Multiple sequence alignment - TraesCS7B01G158400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G158400 chr7B 100.000 5413 0 0 1 5413 213899419 213904831 0.000000e+00 9997.0
1 TraesCS7B01G158400 chr7B 93.846 455 24 4 1001 1453 375206295 375206747 0.000000e+00 682.0
2 TraesCS7B01G158400 chr7B 93.362 467 17 2 1002 1454 79732029 79732495 0.000000e+00 678.0
3 TraesCS7B01G158400 chr7B 92.521 468 19 10 1001 1453 713467023 713466557 0.000000e+00 656.0
4 TraesCS7B01G158400 chr7B 97.872 141 3 0 5273 5413 578203013 578202873 1.510000e-60 244.0
5 TraesCS7B01G158400 chr7B 97.778 135 3 0 5279 5413 721687553 721687687 3.260000e-57 233.0
6 TraesCS7B01G158400 chr7D 94.233 3867 144 38 1456 5269 237388859 237392699 0.000000e+00 5832.0
7 TraesCS7B01G158400 chr7D 88.791 455 43 8 1003 1452 429472761 429473212 7.920000e-153 551.0
8 TraesCS7B01G158400 chr7D 88.835 206 16 2 226 430 237388255 237388454 4.190000e-61 246.0
9 TraesCS7B01G158400 chr7D 97.872 141 3 0 5273 5413 1148745 1148605 1.510000e-60 244.0
10 TraesCS7B01G158400 chr7D 88.957 163 8 6 848 1002 237388704 237388864 5.530000e-45 193.0
11 TraesCS7B01G158400 chr7A 92.958 2258 103 20 1454 3665 252536068 252538315 0.000000e+00 3238.0
12 TraesCS7B01G158400 chr7A 95.272 846 35 3 3807 4647 252538504 252539349 0.000000e+00 1336.0
13 TraesCS7B01G158400 chr7A 89.951 607 47 7 2 607 252535235 252535828 0.000000e+00 771.0
14 TraesCS7B01G158400 chr7A 92.934 467 16 4 1004 1453 49946897 49946431 0.000000e+00 664.0
15 TraesCS7B01G158400 chr7A 87.956 274 9 5 731 1002 252535824 252536075 8.810000e-78 302.0
16 TraesCS7B01G158400 chr7A 96.512 86 3 0 3733 3818 184126739 184126824 5.650000e-30 143.0
17 TraesCS7B01G158400 chr5A 93.177 469 14 3 1003 1453 340446903 340447371 0.000000e+00 673.0
18 TraesCS7B01G158400 chr2D 90.302 464 38 6 992 1452 266595056 266595515 7.760000e-168 601.0
19 TraesCS7B01G158400 chr2B 93.939 396 17 6 1070 1460 610913279 610912886 4.670000e-165 592.0
20 TraesCS7B01G158400 chr2B 97.222 144 1 1 5273 5413 425456715 425456858 1.950000e-59 241.0
21 TraesCS7B01G158400 chr2B 96.528 144 2 1 5273 5413 348746448 348746591 9.060000e-58 235.0
22 TraesCS7B01G158400 chr2B 95.455 88 4 0 3731 3818 691994784 691994697 2.030000e-29 141.0
23 TraesCS7B01G158400 chr4D 89.254 456 34 10 1003 1448 85265261 85264811 1.700000e-154 556.0
24 TraesCS7B01G158400 chr6A 88.662 441 44 5 1003 1440 488615266 488614829 2.870000e-147 532.0
25 TraesCS7B01G158400 chr6A 91.919 99 5 2 3733 3828 404687799 404687701 9.460000e-28 135.0
26 TraesCS7B01G158400 chr1A 85.391 486 42 13 986 1452 56613843 56614318 1.360000e-130 477.0
27 TraesCS7B01G158400 chr4A 98.540 137 2 0 5277 5413 659622461 659622325 5.420000e-60 243.0
28 TraesCS7B01G158400 chr4A 95.455 88 4 0 3731 3818 570916240 570916153 2.030000e-29 141.0
29 TraesCS7B01G158400 chr3B 99.242 132 1 0 5282 5413 720171991 720171860 7.010000e-59 239.0
30 TraesCS7B01G158400 chr3B 97.794 136 3 0 5278 5413 1482611 1482746 9.060000e-58 235.0
31 TraesCS7B01G158400 chr3B 97.500 40 1 0 4897 4936 252401045 252401084 9.730000e-08 69.4
32 TraesCS7B01G158400 chr5B 96.454 141 5 0 5273 5413 185539805 185539665 3.260000e-57 233.0
33 TraesCS7B01G158400 chr1D 95.556 90 4 0 3731 3820 341527485 341527574 1.570000e-30 145.0
34 TraesCS7B01G158400 chr6B 96.512 86 3 0 3733 3818 617177290 617177205 5.650000e-30 143.0
35 TraesCS7B01G158400 chr5D 94.444 90 5 0 3731 3820 52889698 52889609 7.310000e-29 139.0
36 TraesCS7B01G158400 chr6D 92.632 95 6 1 3733 3826 228929683 228929589 9.460000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G158400 chr7B 213899419 213904831 5412 False 9997.000000 9997 100.00000 1 5413 1 chr7B.!!$F2 5412
1 TraesCS7B01G158400 chr7D 237388255 237392699 4444 False 2090.333333 5832 90.67500 226 5269 3 chr7D.!!$F2 5043
2 TraesCS7B01G158400 chr7A 252535235 252539349 4114 False 1411.750000 3238 91.53425 2 4647 4 chr7A.!!$F2 4645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
500 502 0.103937 CTCCTCCTTGATCGTGGCTC 59.896 60.000 0.00 0.0 0.00 4.70 F
641 644 0.174617 CGGAGAGGAGCAAAGGAGAC 59.825 60.000 0.00 0.0 0.00 3.36 F
1362 1371 0.102844 GCACAGTACGGCCCGTATAA 59.897 55.000 20.41 0.0 44.12 0.98 F
2284 2303 0.169672 GACAATGCGCTGTGCTGAAT 59.830 50.000 14.92 0.0 46.63 2.57 F
2600 2619 0.535780 CTCTGGAGCAAGGCACAACA 60.536 55.000 0.00 0.0 0.00 3.33 F
2615 2635 1.474879 ACAACAACCAACCCACTTTCG 59.525 47.619 0.00 0.0 0.00 3.46 F
3569 3628 1.562672 GCTCAGGCCTAGGGGTGAAA 61.563 60.000 3.98 0.0 34.45 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1343 1352 0.102844 TTATACGGGCCGTACTGTGC 59.897 55.0 38.40 0.0 45.07 4.57 R
2260 2279 0.597118 GCACAGCGCATTGTCCAAAA 60.597 50.0 11.47 0.0 41.79 2.44 R
2934 2955 0.961753 CACCAACCTGCCTCCTTTTC 59.038 55.0 0.00 0.0 0.00 2.29 R
4023 4150 0.407528 TTGCATACCTTTCCCTGGCA 59.592 50.0 0.00 0.0 0.00 4.92 R
4120 4249 0.822164 GGCTTTCCAGGACTACGCTA 59.178 55.0 0.00 0.0 0.00 4.26 R
4121 4250 1.192146 TGGCTTTCCAGGACTACGCT 61.192 55.0 0.00 0.0 37.47 5.07 R
4982 5138 0.106719 AGGTCCATAAATGTGGCCGG 60.107 55.0 0.00 0.0 39.17 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.704616 CGAACAACACGCCACGTT 59.295 55.556 0.00 0.00 38.32 3.99
33 34 4.595538 ACGTTGCACCGCTTCCGA 62.596 61.111 2.56 0.00 36.29 4.55
62 63 2.737376 GGCGGTCACCTTGTCGAC 60.737 66.667 9.11 9.11 0.00 4.20
72 73 1.273606 ACCTTGTCGACTGTCATCCTG 59.726 52.381 17.92 0.00 0.00 3.86
116 117 3.127203 CCACCACTGTCGAGTTAGTAGAG 59.873 52.174 0.00 0.00 0.00 2.43
153 154 2.111251 GCAATCCTCGGGGTAGGC 59.889 66.667 0.00 0.00 36.51 3.93
154 155 2.742116 GCAATCCTCGGGGTAGGCA 61.742 63.158 0.00 0.00 36.51 4.75
155 156 1.447643 CAATCCTCGGGGTAGGCAG 59.552 63.158 0.00 0.00 36.51 4.85
158 159 4.162690 CCTCGGGGTAGGCAGTGC 62.163 72.222 6.55 6.55 0.00 4.40
181 182 1.339055 CCTCCTTCTTCATGTTCGCCA 60.339 52.381 0.00 0.00 0.00 5.69
230 231 2.831742 CTCCTTGCCGCATGCCAT 60.832 61.111 13.15 0.00 40.16 4.40
247 249 2.746142 GCCATCATGGTGGAGATTCGAA 60.746 50.000 29.73 0.00 42.02 3.71
341 343 1.112113 ATCCTTGACGTGGCTATCGT 58.888 50.000 0.00 3.16 44.27 3.73
398 400 3.930336 TCGAGCATGAACTCAATCTGTT 58.070 40.909 0.00 0.00 36.42 3.16
412 414 4.982295 TCAATCTGTTGTGTGTACTCTTCG 59.018 41.667 0.00 0.00 36.69 3.79
421 423 1.396301 GTGTACTCTTCGTCGATCCGT 59.604 52.381 0.00 0.00 0.00 4.69
464 466 3.123620 GCTGCTGCTCCTTGTCGG 61.124 66.667 8.53 0.00 36.03 4.79
494 496 0.176680 CACCACCTCCTCCTTGATCG 59.823 60.000 0.00 0.00 0.00 3.69
495 497 0.252284 ACCACCTCCTCCTTGATCGT 60.252 55.000 0.00 0.00 0.00 3.73
496 498 0.176680 CCACCTCCTCCTTGATCGTG 59.823 60.000 0.00 0.00 0.00 4.35
497 499 0.176680 CACCTCCTCCTTGATCGTGG 59.823 60.000 0.00 0.00 0.00 4.94
498 500 1.144936 CCTCCTCCTTGATCGTGGC 59.855 63.158 0.00 0.00 0.00 5.01
499 501 1.333636 CCTCCTCCTTGATCGTGGCT 61.334 60.000 0.00 0.00 0.00 4.75
500 502 0.103937 CTCCTCCTTGATCGTGGCTC 59.896 60.000 0.00 0.00 0.00 4.70
524 526 2.204461 TGTCGACGGTGTGGTGGAT 61.204 57.895 11.62 0.00 0.00 3.41
532 534 3.307108 TGTGGTGGATGCCGACGA 61.307 61.111 0.00 0.00 0.00 4.20
536 538 4.451150 GTGGATGCCGACGAGCCA 62.451 66.667 0.00 0.00 0.00 4.75
603 606 2.703798 CCTGCCGAACTTGCCCATG 61.704 63.158 0.00 0.00 0.00 3.66
610 613 1.530323 GAACTTGCCCATGTTACGGT 58.470 50.000 0.00 0.00 0.00 4.83
613 616 0.521291 CTTGCCCATGTTACGGTGTG 59.479 55.000 0.00 0.00 0.00 3.82
634 637 2.038007 AGGAGCGGAGAGGAGCAA 59.962 61.111 0.00 0.00 35.48 3.91
641 644 0.174617 CGGAGAGGAGCAAAGGAGAC 59.825 60.000 0.00 0.00 0.00 3.36
644 647 1.807573 GAGGAGCAAAGGAGACGCG 60.808 63.158 3.53 3.53 0.00 6.01
663 666 3.855159 GGGGGTGCACTAAGTACAG 57.145 57.895 17.98 0.00 34.11 2.74
673 676 5.176958 GTGCACTAAGTACAGTCGTGAATTT 59.823 40.000 10.32 0.00 32.52 1.82
717 720 7.878477 TCACTCAATTTCAATTTTCATCAGC 57.122 32.000 0.00 0.00 0.00 4.26
718 721 6.869913 TCACTCAATTTCAATTTTCATCAGCC 59.130 34.615 0.00 0.00 0.00 4.85
719 722 6.872020 CACTCAATTTCAATTTTCATCAGCCT 59.128 34.615 0.00 0.00 0.00 4.58
720 723 7.063074 CACTCAATTTCAATTTTCATCAGCCTC 59.937 37.037 0.00 0.00 0.00 4.70
721 724 7.039223 ACTCAATTTCAATTTTCATCAGCCTCT 60.039 33.333 0.00 0.00 0.00 3.69
722 725 7.318141 TCAATTTCAATTTTCATCAGCCTCTC 58.682 34.615 0.00 0.00 0.00 3.20
723 726 7.177921 TCAATTTCAATTTTCATCAGCCTCTCT 59.822 33.333 0.00 0.00 0.00 3.10
724 727 6.506500 TTTCAATTTTCATCAGCCTCTCTC 57.493 37.500 0.00 0.00 0.00 3.20
725 728 5.432680 TCAATTTTCATCAGCCTCTCTCT 57.567 39.130 0.00 0.00 0.00 3.10
726 729 6.550938 TCAATTTTCATCAGCCTCTCTCTA 57.449 37.500 0.00 0.00 0.00 2.43
727 730 7.134362 TCAATTTTCATCAGCCTCTCTCTAT 57.866 36.000 0.00 0.00 0.00 1.98
728 731 8.255111 TCAATTTTCATCAGCCTCTCTCTATA 57.745 34.615 0.00 0.00 0.00 1.31
729 732 8.878211 TCAATTTTCATCAGCCTCTCTCTATAT 58.122 33.333 0.00 0.00 0.00 0.86
880 883 4.433615 AGCTTGGTCGTGTGATATAACAG 58.566 43.478 0.00 0.00 0.00 3.16
884 887 6.679638 GCTTGGTCGTGTGATATAACAGACTA 60.680 42.308 16.22 11.12 32.98 2.59
944 948 3.963383 AATGAAATCGGGATAACGTGC 57.037 42.857 0.00 0.00 34.94 5.34
1003 1012 4.102815 TCGCCGCCCCTGCAATTA 62.103 61.111 0.00 0.00 37.32 1.40
1004 1013 2.906897 CGCCGCCCCTGCAATTAT 60.907 61.111 0.00 0.00 37.32 1.28
1005 1014 1.599518 CGCCGCCCCTGCAATTATA 60.600 57.895 0.00 0.00 37.32 0.98
1006 1015 1.577328 CGCCGCCCCTGCAATTATAG 61.577 60.000 0.00 0.00 37.32 1.31
1007 1016 1.866853 GCCGCCCCTGCAATTATAGC 61.867 60.000 0.00 0.00 37.32 2.97
1008 1017 0.250901 CCGCCCCTGCAATTATAGCT 60.251 55.000 0.00 0.00 37.32 3.32
1009 1018 1.003118 CCGCCCCTGCAATTATAGCTA 59.997 52.381 0.00 0.00 37.32 3.32
1010 1019 2.350522 CGCCCCTGCAATTATAGCTAG 58.649 52.381 0.00 0.00 37.32 3.42
1011 1020 2.087646 GCCCCTGCAATTATAGCTAGC 58.912 52.381 6.62 6.62 37.47 3.42
1012 1021 2.716217 CCCCTGCAATTATAGCTAGCC 58.284 52.381 12.13 0.00 0.00 3.93
1013 1022 2.040278 CCCCTGCAATTATAGCTAGCCA 59.960 50.000 12.13 0.00 0.00 4.75
1014 1023 3.498481 CCCCTGCAATTATAGCTAGCCAA 60.498 47.826 12.13 3.64 0.00 4.52
1015 1024 4.144297 CCCTGCAATTATAGCTAGCCAAA 58.856 43.478 12.13 3.64 0.00 3.28
1016 1025 4.768968 CCCTGCAATTATAGCTAGCCAAAT 59.231 41.667 12.13 6.04 0.00 2.32
1017 1026 5.336213 CCCTGCAATTATAGCTAGCCAAATG 60.336 44.000 12.13 7.93 0.00 2.32
1018 1027 5.336213 CCTGCAATTATAGCTAGCCAAATGG 60.336 44.000 12.13 7.62 38.53 3.16
1019 1028 4.523943 TGCAATTATAGCTAGCCAAATGGG 59.476 41.667 12.13 6.50 40.85 4.00
1166 1175 2.182537 GGCACGACCCGATTACGT 59.817 61.111 0.00 0.00 40.87 3.57
1167 1176 1.446618 GGCACGACCCGATTACGTT 60.447 57.895 0.00 0.00 38.18 3.99
1168 1177 1.015607 GGCACGACCCGATTACGTTT 61.016 55.000 0.00 0.00 38.18 3.60
1169 1178 1.627879 GCACGACCCGATTACGTTTA 58.372 50.000 0.00 0.00 38.18 2.01
1170 1179 2.195922 GCACGACCCGATTACGTTTAT 58.804 47.619 0.00 0.00 38.18 1.40
1171 1180 2.604462 GCACGACCCGATTACGTTTATT 59.396 45.455 0.00 0.00 38.18 1.40
1172 1181 3.062504 GCACGACCCGATTACGTTTATTT 59.937 43.478 0.00 0.00 38.18 1.40
1173 1182 4.435917 GCACGACCCGATTACGTTTATTTT 60.436 41.667 0.00 0.00 38.18 1.82
1174 1183 5.620467 CACGACCCGATTACGTTTATTTTT 58.380 37.500 0.00 0.00 38.18 1.94
1175 1184 6.671879 GCACGACCCGATTACGTTTATTTTTA 60.672 38.462 0.00 0.00 38.18 1.52
1176 1185 7.401080 CACGACCCGATTACGTTTATTTTTAT 58.599 34.615 0.00 0.00 38.18 1.40
1177 1186 7.904461 CACGACCCGATTACGTTTATTTTTATT 59.096 33.333 0.00 0.00 38.18 1.40
1178 1187 8.450180 ACGACCCGATTACGTTTATTTTTATTT 58.550 29.630 0.00 0.00 36.91 1.40
1179 1188 9.276397 CGACCCGATTACGTTTATTTTTATTTT 57.724 29.630 0.00 0.00 37.88 1.82
1218 1227 4.736126 AGCCCAACATGTAAAAATAGGC 57.264 40.909 0.00 4.25 38.16 3.93
1219 1228 4.352893 AGCCCAACATGTAAAAATAGGCT 58.647 39.130 0.00 6.57 43.21 4.58
1220 1229 5.515106 AGCCCAACATGTAAAAATAGGCTA 58.485 37.500 14.66 0.00 46.02 3.93
1221 1230 5.955355 AGCCCAACATGTAAAAATAGGCTAA 59.045 36.000 14.66 0.00 46.02 3.09
1222 1231 6.439058 AGCCCAACATGTAAAAATAGGCTAAA 59.561 34.615 14.66 0.00 46.02 1.85
1223 1232 7.038658 AGCCCAACATGTAAAAATAGGCTAAAA 60.039 33.333 14.66 0.00 46.02 1.52
1224 1233 7.604545 GCCCAACATGTAAAAATAGGCTAAAAA 59.395 33.333 0.00 0.00 35.00 1.94
1225 1234 8.931775 CCCAACATGTAAAAATAGGCTAAAAAC 58.068 33.333 0.00 0.00 0.00 2.43
1226 1235 8.643752 CCAACATGTAAAAATAGGCTAAAAACG 58.356 33.333 0.00 0.00 0.00 3.60
1227 1236 7.806149 ACATGTAAAAATAGGCTAAAAACGC 57.194 32.000 0.00 0.00 0.00 4.84
1228 1237 7.599171 ACATGTAAAAATAGGCTAAAAACGCT 58.401 30.769 0.00 0.00 0.00 5.07
1229 1238 7.753580 ACATGTAAAAATAGGCTAAAAACGCTC 59.246 33.333 0.00 0.00 0.00 5.03
1230 1239 7.204496 TGTAAAAATAGGCTAAAAACGCTCA 57.796 32.000 0.00 0.00 0.00 4.26
1231 1240 7.302524 TGTAAAAATAGGCTAAAAACGCTCAG 58.697 34.615 0.00 0.00 0.00 3.35
1232 1241 5.959618 AAAATAGGCTAAAAACGCTCAGT 57.040 34.783 0.00 0.00 0.00 3.41
1233 1242 4.946784 AATAGGCTAAAAACGCTCAGTG 57.053 40.909 0.00 0.00 0.00 3.66
1234 1243 2.256117 AGGCTAAAAACGCTCAGTGT 57.744 45.000 0.00 0.00 0.00 3.55
1235 1244 1.873591 AGGCTAAAAACGCTCAGTGTG 59.126 47.619 0.00 0.00 0.00 3.82
1236 1245 1.602377 GGCTAAAAACGCTCAGTGTGT 59.398 47.619 0.00 0.00 41.81 3.72
1237 1246 2.349532 GGCTAAAAACGCTCAGTGTGTC 60.350 50.000 0.00 0.00 38.63 3.67
1238 1247 2.286833 GCTAAAAACGCTCAGTGTGTCA 59.713 45.455 0.00 0.00 38.63 3.58
1239 1248 3.242608 GCTAAAAACGCTCAGTGTGTCAA 60.243 43.478 0.00 0.00 38.63 3.18
1240 1249 3.840890 AAAAACGCTCAGTGTGTCAAA 57.159 38.095 0.00 0.00 38.63 2.69
1241 1250 4.370364 AAAAACGCTCAGTGTGTCAAAT 57.630 36.364 0.00 0.00 38.63 2.32
1242 1251 5.493133 AAAAACGCTCAGTGTGTCAAATA 57.507 34.783 0.00 0.00 38.63 1.40
1243 1252 5.493133 AAAACGCTCAGTGTGTCAAATAA 57.507 34.783 0.00 0.00 38.63 1.40
1244 1253 4.468095 AACGCTCAGTGTGTCAAATAAC 57.532 40.909 0.00 0.00 38.63 1.89
1245 1254 3.462982 ACGCTCAGTGTGTCAAATAACA 58.537 40.909 0.00 0.00 33.56 2.41
1246 1255 3.494626 ACGCTCAGTGTGTCAAATAACAG 59.505 43.478 0.00 0.00 33.56 3.16
1247 1256 3.120546 CGCTCAGTGTGTCAAATAACAGG 60.121 47.826 0.00 0.00 0.00 4.00
1248 1257 3.365364 GCTCAGTGTGTCAAATAACAGGC 60.365 47.826 0.00 0.00 0.00 4.85
1249 1258 4.067896 CTCAGTGTGTCAAATAACAGGCT 58.932 43.478 0.00 0.00 0.00 4.58
1250 1259 5.222079 TCAGTGTGTCAAATAACAGGCTA 57.778 39.130 0.00 0.00 0.00 3.93
1251 1260 5.616270 TCAGTGTGTCAAATAACAGGCTAA 58.384 37.500 0.00 0.00 0.00 3.09
1252 1261 6.058833 TCAGTGTGTCAAATAACAGGCTAAA 58.941 36.000 0.00 0.00 0.00 1.85
1253 1262 6.544197 TCAGTGTGTCAAATAACAGGCTAAAA 59.456 34.615 0.00 0.00 0.00 1.52
1254 1263 6.857964 CAGTGTGTCAAATAACAGGCTAAAAG 59.142 38.462 0.00 0.00 0.00 2.27
1255 1264 6.546034 AGTGTGTCAAATAACAGGCTAAAAGT 59.454 34.615 0.00 0.00 0.00 2.66
1256 1265 7.717875 AGTGTGTCAAATAACAGGCTAAAAGTA 59.282 33.333 0.00 0.00 0.00 2.24
1257 1266 8.512138 GTGTGTCAAATAACAGGCTAAAAGTAT 58.488 33.333 0.00 0.00 0.00 2.12
1258 1267 8.511321 TGTGTCAAATAACAGGCTAAAAGTATG 58.489 33.333 0.00 0.00 0.00 2.39
1259 1268 7.484959 GTGTCAAATAACAGGCTAAAAGTATGC 59.515 37.037 0.00 0.00 0.00 3.14
1260 1269 7.175816 TGTCAAATAACAGGCTAAAAGTATGCA 59.824 33.333 0.00 0.00 0.00 3.96
1261 1270 7.698130 GTCAAATAACAGGCTAAAAGTATGCAG 59.302 37.037 0.00 0.00 0.00 4.41
1262 1271 5.757850 ATAACAGGCTAAAAGTATGCAGC 57.242 39.130 0.00 0.00 0.00 5.25
1265 1274 1.762708 GGCTAAAAGTATGCAGCCCA 58.237 50.000 0.00 0.00 46.47 5.36
1266 1275 1.405463 GGCTAAAAGTATGCAGCCCAC 59.595 52.381 0.00 0.00 46.47 4.61
1267 1276 1.405463 GCTAAAAGTATGCAGCCCACC 59.595 52.381 0.00 0.00 0.00 4.61
1268 1277 1.670811 CTAAAAGTATGCAGCCCACCG 59.329 52.381 0.00 0.00 0.00 4.94
1269 1278 0.251165 AAAAGTATGCAGCCCACCGT 60.251 50.000 0.00 0.00 0.00 4.83
1270 1279 0.960364 AAAGTATGCAGCCCACCGTG 60.960 55.000 0.00 0.00 0.00 4.94
1271 1280 3.508840 GTATGCAGCCCACCGTGC 61.509 66.667 0.00 0.00 40.29 5.34
1272 1281 3.716195 TATGCAGCCCACCGTGCT 61.716 61.111 0.00 0.00 40.54 4.40
1273 1282 2.363172 TATGCAGCCCACCGTGCTA 61.363 57.895 0.00 0.00 40.54 3.49
1274 1283 1.904990 TATGCAGCCCACCGTGCTAA 61.905 55.000 0.00 0.00 40.54 3.09
1275 1284 2.671619 GCAGCCCACCGTGCTAAA 60.672 61.111 0.00 0.00 36.81 1.85
1276 1285 2.978018 GCAGCCCACCGTGCTAAAC 61.978 63.158 0.00 0.00 36.81 2.01
1285 1294 4.074647 GTGCTAAACGGGCCAAGT 57.925 55.556 4.39 0.00 0.00 3.16
1286 1295 2.337361 GTGCTAAACGGGCCAAGTT 58.663 52.632 4.39 7.66 0.00 2.66
1287 1296 0.240145 GTGCTAAACGGGCCAAGTTC 59.760 55.000 14.95 5.25 0.00 3.01
1288 1297 0.891904 TGCTAAACGGGCCAAGTTCC 60.892 55.000 14.95 8.36 0.00 3.62
1296 1305 2.679996 GCCAAGTTCCGGCCCATT 60.680 61.111 0.00 0.00 44.22 3.16
1297 1306 2.282783 GCCAAGTTCCGGCCCATTT 61.283 57.895 0.00 0.00 44.22 2.32
1298 1307 0.968393 GCCAAGTTCCGGCCCATTTA 60.968 55.000 0.00 0.00 44.22 1.40
1299 1308 0.815095 CCAAGTTCCGGCCCATTTAC 59.185 55.000 0.00 0.00 0.00 2.01
1300 1309 1.615919 CCAAGTTCCGGCCCATTTACT 60.616 52.381 0.00 0.00 0.00 2.24
1301 1310 2.356330 CCAAGTTCCGGCCCATTTACTA 60.356 50.000 0.00 0.00 0.00 1.82
1302 1311 3.349022 CAAGTTCCGGCCCATTTACTAA 58.651 45.455 0.00 0.00 0.00 2.24
1303 1312 2.995283 AGTTCCGGCCCATTTACTAAC 58.005 47.619 0.00 0.00 0.00 2.34
1304 1313 2.574824 AGTTCCGGCCCATTTACTAACT 59.425 45.455 0.00 0.00 0.00 2.24
1305 1314 2.681344 GTTCCGGCCCATTTACTAACTG 59.319 50.000 0.00 0.00 0.00 3.16
1306 1315 1.210967 TCCGGCCCATTTACTAACTGG 59.789 52.381 0.00 0.00 0.00 4.00
1307 1316 1.210967 CCGGCCCATTTACTAACTGGA 59.789 52.381 6.74 0.00 31.38 3.86
1308 1317 2.285977 CGGCCCATTTACTAACTGGAC 58.714 52.381 6.74 0.00 31.38 4.02
1309 1318 2.651455 GGCCCATTTACTAACTGGACC 58.349 52.381 6.74 1.49 31.38 4.46
1310 1319 2.285977 GCCCATTTACTAACTGGACCG 58.714 52.381 6.74 0.00 31.38 4.79
1311 1320 2.355412 GCCCATTTACTAACTGGACCGT 60.355 50.000 6.74 0.00 31.38 4.83
1312 1321 3.267483 CCCATTTACTAACTGGACCGTG 58.733 50.000 6.74 0.00 31.38 4.94
1313 1322 2.676342 CCATTTACTAACTGGACCGTGC 59.324 50.000 0.00 0.00 31.38 5.34
1314 1323 2.460757 TTTACTAACTGGACCGTGCC 57.539 50.000 0.00 0.00 0.00 5.01
1315 1324 1.636148 TTACTAACTGGACCGTGCCT 58.364 50.000 0.00 0.00 0.00 4.75
1316 1325 0.892755 TACTAACTGGACCGTGCCTG 59.107 55.000 0.00 0.00 0.00 4.85
1317 1326 1.079127 CTAACTGGACCGTGCCTGG 60.079 63.158 0.00 0.00 0.00 4.45
1318 1327 2.521958 CTAACTGGACCGTGCCTGGG 62.522 65.000 0.00 0.00 0.00 4.45
1359 1368 3.762247 GGCACAGTACGGCCCGTA 61.762 66.667 12.92 12.92 44.53 4.02
1360 1369 2.497770 GCACAGTACGGCCCGTAT 59.502 61.111 20.41 5.86 44.12 3.06
1361 1370 1.735360 GCACAGTACGGCCCGTATA 59.265 57.895 20.41 0.00 44.12 1.47
1362 1371 0.102844 GCACAGTACGGCCCGTATAA 59.897 55.000 20.41 0.00 44.12 0.98
1363 1372 1.269936 GCACAGTACGGCCCGTATAAT 60.270 52.381 20.41 6.04 44.12 1.28
1364 1373 2.030007 GCACAGTACGGCCCGTATAATA 60.030 50.000 20.41 0.00 44.12 0.98
1365 1374 3.552684 GCACAGTACGGCCCGTATAATAA 60.553 47.826 20.41 0.00 44.12 1.40
1366 1375 4.813027 CACAGTACGGCCCGTATAATAAT 58.187 43.478 20.41 0.00 44.12 1.28
1367 1376 4.860907 CACAGTACGGCCCGTATAATAATC 59.139 45.833 20.41 4.44 44.12 1.75
1368 1377 4.100529 CAGTACGGCCCGTATAATAATCG 58.899 47.826 20.41 0.00 44.12 3.34
1369 1378 3.758554 AGTACGGCCCGTATAATAATCGT 59.241 43.478 20.41 0.00 44.12 3.73
1370 1379 2.950433 ACGGCCCGTATAATAATCGTG 58.050 47.619 7.20 0.00 38.73 4.35
1371 1380 1.657094 CGGCCCGTATAATAATCGTGC 59.343 52.381 0.00 0.00 0.00 5.34
1372 1381 2.004733 GGCCCGTATAATAATCGTGCC 58.995 52.381 0.00 0.00 40.23 5.01
1373 1382 2.354403 GGCCCGTATAATAATCGTGCCT 60.354 50.000 0.00 0.00 42.74 4.75
1374 1383 3.332034 GCCCGTATAATAATCGTGCCTT 58.668 45.455 0.00 0.00 0.00 4.35
1375 1384 3.124636 GCCCGTATAATAATCGTGCCTTG 59.875 47.826 0.00 0.00 0.00 3.61
1376 1385 3.682858 CCCGTATAATAATCGTGCCTTGG 59.317 47.826 0.00 0.00 0.00 3.61
1377 1386 3.124636 CCGTATAATAATCGTGCCTTGGC 59.875 47.826 4.43 4.43 0.00 4.52
1378 1387 3.181534 CGTATAATAATCGTGCCTTGGCG 60.182 47.826 7.18 0.00 0.00 5.69
1379 1388 1.588674 TAATAATCGTGCCTTGGCGG 58.411 50.000 7.18 1.84 0.00 6.13
1380 1389 1.101049 AATAATCGTGCCTTGGCGGG 61.101 55.000 7.18 1.48 0.00 6.13
1406 1415 3.720494 TGCCAGGCACGATTAGGA 58.280 55.556 11.22 0.00 31.71 2.94
1407 1416 2.220953 TGCCAGGCACGATTAGGAT 58.779 52.632 11.22 0.00 31.71 3.24
1408 1417 0.179048 TGCCAGGCACGATTAGGATG 60.179 55.000 11.22 0.00 31.71 3.51
1409 1418 0.886490 GCCAGGCACGATTAGGATGG 60.886 60.000 6.55 0.00 0.00 3.51
1410 1419 0.250467 CCAGGCACGATTAGGATGGG 60.250 60.000 0.00 0.00 0.00 4.00
1411 1420 0.886490 CAGGCACGATTAGGATGGGC 60.886 60.000 0.00 0.00 0.00 5.36
1412 1421 1.600916 GGCACGATTAGGATGGGCC 60.601 63.158 0.00 0.00 0.00 5.80
1413 1422 1.961277 GCACGATTAGGATGGGCCG 60.961 63.158 0.00 0.00 43.43 6.13
1414 1423 1.445942 CACGATTAGGATGGGCCGT 59.554 57.895 0.00 0.00 43.43 5.68
1415 1424 0.880278 CACGATTAGGATGGGCCGTG 60.880 60.000 1.02 0.00 43.43 4.94
1416 1425 1.961277 CGATTAGGATGGGCCGTGC 60.961 63.158 9.57 9.57 43.43 5.34
1649 1658 2.048503 GCGCCAGTTCACGGTACT 60.049 61.111 0.00 0.00 0.00 2.73
1652 1661 1.669440 GCCAGTTCACGGTACTCCA 59.331 57.895 0.00 0.00 0.00 3.86
1653 1662 0.249398 GCCAGTTCACGGTACTCCAT 59.751 55.000 0.00 0.00 0.00 3.41
2068 2078 2.290641 TGAAGCACGGTTGGGTGATAAT 60.291 45.455 0.00 0.00 40.38 1.28
2085 2095 6.404293 GGTGATAATTCGTGTAAACAGCCATT 60.404 38.462 0.00 0.00 0.00 3.16
2109 2119 7.412137 TTGAGTATTTGTGCTCATATCATCG 57.588 36.000 0.00 0.00 40.83 3.84
2141 2160 7.703197 GTGTTTTGTTAGGCAGCTTAGTTTTTA 59.297 33.333 0.00 0.00 0.00 1.52
2213 2232 2.502947 TCTCATTGCCTATGTGTCTGCT 59.497 45.455 0.00 0.00 35.64 4.24
2242 2261 5.268387 TCTCAGAGATCTAAGCAAGTCCTT 58.732 41.667 0.00 0.00 0.00 3.36
2245 2264 7.397476 TCTCAGAGATCTAAGCAAGTCCTTAAA 59.603 37.037 0.00 0.00 0.00 1.52
2284 2303 0.169672 GACAATGCGCTGTGCTGAAT 59.830 50.000 14.92 0.00 46.63 2.57
2350 2369 5.488341 TCCACTTTTTACAGCTACTCCATC 58.512 41.667 0.00 0.00 0.00 3.51
2460 2479 7.672983 TTATTTGCTGTCTTAGACTTGAAGG 57.327 36.000 13.86 0.00 33.15 3.46
2600 2619 0.535780 CTCTGGAGCAAGGCACAACA 60.536 55.000 0.00 0.00 0.00 3.33
2615 2635 1.474879 ACAACAACCAACCCACTTTCG 59.525 47.619 0.00 0.00 0.00 3.46
2766 2786 3.791973 AACATTTTCCGTGCTGTCAAA 57.208 38.095 0.00 0.00 0.00 2.69
2778 2798 4.316861 CGTGCTGTCAAACGTATATTACCG 60.317 45.833 0.00 0.00 35.13 4.02
2838 2859 7.504238 ACCACCATCTTTACTTCACAAATAACA 59.496 33.333 0.00 0.00 0.00 2.41
2839 2860 8.522830 CCACCATCTTTACTTCACAAATAACAT 58.477 33.333 0.00 0.00 0.00 2.71
2928 2949 3.643320 TCAAGCATGGGTCATCTACTAGG 59.357 47.826 0.00 0.00 0.00 3.02
2931 2952 5.017093 AGCATGGGTCATCTACTAGGTAT 57.983 43.478 0.00 0.00 0.00 2.73
2934 2955 3.154710 TGGGTCATCTACTAGGTATGCG 58.845 50.000 0.00 0.00 0.00 4.73
3089 3110 4.816385 TCTTGCTTCTGGTGTGTCTTTTAG 59.184 41.667 0.00 0.00 0.00 1.85
3095 3116 6.238759 GCTTCTGGTGTGTCTTTTAGTCATTT 60.239 38.462 0.00 0.00 0.00 2.32
3167 3203 4.407621 TCTCTGTTTTGGTCTTCCTACACA 59.592 41.667 0.00 0.00 30.99 3.72
3442 3480 5.798910 CAAAATTTTGCACTGGTCTGTTTC 58.201 37.500 17.48 0.00 0.00 2.78
3456 3494 4.525100 GGTCTGTTTCCTTCTCTAGAGTGT 59.475 45.833 19.21 0.00 0.00 3.55
3569 3628 1.562672 GCTCAGGCCTAGGGGTGAAA 61.563 60.000 3.98 0.00 34.45 2.69
3578 3637 3.839778 CCTAGGGGTGAAACAAAAAGGA 58.160 45.455 0.00 0.00 39.98 3.36
3582 3641 5.801531 AGGGGTGAAACAAAAAGGAATAC 57.198 39.130 0.00 0.00 39.98 1.89
3620 3679 4.202264 TGGACAGAGGACTCTTTCAGTTTC 60.202 45.833 15.16 1.36 37.96 2.78
3724 3783 6.627395 CCATCAAGTGGTTAGTTACACAAA 57.373 37.500 0.00 0.00 43.44 2.83
3850 3976 2.457366 AGCTGCTTTTACGTGTAGCT 57.543 45.000 9.84 9.84 44.95 3.32
4120 4249 8.035394 GTCTATGAATATATTCCGGTGTGTCAT 58.965 37.037 20.29 8.91 35.97 3.06
4121 4250 9.250246 TCTATGAATATATTCCGGTGTGTCATA 57.750 33.333 20.29 9.48 35.97 2.15
4137 4266 3.130516 TGTCATAGCGTAGTCCTGGAAAG 59.869 47.826 0.00 0.00 0.00 2.62
4525 4657 8.553459 ACTTTGTATATCAGTTCAAGACCTTG 57.447 34.615 3.47 3.47 41.71 3.61
4536 4668 3.146066 TCAAGACCTTGCGTTAAATGCT 58.854 40.909 4.94 0.00 40.24 3.79
4551 4683 6.128661 CGTTAAATGCTTTGCACTAGTCACTA 60.129 38.462 0.00 0.00 43.04 2.74
4632 4765 0.531090 TTGTATGTACCCCGCATCGC 60.531 55.000 0.00 0.00 0.00 4.58
4699 4832 5.049474 TCAAACATCATGACAGTACAAGCAC 60.049 40.000 0.00 0.00 0.00 4.40
4727 4860 1.736645 CCGAAGACGTGACGCCATT 60.737 57.895 4.25 0.00 37.88 3.16
4762 4895 5.067805 CCTTACTGGAGCTGAACAAACTTTT 59.932 40.000 0.00 0.00 38.35 2.27
4799 4955 9.108284 CATTCCAAAGAAGTAAAACACCAAAAT 57.892 29.630 0.00 0.00 34.86 1.82
4808 4964 5.749588 AGTAAAACACCAAAATAACAACCGC 59.250 36.000 0.00 0.00 0.00 5.68
4811 4967 0.038983 ACCAAAATAACAACCGCCGC 60.039 50.000 0.00 0.00 0.00 6.53
4812 4968 0.242555 CCAAAATAACAACCGCCGCT 59.757 50.000 0.00 0.00 0.00 5.52
4813 4969 1.335935 CAAAATAACAACCGCCGCTG 58.664 50.000 0.00 0.00 0.00 5.18
4814 4970 1.068885 CAAAATAACAACCGCCGCTGA 60.069 47.619 0.00 0.00 0.00 4.26
4815 4971 0.519961 AAATAACAACCGCCGCTGAC 59.480 50.000 0.00 0.00 0.00 3.51
4816 4972 1.632046 AATAACAACCGCCGCTGACG 61.632 55.000 0.00 0.00 39.67 4.35
4817 4973 2.495366 ATAACAACCGCCGCTGACGA 62.495 55.000 0.00 0.00 43.93 4.20
4818 4974 2.696409 TAACAACCGCCGCTGACGAA 62.696 55.000 0.00 0.00 43.93 3.85
4819 4975 3.777925 CAACCGCCGCTGACGAAG 61.778 66.667 0.00 0.00 43.93 3.79
4834 4990 3.882888 TGACGAAGCCAACAAAGAGAAAT 59.117 39.130 0.00 0.00 0.00 2.17
4860 5016 7.721842 TGTAACTCAAAAGGATCCAACATGTAA 59.278 33.333 15.82 0.00 0.00 2.41
4938 5094 7.984050 AGAACACATGAGTAAGATTCCATACAG 59.016 37.037 0.00 0.00 0.00 2.74
4950 5106 4.433186 TTCCATACAGATTTGCGTTTGG 57.567 40.909 0.00 0.00 36.06 3.28
5050 5211 9.495572 TTTTTCAAAAACCCACCATCATTATAC 57.504 29.630 0.00 0.00 0.00 1.47
5051 5212 8.429237 TTTCAAAAACCCACCATCATTATACT 57.571 30.769 0.00 0.00 0.00 2.12
5053 5214 7.178573 TCAAAAACCCACCATCATTATACTGA 58.821 34.615 0.00 0.00 0.00 3.41
5054 5215 7.122055 TCAAAAACCCACCATCATTATACTGAC 59.878 37.037 0.00 0.00 0.00 3.51
5055 5216 5.708736 AACCCACCATCATTATACTGACA 57.291 39.130 0.00 0.00 0.00 3.58
5056 5217 5.296151 ACCCACCATCATTATACTGACAG 57.704 43.478 0.00 0.00 0.00 3.51
5057 5218 4.721776 ACCCACCATCATTATACTGACAGT 59.278 41.667 13.68 13.68 0.00 3.55
5058 5219 5.191722 ACCCACCATCATTATACTGACAGTT 59.808 40.000 14.50 4.59 0.00 3.16
5060 5221 6.038603 CCCACCATCATTATACTGACAGTTTG 59.961 42.308 14.50 7.22 0.00 2.93
5061 5222 6.823182 CCACCATCATTATACTGACAGTTTGA 59.177 38.462 14.50 12.04 0.00 2.69
5088 5249 3.935203 ACATTGATTGCTCCACTAGAACG 59.065 43.478 0.00 0.00 0.00 3.95
5109 5270 4.219143 GGTTTAAGTGAAAACCGGACTG 57.781 45.455 9.46 0.00 46.51 3.51
5132 5293 1.217244 GTACCGATGGCAAGTCCGT 59.783 57.895 0.00 0.00 37.80 4.69
5138 5299 4.182433 TGGCAAGTCCGTGTGGCA 62.182 61.111 0.00 0.00 46.84 4.92
5142 5303 1.367471 CAAGTCCGTGTGGCAGAGA 59.633 57.895 0.00 0.00 34.14 3.10
5156 5317 1.827681 CAGAGAAGAGACGGGAGACA 58.172 55.000 0.00 0.00 0.00 3.41
5165 5326 0.179169 GACGGGAGACAACGCTACTC 60.179 60.000 0.00 0.00 0.00 2.59
5187 5348 2.810488 TAACCCCGTCTCCCCCTGAC 62.810 65.000 0.00 0.00 0.00 3.51
5203 5364 2.213499 CTGACTTTTCTCCACAAGCGT 58.787 47.619 0.00 0.00 0.00 5.07
5244 5405 7.034967 TGTGGTTAACCCCTTCTATTAACAT 57.965 36.000 21.97 0.00 39.50 2.71
5269 5430 6.759497 AATGATAGCCAGTTCTTTAACCAC 57.241 37.500 0.00 0.00 36.15 4.16
5270 5431 5.499004 TGATAGCCAGTTCTTTAACCACT 57.501 39.130 0.00 0.00 36.15 4.00
5271 5432 6.614694 TGATAGCCAGTTCTTTAACCACTA 57.385 37.500 0.00 0.00 36.15 2.74
5272 5433 6.640518 TGATAGCCAGTTCTTTAACCACTAG 58.359 40.000 0.00 0.00 36.15 2.57
5273 5434 4.287766 AGCCAGTTCTTTAACCACTAGG 57.712 45.455 0.00 0.00 42.21 3.02
5274 5435 3.009143 AGCCAGTTCTTTAACCACTAGGG 59.991 47.826 0.00 0.00 44.81 3.53
5275 5436 3.008704 GCCAGTTCTTTAACCACTAGGGA 59.991 47.826 0.00 0.00 41.15 4.20
5276 5437 4.324331 GCCAGTTCTTTAACCACTAGGGAT 60.324 45.833 0.00 0.00 41.15 3.85
5277 5438 5.429130 CCAGTTCTTTAACCACTAGGGATC 58.571 45.833 0.00 0.00 41.15 3.36
5278 5439 5.109903 CAGTTCTTTAACCACTAGGGATCG 58.890 45.833 0.00 0.00 41.15 3.69
5279 5440 3.814005 TCTTTAACCACTAGGGATCGC 57.186 47.619 0.54 0.54 41.15 4.58
5280 5441 2.100252 TCTTTAACCACTAGGGATCGCG 59.900 50.000 0.00 0.00 41.15 5.87
5281 5442 0.748450 TTAACCACTAGGGATCGCGG 59.252 55.000 6.13 2.10 41.15 6.46
5282 5443 1.741327 TAACCACTAGGGATCGCGGC 61.741 60.000 6.13 0.00 41.15 6.53
5283 5444 4.647615 CCACTAGGGATCGCGGCG 62.648 72.222 17.70 17.70 40.01 6.46
5284 5445 4.647615 CACTAGGGATCGCGGCGG 62.648 72.222 23.46 6.78 0.00 6.13
5309 5470 4.948257 GGCACGGGTTAGGGTTAG 57.052 61.111 0.00 0.00 0.00 2.34
5310 5471 1.222661 GGCACGGGTTAGGGTTAGG 59.777 63.158 0.00 0.00 0.00 2.69
5311 5472 1.266867 GGCACGGGTTAGGGTTAGGA 61.267 60.000 0.00 0.00 0.00 2.94
5312 5473 0.835276 GCACGGGTTAGGGTTAGGAT 59.165 55.000 0.00 0.00 0.00 3.24
5313 5474 1.202615 GCACGGGTTAGGGTTAGGATC 60.203 57.143 0.00 0.00 0.00 3.36
5314 5475 1.068127 CACGGGTTAGGGTTAGGATCG 59.932 57.143 0.00 0.00 0.00 3.69
5315 5476 1.342374 ACGGGTTAGGGTTAGGATCGT 60.342 52.381 0.00 0.00 0.00 3.73
5316 5477 2.091885 ACGGGTTAGGGTTAGGATCGTA 60.092 50.000 0.00 0.00 0.00 3.43
5317 5478 2.555757 CGGGTTAGGGTTAGGATCGTAG 59.444 54.545 0.00 0.00 0.00 3.51
5318 5479 2.896044 GGGTTAGGGTTAGGATCGTAGG 59.104 54.545 0.00 0.00 0.00 3.18
5319 5480 3.570540 GGTTAGGGTTAGGATCGTAGGT 58.429 50.000 0.00 0.00 0.00 3.08
5320 5481 4.447762 GGGTTAGGGTTAGGATCGTAGGTA 60.448 50.000 0.00 0.00 0.00 3.08
5321 5482 5.328565 GGTTAGGGTTAGGATCGTAGGTAT 58.671 45.833 0.00 0.00 0.00 2.73
5322 5483 5.184671 GGTTAGGGTTAGGATCGTAGGTATG 59.815 48.000 0.00 0.00 0.00 2.39
5323 5484 4.736611 AGGGTTAGGATCGTAGGTATGA 57.263 45.455 0.00 0.00 0.00 2.15
5324 5485 5.272405 AGGGTTAGGATCGTAGGTATGAT 57.728 43.478 0.00 0.00 34.78 2.45
5325 5486 6.398655 AGGGTTAGGATCGTAGGTATGATA 57.601 41.667 0.00 0.00 32.36 2.15
5326 5487 6.186234 AGGGTTAGGATCGTAGGTATGATAC 58.814 44.000 0.00 0.00 33.58 2.24
5353 5514 6.720012 GTTGGAAACGATTATTTTGGCAAT 57.280 33.333 0.00 0.00 36.92 3.56
5354 5515 6.533185 GTTGGAAACGATTATTTTGGCAATG 58.467 36.000 0.00 0.00 36.92 2.82
5355 5516 4.629200 TGGAAACGATTATTTTGGCAATGC 59.371 37.500 0.00 0.00 0.00 3.56
5356 5517 4.869861 GGAAACGATTATTTTGGCAATGCT 59.130 37.500 4.82 0.00 0.00 3.79
5357 5518 5.351189 GGAAACGATTATTTTGGCAATGCTT 59.649 36.000 4.82 0.00 0.00 3.91
5358 5519 6.407475 AAACGATTATTTTGGCAATGCTTC 57.593 33.333 4.82 0.00 0.00 3.86
5359 5520 5.070770 ACGATTATTTTGGCAATGCTTCA 57.929 34.783 4.82 0.00 0.00 3.02
5360 5521 4.864247 ACGATTATTTTGGCAATGCTTCAC 59.136 37.500 4.82 0.00 0.00 3.18
5361 5522 4.027458 CGATTATTTTGGCAATGCTTCACG 60.027 41.667 4.82 0.00 0.00 4.35
5362 5523 4.511617 TTATTTTGGCAATGCTTCACGA 57.488 36.364 4.82 0.00 0.00 4.35
5363 5524 3.598019 ATTTTGGCAATGCTTCACGAT 57.402 38.095 4.82 0.00 0.00 3.73
5364 5525 2.350899 TTTGGCAATGCTTCACGATG 57.649 45.000 4.82 0.00 0.00 3.84
5365 5526 1.246649 TTGGCAATGCTTCACGATGT 58.753 45.000 4.82 0.00 0.00 3.06
5366 5527 2.106477 TGGCAATGCTTCACGATGTA 57.894 45.000 4.82 0.00 0.00 2.29
5367 5528 2.642427 TGGCAATGCTTCACGATGTAT 58.358 42.857 4.82 0.00 0.00 2.29
5368 5529 3.016031 TGGCAATGCTTCACGATGTATT 58.984 40.909 4.82 0.00 0.00 1.89
5369 5530 3.181498 TGGCAATGCTTCACGATGTATTG 60.181 43.478 4.82 15.03 39.64 1.90
5370 5531 3.065233 GGCAATGCTTCACGATGTATTGA 59.935 43.478 20.36 0.00 39.29 2.57
5371 5532 4.261322 GGCAATGCTTCACGATGTATTGAT 60.261 41.667 20.36 0.00 39.29 2.57
5372 5533 4.908156 GCAATGCTTCACGATGTATTGATC 59.092 41.667 20.36 6.71 39.29 2.92
5380 5541 3.942539 CGATGTATTGATCGGTGCAAA 57.057 42.857 0.00 0.00 41.29 3.68
5381 5542 3.865329 CGATGTATTGATCGGTGCAAAG 58.135 45.455 0.00 0.00 41.29 2.77
5382 5543 3.621794 GATGTATTGATCGGTGCAAAGC 58.378 45.455 0.00 0.00 0.00 3.51
5383 5544 1.396648 TGTATTGATCGGTGCAAAGCG 59.603 47.619 0.00 0.00 0.00 4.68
5384 5545 0.376852 TATTGATCGGTGCAAAGCGC 59.623 50.000 0.00 0.00 42.89 5.92
5396 5557 3.103793 GCAAAGCGCACGTATATATGG 57.896 47.619 11.47 0.00 41.79 2.74
5397 5558 2.734606 GCAAAGCGCACGTATATATGGA 59.265 45.455 11.47 0.00 41.79 3.41
5398 5559 3.181530 GCAAAGCGCACGTATATATGGAG 60.182 47.826 11.47 0.43 41.79 3.86
5399 5560 3.936372 AAGCGCACGTATATATGGAGT 57.064 42.857 11.47 0.00 0.00 3.85
5400 5561 5.158494 CAAAGCGCACGTATATATGGAGTA 58.842 41.667 11.47 0.00 0.00 2.59
5401 5562 4.352600 AGCGCACGTATATATGGAGTAC 57.647 45.455 11.47 0.00 0.00 2.73
5402 5563 3.754850 AGCGCACGTATATATGGAGTACA 59.245 43.478 11.47 0.00 0.00 2.90
5403 5564 4.216902 AGCGCACGTATATATGGAGTACAA 59.783 41.667 11.47 0.00 0.00 2.41
5404 5565 4.919168 GCGCACGTATATATGGAGTACAAA 59.081 41.667 0.30 0.00 0.00 2.83
5405 5566 5.060569 GCGCACGTATATATGGAGTACAAAG 59.939 44.000 0.30 0.00 0.00 2.77
5406 5567 6.147581 CGCACGTATATATGGAGTACAAAGT 58.852 40.000 6.89 0.00 0.00 2.66
5407 5568 6.087687 CGCACGTATATATGGAGTACAAAGTG 59.912 42.308 6.89 0.00 0.00 3.16
5408 5569 6.365247 GCACGTATATATGGAGTACAAAGTGG 59.635 42.308 6.89 0.00 0.00 4.00
5409 5570 6.866770 CACGTATATATGGAGTACAAAGTGGG 59.133 42.308 6.89 0.00 0.00 4.61
5410 5571 5.867716 CGTATATATGGAGTACAAAGTGGGC 59.132 44.000 0.00 0.00 0.00 5.36
5411 5572 3.577805 ATATGGAGTACAAAGTGGGCC 57.422 47.619 0.00 0.00 0.00 5.80
5412 5573 1.072266 ATGGAGTACAAAGTGGGCCA 58.928 50.000 0.00 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 3.190849 CGCGCACCAGGATGACAG 61.191 66.667 8.75 0.00 39.69 3.51
96 97 3.008813 TCCTCTACTAACTCGACAGTGGT 59.991 47.826 0.00 0.00 31.06 4.16
102 103 2.641305 TGCCTCCTCTACTAACTCGAC 58.359 52.381 0.00 0.00 0.00 4.20
116 117 0.447801 CAACGCATGTAGTTGCCTCC 59.552 55.000 18.32 0.00 41.77 4.30
126 127 1.647545 CGAGGATTGCCAACGCATGT 61.648 55.000 0.00 0.00 46.67 3.21
153 154 0.979665 TGAAGAAGGAGGAGGCACTG 59.020 55.000 0.00 0.00 41.55 3.66
155 156 1.280421 ACATGAAGAAGGAGGAGGCAC 59.720 52.381 0.00 0.00 0.00 5.01
158 159 2.898705 CGAACATGAAGAAGGAGGAGG 58.101 52.381 0.00 0.00 0.00 4.30
159 160 2.275318 GCGAACATGAAGAAGGAGGAG 58.725 52.381 0.00 0.00 0.00 3.69
160 161 1.066143 GGCGAACATGAAGAAGGAGGA 60.066 52.381 0.00 0.00 0.00 3.71
230 231 2.771372 TGGATTCGAATCTCCACCATGA 59.229 45.455 31.32 3.99 36.63 3.07
247 249 0.381801 GCCATCGCGTCAAAATGGAT 59.618 50.000 23.56 0.00 42.13 3.41
385 387 5.986135 AGAGTACACACAACAGATTGAGTTC 59.014 40.000 0.00 0.00 37.51 3.01
398 400 2.161012 GGATCGACGAAGAGTACACACA 59.839 50.000 0.00 0.00 0.00 3.72
445 447 2.389020 CGACAAGGAGCAGCAGCAG 61.389 63.158 3.17 0.00 45.49 4.24
464 466 1.305718 AGGTGGTGCTCTCCTCCTC 60.306 63.158 5.93 0.00 45.00 3.71
494 496 3.986006 TCGACACCCACGAGCCAC 61.986 66.667 0.00 0.00 34.85 5.01
495 497 3.986006 GTCGACACCCACGAGCCA 61.986 66.667 11.55 0.00 40.37 4.75
498 500 3.667282 ACCGTCGACACCCACGAG 61.667 66.667 17.16 0.00 40.37 4.18
499 501 3.968568 CACCGTCGACACCCACGA 61.969 66.667 17.16 0.00 38.32 4.35
500 502 4.274700 ACACCGTCGACACCCACG 62.275 66.667 17.16 0.09 35.72 4.94
588 591 0.170339 GTAACATGGGCAAGTTCGGC 59.830 55.000 0.00 0.00 0.00 5.54
603 606 1.445582 CTCCTCCGCACACCGTAAC 60.446 63.158 0.00 0.00 34.38 2.50
694 697 6.872020 AGGCTGATGAAAATTGAAATTGAGTG 59.128 34.615 0.00 0.00 0.00 3.51
698 701 7.321153 AGAGAGGCTGATGAAAATTGAAATTG 58.679 34.615 0.00 0.00 0.00 2.32
744 747 8.143673 TGTTCCATGAAATCCCATAATGAAAA 57.856 30.769 0.00 0.00 0.00 2.29
827 830 5.809001 ACCATCAGATCAGACTAGCAAAAA 58.191 37.500 0.00 0.00 0.00 1.94
828 831 5.426689 ACCATCAGATCAGACTAGCAAAA 57.573 39.130 0.00 0.00 0.00 2.44
829 832 5.181009 CAACCATCAGATCAGACTAGCAAA 58.819 41.667 0.00 0.00 0.00 3.68
830 833 4.223700 ACAACCATCAGATCAGACTAGCAA 59.776 41.667 0.00 0.00 0.00 3.91
831 834 3.771479 ACAACCATCAGATCAGACTAGCA 59.229 43.478 0.00 0.00 0.00 3.49
832 835 4.142071 TGACAACCATCAGATCAGACTAGC 60.142 45.833 0.00 0.00 0.00 3.42
833 836 5.588958 TGACAACCATCAGATCAGACTAG 57.411 43.478 0.00 0.00 0.00 2.57
834 837 6.358974 TTTGACAACCATCAGATCAGACTA 57.641 37.500 0.00 0.00 0.00 2.59
835 838 4.897509 TTGACAACCATCAGATCAGACT 57.102 40.909 0.00 0.00 0.00 3.24
836 839 5.618640 GCTTTTGACAACCATCAGATCAGAC 60.619 44.000 0.00 0.00 0.00 3.51
837 840 4.456911 GCTTTTGACAACCATCAGATCAGA 59.543 41.667 0.00 0.00 0.00 3.27
838 841 4.458295 AGCTTTTGACAACCATCAGATCAG 59.542 41.667 0.00 0.00 0.00 2.90
839 842 4.401022 AGCTTTTGACAACCATCAGATCA 58.599 39.130 0.00 0.00 0.00 2.92
840 843 5.159209 CAAGCTTTTGACAACCATCAGATC 58.841 41.667 0.00 0.00 0.00 2.75
944 948 0.643820 GCCGTCGACTGTTTATTCCG 59.356 55.000 14.70 0.00 0.00 4.30
994 1003 5.336213 CCATTTGGCTAGCTATAATTGCAGG 60.336 44.000 15.72 5.87 0.00 4.85
995 1004 5.336213 CCCATTTGGCTAGCTATAATTGCAG 60.336 44.000 15.72 5.56 0.00 4.41
996 1005 4.523943 CCCATTTGGCTAGCTATAATTGCA 59.476 41.667 15.72 0.00 0.00 4.08
997 1006 5.064441 CCCATTTGGCTAGCTATAATTGC 57.936 43.478 15.72 0.00 0.00 3.56
1074 1083 4.097863 GTTTAGCCCGTGCCGTGC 62.098 66.667 0.00 0.00 38.69 5.34
1075 1084 3.784412 CGTTTAGCCCGTGCCGTG 61.784 66.667 0.00 0.00 38.69 4.94
1145 1154 3.993376 TAATCGGGTCGTGCCGTGC 62.993 63.158 0.00 0.00 38.44 5.34
1146 1155 2.162754 GTAATCGGGTCGTGCCGTG 61.163 63.158 0.00 0.00 38.44 4.94
1147 1156 2.182537 GTAATCGGGTCGTGCCGT 59.817 61.111 0.00 0.00 38.44 5.68
1148 1157 2.952783 CGTAATCGGGTCGTGCCG 60.953 66.667 0.00 0.00 38.44 5.69
1149 1158 1.015607 AAACGTAATCGGGTCGTGCC 61.016 55.000 0.00 0.00 41.85 5.01
1150 1159 1.627879 TAAACGTAATCGGGTCGTGC 58.372 50.000 0.00 0.00 41.85 5.34
1151 1160 4.845621 AAATAAACGTAATCGGGTCGTG 57.154 40.909 0.00 0.00 41.85 4.35
1152 1161 5.861222 AAAAATAAACGTAATCGGGTCGT 57.139 34.783 0.00 0.00 41.85 4.34
1153 1162 8.825064 AAATAAAAATAAACGTAATCGGGTCG 57.175 30.769 0.00 0.00 41.85 4.79
1192 1201 9.238368 GCCTATTTTTACATGTTGGGCTATATA 57.762 33.333 13.06 0.00 34.86 0.86
1193 1202 7.950124 AGCCTATTTTTACATGTTGGGCTATAT 59.050 33.333 19.44 0.13 44.44 0.86
1194 1203 7.294584 AGCCTATTTTTACATGTTGGGCTATA 58.705 34.615 19.44 4.43 44.44 1.31
1195 1204 6.136155 AGCCTATTTTTACATGTTGGGCTAT 58.864 36.000 19.44 1.09 44.44 2.97
1196 1205 5.515106 AGCCTATTTTTACATGTTGGGCTA 58.485 37.500 19.44 0.94 44.44 3.93
1197 1206 4.352893 AGCCTATTTTTACATGTTGGGCT 58.647 39.130 16.25 16.25 41.97 5.19
1198 1207 4.736126 AGCCTATTTTTACATGTTGGGC 57.264 40.909 12.57 12.57 37.57 5.36
1199 1208 8.931775 GTTTTTAGCCTATTTTTACATGTTGGG 58.068 33.333 2.30 0.00 0.00 4.12
1200 1209 8.643752 CGTTTTTAGCCTATTTTTACATGTTGG 58.356 33.333 2.30 0.00 0.00 3.77
1201 1210 8.159709 GCGTTTTTAGCCTATTTTTACATGTTG 58.840 33.333 2.30 0.00 0.00 3.33
1202 1211 8.085909 AGCGTTTTTAGCCTATTTTTACATGTT 58.914 29.630 2.30 0.00 34.64 2.71
1203 1212 7.599171 AGCGTTTTTAGCCTATTTTTACATGT 58.401 30.769 2.69 2.69 34.64 3.21
1204 1213 7.753132 TGAGCGTTTTTAGCCTATTTTTACATG 59.247 33.333 0.00 0.00 34.64 3.21
1205 1214 7.822658 TGAGCGTTTTTAGCCTATTTTTACAT 58.177 30.769 0.00 0.00 34.64 2.29
1206 1215 7.040961 ACTGAGCGTTTTTAGCCTATTTTTACA 60.041 33.333 0.00 0.00 34.64 2.41
1207 1216 7.270579 CACTGAGCGTTTTTAGCCTATTTTTAC 59.729 37.037 0.00 0.00 34.64 2.01
1208 1217 7.040961 ACACTGAGCGTTTTTAGCCTATTTTTA 60.041 33.333 0.00 0.00 34.64 1.52
1209 1218 6.149633 CACTGAGCGTTTTTAGCCTATTTTT 58.850 36.000 0.00 0.00 34.64 1.94
1210 1219 5.240844 ACACTGAGCGTTTTTAGCCTATTTT 59.759 36.000 0.00 0.00 34.64 1.82
1211 1220 4.760204 ACACTGAGCGTTTTTAGCCTATTT 59.240 37.500 0.00 0.00 34.64 1.40
1212 1221 4.154195 CACACTGAGCGTTTTTAGCCTATT 59.846 41.667 0.00 0.00 34.64 1.73
1213 1222 3.684788 CACACTGAGCGTTTTTAGCCTAT 59.315 43.478 0.00 0.00 34.64 2.57
1214 1223 3.064207 CACACTGAGCGTTTTTAGCCTA 58.936 45.455 0.00 0.00 34.64 3.93
1215 1224 1.873591 CACACTGAGCGTTTTTAGCCT 59.126 47.619 0.00 0.00 34.64 4.58
1216 1225 1.602377 ACACACTGAGCGTTTTTAGCC 59.398 47.619 0.00 0.00 34.64 3.93
1217 1226 2.286833 TGACACACTGAGCGTTTTTAGC 59.713 45.455 0.00 0.00 0.00 3.09
1218 1227 4.530094 TTGACACACTGAGCGTTTTTAG 57.470 40.909 0.00 0.00 0.00 1.85
1219 1228 4.948608 TTTGACACACTGAGCGTTTTTA 57.051 36.364 0.00 0.00 0.00 1.52
1220 1229 3.840890 TTTGACACACTGAGCGTTTTT 57.159 38.095 0.00 0.00 0.00 1.94
1221 1230 5.163703 TGTTATTTGACACACTGAGCGTTTT 60.164 36.000 0.00 0.00 0.00 2.43
1222 1231 4.334203 TGTTATTTGACACACTGAGCGTTT 59.666 37.500 0.00 0.00 0.00 3.60
1223 1232 3.874543 TGTTATTTGACACACTGAGCGTT 59.125 39.130 0.00 0.00 0.00 4.84
1224 1233 3.462982 TGTTATTTGACACACTGAGCGT 58.537 40.909 0.00 0.00 0.00 5.07
1225 1234 3.120546 CCTGTTATTTGACACACTGAGCG 60.121 47.826 0.00 0.00 0.00 5.03
1226 1235 3.365364 GCCTGTTATTTGACACACTGAGC 60.365 47.826 0.00 0.00 0.00 4.26
1227 1236 4.067896 AGCCTGTTATTTGACACACTGAG 58.932 43.478 0.00 0.00 0.00 3.35
1228 1237 4.085357 AGCCTGTTATTTGACACACTGA 57.915 40.909 0.00 0.00 0.00 3.41
1229 1238 5.940192 TTAGCCTGTTATTTGACACACTG 57.060 39.130 0.00 0.00 0.00 3.66
1230 1239 6.546034 ACTTTTAGCCTGTTATTTGACACACT 59.454 34.615 0.00 0.00 0.00 3.55
1231 1240 6.735130 ACTTTTAGCCTGTTATTTGACACAC 58.265 36.000 0.00 0.00 0.00 3.82
1232 1241 6.952773 ACTTTTAGCCTGTTATTTGACACA 57.047 33.333 0.00 0.00 0.00 3.72
1233 1242 7.484959 GCATACTTTTAGCCTGTTATTTGACAC 59.515 37.037 0.00 0.00 0.00 3.67
1234 1243 7.175816 TGCATACTTTTAGCCTGTTATTTGACA 59.824 33.333 0.00 0.00 0.00 3.58
1235 1244 7.535139 TGCATACTTTTAGCCTGTTATTTGAC 58.465 34.615 0.00 0.00 0.00 3.18
1236 1245 7.628366 GCTGCATACTTTTAGCCTGTTATTTGA 60.628 37.037 0.00 0.00 0.00 2.69
1237 1246 6.473455 GCTGCATACTTTTAGCCTGTTATTTG 59.527 38.462 0.00 0.00 0.00 2.32
1238 1247 6.564328 GCTGCATACTTTTAGCCTGTTATTT 58.436 36.000 0.00 0.00 0.00 1.40
1239 1248 6.136541 GCTGCATACTTTTAGCCTGTTATT 57.863 37.500 0.00 0.00 0.00 1.40
1240 1249 5.757850 GCTGCATACTTTTAGCCTGTTAT 57.242 39.130 0.00 0.00 0.00 1.89
1247 1256 1.405463 GGTGGGCTGCATACTTTTAGC 59.595 52.381 0.50 0.00 35.49 3.09
1248 1257 1.670811 CGGTGGGCTGCATACTTTTAG 59.329 52.381 0.50 0.00 0.00 1.85
1249 1258 1.003812 ACGGTGGGCTGCATACTTTTA 59.996 47.619 0.50 0.00 0.00 1.52
1250 1259 0.251165 ACGGTGGGCTGCATACTTTT 60.251 50.000 0.50 0.00 0.00 2.27
1251 1260 0.960364 CACGGTGGGCTGCATACTTT 60.960 55.000 0.50 0.00 0.00 2.66
1252 1261 1.377202 CACGGTGGGCTGCATACTT 60.377 57.895 0.50 0.00 0.00 2.24
1253 1262 2.268920 CACGGTGGGCTGCATACT 59.731 61.111 0.50 0.00 0.00 2.12
1254 1263 2.587322 TAGCACGGTGGGCTGCATAC 62.587 60.000 10.60 0.00 42.62 2.39
1255 1264 1.904990 TTAGCACGGTGGGCTGCATA 61.905 55.000 10.60 0.00 42.62 3.14
1256 1265 2.762969 TTTAGCACGGTGGGCTGCAT 62.763 55.000 10.60 0.00 42.62 3.96
1257 1266 3.483788 TTTAGCACGGTGGGCTGCA 62.484 57.895 10.60 0.00 42.62 4.41
1258 1267 2.671619 TTTAGCACGGTGGGCTGC 60.672 61.111 10.60 0.00 42.62 5.25
1259 1268 2.677003 CGTTTAGCACGGTGGGCTG 61.677 63.158 10.60 0.00 45.89 4.85
1260 1269 2.358247 CGTTTAGCACGGTGGGCT 60.358 61.111 10.60 4.18 45.89 5.19
1268 1277 0.240145 GAACTTGGCCCGTTTAGCAC 59.760 55.000 0.00 0.00 0.00 4.40
1269 1278 0.891904 GGAACTTGGCCCGTTTAGCA 60.892 55.000 0.00 0.00 0.00 3.49
1270 1279 1.880894 GGAACTTGGCCCGTTTAGC 59.119 57.895 0.00 0.00 0.00 3.09
1271 1280 1.303091 CCGGAACTTGGCCCGTTTAG 61.303 60.000 0.00 2.35 43.93 1.85
1272 1281 1.302671 CCGGAACTTGGCCCGTTTA 60.303 57.895 0.00 0.00 43.93 2.01
1273 1282 2.596338 CCGGAACTTGGCCCGTTT 60.596 61.111 0.00 0.00 43.93 3.60
1280 1289 0.815095 GTAAATGGGCCGGAACTTGG 59.185 55.000 5.05 0.00 0.00 3.61
1281 1290 1.834188 AGTAAATGGGCCGGAACTTG 58.166 50.000 5.05 0.00 0.00 3.16
1282 1291 3.009805 AGTTAGTAAATGGGCCGGAACTT 59.990 43.478 5.05 0.00 0.00 2.66
1283 1292 2.574824 AGTTAGTAAATGGGCCGGAACT 59.425 45.455 5.05 0.00 0.00 3.01
1284 1293 2.681344 CAGTTAGTAAATGGGCCGGAAC 59.319 50.000 5.05 0.00 0.00 3.62
1285 1294 2.356330 CCAGTTAGTAAATGGGCCGGAA 60.356 50.000 19.51 0.00 0.00 4.30
1286 1295 1.210967 CCAGTTAGTAAATGGGCCGGA 59.789 52.381 19.51 0.00 0.00 5.14
1287 1296 1.210967 TCCAGTTAGTAAATGGGCCGG 59.789 52.381 25.03 0.00 34.71 6.13
1288 1297 2.285977 GTCCAGTTAGTAAATGGGCCG 58.714 52.381 25.03 4.15 32.38 6.13
1290 1299 2.285977 CGGTCCAGTTAGTAAATGGGC 58.714 52.381 25.03 23.89 38.01 5.36
1291 1300 3.267483 CACGGTCCAGTTAGTAAATGGG 58.733 50.000 25.03 14.05 34.71 4.00
1292 1301 2.676342 GCACGGTCCAGTTAGTAAATGG 59.324 50.000 20.90 20.90 35.30 3.16
1293 1302 2.676342 GGCACGGTCCAGTTAGTAAATG 59.324 50.000 3.33 3.33 0.00 2.32
1294 1303 2.570302 AGGCACGGTCCAGTTAGTAAAT 59.430 45.455 0.00 0.00 0.00 1.40
1295 1304 1.972795 AGGCACGGTCCAGTTAGTAAA 59.027 47.619 0.00 0.00 0.00 2.01
1296 1305 1.274167 CAGGCACGGTCCAGTTAGTAA 59.726 52.381 0.00 0.00 0.00 2.24
1297 1306 0.892755 CAGGCACGGTCCAGTTAGTA 59.107 55.000 0.00 0.00 0.00 1.82
1298 1307 1.671742 CAGGCACGGTCCAGTTAGT 59.328 57.895 0.00 0.00 0.00 2.24
1299 1308 1.079127 CCAGGCACGGTCCAGTTAG 60.079 63.158 0.00 0.00 0.00 2.34
1300 1309 2.589157 CCCAGGCACGGTCCAGTTA 61.589 63.158 0.00 0.00 0.00 2.24
1301 1310 3.953775 CCCAGGCACGGTCCAGTT 61.954 66.667 0.00 0.00 0.00 3.16
1342 1351 1.737355 TATACGGGCCGTACTGTGCC 61.737 60.000 38.40 8.88 45.07 5.01
1343 1352 0.102844 TTATACGGGCCGTACTGTGC 59.897 55.000 38.40 0.00 45.07 4.57
1344 1353 2.806608 ATTATACGGGCCGTACTGTG 57.193 50.000 38.40 5.79 45.07 3.66
1345 1354 4.379813 CGATTATTATACGGGCCGTACTGT 60.380 45.833 38.40 27.09 45.07 3.55
1346 1355 4.100529 CGATTATTATACGGGCCGTACTG 58.899 47.826 38.40 18.31 45.07 2.74
1347 1356 3.758554 ACGATTATTATACGGGCCGTACT 59.241 43.478 38.40 27.50 45.07 2.73
1348 1357 3.853671 CACGATTATTATACGGGCCGTAC 59.146 47.826 38.40 23.00 45.07 3.67
1349 1358 4.095410 CACGATTATTATACGGGCCGTA 57.905 45.455 37.76 37.76 46.28 4.02
1350 1359 2.950433 CACGATTATTATACGGGCCGT 58.050 47.619 35.91 35.91 44.35 5.68
1354 1363 3.682858 CCAAGGCACGATTATTATACGGG 59.317 47.826 0.00 0.00 0.00 5.28
1355 1364 3.124636 GCCAAGGCACGATTATTATACGG 59.875 47.826 6.14 0.00 41.49 4.02
1356 1365 3.181534 CGCCAAGGCACGATTATTATACG 60.182 47.826 12.19 0.00 42.06 3.06
1357 1366 3.124636 CCGCCAAGGCACGATTATTATAC 59.875 47.826 12.19 0.00 42.06 1.47
1358 1367 3.331150 CCGCCAAGGCACGATTATTATA 58.669 45.455 12.19 0.00 42.06 0.98
1359 1368 2.151202 CCGCCAAGGCACGATTATTAT 58.849 47.619 12.19 0.00 42.06 1.28
1360 1369 1.588674 CCGCCAAGGCACGATTATTA 58.411 50.000 12.19 0.00 42.06 0.98
1361 1370 1.101049 CCCGCCAAGGCACGATTATT 61.101 55.000 12.19 0.00 42.06 1.40
1362 1371 1.525995 CCCGCCAAGGCACGATTAT 60.526 57.895 12.19 0.00 42.06 1.28
1363 1372 2.124901 CCCGCCAAGGCACGATTA 60.125 61.111 12.19 0.00 42.06 1.75
1389 1398 0.179048 CATCCTAATCGTGCCTGGCA 60.179 55.000 19.30 19.30 35.60 4.92
1390 1399 0.886490 CCATCCTAATCGTGCCTGGC 60.886 60.000 12.87 12.87 0.00 4.85
1391 1400 0.250467 CCCATCCTAATCGTGCCTGG 60.250 60.000 0.00 0.00 0.00 4.45
1392 1401 0.886490 GCCCATCCTAATCGTGCCTG 60.886 60.000 0.00 0.00 0.00 4.85
1393 1402 1.451936 GCCCATCCTAATCGTGCCT 59.548 57.895 0.00 0.00 0.00 4.75
1394 1403 1.600916 GGCCCATCCTAATCGTGCC 60.601 63.158 0.00 0.00 0.00 5.01
1395 1404 1.961277 CGGCCCATCCTAATCGTGC 60.961 63.158 0.00 0.00 0.00 5.34
1396 1405 0.880278 CACGGCCCATCCTAATCGTG 60.880 60.000 0.00 0.00 41.09 4.35
1397 1406 1.445942 CACGGCCCATCCTAATCGT 59.554 57.895 0.00 0.00 0.00 3.73
1398 1407 1.961277 GCACGGCCCATCCTAATCG 60.961 63.158 0.00 0.00 0.00 3.34
1399 1408 1.600916 GGCACGGCCCATCCTAATC 60.601 63.158 0.00 0.00 44.06 1.75
1400 1409 2.515901 GGCACGGCCCATCCTAAT 59.484 61.111 0.00 0.00 44.06 1.73
1435 1444 0.818040 GGTATAGCTGGCCAAACGGG 60.818 60.000 7.01 0.00 40.85 5.28
1436 1445 0.180406 AGGTATAGCTGGCCAAACGG 59.820 55.000 7.01 0.00 0.00 4.44
1437 1446 1.299541 CAGGTATAGCTGGCCAAACG 58.700 55.000 21.78 0.00 0.00 3.60
1438 1447 1.025041 GCAGGTATAGCTGGCCAAAC 58.975 55.000 28.27 10.77 0.00 2.93
1439 1448 0.623194 TGCAGGTATAGCTGGCCAAA 59.377 50.000 28.27 7.23 0.00 3.28
1440 1449 0.623194 TTGCAGGTATAGCTGGCCAA 59.377 50.000 28.27 21.84 0.00 4.52
1441 1450 0.846015 ATTGCAGGTATAGCTGGCCA 59.154 50.000 28.27 18.00 0.00 5.36
1442 1451 1.242076 CATTGCAGGTATAGCTGGCC 58.758 55.000 28.27 15.90 0.00 5.36
1443 1452 1.242076 CCATTGCAGGTATAGCTGGC 58.758 55.000 28.27 21.19 0.00 4.85
1444 1453 1.242076 GCCATTGCAGGTATAGCTGG 58.758 55.000 28.27 16.18 37.47 4.85
1445 1454 0.870393 CGCCATTGCAGGTATAGCTG 59.130 55.000 24.48 24.48 37.32 4.24
1446 1455 0.758734 TCGCCATTGCAGGTATAGCT 59.241 50.000 0.00 0.00 37.32 3.32
1447 1456 0.868406 GTCGCCATTGCAGGTATAGC 59.132 55.000 0.00 0.00 37.32 2.97
1448 1457 1.202639 TGGTCGCCATTGCAGGTATAG 60.203 52.381 0.00 0.00 37.32 1.31
1449 1458 0.833949 TGGTCGCCATTGCAGGTATA 59.166 50.000 0.00 0.00 37.32 1.47
1450 1459 0.748005 GTGGTCGCCATTGCAGGTAT 60.748 55.000 1.90 0.00 35.28 2.73
1451 1460 1.376683 GTGGTCGCCATTGCAGGTA 60.377 57.895 1.90 0.00 35.28 3.08
1452 1461 2.672996 GTGGTCGCCATTGCAGGT 60.673 61.111 1.90 0.00 35.28 4.00
1674 1683 4.564821 CCAGGAATCCGGAAGTAGAAAACA 60.565 45.833 9.01 0.00 0.00 2.83
2068 2078 3.880490 ACTCAAATGGCTGTTTACACGAA 59.120 39.130 0.00 0.00 0.00 3.85
2085 2095 7.169813 GTCGATGATATGAGCACAAATACTCAA 59.830 37.037 0.00 0.00 45.49 3.02
2123 2133 6.072673 GCTTCAGTAAAAACTAAGCTGCCTAA 60.073 38.462 0.00 0.00 39.51 2.69
2141 2160 4.999950 CAGTAATCCAAAGTCAGCTTCAGT 59.000 41.667 0.00 0.00 33.01 3.41
2213 2232 6.154192 ACTTGCTTAGATCTCTGAGAACATGA 59.846 38.462 12.00 0.00 31.92 3.07
2260 2279 0.597118 GCACAGCGCATTGTCCAAAA 60.597 50.000 11.47 0.00 41.79 2.44
2331 2350 6.073222 ACAAACGATGGAGTAGCTGTAAAAAG 60.073 38.462 0.00 0.00 0.00 2.27
2350 2369 6.146184 AGTCATTGTTACTCAGATCACAAACG 59.854 38.462 0.00 0.00 33.02 3.60
2400 2419 3.679389 ACTGACCAACCAGATGAATGAC 58.321 45.455 0.00 0.00 37.59 3.06
2454 2473 4.792068 AGATCTGTGTTGGTTTCCTTCAA 58.208 39.130 0.00 0.00 0.00 2.69
2766 2786 2.949447 ACAGGTCCCGGTAATATACGT 58.051 47.619 0.00 0.00 0.00 3.57
2778 2798 2.303311 GGCAGATATCCTTACAGGTCCC 59.697 54.545 0.00 0.00 36.53 4.46
2838 2859 8.830580 GTGTACTGCACATGATTAAATAGACAT 58.169 33.333 0.00 0.00 46.91 3.06
2839 2860 8.196802 GTGTACTGCACATGATTAAATAGACA 57.803 34.615 0.00 0.00 46.91 3.41
2872 2893 3.267483 GCAATTCCTTAGTCGCAGGTAA 58.733 45.455 0.00 0.00 32.59 2.85
2928 2949 1.017387 CCTGCCTCCTTTTCGCATAC 58.983 55.000 0.00 0.00 0.00 2.39
2931 2952 1.150536 AACCTGCCTCCTTTTCGCA 59.849 52.632 0.00 0.00 0.00 5.10
2934 2955 0.961753 CACCAACCTGCCTCCTTTTC 59.038 55.000 0.00 0.00 0.00 2.29
3077 3098 8.276325 CAGAGTACAAATGACTAAAAGACACAC 58.724 37.037 0.00 0.00 0.00 3.82
3089 3110 4.273480 AGCACAACACAGAGTACAAATGAC 59.727 41.667 0.00 0.00 0.00 3.06
3095 3116 1.810031 GCCAGCACAACACAGAGTACA 60.810 52.381 0.00 0.00 0.00 2.90
3167 3203 9.692325 AATGAGCTCAAGTAAAATATCTCCTTT 57.308 29.630 22.50 0.64 0.00 3.11
3400 3436 9.984190 AAATTTTGCAATGCTTATCCAATTTTT 57.016 22.222 6.82 0.00 0.00 1.94
3401 3437 9.984190 AAAATTTTGCAATGCTTATCCAATTTT 57.016 22.222 14.88 14.88 0.00 1.82
3402 3438 9.413048 CAAAATTTTGCAATGCTTATCCAATTT 57.587 25.926 17.48 3.49 0.00 1.82
3403 3439 8.973835 CAAAATTTTGCAATGCTTATCCAATT 57.026 26.923 17.48 0.00 0.00 2.32
3442 3480 4.523083 AGTAGCTGACACTCTAGAGAAGG 58.477 47.826 26.57 16.21 0.00 3.46
3456 3494 7.882791 TCAAAATATGACCTGAAAAGTAGCTGA 59.117 33.333 0.00 0.00 31.50 4.26
3597 3656 2.964209 ACTGAAAGAGTCCTCTGTCCA 58.036 47.619 11.16 3.59 42.07 4.02
3598 3657 4.039852 AGAAACTGAAAGAGTCCTCTGTCC 59.960 45.833 11.16 0.00 42.07 4.02
3605 3664 5.872070 CCTATGTCAGAAACTGAAAGAGTCC 59.128 44.000 11.09 0.00 42.46 3.85
3620 3679 6.940739 ACTAGCTTAATATGCCCTATGTCAG 58.059 40.000 0.00 0.00 0.00 3.51
3724 3783 3.896272 GGGACGGAAGGAGTATTCTGTAT 59.104 47.826 1.12 0.00 46.37 2.29
3738 3797 4.320870 GAGTCACTTATTTTGGGACGGAA 58.679 43.478 0.00 0.00 33.84 4.30
4023 4150 0.407528 TTGCATACCTTTCCCTGGCA 59.592 50.000 0.00 0.00 0.00 4.92
4120 4249 0.822164 GGCTTTCCAGGACTACGCTA 59.178 55.000 0.00 0.00 0.00 4.26
4121 4250 1.192146 TGGCTTTCCAGGACTACGCT 61.192 55.000 0.00 0.00 37.47 5.07
4137 4266 6.050432 TCAATAAAATGCAGGATTTCATGGC 58.950 36.000 0.00 0.00 32.76 4.40
4370 4502 2.435059 GACTGCGCCTCTTGGTCC 60.435 66.667 4.18 0.00 35.27 4.46
4525 4657 3.821841 ACTAGTGCAAAGCATTTAACGC 58.178 40.909 0.00 0.00 41.91 4.84
4536 4668 5.626142 TGGGAAAATAGTGACTAGTGCAAA 58.374 37.500 0.00 0.00 0.00 3.68
4551 4683 3.855668 TGTCCTCAAACCATGGGAAAAT 58.144 40.909 18.09 0.00 32.38 1.82
4632 4765 6.479095 TGTTGCAAAAGAAAAAGACTTTGG 57.521 33.333 0.00 0.00 37.59 3.28
4694 4827 4.988598 CGGCTCACACCCGTGCTT 62.989 66.667 0.00 0.00 43.28 3.91
4699 4832 2.432628 GTCTTCGGCTCACACCCG 60.433 66.667 0.00 0.00 46.88 5.28
4782 4938 7.515528 GCGGTTGTTATTTTGGTGTTTTACTTC 60.516 37.037 0.00 0.00 0.00 3.01
4786 4942 5.048507 GGCGGTTGTTATTTTGGTGTTTTA 58.951 37.500 0.00 0.00 0.00 1.52
4789 4945 2.544069 CGGCGGTTGTTATTTTGGTGTT 60.544 45.455 0.00 0.00 0.00 3.32
4793 4949 0.242555 AGCGGCGGTTGTTATTTTGG 59.757 50.000 5.44 0.00 0.00 3.28
4799 4955 2.696409 TTCGTCAGCGGCGGTTGTTA 62.696 55.000 9.73 0.00 38.89 2.41
4811 4967 2.483876 TCTCTTTGTTGGCTTCGTCAG 58.516 47.619 0.00 0.00 0.00 3.51
4812 4968 2.613026 TCTCTTTGTTGGCTTCGTCA 57.387 45.000 0.00 0.00 0.00 4.35
4813 4969 3.963383 TTTCTCTTTGTTGGCTTCGTC 57.037 42.857 0.00 0.00 0.00 4.20
4814 4970 3.632145 ACATTTCTCTTTGTTGGCTTCGT 59.368 39.130 0.00 0.00 0.00 3.85
4815 4971 4.228912 ACATTTCTCTTTGTTGGCTTCG 57.771 40.909 0.00 0.00 0.00 3.79
4816 4972 6.739112 AGTTACATTTCTCTTTGTTGGCTTC 58.261 36.000 0.00 0.00 0.00 3.86
4817 4973 6.321181 TGAGTTACATTTCTCTTTGTTGGCTT 59.679 34.615 0.00 0.00 0.00 4.35
4818 4974 5.827797 TGAGTTACATTTCTCTTTGTTGGCT 59.172 36.000 0.00 0.00 0.00 4.75
4819 4975 6.072112 TGAGTTACATTTCTCTTTGTTGGC 57.928 37.500 0.00 0.00 0.00 4.52
4834 4990 6.068010 ACATGTTGGATCCTTTTGAGTTACA 58.932 36.000 14.23 3.95 0.00 2.41
4868 5024 4.728772 TCTGGTCTTTGTTCATCCACATT 58.271 39.130 0.00 0.00 0.00 2.71
4870 5026 3.855255 TCTGGTCTTTGTTCATCCACA 57.145 42.857 0.00 0.00 0.00 4.17
4872 5028 4.639078 TCATCTGGTCTTTGTTCATCCA 57.361 40.909 0.00 0.00 0.00 3.41
4938 5094 8.911247 ATTTACTCTAAATCCAAACGCAAATC 57.089 30.769 0.00 0.00 33.28 2.17
4978 5134 2.096248 TCCATAAATGTGGCCGGTTTC 58.904 47.619 1.90 0.00 39.19 2.78
4980 5136 1.470051 GTCCATAAATGTGGCCGGTT 58.530 50.000 1.90 0.00 39.19 4.44
4981 5137 0.395173 GGTCCATAAATGTGGCCGGT 60.395 55.000 1.90 0.00 39.19 5.28
4982 5138 0.106719 AGGTCCATAAATGTGGCCGG 60.107 55.000 0.00 0.00 39.17 6.13
4983 5139 2.631160 TAGGTCCATAAATGTGGCCG 57.369 50.000 0.00 0.00 39.17 6.13
4984 5140 4.892934 TCATTTAGGTCCATAAATGTGGCC 59.107 41.667 18.47 0.00 46.34 5.36
4985 5141 6.463995 TTCATTTAGGTCCATAAATGTGGC 57.536 37.500 18.47 0.00 46.34 5.01
5029 5190 7.093988 TGTCAGTATAATGATGGTGGGTTTTTG 60.094 37.037 6.11 0.00 0.00 2.44
5030 5191 6.951198 TGTCAGTATAATGATGGTGGGTTTTT 59.049 34.615 6.11 0.00 0.00 1.94
5072 5233 3.418684 AAACCGTTCTAGTGGAGCAAT 57.581 42.857 5.61 0.00 0.00 3.56
5108 5269 2.191786 CTTGCCATCGGTACCCACCA 62.192 60.000 6.25 0.00 46.14 4.17
5109 5270 1.451387 CTTGCCATCGGTACCCACC 60.451 63.158 6.25 0.00 41.93 4.61
5132 5293 1.536073 CCCGTCTCTTCTCTGCCACA 61.536 60.000 0.00 0.00 0.00 4.17
5138 5299 2.164338 GTTGTCTCCCGTCTCTTCTCT 58.836 52.381 0.00 0.00 0.00 3.10
5142 5303 1.179814 AGCGTTGTCTCCCGTCTCTT 61.180 55.000 0.00 0.00 0.00 2.85
5165 5326 2.580815 GGGGAGACGGGGTTAACG 59.419 66.667 0.00 0.00 37.36 3.18
5187 5348 2.549754 ACATGACGCTTGTGGAGAAAAG 59.450 45.455 0.00 0.00 0.00 2.27
5244 5405 8.107095 AGTGGTTAAAGAACTGGCTATCATTTA 58.893 33.333 0.00 0.00 35.74 1.40
5249 5410 6.049790 CCTAGTGGTTAAAGAACTGGCTATC 58.950 44.000 0.00 0.00 35.74 2.08
5290 5451 3.313713 TAACCCTAACCCGTGCCGC 62.314 63.158 0.00 0.00 0.00 6.53
5291 5452 1.153509 CTAACCCTAACCCGTGCCG 60.154 63.158 0.00 0.00 0.00 5.69
5292 5453 1.222661 CCTAACCCTAACCCGTGCC 59.777 63.158 0.00 0.00 0.00 5.01
5293 5454 0.835276 ATCCTAACCCTAACCCGTGC 59.165 55.000 0.00 0.00 0.00 5.34
5294 5455 1.068127 CGATCCTAACCCTAACCCGTG 59.932 57.143 0.00 0.00 0.00 4.94
5295 5456 1.342374 ACGATCCTAACCCTAACCCGT 60.342 52.381 0.00 0.00 0.00 5.28
5296 5457 1.406903 ACGATCCTAACCCTAACCCG 58.593 55.000 0.00 0.00 0.00 5.28
5297 5458 2.896044 CCTACGATCCTAACCCTAACCC 59.104 54.545 0.00 0.00 0.00 4.11
5298 5459 3.570540 ACCTACGATCCTAACCCTAACC 58.429 50.000 0.00 0.00 0.00 2.85
5299 5460 6.006449 TCATACCTACGATCCTAACCCTAAC 58.994 44.000 0.00 0.00 0.00 2.34
5300 5461 6.204852 TCATACCTACGATCCTAACCCTAA 57.795 41.667 0.00 0.00 0.00 2.69
5301 5462 5.848286 TCATACCTACGATCCTAACCCTA 57.152 43.478 0.00 0.00 0.00 3.53
5302 5463 4.736611 TCATACCTACGATCCTAACCCT 57.263 45.455 0.00 0.00 0.00 4.34
5303 5464 5.359292 GGTATCATACCTACGATCCTAACCC 59.641 48.000 6.59 0.00 45.52 4.11
5304 5465 6.448207 GGTATCATACCTACGATCCTAACC 57.552 45.833 6.59 0.00 45.52 2.85
5318 5479 6.861065 ATCGTTTCCAACATGGTATCATAC 57.139 37.500 0.00 0.00 39.03 2.39
5319 5480 9.567776 AATAATCGTTTCCAACATGGTATCATA 57.432 29.630 0.00 0.00 39.03 2.15
5320 5481 8.463930 AATAATCGTTTCCAACATGGTATCAT 57.536 30.769 0.00 0.00 39.03 2.45
5321 5482 7.873719 AATAATCGTTTCCAACATGGTATCA 57.126 32.000 0.00 0.00 39.03 2.15
5322 5483 9.019764 CAAAATAATCGTTTCCAACATGGTATC 57.980 33.333 0.00 0.00 39.03 2.24
5323 5484 7.978975 CCAAAATAATCGTTTCCAACATGGTAT 59.021 33.333 0.00 0.00 39.03 2.73
5324 5485 7.316640 CCAAAATAATCGTTTCCAACATGGTA 58.683 34.615 0.00 0.00 39.03 3.25
5325 5486 6.162777 CCAAAATAATCGTTTCCAACATGGT 58.837 36.000 0.00 0.00 39.03 3.55
5326 5487 5.063312 GCCAAAATAATCGTTTCCAACATGG 59.937 40.000 0.00 0.00 39.43 3.66
5327 5488 5.636965 TGCCAAAATAATCGTTTCCAACATG 59.363 36.000 0.00 0.00 0.00 3.21
5328 5489 5.788450 TGCCAAAATAATCGTTTCCAACAT 58.212 33.333 0.00 0.00 0.00 2.71
5329 5490 5.201713 TGCCAAAATAATCGTTTCCAACA 57.798 34.783 0.00 0.00 0.00 3.33
5330 5491 6.533185 CATTGCCAAAATAATCGTTTCCAAC 58.467 36.000 0.00 0.00 0.00 3.77
5331 5492 5.121454 GCATTGCCAAAATAATCGTTTCCAA 59.879 36.000 0.00 0.00 0.00 3.53
5332 5493 4.629200 GCATTGCCAAAATAATCGTTTCCA 59.371 37.500 0.00 0.00 0.00 3.53
5333 5494 4.869861 AGCATTGCCAAAATAATCGTTTCC 59.130 37.500 4.70 0.00 0.00 3.13
5334 5495 6.090628 TGAAGCATTGCCAAAATAATCGTTTC 59.909 34.615 4.70 0.00 0.00 2.78
5335 5496 5.931146 TGAAGCATTGCCAAAATAATCGTTT 59.069 32.000 4.70 0.00 0.00 3.60
5336 5497 5.348451 GTGAAGCATTGCCAAAATAATCGTT 59.652 36.000 4.70 0.00 0.00 3.85
5337 5498 4.864247 GTGAAGCATTGCCAAAATAATCGT 59.136 37.500 4.70 0.00 0.00 3.73
5338 5499 4.027458 CGTGAAGCATTGCCAAAATAATCG 60.027 41.667 4.70 0.00 0.00 3.34
5339 5500 5.101628 TCGTGAAGCATTGCCAAAATAATC 58.898 37.500 4.70 0.00 0.00 1.75
5340 5501 5.070770 TCGTGAAGCATTGCCAAAATAAT 57.929 34.783 4.70 0.00 0.00 1.28
5341 5502 4.511617 TCGTGAAGCATTGCCAAAATAA 57.488 36.364 4.70 0.00 0.00 1.40
5342 5503 4.082300 ACATCGTGAAGCATTGCCAAAATA 60.082 37.500 4.70 0.00 0.00 1.40
5343 5504 3.255725 CATCGTGAAGCATTGCCAAAAT 58.744 40.909 4.70 0.00 0.00 1.82
5344 5505 2.035704 ACATCGTGAAGCATTGCCAAAA 59.964 40.909 4.70 0.00 0.00 2.44
5345 5506 1.612950 ACATCGTGAAGCATTGCCAAA 59.387 42.857 4.70 0.00 0.00 3.28
5346 5507 1.246649 ACATCGTGAAGCATTGCCAA 58.753 45.000 4.70 0.00 0.00 4.52
5347 5508 2.106477 TACATCGTGAAGCATTGCCA 57.894 45.000 4.70 0.00 0.00 4.92
5348 5509 3.065233 TCAATACATCGTGAAGCATTGCC 59.935 43.478 4.70 0.00 0.00 4.52
5349 5510 4.277257 TCAATACATCGTGAAGCATTGC 57.723 40.909 0.00 0.00 0.00 3.56
5350 5511 5.135330 CGATCAATACATCGTGAAGCATTG 58.865 41.667 0.00 0.00 40.72 2.82
5351 5512 4.212004 CCGATCAATACATCGTGAAGCATT 59.788 41.667 2.46 0.00 43.53 3.56
5352 5513 3.742882 CCGATCAATACATCGTGAAGCAT 59.257 43.478 2.46 0.00 43.53 3.79
5353 5514 3.123050 CCGATCAATACATCGTGAAGCA 58.877 45.455 2.46 0.00 43.53 3.91
5354 5515 3.060272 CACCGATCAATACATCGTGAAGC 60.060 47.826 2.46 0.00 43.53 3.86
5355 5516 3.060272 GCACCGATCAATACATCGTGAAG 60.060 47.826 2.46 0.00 43.53 3.02
5356 5517 2.863740 GCACCGATCAATACATCGTGAA 59.136 45.455 2.46 0.00 43.53 3.18
5357 5518 2.159170 TGCACCGATCAATACATCGTGA 60.159 45.455 2.46 0.00 43.53 4.35
5358 5519 2.200899 TGCACCGATCAATACATCGTG 58.799 47.619 2.46 2.71 43.53 4.35
5359 5520 2.595124 TGCACCGATCAATACATCGT 57.405 45.000 2.46 0.00 43.53 3.73
5360 5521 3.846023 GCTTTGCACCGATCAATACATCG 60.846 47.826 0.00 0.00 44.45 3.84
5361 5522 3.621794 GCTTTGCACCGATCAATACATC 58.378 45.455 0.00 0.00 0.00 3.06
5362 5523 2.032054 CGCTTTGCACCGATCAATACAT 59.968 45.455 0.00 0.00 0.00 2.29
5363 5524 1.396648 CGCTTTGCACCGATCAATACA 59.603 47.619 0.00 0.00 0.00 2.29
5364 5525 1.856014 GCGCTTTGCACCGATCAATAC 60.856 52.381 0.00 0.00 45.45 1.89
5365 5526 0.376852 GCGCTTTGCACCGATCAATA 59.623 50.000 0.00 0.00 45.45 1.90
5366 5527 1.137404 GCGCTTTGCACCGATCAAT 59.863 52.632 0.00 0.00 45.45 2.57
5367 5528 2.560861 GCGCTTTGCACCGATCAA 59.439 55.556 0.00 0.00 45.45 2.57
5376 5537 2.734606 TCCATATATACGTGCGCTTTGC 59.265 45.455 9.73 0.00 46.70 3.68
5377 5538 3.987868 ACTCCATATATACGTGCGCTTTG 59.012 43.478 9.73 0.00 0.00 2.77
5378 5539 4.252971 ACTCCATATATACGTGCGCTTT 57.747 40.909 9.73 0.00 0.00 3.51
5379 5540 3.936372 ACTCCATATATACGTGCGCTT 57.064 42.857 9.73 0.00 0.00 4.68
5380 5541 3.754850 TGTACTCCATATATACGTGCGCT 59.245 43.478 9.73 0.00 0.00 5.92
5381 5542 4.087510 TGTACTCCATATATACGTGCGC 57.912 45.455 0.00 0.00 0.00 6.09
5382 5543 6.087687 CACTTTGTACTCCATATATACGTGCG 59.912 42.308 0.00 0.00 0.00 5.34
5383 5544 6.365247 CCACTTTGTACTCCATATATACGTGC 59.635 42.308 0.00 0.00 0.00 5.34
5384 5545 6.866770 CCCACTTTGTACTCCATATATACGTG 59.133 42.308 0.00 0.00 0.00 4.49
5385 5546 6.517864 GCCCACTTTGTACTCCATATATACGT 60.518 42.308 0.00 0.00 0.00 3.57
5386 5547 5.867716 GCCCACTTTGTACTCCATATATACG 59.132 44.000 0.00 0.00 0.00 3.06
5387 5548 6.171213 GGCCCACTTTGTACTCCATATATAC 58.829 44.000 0.00 0.00 0.00 1.47
5388 5549 5.847265 TGGCCCACTTTGTACTCCATATATA 59.153 40.000 0.00 0.00 0.00 0.86
5389 5550 4.663120 TGGCCCACTTTGTACTCCATATAT 59.337 41.667 0.00 0.00 0.00 0.86
5390 5551 4.041464 TGGCCCACTTTGTACTCCATATA 58.959 43.478 0.00 0.00 0.00 0.86
5391 5552 2.849943 TGGCCCACTTTGTACTCCATAT 59.150 45.455 0.00 0.00 0.00 1.78
5392 5553 2.270858 TGGCCCACTTTGTACTCCATA 58.729 47.619 0.00 0.00 0.00 2.74
5393 5554 1.072266 TGGCCCACTTTGTACTCCAT 58.928 50.000 0.00 0.00 0.00 3.41
5394 5555 2.545969 TGGCCCACTTTGTACTCCA 58.454 52.632 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.