTGTTTTGGCGCA 58.715 45.000 10.83 0.00 40.96 6.09
4279 4346 3.875737 AAGCACATTTGTGTTTTGGCGC 61.876 45.455 11.99 0.00 45.08 6.53
4280 4347 1.932511 AAGCACATTTGTGTTTTGGCG 59.067 42.857 11.99 0.00 45.08 5.69
4334 4401 5.083821 AGGGCAAAAGTTATAGCTTGGAAA 58.916 37.500 2.26 0.00 0.00 3.13
4340 4407 5.117406 AGCTAAGGGCAAAAGTTATAGCT 57.883 39.130 0.00 0.00 44.79 3.32
4349 4416 3.169512 AGGCTAAAGCTAAGGGCAAAA 57.830 42.857 1.39 0.00 44.79 2.44
4353 4420 2.943690 GTGTAAGGCTAAAGCTAAGGGC 59.056 50.000 1.39 0.00 41.70 5.19
4385 4456 6.015856 AGTGAGTATATGAGGACACACTATGC 60.016 42.308 5.07 0.00 43.03 3.14
4405 4491 8.804912 ACCCGGTTAGTTATAGATATAGTGAG 57.195 38.462 0.00 0.00 0.00 3.51
4420 4506 0.616891 CCTTAGGCAACCCGGTTAGT 59.383 55.000 1.43 0.00 35.76 2.24
4425 4511 1.749258 GCTTCCTTAGGCAACCCGG 60.749 63.158 0.00 0.00 35.76 5.73
4443 4529 4.400884 TCCTCTCTCTTTCAATCTTCCTCG 59.599 45.833 0.00 0.00 0.00 4.63
4461 4547 2.815308 CGGCTGCCGTATTCCTCT 59.185 61.111 31.72 0.00 42.73 3.69
4478 4580 7.550906 AGAAAAAGTCTCCATGTAATCTAGCAC 59.449 37.037 0.00 0.00 0.00 4.40
4525 4643 6.601613 TCCATACAGATAACATGGTCAAAACC 59.398 38.462 0.00 0.00 46.66 3.27
4567 4689 2.107366 GGGGAACAGGAAGAGAGAGAG 58.893 57.143 0.00 0.00 0.00 3.20
4646 4771 7.695480 TTAAGTTAAGGCATGCACTAAATGA 57.305 32.000 21.36 5.77 0.00 2.57
4659 4784 6.097356 GCCATGGTACTTTTTAAGTTAAGGC 58.903 40.000 14.67 0.00 42.81 4.35
4920 5048 2.092429 TCCTCCTTGTGCAAGTTCACTT 60.092 45.455 10.56 0.00 37.81 3.16
4936 5064 3.914426 TTCCAAGCATAGAGTTCCTCC 57.086 47.619 0.00 0.00 0.00 4.30
5022 5151 3.846383 GCAGTCTGCGAAGACAAAGAAAC 60.846 47.826 25.49 2.86 41.02 2.78
5053 5182 2.244651 AGTTGAGTTGCACGTCCGC 61.245 57.895 0.00 0.00 0.00 5.54
5170 5299 8.833493 CAGCAACAATCATCAGAATCAGTATTA 58.167 33.333 0.00 0.00 0.00 0.98
5312 5441 0.541863 GAGGATTTCTTGGAGGCGGA 59.458 55.000 0.00 0.00 0.00 5.54
5320 5449 8.066595 CGTAGCATAGATTTTGAGGATTTCTTG 58.933 37.037 0.00 0.00 0.00 3.02
5467 5596 1.125633 TTAGGATGGTTACCTCGCCC 58.874 55.000 2.07 0.00 38.76 6.13
5509 5638 7.418337 AAAAAGAAAACCTGGAAGAAAGCTA 57.582 32.000 0.00 0.00 34.07 3.32
5540 5669 4.457257 AGGTCTTCTAAATTGCAAGCTGAC 59.543 41.667 4.94 6.19 0.00 3.51
5589 5718 7.093814 ACCAACAAGAGAGCAATTATTTATGCA 60.094 33.333 0.00 0.00 44.95 3.96
5599 5728 3.438087 CGATCAACCAACAAGAGAGCAAT 59.562 43.478 0.00 0.00 0.00 3.56
5645 5774 3.057033 AGCTGCAACAGAAATGGAATCAC 60.057 43.478 1.02 0.00 32.44 3.06
5683 5812 1.075601 ACTTGGGATCAGCAGGGAAA 58.924 50.000 0.00 0.00 0.00 3.13
5734 5863 2.130395 CACAGGCTATACATGACAGCG 58.870 52.381 0.00 0.00 36.12 5.18
5864 5995 5.388944 GCAGAAGCAGAAATACAGAAAGTG 58.611 41.667 0.00 0.00 41.58 3.16
5950 6081 3.318557 GGGACGGAAGGAGTATAAGACAG 59.681 52.174 0.00 0.00 0.00 3.51
5964 6095 4.360951 AGACACTTATTTTGGGACGGAA 57.639 40.909 0.00 0.00 0.00 4.30
5967 6098 6.796705 AGTTAAGACACTTATTTTGGGACG 57.203 37.500 0.00 0.00 0.00 4.79
6017 6148 9.856162 TCCCAAAATAACTGTCTTAACTTTAGT 57.144 29.630 0.00 0.00 0.00 2.24
6019 6150 8.776470 CGTCCCAAAATAACTGTCTTAACTTTA 58.224 33.333 0.00 0.00 0.00 1.85
6020 6151 7.255346 CCGTCCCAAAATAACTGTCTTAACTTT 60.255 37.037 0.00 0.00 0.00 2.66
6021 6152 6.206048 CCGTCCCAAAATAACTGTCTTAACTT 59.794 38.462 0.00 0.00 0.00 2.66
6022 6153 5.704053 CCGTCCCAAAATAACTGTCTTAACT 59.296 40.000 0.00 0.00 0.00 2.24
6023 6154 5.702209 TCCGTCCCAAAATAACTGTCTTAAC 59.298 40.000 0.00 0.00 0.00 2.01
6026 6157 4.324267 CTCCGTCCCAAAATAACTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
6029 6160 2.290705 CCCTCCGTCCCAAAATAACTGT 60.291 50.000 0.00 0.00 0.00 3.55
6032 6163 2.026542 ACTCCCTCCGTCCCAAAATAAC 60.027 50.000 0.00 0.00 0.00 1.89
6078 6213 6.868339 CCCAAATTACTTGTCTTTGATTGTCC 59.132 38.462 9.07 0.00 32.83 4.02
6086 6221 6.382859 ACCTTTGTCCCAAATTACTTGTCTTT 59.617 34.615 0.00 0.00 32.65 2.52
6107 6242 7.882791 TCATGATCCGCAATATTGTATTACCTT 59.117 33.333 16.61 0.00 0.00 3.50
6123 6258 5.348724 ACGATACACAATATTCATGATCCGC 59.651 40.000 0.00 0.00 0.00 5.54
6171 6307 1.369625 GCTTGGATGTGGAAGTACCG 58.630 55.000 0.00 0.00 42.61 4.02
6175 6311 1.671850 CGTACGCTTGGATGTGGAAGT 60.672 52.381 0.52 0.00 0.00 3.01
6176 6312 0.999406 CGTACGCTTGGATGTGGAAG 59.001 55.000 0.52 0.00 0.00 3.46
6177 6313 0.319083 ACGTACGCTTGGATGTGGAA 59.681 50.000 16.72 0.00 0.00 3.53
6178 6314 1.135315 GTACGTACGCTTGGATGTGGA 60.135 52.381 16.72 0.00 0.00 4.02
6179 6315 1.135199 AGTACGTACGCTTGGATGTGG 60.135 52.381 19.49 0.00 0.00 4.17
6180 6316 2.159421 AGAGTACGTACGCTTGGATGTG 60.159 50.000 24.00 0.00 32.26 3.21
6181 6317 2.089980 AGAGTACGTACGCTTGGATGT 58.910 47.619 24.00 2.11 32.26 3.06
6182 6318 2.096980 TGAGAGTACGTACGCTTGGATG 59.903 50.000 28.83 0.00 36.46 3.51
6183 6319 2.355132 CTGAGAGTACGTACGCTTGGAT 59.645 50.000 28.83 10.28 36.46 3.41
6184 6320 1.736126 CTGAGAGTACGTACGCTTGGA 59.264 52.381 28.83 16.66 36.46 3.53
6185 6321 1.467734 ACTGAGAGTACGTACGCTTGG 59.532 52.381 28.83 24.42 36.46 3.61
6186 6322 2.771689 GACTGAGAGTACGTACGCTTG 58.228 52.381 28.83 24.81 36.46 4.01
6308 6472 8.862325 TGTGAAAAGTACCATCTCAAATATGT 57.138 30.769 0.00 0.00 0.00 2.29
6314 6478 7.103641 GGTAGATGTGAAAAGTACCATCTCAA 58.896 38.462 11.75 0.00 42.19 3.02
6316 6480 6.640518 TGGTAGATGTGAAAAGTACCATCTC 58.359 40.000 11.75 6.13 42.19 2.75
6317 6481 6.620877 TGGTAGATGTGAAAAGTACCATCT 57.379 37.500 12.67 12.67 44.52 2.90
6320 6484 6.367374 TCATGGTAGATGTGAAAAGTACCA 57.633 37.500 2.17 2.17 45.50 3.25
6340 6506 5.246677 CGAAGACGTACGAAACTTTTCAT 57.753 39.130 24.41 0.00 34.45 2.57
6367 6533 1.859427 GCTCCAGACCACGTACGACA 61.859 60.000 24.41 0.00 0.00 4.35
6368 6534 1.154073 GCTCCAGACCACGTACGAC 60.154 63.158 24.41 10.02 0.00 4.34
6369 6535 0.892358 AAGCTCCAGACCACGTACGA 60.892 55.000 24.41 0.00 0.00 3.43
6370 6536 0.456312 GAAGCTCCAGACCACGTACG 60.456 60.000 15.01 15.01 0.00 3.67
6434 9283 5.587388 ATCACATGGAGCAACTATTTTGG 57.413 39.130 0.00 0.00 0.00 3.28
6477 9326 5.158141 AGAGCAGGATGGGACTATTGATTA 58.842 41.667 0.00 0.00 35.86 1.75
6492 9341 8.310382 GCTAAGATATGATCTAAAAGAGCAGGA 58.690 37.037 1.13 0.00 44.49 3.86
6649 12458 3.132289 GGGCACTCAGCTAGTTGTATGTA 59.868 47.826 6.47 0.00 44.79 2.29
6650 12459 2.093447 GGGCACTCAGCTAGTTGTATGT 60.093 50.000 6.47 2.28 44.79 2.29
6651 12460 2.555199 GGGCACTCAGCTAGTTGTATG 58.445 52.381 6.47 7.35 44.79 2.39
6652 12461 1.137086 CGGGCACTCAGCTAGTTGTAT 59.863 52.381 6.47 0.00 44.79 2.29
6653 12462 0.530744 CGGGCACTCAGCTAGTTGTA 59.469 55.000 6.47 0.00 44.79 2.41
6654 12463 1.293498 CGGGCACTCAGCTAGTTGT 59.707 57.895 6.47 0.00 44.79 3.32
6655 12464 1.016130 CACGGGCACTCAGCTAGTTG 61.016 60.000 0.00 0.00 44.79 3.16
6656 12465 1.293498 CACGGGCACTCAGCTAGTT 59.707 57.895 0.00 0.00 44.79 2.24
6657 12466 2.973899 CACGGGCACTCAGCTAGT 59.026 61.111 0.00 0.00 44.79 2.57
6658 12467 2.510238 GCACGGGCACTCAGCTAG 60.510 66.667 3.77 0.00 44.79 3.42
6659 12468 4.435436 CGCACGGGCACTCAGCTA 62.435 66.667 11.77 0.00 44.79 3.32
6662 12471 3.716006 CAACGCACGGGCACTCAG 61.716 66.667 11.77 0.00 41.24 3.35
6676 12485 7.704899 AGCTTTTATTTATTATTCCGTGGCAAC 59.295 33.333 0.00 0.00 0.00 4.17
6677 12486 7.777095 AGCTTTTATTTATTATTCCGTGGCAA 58.223 30.769 0.00 0.00 0.00 4.52
6678 12487 7.341445 AGCTTTTATTTATTATTCCGTGGCA 57.659 32.000 0.00 0.00 0.00 4.92
6733 12542 6.490721 ACCCTTGATACGGACATTTGTAAAAA 59.509 34.615 0.00 0.00 0.00 1.94
6734 12543 6.005198 ACCCTTGATACGGACATTTGTAAAA 58.995 36.000 0.00 0.00 0.00 1.52
6735 12544 5.562635 ACCCTTGATACGGACATTTGTAAA 58.437 37.500 0.00 0.00 0.00 2.01
6736 12545 5.168647 ACCCTTGATACGGACATTTGTAA 57.831 39.130 0.00 0.00 0.00 2.41
6737 12546 4.829872 ACCCTTGATACGGACATTTGTA 57.170 40.909 0.00 0.00 0.00 2.41
6738 12547 3.713826 ACCCTTGATACGGACATTTGT 57.286 42.857 0.00 0.00 0.00 2.83
6739 12548 5.588648 ACATTACCCTTGATACGGACATTTG 59.411 40.000 0.00 0.00 0.00 2.32
6740 12549 5.588648 CACATTACCCTTGATACGGACATTT 59.411 40.000 0.00 0.00 0.00 2.32
6741 12550 5.123227 CACATTACCCTTGATACGGACATT 58.877 41.667 0.00 0.00 0.00 2.71
6742 12551 4.163458 ACACATTACCCTTGATACGGACAT 59.837 41.667 0.00 0.00 0.00 3.06
6743 12552 3.516300 ACACATTACCCTTGATACGGACA 59.484 43.478 0.00 0.00 0.00 4.02
6744 12553 4.133013 ACACATTACCCTTGATACGGAC 57.867 45.455 0.00 0.00 0.00 4.79
6745 12554 5.740803 GCATACACATTACCCTTGATACGGA 60.741 44.000 0.00 0.00 0.00 4.69
6746 12555 4.451096 GCATACACATTACCCTTGATACGG 59.549 45.833 0.00 0.00 0.00 4.02
6747 12556 4.149922 CGCATACACATTACCCTTGATACG 59.850 45.833 0.00 0.00 0.00 3.06
6748 12557 5.294356 TCGCATACACATTACCCTTGATAC 58.706 41.667 0.00 0.00 0.00 2.24
6749 12558 5.538849 TCGCATACACATTACCCTTGATA 57.461 39.130 0.00 0.00 0.00 2.15
6750 12559 4.415881 TCGCATACACATTACCCTTGAT 57.584 40.909 0.00 0.00 0.00 2.57
6751 12560 3.897141 TCGCATACACATTACCCTTGA 57.103 42.857 0.00 0.00 0.00 3.02
6752 12561 3.876914 ACATCGCATACACATTACCCTTG 59.123 43.478 0.00 0.00 0.00 3.61
6753 12562 4.127171 GACATCGCATACACATTACCCTT 58.873 43.478 0.00 0.00 0.00 3.95
6754 12563 3.388024 AGACATCGCATACACATTACCCT 59.612 43.478 0.00 0.00 0.00 4.34
6755 12564 3.494626 CAGACATCGCATACACATTACCC 59.505 47.826 0.00 0.00 0.00 3.69
6756 12565 4.119862 ACAGACATCGCATACACATTACC 58.880 43.478 0.00 0.00 0.00 2.85
6757 12566 5.043903 AGACAGACATCGCATACACATTAC 58.956 41.667 0.00 0.00 0.00 1.89
6758 12567 5.262588 AGACAGACATCGCATACACATTA 57.737 39.130 0.00 0.00 0.00 1.90
6759 12568 4.128925 AGACAGACATCGCATACACATT 57.871 40.909 0.00 0.00 0.00 2.71
6760 12569 3.808466 AGACAGACATCGCATACACAT 57.192 42.857 0.00 0.00 0.00 3.21
6761 12570 4.580580 AGATAGACAGACATCGCATACACA 59.419 41.667 0.00 0.00 0.00 3.72
6762 12571 5.114785 AGATAGACAGACATCGCATACAC 57.885 43.478 0.00 0.00 0.00 2.90
6763 12572 6.710744 TCTTAGATAGACAGACATCGCATACA 59.289 38.462 0.00 0.00 0.00 2.29
6764 12573 7.135089 TCTTAGATAGACAGACATCGCATAC 57.865 40.000 0.00 0.00 0.00 2.39
6765 12574 7.745620 TTCTTAGATAGACAGACATCGCATA 57.254 36.000 0.00 0.00 30.90 3.14
6766 12575 6.641169 TTCTTAGATAGACAGACATCGCAT 57.359 37.500 0.00 0.00 30.90 4.73
6767 12576 6.641169 ATTCTTAGATAGACAGACATCGCA 57.359 37.500 0.00 0.00 30.90 5.10
6768 12577 7.938563 AAATTCTTAGATAGACAGACATCGC 57.061 36.000 0.00 0.00 30.90 4.58
6801 12610 9.675464 ACAATAAGATTAATGTAAAACGAGGGA 57.325 29.630 0.00 0.00 0.00 4.20
6802 12611 9.716507 CACAATAAGATTAATGTAAAACGAGGG 57.283 33.333 0.00 0.00 0.00 4.30
6821 12630 9.906660 GGTCATTTTATGAGAAACACACAATAA 57.093 29.630 0.00 0.00 40.53 1.40
6822 12631 8.519526 GGGTCATTTTATGAGAAACACACAATA 58.480 33.333 0.00 0.00 40.53 1.90
6823 12632 7.378181 GGGTCATTTTATGAGAAACACACAAT 58.622 34.615 0.00 0.00 40.53 2.71
6824 12633 6.514212 CGGGTCATTTTATGAGAAACACACAA 60.514 38.462 0.00 0.00 40.53 3.33
6825 12634 5.049060 CGGGTCATTTTATGAGAAACACACA 60.049 40.000 0.00 0.00 40.53 3.72
6826 12635 5.048991 ACGGGTCATTTTATGAGAAACACAC 60.049 40.000 0.00 0.00 40.53 3.82
6827 12636 5.067273 ACGGGTCATTTTATGAGAAACACA 58.933 37.500 0.00 0.00 40.53 3.72
6828 12637 5.622770 ACGGGTCATTTTATGAGAAACAC 57.377 39.130 0.00 0.00 40.53 3.32
6829 12638 5.533154 ACAACGGGTCATTTTATGAGAAACA 59.467 36.000 0.00 0.00 40.53 2.83
6830 12639 6.009115 ACAACGGGTCATTTTATGAGAAAC 57.991 37.500 0.00 0.00 40.53 2.78
6831 12640 7.608376 TGATACAACGGGTCATTTTATGAGAAA 59.392 33.333 0.00 0.00 40.53 2.52
6832 12641 7.106890 TGATACAACGGGTCATTTTATGAGAA 58.893 34.615 0.00 0.00 40.53 2.87
6833 12642 6.645306 TGATACAACGGGTCATTTTATGAGA 58.355 36.000 0.00 0.00 40.53 3.27
6834 12643 6.918892 TGATACAACGGGTCATTTTATGAG 57.081 37.500 0.00 0.00 40.53 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.