Multiple sequence alignment - TraesCS7B01G157100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G157100 chr7B 100.000 2663 0 0 1 2663 212420194 212417532 0.000000e+00 4918.0
1 TraesCS7B01G157100 chr7D 91.990 1236 52 21 549 1784 236011172 236009984 0.000000e+00 1690.0
2 TraesCS7B01G157100 chr7D 89.683 252 23 3 2414 2663 236000307 236000057 4.280000e-83 318.0
3 TraesCS7B01G157100 chr7D 92.517 147 11 0 1917 2063 236000801 236000655 7.470000e-51 211.0
4 TraesCS7B01G157100 chr7D 92.727 110 7 1 364 473 236011287 236011179 9.870000e-35 158.0
5 TraesCS7B01G157100 chr7A 91.653 1222 55 17 549 1770 251254544 251253370 0.000000e+00 1648.0
6 TraesCS7B01G157100 chr7A 85.062 482 58 11 1910 2384 251156247 251155773 1.850000e-131 479.0
7 TraesCS7B01G157100 chr7A 94.545 55 2 1 2600 2654 251155264 251155211 1.700000e-12 84.2
8 TraesCS7B01G157100 chr6D 83.634 886 107 22 827 1690 106079724 106080593 0.000000e+00 798.0
9 TraesCS7B01G157100 chr6A 83.484 884 112 18 827 1690 129340697 129341566 0.000000e+00 793.0
10 TraesCS7B01G157100 chr6B 83.145 884 105 22 827 1690 192926024 192926883 0.000000e+00 767.0
11 TraesCS7B01G157100 chr5B 79.231 520 85 13 1168 1665 271665039 271665557 9.130000e-90 340.0
12 TraesCS7B01G157100 chr5D 78.599 514 87 13 1174 1665 233413624 233413112 4.280000e-83 318.0
13 TraesCS7B01G157100 chr5A 77.973 513 90 13 1175 1665 321328886 321328375 1.550000e-77 300.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G157100 chr7B 212417532 212420194 2662 True 4918.0 4918 100.0000 1 2663 1 chr7B.!!$R1 2662
1 TraesCS7B01G157100 chr7D 236009984 236011287 1303 True 924.0 1690 92.3585 364 1784 2 chr7D.!!$R2 1420
2 TraesCS7B01G157100 chr7D 236000057 236000801 744 True 264.5 318 91.1000 1917 2663 2 chr7D.!!$R1 746
3 TraesCS7B01G157100 chr7A 251253370 251254544 1174 True 1648.0 1648 91.6530 549 1770 1 chr7A.!!$R1 1221
4 TraesCS7B01G157100 chr7A 251155211 251156247 1036 True 281.6 479 89.8035 1910 2654 2 chr7A.!!$R2 744
5 TraesCS7B01G157100 chr6D 106079724 106080593 869 False 798.0 798 83.6340 827 1690 1 chr6D.!!$F1 863
6 TraesCS7B01G157100 chr6A 129340697 129341566 869 False 793.0 793 83.4840 827 1690 1 chr6A.!!$F1 863
7 TraesCS7B01G157100 chr6B 192926024 192926883 859 False 767.0 767 83.1450 827 1690 1 chr6B.!!$F1 863
8 TraesCS7B01G157100 chr5B 271665039 271665557 518 False 340.0 340 79.2310 1168 1665 1 chr5B.!!$F1 497
9 TraesCS7B01G157100 chr5D 233413112 233413624 512 True 318.0 318 78.5990 1174 1665 1 chr5D.!!$R1 491
10 TraesCS7B01G157100 chr5A 321328375 321328886 511 True 300.0 300 77.9730 1175 1665 1 chr5A.!!$R1 490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
316 317 0.02811 GCGGGTCAAGATTTCGATGC 59.972 55.0 0.0 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1710 1754 1.014044 TCGAGAACCATTGAGCACGC 61.014 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.967332 TTGCACTAAGTGGTACTACCC 57.033 47.619 5.65 0.00 37.50 3.69
22 23 3.179902 TGCACTAAGTGGTACTACCCT 57.820 47.619 5.65 0.00 37.50 4.34
23 24 3.094572 TGCACTAAGTGGTACTACCCTC 58.905 50.000 5.65 0.00 37.50 4.30
24 25 3.245514 TGCACTAAGTGGTACTACCCTCT 60.246 47.826 5.65 0.00 37.50 3.69
25 26 3.130693 GCACTAAGTGGTACTACCCTCTG 59.869 52.174 5.65 0.00 37.50 3.35
26 27 3.700038 CACTAAGTGGTACTACCCTCTGG 59.300 52.174 5.65 0.00 37.50 3.86
27 28 3.595138 ACTAAGTGGTACTACCCTCTGGA 59.405 47.826 5.65 0.00 37.50 3.86
28 29 2.830651 AGTGGTACTACCCTCTGGAG 57.169 55.000 5.65 0.00 37.50 3.86
29 30 2.285707 AGTGGTACTACCCTCTGGAGA 58.714 52.381 5.65 0.00 37.50 3.71
30 31 2.242708 AGTGGTACTACCCTCTGGAGAG 59.757 54.545 5.65 0.00 37.50 3.20
31 32 1.063867 TGGTACTACCCTCTGGAGAGC 60.064 57.143 2.59 0.00 40.75 4.09
32 33 1.063867 GGTACTACCCTCTGGAGAGCA 60.064 57.143 0.00 0.00 40.75 4.26
33 34 2.025898 GTACTACCCTCTGGAGAGCAC 58.974 57.143 0.00 0.00 40.75 4.40
34 35 0.707616 ACTACCCTCTGGAGAGCACT 59.292 55.000 0.00 0.00 40.75 4.40
35 36 1.923850 ACTACCCTCTGGAGAGCACTA 59.076 52.381 0.00 0.00 40.75 2.74
36 37 2.303175 CTACCCTCTGGAGAGCACTAC 58.697 57.143 0.00 0.00 40.75 2.73
37 38 0.707616 ACCCTCTGGAGAGCACTACT 59.292 55.000 0.00 0.00 40.75 2.57
38 39 1.923850 ACCCTCTGGAGAGCACTACTA 59.076 52.381 0.00 0.00 40.75 1.82
39 40 2.303175 CCCTCTGGAGAGCACTACTAC 58.697 57.143 0.00 0.00 40.75 2.73
40 41 2.303175 CCTCTGGAGAGCACTACTACC 58.697 57.143 0.00 0.00 40.75 3.18
41 42 1.944024 CTCTGGAGAGCACTACTACCG 59.056 57.143 0.00 0.00 35.13 4.02
42 43 1.281287 TCTGGAGAGCACTACTACCGT 59.719 52.381 0.00 0.00 0.00 4.83
43 44 2.093106 CTGGAGAGCACTACTACCGTT 58.907 52.381 0.00 0.00 0.00 4.44
44 45 1.816835 TGGAGAGCACTACTACCGTTG 59.183 52.381 0.00 0.00 0.00 4.10
45 46 1.817447 GGAGAGCACTACTACCGTTGT 59.183 52.381 0.00 0.00 0.00 3.32
46 47 2.230750 GGAGAGCACTACTACCGTTGTT 59.769 50.000 0.00 0.00 0.00 2.83
47 48 3.500014 GAGAGCACTACTACCGTTGTTC 58.500 50.000 0.00 0.00 0.00 3.18
48 49 2.230750 AGAGCACTACTACCGTTGTTCC 59.769 50.000 0.00 0.00 0.00 3.62
49 50 1.965643 AGCACTACTACCGTTGTTCCA 59.034 47.619 0.00 0.00 0.00 3.53
50 51 2.565834 AGCACTACTACCGTTGTTCCAT 59.434 45.455 0.00 0.00 0.00 3.41
51 52 3.007614 AGCACTACTACCGTTGTTCCATT 59.992 43.478 0.00 0.00 0.00 3.16
52 53 3.370061 GCACTACTACCGTTGTTCCATTC 59.630 47.826 0.00 0.00 0.00 2.67
53 54 4.562082 CACTACTACCGTTGTTCCATTCA 58.438 43.478 0.00 0.00 0.00 2.57
54 55 4.992319 CACTACTACCGTTGTTCCATTCAA 59.008 41.667 0.00 0.00 0.00 2.69
55 56 5.467399 CACTACTACCGTTGTTCCATTCAAA 59.533 40.000 0.00 0.00 0.00 2.69
56 57 4.823790 ACTACCGTTGTTCCATTCAAAC 57.176 40.909 0.00 0.00 0.00 2.93
57 58 4.457466 ACTACCGTTGTTCCATTCAAACT 58.543 39.130 0.00 0.00 0.00 2.66
58 59 3.708563 ACCGTTGTTCCATTCAAACTG 57.291 42.857 0.00 0.00 0.00 3.16
59 60 2.223711 ACCGTTGTTCCATTCAAACTGC 60.224 45.455 0.00 0.00 0.00 4.40
60 61 2.223688 CCGTTGTTCCATTCAAACTGCA 60.224 45.455 0.00 0.00 0.00 4.41
61 62 2.788786 CGTTGTTCCATTCAAACTGCAC 59.211 45.455 0.00 0.00 0.00 4.57
62 63 3.489059 CGTTGTTCCATTCAAACTGCACT 60.489 43.478 0.00 0.00 0.00 4.40
63 64 3.988379 TGTTCCATTCAAACTGCACTC 57.012 42.857 0.00 0.00 0.00 3.51
64 65 2.622942 TGTTCCATTCAAACTGCACTCC 59.377 45.455 0.00 0.00 0.00 3.85
65 66 1.522668 TCCATTCAAACTGCACTCCG 58.477 50.000 0.00 0.00 0.00 4.63
66 67 1.071542 TCCATTCAAACTGCACTCCGA 59.928 47.619 0.00 0.00 0.00 4.55
67 68 1.879380 CCATTCAAACTGCACTCCGAA 59.121 47.619 0.00 0.00 0.00 4.30
68 69 2.095567 CCATTCAAACTGCACTCCGAAG 60.096 50.000 0.00 0.00 0.00 3.79
84 85 3.027974 CGAAGGGCTAAGCTATACCAC 57.972 52.381 0.00 0.00 0.00 4.16
85 86 2.628657 CGAAGGGCTAAGCTATACCACT 59.371 50.000 0.00 0.00 0.00 4.00
86 87 3.553096 CGAAGGGCTAAGCTATACCACTG 60.553 52.174 0.00 0.00 0.00 3.66
87 88 1.694696 AGGGCTAAGCTATACCACTGC 59.305 52.381 0.00 0.00 0.00 4.40
88 89 1.416401 GGGCTAAGCTATACCACTGCA 59.584 52.381 0.00 0.00 0.00 4.41
89 90 2.039084 GGGCTAAGCTATACCACTGCAT 59.961 50.000 0.00 0.00 0.00 3.96
90 91 3.260884 GGGCTAAGCTATACCACTGCATA 59.739 47.826 0.00 0.00 0.00 3.14
91 92 4.499183 GGCTAAGCTATACCACTGCATAG 58.501 47.826 0.00 0.00 33.03 2.23
92 93 4.499183 GCTAAGCTATACCACTGCATAGG 58.501 47.826 3.19 3.19 31.29 2.57
93 94 4.220821 GCTAAGCTATACCACTGCATAGGA 59.779 45.833 11.20 0.00 31.29 2.94
94 95 4.608948 AAGCTATACCACTGCATAGGAC 57.391 45.455 11.20 0.00 0.00 3.85
95 96 2.900546 AGCTATACCACTGCATAGGACC 59.099 50.000 11.20 0.00 0.00 4.46
96 97 2.900546 GCTATACCACTGCATAGGACCT 59.099 50.000 11.20 0.00 0.00 3.85
97 98 3.325135 GCTATACCACTGCATAGGACCTT 59.675 47.826 11.20 0.00 0.00 3.50
98 99 3.845781 ATACCACTGCATAGGACCTTG 57.154 47.619 11.20 0.00 0.00 3.61
99 100 1.656587 ACCACTGCATAGGACCTTGA 58.343 50.000 11.20 0.00 0.00 3.02
100 101 2.200081 ACCACTGCATAGGACCTTGAT 58.800 47.619 11.20 0.00 0.00 2.57
101 102 3.384168 ACCACTGCATAGGACCTTGATA 58.616 45.455 11.20 0.00 0.00 2.15
102 103 3.389329 ACCACTGCATAGGACCTTGATAG 59.611 47.826 11.20 3.64 0.00 2.08
103 104 3.389329 CCACTGCATAGGACCTTGATAGT 59.611 47.826 0.00 4.20 0.00 2.12
104 105 4.588951 CCACTGCATAGGACCTTGATAGTA 59.411 45.833 0.00 0.00 0.00 1.82
105 106 5.509840 CCACTGCATAGGACCTTGATAGTAC 60.510 48.000 0.00 0.00 0.00 2.73
106 107 4.589374 ACTGCATAGGACCTTGATAGTACC 59.411 45.833 0.00 0.00 0.00 3.34
107 108 4.552674 TGCATAGGACCTTGATAGTACCA 58.447 43.478 0.00 0.00 0.00 3.25
108 109 4.344102 TGCATAGGACCTTGATAGTACCAC 59.656 45.833 0.00 0.00 0.00 4.16
109 110 4.262506 GCATAGGACCTTGATAGTACCACC 60.263 50.000 0.00 0.00 0.00 4.61
110 111 2.760581 AGGACCTTGATAGTACCACCC 58.239 52.381 0.00 0.00 0.00 4.61
111 112 2.318207 AGGACCTTGATAGTACCACCCT 59.682 50.000 0.00 0.00 0.00 4.34
112 113 3.534747 AGGACCTTGATAGTACCACCCTA 59.465 47.826 0.00 0.00 0.00 3.53
113 114 4.015918 AGGACCTTGATAGTACCACCCTAA 60.016 45.833 0.00 0.00 0.00 2.69
114 115 4.906060 GGACCTTGATAGTACCACCCTAAT 59.094 45.833 0.00 0.00 0.00 1.73
115 116 6.080009 GGACCTTGATAGTACCACCCTAATA 58.920 44.000 0.00 0.00 0.00 0.98
116 117 6.014755 GGACCTTGATAGTACCACCCTAATAC 60.015 46.154 0.00 0.00 0.00 1.89
117 118 6.690569 ACCTTGATAGTACCACCCTAATACT 58.309 40.000 0.00 0.00 33.73 2.12
118 119 6.553852 ACCTTGATAGTACCACCCTAATACTG 59.446 42.308 0.00 0.00 31.65 2.74
119 120 6.553852 CCTTGATAGTACCACCCTAATACTGT 59.446 42.308 0.00 0.00 31.65 3.55
120 121 7.727186 CCTTGATAGTACCACCCTAATACTGTA 59.273 40.741 0.00 0.00 31.65 2.74
121 122 8.701908 TTGATAGTACCACCCTAATACTGTAG 57.298 38.462 0.00 0.00 31.65 2.74
122 123 7.236529 TGATAGTACCACCCTAATACTGTAGG 58.763 42.308 0.00 0.00 40.48 3.18
123 124 4.221530 AGTACCACCCTAATACTGTAGGC 58.778 47.826 0.00 0.00 39.60 3.93
124 125 3.124856 ACCACCCTAATACTGTAGGCA 57.875 47.619 0.00 0.00 39.60 4.75
125 126 3.456842 ACCACCCTAATACTGTAGGCAA 58.543 45.455 0.00 0.00 39.60 4.52
126 127 3.847780 ACCACCCTAATACTGTAGGCAAA 59.152 43.478 0.00 0.00 39.60 3.68
127 128 4.290196 ACCACCCTAATACTGTAGGCAAAA 59.710 41.667 0.00 0.00 39.60 2.44
128 129 4.638865 CCACCCTAATACTGTAGGCAAAAC 59.361 45.833 0.00 0.00 39.60 2.43
129 130 5.250200 CACCCTAATACTGTAGGCAAAACA 58.750 41.667 0.00 0.00 39.60 2.83
131 132 5.249852 ACCCTAATACTGTAGGCAAAACAGA 59.750 40.000 17.90 5.79 45.89 3.41
132 133 5.817816 CCCTAATACTGTAGGCAAAACAGAG 59.182 44.000 17.90 7.52 45.89 3.35
133 134 5.817816 CCTAATACTGTAGGCAAAACAGAGG 59.182 44.000 17.90 11.53 45.89 3.69
134 135 2.568623 ACTGTAGGCAAAACAGAGGG 57.431 50.000 17.90 0.00 45.89 4.30
135 136 2.054799 ACTGTAGGCAAAACAGAGGGA 58.945 47.619 17.90 0.00 45.89 4.20
136 137 2.441750 ACTGTAGGCAAAACAGAGGGAA 59.558 45.455 17.90 0.00 45.89 3.97
137 138 3.074538 ACTGTAGGCAAAACAGAGGGAAT 59.925 43.478 17.90 0.00 45.89 3.01
138 139 3.420893 TGTAGGCAAAACAGAGGGAATG 58.579 45.455 0.00 0.00 0.00 2.67
139 140 2.978156 AGGCAAAACAGAGGGAATGA 57.022 45.000 0.00 0.00 0.00 2.57
140 141 3.243359 AGGCAAAACAGAGGGAATGAA 57.757 42.857 0.00 0.00 0.00 2.57
141 142 2.893489 AGGCAAAACAGAGGGAATGAAC 59.107 45.455 0.00 0.00 0.00 3.18
142 143 2.029020 GGCAAAACAGAGGGAATGAACC 60.029 50.000 0.00 0.00 0.00 3.62
143 144 2.627699 GCAAAACAGAGGGAATGAACCA 59.372 45.455 0.00 0.00 0.00 3.67
144 145 3.259123 GCAAAACAGAGGGAATGAACCAT 59.741 43.478 0.00 0.00 0.00 3.55
145 146 4.262592 GCAAAACAGAGGGAATGAACCATT 60.263 41.667 0.00 0.00 36.72 3.16
146 147 5.742838 GCAAAACAGAGGGAATGAACCATTT 60.743 40.000 0.00 0.00 33.90 2.32
147 148 5.473066 AAACAGAGGGAATGAACCATTTG 57.527 39.130 0.00 0.00 33.90 2.32
148 149 4.118168 ACAGAGGGAATGAACCATTTGT 57.882 40.909 0.00 0.00 34.97 2.83
149 150 3.828451 ACAGAGGGAATGAACCATTTGTG 59.172 43.478 0.00 0.00 37.58 3.33
150 151 4.081406 CAGAGGGAATGAACCATTTGTGA 58.919 43.478 0.00 0.00 33.90 3.58
151 152 4.708421 CAGAGGGAATGAACCATTTGTGAT 59.292 41.667 0.00 0.00 33.90 3.06
152 153 5.887598 CAGAGGGAATGAACCATTTGTGATA 59.112 40.000 0.00 0.00 33.90 2.15
153 154 6.039047 CAGAGGGAATGAACCATTTGTGATAG 59.961 42.308 0.00 0.00 33.90 2.08
154 155 5.831103 AGGGAATGAACCATTTGTGATAGT 58.169 37.500 0.00 0.00 33.90 2.12
155 156 6.256053 AGGGAATGAACCATTTGTGATAGTT 58.744 36.000 0.00 0.00 33.90 2.24
156 157 6.378280 AGGGAATGAACCATTTGTGATAGTTC 59.622 38.462 0.00 0.00 33.90 3.01
158 159 7.029563 GGAATGAACCATTTGTGATAGTTCAC 58.970 38.462 6.07 0.00 46.73 3.18
159 160 7.029563 GAATGAACCATTTGTGATAGTTCACC 58.970 38.462 6.07 0.00 46.73 4.02
160 161 7.841500 GAATGAACCATTTGTGATAGTTCACCC 60.842 40.741 6.07 0.00 46.73 4.61
168 169 4.749245 GTGATAGTTCACCCAACACTTG 57.251 45.455 0.00 0.00 45.45 3.16
177 178 3.226884 CCAACACTTGGTCCGGTAG 57.773 57.895 0.00 0.00 45.93 3.18
178 179 0.395312 CCAACACTTGGTCCGGTAGT 59.605 55.000 0.00 0.00 45.93 2.73
179 180 1.202722 CCAACACTTGGTCCGGTAGTT 60.203 52.381 0.00 0.00 45.93 2.24
180 181 2.567985 CAACACTTGGTCCGGTAGTTT 58.432 47.619 0.00 0.00 0.00 2.66
181 182 2.538512 ACACTTGGTCCGGTAGTTTC 57.461 50.000 0.00 0.00 0.00 2.78
182 183 1.269936 ACACTTGGTCCGGTAGTTTCG 60.270 52.381 0.00 0.00 0.00 3.46
183 184 0.320160 ACTTGGTCCGGTAGTTTCGC 60.320 55.000 0.00 0.00 0.00 4.70
184 185 0.037605 CTTGGTCCGGTAGTTTCGCT 60.038 55.000 0.00 0.00 0.00 4.93
185 186 0.037975 TTGGTCCGGTAGTTTCGCTC 60.038 55.000 0.00 0.00 0.00 5.03
186 187 1.153686 GGTCCGGTAGTTTCGCTCC 60.154 63.158 0.00 0.00 0.00 4.70
187 188 1.153686 GTCCGGTAGTTTCGCTCCC 60.154 63.158 0.00 0.00 0.00 4.30
188 189 1.607178 TCCGGTAGTTTCGCTCCCA 60.607 57.895 0.00 0.00 0.00 4.37
189 190 0.974010 TCCGGTAGTTTCGCTCCCAT 60.974 55.000 0.00 0.00 0.00 4.00
190 191 0.748450 CCGGTAGTTTCGCTCCCATA 59.252 55.000 0.00 0.00 0.00 2.74
191 192 1.537562 CCGGTAGTTTCGCTCCCATAC 60.538 57.143 0.00 0.00 0.00 2.39
192 193 1.849097 GGTAGTTTCGCTCCCATACG 58.151 55.000 0.00 0.00 0.00 3.06
193 194 1.537562 GGTAGTTTCGCTCCCATACGG 60.538 57.143 0.00 0.00 0.00 4.02
203 204 3.849951 CCATACGGGAGCGGCACT 61.850 66.667 1.45 0.00 40.01 4.40
204 205 2.495409 CCATACGGGAGCGGCACTA 61.495 63.158 1.45 0.00 40.01 2.74
205 206 1.299926 CATACGGGAGCGGCACTAC 60.300 63.158 1.45 0.00 0.00 2.73
215 216 2.189521 GGCACTACCGGTCATGGG 59.810 66.667 12.40 5.01 0.00 4.00
216 217 2.189521 GCACTACCGGTCATGGGG 59.810 66.667 12.40 2.02 0.00 4.96
217 218 2.363975 GCACTACCGGTCATGGGGA 61.364 63.158 12.40 0.00 0.00 4.81
218 219 1.520666 CACTACCGGTCATGGGGAC 59.479 63.158 12.40 0.00 46.20 4.46
227 228 2.538512 GTCATGGGGACGGTATTACC 57.461 55.000 2.50 2.50 36.65 2.85
228 229 1.764134 GTCATGGGGACGGTATTACCA 59.236 52.381 13.22 0.00 38.47 3.25
229 230 1.764134 TCATGGGGACGGTATTACCAC 59.236 52.381 13.22 6.16 38.47 4.16
230 231 1.487142 CATGGGGACGGTATTACCACA 59.513 52.381 13.22 0.00 41.47 4.17
231 232 1.654159 TGGGGACGGTATTACCACAA 58.346 50.000 13.22 0.00 38.47 3.33
232 233 1.555992 TGGGGACGGTATTACCACAAG 59.444 52.381 13.22 0.00 38.47 3.16
233 234 1.134310 GGGGACGGTATTACCACAAGG 60.134 57.143 13.22 0.00 38.47 3.61
244 245 2.946947 CCACAAGGTCACATGGTCC 58.053 57.895 0.00 0.00 0.00 4.46
245 246 0.955428 CCACAAGGTCACATGGTCCG 60.955 60.000 0.00 0.00 0.00 4.79
246 247 0.955428 CACAAGGTCACATGGTCCGG 60.955 60.000 0.00 0.00 0.00 5.14
247 248 1.374947 CAAGGTCACATGGTCCGGT 59.625 57.895 0.00 0.00 0.00 5.28
248 249 0.955428 CAAGGTCACATGGTCCGGTG 60.955 60.000 0.00 7.07 36.36 4.94
249 250 2.046314 GGTCACATGGTCCGGTGG 60.046 66.667 0.00 0.00 35.74 4.61
250 251 2.747686 GTCACATGGTCCGGTGGT 59.252 61.111 0.00 0.00 35.74 4.16
251 252 1.375523 GTCACATGGTCCGGTGGTC 60.376 63.158 0.00 4.53 35.74 4.02
252 253 2.046314 CACATGGTCCGGTGGTCC 60.046 66.667 0.00 0.87 0.00 4.46
264 265 1.481871 GGTGGTCCGTCATTCCTAGA 58.518 55.000 0.00 0.00 0.00 2.43
265 266 1.409427 GGTGGTCCGTCATTCCTAGAG 59.591 57.143 0.00 0.00 0.00 2.43
266 267 1.409427 GTGGTCCGTCATTCCTAGAGG 59.591 57.143 0.00 0.00 0.00 3.69
267 268 1.041437 GGTCCGTCATTCCTAGAGGG 58.959 60.000 0.00 0.00 41.25 4.30
268 269 0.389757 GTCCGTCATTCCTAGAGGGC 59.610 60.000 0.00 0.00 40.06 5.19
269 270 0.759436 TCCGTCATTCCTAGAGGGCC 60.759 60.000 0.00 0.00 40.06 5.80
270 271 0.760945 CCGTCATTCCTAGAGGGCCT 60.761 60.000 5.25 5.25 34.67 5.19
271 272 0.390860 CGTCATTCCTAGAGGGCCTG 59.609 60.000 12.95 0.00 35.41 4.85
272 273 1.794714 GTCATTCCTAGAGGGCCTGA 58.205 55.000 12.95 0.00 35.41 3.86
273 274 2.334023 GTCATTCCTAGAGGGCCTGAT 58.666 52.381 12.95 0.82 35.41 2.90
274 275 2.708325 GTCATTCCTAGAGGGCCTGATT 59.292 50.000 12.95 0.00 35.41 2.57
275 276 3.904339 GTCATTCCTAGAGGGCCTGATTA 59.096 47.826 12.95 0.00 35.41 1.75
276 277 4.020662 GTCATTCCTAGAGGGCCTGATTAG 60.021 50.000 12.95 10.02 35.41 1.73
278 279 2.152982 TCCTAGAGGGCCTGATTAGGA 58.847 52.381 24.05 24.05 46.38 2.94
279 280 2.110899 TCCTAGAGGGCCTGATTAGGAG 59.889 54.545 24.05 7.93 46.38 3.69
280 281 5.119383 TCCTAGAGGGCCTGATTAGGAGG 62.119 56.522 24.05 14.56 46.38 4.30
289 290 2.019984 CTGATTAGGAGGTGGCTTTGC 58.980 52.381 0.00 0.00 0.00 3.68
290 291 1.017387 GATTAGGAGGTGGCTTTGCG 58.983 55.000 0.00 0.00 0.00 4.85
291 292 0.394352 ATTAGGAGGTGGCTTTGCGG 60.394 55.000 0.00 0.00 0.00 5.69
292 293 1.774894 TTAGGAGGTGGCTTTGCGGT 61.775 55.000 0.00 0.00 0.00 5.68
293 294 1.774894 TAGGAGGTGGCTTTGCGGTT 61.775 55.000 0.00 0.00 0.00 4.44
294 295 2.626780 GGAGGTGGCTTTGCGGTTC 61.627 63.158 0.00 0.00 0.00 3.62
295 296 2.966309 GAGGTGGCTTTGCGGTTCG 61.966 63.158 0.00 0.00 0.00 3.95
296 297 3.284449 GGTGGCTTTGCGGTTCGT 61.284 61.111 0.00 0.00 0.00 3.85
297 298 2.051345 GTGGCTTTGCGGTTCGTG 60.051 61.111 0.00 0.00 0.00 4.35
298 299 3.959975 TGGCTTTGCGGTTCGTGC 61.960 61.111 0.00 0.00 0.00 5.34
301 302 4.383602 CTTTGCGGTTCGTGCGGG 62.384 66.667 0.00 0.00 34.24 6.13
306 307 3.411351 CGGTTCGTGCGGGTCAAG 61.411 66.667 0.00 0.00 0.00 3.02
307 308 2.029964 GGTTCGTGCGGGTCAAGA 59.970 61.111 0.00 0.00 0.00 3.02
308 309 1.375523 GGTTCGTGCGGGTCAAGAT 60.376 57.895 0.00 0.00 33.34 2.40
309 310 0.953960 GGTTCGTGCGGGTCAAGATT 60.954 55.000 0.00 0.00 33.34 2.40
310 311 0.872388 GTTCGTGCGGGTCAAGATTT 59.128 50.000 0.00 0.00 33.34 2.17
311 312 1.136057 GTTCGTGCGGGTCAAGATTTC 60.136 52.381 0.00 0.00 33.34 2.17
312 313 1.011968 TCGTGCGGGTCAAGATTTCG 61.012 55.000 0.00 0.00 0.00 3.46
313 314 1.011968 CGTGCGGGTCAAGATTTCGA 61.012 55.000 0.00 0.00 0.00 3.71
314 315 1.369625 GTGCGGGTCAAGATTTCGAT 58.630 50.000 0.00 0.00 0.00 3.59
315 316 1.062587 GTGCGGGTCAAGATTTCGATG 59.937 52.381 0.00 0.00 0.00 3.84
316 317 0.028110 GCGGGTCAAGATTTCGATGC 59.972 55.000 0.00 0.00 0.00 3.91
317 318 1.656652 CGGGTCAAGATTTCGATGCT 58.343 50.000 0.00 0.00 0.00 3.79
318 319 2.821546 CGGGTCAAGATTTCGATGCTA 58.178 47.619 0.00 0.00 0.00 3.49
319 320 2.540101 CGGGTCAAGATTTCGATGCTAC 59.460 50.000 0.00 0.00 0.00 3.58
320 321 2.540101 GGGTCAAGATTTCGATGCTACG 59.460 50.000 0.00 0.00 0.00 3.51
321 322 3.187700 GGTCAAGATTTCGATGCTACGT 58.812 45.455 0.00 0.00 34.70 3.57
322 323 3.000322 GGTCAAGATTTCGATGCTACGTG 60.000 47.826 0.00 0.00 34.70 4.49
323 324 3.000322 GTCAAGATTTCGATGCTACGTGG 60.000 47.826 0.00 0.00 34.70 4.94
324 325 3.119280 TCAAGATTTCGATGCTACGTGGA 60.119 43.478 1.81 0.00 34.70 4.02
325 326 2.810650 AGATTTCGATGCTACGTGGAC 58.189 47.619 1.81 0.00 34.70 4.02
326 327 2.165641 AGATTTCGATGCTACGTGGACA 59.834 45.455 1.81 0.28 34.70 4.02
327 328 2.442212 TTTCGATGCTACGTGGACAA 57.558 45.000 1.81 0.00 34.70 3.18
328 329 1.705256 TTCGATGCTACGTGGACAAC 58.295 50.000 1.81 0.00 34.70 3.32
329 330 0.108992 TCGATGCTACGTGGACAACC 60.109 55.000 1.81 0.00 34.70 3.77
330 331 0.389296 CGATGCTACGTGGACAACCA 60.389 55.000 1.81 0.00 44.76 3.67
346 347 6.873076 TGGACAACCAAATAGATCAAAATTGC 59.127 34.615 0.00 0.00 43.91 3.56
347 348 6.873076 GGACAACCAAATAGATCAAAATTGCA 59.127 34.615 0.00 0.00 35.97 4.08
348 349 7.550196 GGACAACCAAATAGATCAAAATTGCAT 59.450 33.333 0.00 0.00 35.97 3.96
349 350 8.483307 ACAACCAAATAGATCAAAATTGCATC 57.517 30.769 0.00 0.00 0.00 3.91
350 351 8.095792 ACAACCAAATAGATCAAAATTGCATCA 58.904 29.630 0.00 0.00 0.00 3.07
351 352 8.937884 CAACCAAATAGATCAAAATTGCATCAA 58.062 29.630 0.00 0.00 0.00 2.57
352 353 8.712285 ACCAAATAGATCAAAATTGCATCAAG 57.288 30.769 0.00 0.00 0.00 3.02
353 354 7.279313 ACCAAATAGATCAAAATTGCATCAAGC 59.721 33.333 0.00 0.00 45.96 4.01
363 364 3.985877 CATCAAGCGAGGCAACCA 58.014 55.556 0.00 0.00 37.17 3.67
364 365 2.256391 CATCAAGCGAGGCAACCAA 58.744 52.632 0.00 0.00 37.17 3.67
365 366 0.597568 CATCAAGCGAGGCAACCAAA 59.402 50.000 0.00 0.00 37.17 3.28
366 367 0.598065 ATCAAGCGAGGCAACCAAAC 59.402 50.000 0.00 0.00 37.17 2.93
367 368 0.749818 TCAAGCGAGGCAACCAAACA 60.750 50.000 0.00 0.00 37.17 2.83
368 369 0.314935 CAAGCGAGGCAACCAAACAT 59.685 50.000 0.00 0.00 37.17 2.71
369 370 1.039856 AAGCGAGGCAACCAAACATT 58.960 45.000 0.00 0.00 37.17 2.71
370 371 1.039856 AGCGAGGCAACCAAACATTT 58.960 45.000 0.00 0.00 37.17 2.32
374 375 2.817258 CGAGGCAACCAAACATTTCCTA 59.183 45.455 0.00 0.00 37.17 2.94
393 394 7.584396 TTCCTAAGTTCCCCTAAGAAAGAAT 57.416 36.000 0.00 0.00 0.00 2.40
430 431 1.228521 TCGGAGACAACACGGGGTA 60.229 57.895 0.00 0.00 0.00 3.69
441 442 4.302509 CGGGGTACACACGGCACA 62.303 66.667 0.00 0.00 0.00 4.57
466 467 5.356751 TCACAACATAGTGCTGAAAGTTGTT 59.643 36.000 12.51 0.00 44.86 2.83
473 474 3.193267 AGTGCTGAAAGTTGTTGAAAGCA 59.807 39.130 0.00 0.00 36.88 3.91
475 476 3.925913 TGCTGAAAGTTGTTGAAAGCAAC 59.074 39.130 0.00 0.00 45.23 4.17
490 491 8.939201 TTGAAAGCAACTGATATTTTTGTCAA 57.061 26.923 0.00 0.00 0.00 3.18
491 492 8.578308 TGAAAGCAACTGATATTTTTGTCAAG 57.422 30.769 0.00 0.00 0.00 3.02
492 493 8.196771 TGAAAGCAACTGATATTTTTGTCAAGT 58.803 29.630 0.00 0.00 0.00 3.16
493 494 7.935338 AAGCAACTGATATTTTTGTCAAGTG 57.065 32.000 0.00 0.00 0.00 3.16
494 495 7.275888 AGCAACTGATATTTTTGTCAAGTGA 57.724 32.000 0.00 0.00 0.00 3.41
495 496 7.715657 AGCAACTGATATTTTTGTCAAGTGAA 58.284 30.769 0.00 0.00 0.00 3.18
496 497 8.196771 AGCAACTGATATTTTTGTCAAGTGAAA 58.803 29.630 0.00 0.00 0.00 2.69
497 498 8.482429 GCAACTGATATTTTTGTCAAGTGAAAG 58.518 33.333 0.00 0.00 0.00 2.62
498 499 8.971321 CAACTGATATTTTTGTCAAGTGAAAGG 58.029 33.333 0.00 0.00 0.00 3.11
499 500 7.147976 ACTGATATTTTTGTCAAGTGAAAGGC 58.852 34.615 0.00 0.00 0.00 4.35
500 501 7.048629 TGATATTTTTGTCAAGTGAAAGGCA 57.951 32.000 0.00 0.00 0.00 4.75
501 502 7.495901 TGATATTTTTGTCAAGTGAAAGGCAA 58.504 30.769 0.00 0.00 0.00 4.52
502 503 7.984050 TGATATTTTTGTCAAGTGAAAGGCAAA 59.016 29.630 0.00 0.00 0.00 3.68
503 504 5.854431 TTTTTGTCAAGTGAAAGGCAAAC 57.146 34.783 0.00 0.00 0.00 2.93
504 505 3.518634 TTGTCAAGTGAAAGGCAAACC 57.481 42.857 0.00 0.00 0.00 3.27
505 506 2.451490 TGTCAAGTGAAAGGCAAACCA 58.549 42.857 0.00 0.00 39.06 3.67
506 507 2.426738 TGTCAAGTGAAAGGCAAACCAG 59.573 45.455 0.00 0.00 39.06 4.00
507 508 1.408702 TCAAGTGAAAGGCAAACCAGC 59.591 47.619 0.00 0.00 39.06 4.85
508 509 1.410153 CAAGTGAAAGGCAAACCAGCT 59.590 47.619 0.00 0.00 39.06 4.24
509 510 1.035139 AGTGAAAGGCAAACCAGCTG 58.965 50.000 6.78 6.78 39.06 4.24
510 511 0.032540 GTGAAAGGCAAACCAGCTGG 59.967 55.000 31.60 31.60 39.06 4.85
521 522 3.376218 CCAGCTGGTATGTGAGAGC 57.624 57.895 25.53 0.00 0.00 4.09
522 523 0.179062 CCAGCTGGTATGTGAGAGCC 60.179 60.000 25.53 0.00 31.43 4.70
523 524 0.538584 CAGCTGGTATGTGAGAGCCA 59.461 55.000 5.57 0.00 31.43 4.75
524 525 1.065926 CAGCTGGTATGTGAGAGCCAA 60.066 52.381 5.57 0.00 31.43 4.52
525 526 1.842562 AGCTGGTATGTGAGAGCCAAT 59.157 47.619 0.00 0.00 31.43 3.16
526 527 3.041211 AGCTGGTATGTGAGAGCCAATA 58.959 45.455 0.00 0.00 31.43 1.90
527 528 3.455910 AGCTGGTATGTGAGAGCCAATAA 59.544 43.478 0.00 0.00 31.43 1.40
528 529 3.561725 GCTGGTATGTGAGAGCCAATAAC 59.438 47.826 0.00 0.00 0.00 1.89
529 530 4.769688 CTGGTATGTGAGAGCCAATAACA 58.230 43.478 0.00 0.00 0.00 2.41
530 531 4.513442 TGGTATGTGAGAGCCAATAACAC 58.487 43.478 0.00 0.00 0.00 3.32
531 532 4.019771 TGGTATGTGAGAGCCAATAACACA 60.020 41.667 0.00 0.00 43.70 3.72
533 534 5.237344 GGTATGTGAGAGCCAATAACACATC 59.763 44.000 13.03 6.84 45.05 3.06
534 535 3.261580 TGTGAGAGCCAATAACACATCG 58.738 45.455 0.00 0.00 36.72 3.84
535 536 2.609459 GTGAGAGCCAATAACACATCGG 59.391 50.000 0.00 0.00 0.00 4.18
536 537 1.599542 GAGAGCCAATAACACATCGGC 59.400 52.381 0.00 0.00 43.31 5.54
540 541 1.264288 GCCAATAACACATCGGCTAGC 59.736 52.381 6.04 6.04 39.73 3.42
541 542 2.560504 CCAATAACACATCGGCTAGCA 58.439 47.619 18.24 0.00 0.00 3.49
542 543 2.287915 CCAATAACACATCGGCTAGCAC 59.712 50.000 18.24 5.06 0.00 4.40
543 544 2.240493 ATAACACATCGGCTAGCACC 57.760 50.000 18.24 0.00 0.00 5.01
544 545 1.191535 TAACACATCGGCTAGCACCT 58.808 50.000 18.24 0.00 0.00 4.00
545 546 0.391661 AACACATCGGCTAGCACCTG 60.392 55.000 18.24 12.12 0.00 4.00
546 547 1.522355 CACATCGGCTAGCACCTGG 60.522 63.158 18.24 4.10 0.00 4.45
547 548 1.990060 ACATCGGCTAGCACCTGGT 60.990 57.895 18.24 4.77 0.00 4.00
587 588 1.107114 ATCGAGCAGAACGTGAGGAT 58.893 50.000 0.00 0.00 0.00 3.24
611 612 1.700955 GAGCCTATTCCCTACGGACA 58.299 55.000 0.00 0.00 38.14 4.02
617 618 3.769844 CCTATTCCCTACGGACATGCTAT 59.230 47.826 0.00 0.00 38.14 2.97
638 639 7.642669 GCTATTTGCATATGTCATACACAAGT 58.357 34.615 4.29 2.97 39.15 3.16
639 640 8.773645 GCTATTTGCATATGTCATACACAAGTA 58.226 33.333 4.29 3.88 39.15 2.24
641 642 8.737168 ATTTGCATATGTCATACACAAGTAGT 57.263 30.769 4.29 0.00 38.97 2.73
692 693 2.923854 CGATCACATTCGAGCGGC 59.076 61.111 0.00 0.00 40.95 6.53
892 902 9.710900 AAACAAGTCCAATTCATTTCTAATTCC 57.289 29.630 0.00 0.00 0.00 3.01
932 942 1.276421 CGTCCCTCACTCACTTTCCAT 59.724 52.381 0.00 0.00 0.00 3.41
947 963 4.081420 ACTTTCCATTACAGCTCGATCACT 60.081 41.667 0.00 0.00 0.00 3.41
948 964 5.127194 ACTTTCCATTACAGCTCGATCACTA 59.873 40.000 0.00 0.00 0.00 2.74
949 965 4.837896 TCCATTACAGCTCGATCACTAG 57.162 45.455 0.00 0.00 0.00 2.57
950 966 3.004839 TCCATTACAGCTCGATCACTAGC 59.995 47.826 4.02 4.02 39.08 3.42
957 973 1.610363 CTCGATCACTAGCTAGCCCA 58.390 55.000 20.91 5.02 0.00 5.36
964 980 2.558795 TCACTAGCTAGCCCATTCGATC 59.441 50.000 20.91 0.00 0.00 3.69
965 981 2.297315 CACTAGCTAGCCCATTCGATCA 59.703 50.000 20.91 0.00 0.00 2.92
967 983 2.758736 AGCTAGCCCATTCGATCATC 57.241 50.000 12.13 0.00 0.00 2.92
969 985 2.028294 AGCTAGCCCATTCGATCATCTG 60.028 50.000 12.13 0.00 0.00 2.90
970 986 2.289320 GCTAGCCCATTCGATCATCTGT 60.289 50.000 2.29 0.00 0.00 3.41
972 988 2.569059 AGCCCATTCGATCATCTGTTG 58.431 47.619 0.00 0.00 0.00 3.33
974 990 3.134623 AGCCCATTCGATCATCTGTTGTA 59.865 43.478 0.00 0.00 0.00 2.41
975 991 3.496130 GCCCATTCGATCATCTGTTGTAG 59.504 47.826 0.00 0.00 0.00 2.74
981 997 3.195610 TCGATCATCTGTTGTAGCCTTGT 59.804 43.478 0.00 0.00 0.00 3.16
1009 1026 2.436646 CGTTCGCAATGGCCTCCT 60.437 61.111 3.32 0.00 36.38 3.69
1010 1027 2.464459 CGTTCGCAATGGCCTCCTC 61.464 63.158 3.32 0.00 36.38 3.71
1011 1028 2.115291 GTTCGCAATGGCCTCCTCC 61.115 63.158 3.32 0.00 36.38 4.30
1203 1220 1.111116 TCTTCCTCACCGTGTTCCGT 61.111 55.000 0.00 0.00 33.66 4.69
1632 1670 3.133437 GGACATGGAGATCCGAGGA 57.867 57.895 0.00 0.00 39.43 3.71
1665 1703 1.135139 GACCACGCTAAGCTCTGATCA 59.865 52.381 0.00 0.00 0.00 2.92
1696 1740 1.135546 TGTTCGTTTTATGGCATGCCG 60.136 47.619 30.87 17.19 39.42 5.69
1697 1741 0.179150 TTCGTTTTATGGCATGCCGC 60.179 50.000 30.87 15.04 39.42 6.53
1698 1742 1.138459 CGTTTTATGGCATGCCGCA 59.862 52.632 30.87 18.63 45.17 5.69
1699 1743 0.248990 CGTTTTATGGCATGCCGCAT 60.249 50.000 30.87 21.82 45.17 4.73
1700 1744 1.210870 GTTTTATGGCATGCCGCATG 58.789 50.000 30.87 26.13 45.17 4.06
1701 1745 1.109609 TTTTATGGCATGCCGCATGA 58.890 45.000 32.83 16.22 43.81 3.07
1710 1754 2.202987 GCCGCATGACAGGGAGAG 60.203 66.667 0.00 0.00 0.00 3.20
1748 1792 5.985530 TCTCGAGTTTCTTATATGGTGCATG 59.014 40.000 13.13 0.00 0.00 4.06
1749 1793 5.056480 TCGAGTTTCTTATATGGTGCATGG 58.944 41.667 0.00 0.00 0.00 3.66
1750 1794 4.319766 CGAGTTTCTTATATGGTGCATGGC 60.320 45.833 0.00 0.00 0.00 4.40
1784 1828 6.170506 ACTTGATCCTCTCTATACTCTAGCG 58.829 44.000 0.00 0.00 0.00 4.26
1785 1829 5.748670 TGATCCTCTCTATACTCTAGCGT 57.251 43.478 0.00 0.00 0.00 5.07
1786 1830 6.116711 TGATCCTCTCTATACTCTAGCGTT 57.883 41.667 0.00 0.00 0.00 4.84
1787 1831 5.935206 TGATCCTCTCTATACTCTAGCGTTG 59.065 44.000 0.00 0.00 0.00 4.10
1788 1832 5.548181 TCCTCTCTATACTCTAGCGTTGA 57.452 43.478 0.00 0.00 0.00 3.18
1789 1833 6.116711 TCCTCTCTATACTCTAGCGTTGAT 57.883 41.667 0.00 0.00 0.00 2.57
1790 1834 5.935206 TCCTCTCTATACTCTAGCGTTGATG 59.065 44.000 0.00 0.00 0.00 3.07
1791 1835 5.935206 CCTCTCTATACTCTAGCGTTGATGA 59.065 44.000 0.00 0.00 0.00 2.92
1792 1836 6.428465 CCTCTCTATACTCTAGCGTTGATGAA 59.572 42.308 0.00 0.00 0.00 2.57
1793 1837 7.120579 CCTCTCTATACTCTAGCGTTGATGAAT 59.879 40.741 0.00 0.00 0.00 2.57
1794 1838 8.397575 TCTCTATACTCTAGCGTTGATGAATT 57.602 34.615 0.00 0.00 0.00 2.17
1795 1839 8.293157 TCTCTATACTCTAGCGTTGATGAATTG 58.707 37.037 0.00 0.00 0.00 2.32
1796 1840 5.914085 ATACTCTAGCGTTGATGAATTGC 57.086 39.130 0.00 0.00 0.00 3.56
1797 1841 3.866651 ACTCTAGCGTTGATGAATTGCT 58.133 40.909 0.82 0.82 39.59 3.91
1798 1842 3.868077 ACTCTAGCGTTGATGAATTGCTC 59.132 43.478 0.00 0.00 37.12 4.26
1799 1843 4.118410 CTCTAGCGTTGATGAATTGCTCT 58.882 43.478 0.00 0.00 37.12 4.09
1800 1844 4.507710 TCTAGCGTTGATGAATTGCTCTT 58.492 39.130 0.00 0.00 37.12 2.85
1801 1845 5.660460 TCTAGCGTTGATGAATTGCTCTTA 58.340 37.500 0.00 0.00 37.12 2.10
1802 1846 6.283694 TCTAGCGTTGATGAATTGCTCTTAT 58.716 36.000 0.00 0.00 37.12 1.73
1803 1847 5.165911 AGCGTTGATGAATTGCTCTTATG 57.834 39.130 0.00 0.00 0.00 1.90
1804 1848 4.637534 AGCGTTGATGAATTGCTCTTATGT 59.362 37.500 0.00 0.00 0.00 2.29
1805 1849 4.966366 GCGTTGATGAATTGCTCTTATGTC 59.034 41.667 0.00 0.00 0.00 3.06
1806 1850 5.220739 GCGTTGATGAATTGCTCTTATGTCT 60.221 40.000 0.00 0.00 0.00 3.41
1807 1851 6.676456 GCGTTGATGAATTGCTCTTATGTCTT 60.676 38.462 0.00 0.00 0.00 3.01
1808 1852 6.685828 CGTTGATGAATTGCTCTTATGTCTTG 59.314 38.462 0.00 0.00 0.00 3.02
1809 1853 6.688637 TGATGAATTGCTCTTATGTCTTGG 57.311 37.500 0.00 0.00 0.00 3.61
1810 1854 6.182627 TGATGAATTGCTCTTATGTCTTGGT 58.817 36.000 0.00 0.00 0.00 3.67
1811 1855 6.317140 TGATGAATTGCTCTTATGTCTTGGTC 59.683 38.462 0.00 0.00 0.00 4.02
1812 1856 5.809001 TGAATTGCTCTTATGTCTTGGTCT 58.191 37.500 0.00 0.00 0.00 3.85
1813 1857 5.877012 TGAATTGCTCTTATGTCTTGGTCTC 59.123 40.000 0.00 0.00 0.00 3.36
1814 1858 5.690464 ATTGCTCTTATGTCTTGGTCTCT 57.310 39.130 0.00 0.00 0.00 3.10
1815 1859 5.489792 TTGCTCTTATGTCTTGGTCTCTT 57.510 39.130 0.00 0.00 0.00 2.85
1816 1860 5.078411 TGCTCTTATGTCTTGGTCTCTTC 57.922 43.478 0.00 0.00 0.00 2.87
1817 1861 4.109050 GCTCTTATGTCTTGGTCTCTTCG 58.891 47.826 0.00 0.00 0.00 3.79
1818 1862 4.381079 GCTCTTATGTCTTGGTCTCTTCGT 60.381 45.833 0.00 0.00 0.00 3.85
1819 1863 5.060662 TCTTATGTCTTGGTCTCTTCGTG 57.939 43.478 0.00 0.00 0.00 4.35
1820 1864 4.523173 TCTTATGTCTTGGTCTCTTCGTGT 59.477 41.667 0.00 0.00 0.00 4.49
1821 1865 5.708697 TCTTATGTCTTGGTCTCTTCGTGTA 59.291 40.000 0.00 0.00 0.00 2.90
1822 1866 6.377429 TCTTATGTCTTGGTCTCTTCGTGTAT 59.623 38.462 0.00 0.00 0.00 2.29
1823 1867 7.555195 TCTTATGTCTTGGTCTCTTCGTGTATA 59.445 37.037 0.00 0.00 0.00 1.47
1824 1868 5.562506 TGTCTTGGTCTCTTCGTGTATAG 57.437 43.478 0.00 0.00 0.00 1.31
1825 1869 5.250982 TGTCTTGGTCTCTTCGTGTATAGA 58.749 41.667 0.00 0.00 0.00 1.98
1826 1870 5.354513 TGTCTTGGTCTCTTCGTGTATAGAG 59.645 44.000 0.00 0.00 39.38 2.43
1827 1871 4.882427 TCTTGGTCTCTTCGTGTATAGAGG 59.118 45.833 0.00 0.00 38.70 3.69
1828 1872 4.498894 TGGTCTCTTCGTGTATAGAGGA 57.501 45.455 0.00 0.00 38.70 3.71
1829 1873 4.851843 TGGTCTCTTCGTGTATAGAGGAA 58.148 43.478 5.09 5.09 38.70 3.36
1830 1874 5.258841 TGGTCTCTTCGTGTATAGAGGAAA 58.741 41.667 6.49 0.00 38.70 3.13
1831 1875 5.125097 TGGTCTCTTCGTGTATAGAGGAAAC 59.875 44.000 6.49 2.81 38.70 2.78
1832 1876 5.125097 GGTCTCTTCGTGTATAGAGGAAACA 59.875 44.000 6.49 0.00 38.70 2.83
1833 1877 6.259638 GTCTCTTCGTGTATAGAGGAAACAG 58.740 44.000 6.49 5.82 38.70 3.16
1834 1878 5.357314 TCTCTTCGTGTATAGAGGAAACAGG 59.643 44.000 6.49 0.00 38.70 4.00
1835 1879 5.014858 TCTTCGTGTATAGAGGAAACAGGT 58.985 41.667 6.49 0.00 32.39 4.00
1836 1880 5.479375 TCTTCGTGTATAGAGGAAACAGGTT 59.521 40.000 6.49 0.00 32.39 3.50
1837 1881 5.733620 TCGTGTATAGAGGAAACAGGTTT 57.266 39.130 0.00 0.00 35.14 3.27
1838 1882 6.105397 TCGTGTATAGAGGAAACAGGTTTT 57.895 37.500 0.00 0.00 32.11 2.43
1839 1883 7.230849 TCGTGTATAGAGGAAACAGGTTTTA 57.769 36.000 0.00 0.00 32.11 1.52
1840 1884 7.844009 TCGTGTATAGAGGAAACAGGTTTTAT 58.156 34.615 0.00 0.00 32.11 1.40
1841 1885 8.316214 TCGTGTATAGAGGAAACAGGTTTTATT 58.684 33.333 0.00 0.00 32.11 1.40
1842 1886 8.943002 CGTGTATAGAGGAAACAGGTTTTATTT 58.057 33.333 0.00 0.00 32.11 1.40
1874 1918 8.667076 ATTTTCCAAGGAAAGAAACAGATTTG 57.333 30.769 13.47 0.00 43.75 2.32
1875 1919 6.790232 TTCCAAGGAAAGAAACAGATTTGT 57.210 33.333 0.00 0.00 39.87 2.83
1876 1920 7.619965 TTTCCAAGGAAAGAAACAGATTTGTT 58.380 30.769 10.12 0.00 42.48 2.83
1877 1921 6.805713 TCCAAGGAAAGAAACAGATTTGTTC 58.194 36.000 1.57 0.00 46.54 3.18
1878 1922 6.379703 TCCAAGGAAAGAAACAGATTTGTTCA 59.620 34.615 1.57 0.00 46.54 3.18
1879 1923 6.476706 CCAAGGAAAGAAACAGATTTGTTCAC 59.523 38.462 1.57 0.79 46.54 3.18
1880 1924 7.260603 CAAGGAAAGAAACAGATTTGTTCACT 58.739 34.615 1.57 3.01 46.54 3.41
1881 1925 8.405531 CAAGGAAAGAAACAGATTTGTTCACTA 58.594 33.333 1.57 0.00 46.54 2.74
1882 1926 8.159344 AGGAAAGAAACAGATTTGTTCACTAG 57.841 34.615 1.57 0.00 46.54 2.57
1883 1927 7.775561 AGGAAAGAAACAGATTTGTTCACTAGT 59.224 33.333 1.57 0.00 46.54 2.57
1884 1928 9.052759 GGAAAGAAACAGATTTGTTCACTAGTA 57.947 33.333 1.57 0.00 46.54 1.82
1885 1929 9.865484 GAAAGAAACAGATTTGTTCACTAGTAC 57.135 33.333 1.57 0.00 46.54 2.73
1886 1930 9.614792 AAAGAAACAGATTTGTTCACTAGTACT 57.385 29.630 1.57 0.00 46.54 2.73
1887 1931 8.594881 AGAAACAGATTTGTTCACTAGTACTG 57.405 34.615 5.39 0.00 46.54 2.74
1888 1932 8.421784 AGAAACAGATTTGTTCACTAGTACTGA 58.578 33.333 5.39 0.00 46.54 3.41
1889 1933 9.209175 GAAACAGATTTGTTCACTAGTACTGAT 57.791 33.333 5.39 0.00 46.54 2.90
1890 1934 8.539770 AACAGATTTGTTCACTAGTACTGATG 57.460 34.615 5.39 3.69 44.00 3.07
1891 1935 7.671302 ACAGATTTGTTCACTAGTACTGATGT 58.329 34.615 5.39 0.00 32.28 3.06
1892 1936 7.600375 ACAGATTTGTTCACTAGTACTGATGTG 59.400 37.037 5.39 11.69 32.28 3.21
1893 1937 7.600375 CAGATTTGTTCACTAGTACTGATGTGT 59.400 37.037 18.35 4.32 0.00 3.72
1894 1938 8.150945 AGATTTGTTCACTAGTACTGATGTGTT 58.849 33.333 18.35 5.33 0.00 3.32
1895 1939 8.677148 ATTTGTTCACTAGTACTGATGTGTTT 57.323 30.769 18.35 3.90 0.00 2.83
1896 1940 8.500753 TTTGTTCACTAGTACTGATGTGTTTT 57.499 30.769 18.35 0.00 0.00 2.43
1897 1941 7.477144 TGTTCACTAGTACTGATGTGTTTTG 57.523 36.000 18.35 1.74 0.00 2.44
1898 1942 7.045416 TGTTCACTAGTACTGATGTGTTTTGT 58.955 34.615 18.35 0.00 0.00 2.83
1899 1943 7.551262 TGTTCACTAGTACTGATGTGTTTTGTT 59.449 33.333 18.35 0.00 0.00 2.83
1900 1944 7.477144 TCACTAGTACTGATGTGTTTTGTTG 57.523 36.000 18.35 0.21 0.00 3.33
1901 1945 7.045416 TCACTAGTACTGATGTGTTTTGTTGT 58.955 34.615 18.35 0.00 0.00 3.32
1902 1946 8.198778 TCACTAGTACTGATGTGTTTTGTTGTA 58.801 33.333 18.35 1.87 0.00 2.41
1903 1947 8.822855 CACTAGTACTGATGTGTTTTGTTGTAA 58.177 33.333 5.39 0.00 0.00 2.41
1904 1948 9.386010 ACTAGTACTGATGTGTTTTGTTGTAAA 57.614 29.630 5.39 0.00 0.00 2.01
1907 1951 6.885735 ACTGATGTGTTTTGTTGTAAAAGC 57.114 33.333 0.00 0.00 0.00 3.51
1908 1952 6.630071 ACTGATGTGTTTTGTTGTAAAAGCT 58.370 32.000 0.00 0.00 0.00 3.74
1921 1965 9.515020 TTGTTGTAAAAGCTTTTAGTTGATCAG 57.485 29.630 27.79 0.00 33.66 2.90
1968 2012 1.472480 GGCAGCTCGCTATTTTTGGAA 59.528 47.619 7.85 0.00 41.91 3.53
1977 2021 6.417930 GCTCGCTATTTTTGGAATATTTGGAC 59.582 38.462 0.00 0.00 0.00 4.02
2016 2060 5.832595 TCCAGAAATCATGGTTTTCAGAACA 59.167 36.000 5.21 0.00 39.01 3.18
2029 2074 1.469703 TCAGAACATTGATGCGCTTGG 59.530 47.619 9.73 0.00 0.00 3.61
2096 2142 7.914346 CCTAACAACGTGGTTTGTTTTAATACA 59.086 33.333 14.73 0.00 45.45 2.29
2138 2184 9.046296 TGTAAGATGTTTTGAGAAAGAAGTCTC 57.954 33.333 0.00 0.00 43.75 3.36
2142 2188 5.661458 TGTTTTGAGAAAGAAGTCTCGACT 58.339 37.500 0.00 0.00 46.00 4.18
2192 2239 7.654022 AAACTGTGATTTTTAGAGGGAAACA 57.346 32.000 0.00 0.00 0.00 2.83
2202 2249 2.711542 AGAGGGAAACATTAACTGGCG 58.288 47.619 0.00 0.00 0.00 5.69
2209 2256 0.390735 ACATTAACTGGCGACCGTCC 60.391 55.000 0.00 0.00 0.00 4.79
2229 2276 1.023513 GCCAGCAGAGATTTCGCAGT 61.024 55.000 0.00 0.00 0.00 4.40
2268 2315 4.748679 CGCCGCTGCTGTTTGCTC 62.749 66.667 0.00 0.00 43.37 4.26
2269 2316 4.410743 GCCGCTGCTGTTTGCTCC 62.411 66.667 0.00 0.00 43.37 4.70
2294 2341 1.410882 GAGCTTGAAGACCGCTCCTAT 59.589 52.381 0.00 0.00 43.22 2.57
2327 2382 1.945354 CTACCTGCCATCGTGGTCGT 61.945 60.000 6.02 3.27 40.46 4.34
2333 2388 1.226323 CCATCGTGGTCGTCGTCTC 60.226 63.158 0.00 0.00 38.33 3.36
2335 2390 1.673337 ATCGTGGTCGTCGTCTCCA 60.673 57.895 0.00 0.00 38.33 3.86
2336 2391 1.645704 ATCGTGGTCGTCGTCTCCAG 61.646 60.000 6.76 3.49 38.33 3.86
2337 2392 2.614446 CGTGGTCGTCGTCTCCAGT 61.614 63.158 6.76 0.00 31.54 4.00
2365 2420 2.279784 GCCTCCTCGCCTTGATCG 60.280 66.667 0.00 0.00 0.00 3.69
2413 2480 2.658593 GCACGTCACTGTCTGCGT 60.659 61.111 0.00 0.00 34.33 5.24
2443 2543 0.476771 TCCACCTCTCCCAAAACCAC 59.523 55.000 0.00 0.00 0.00 4.16
2457 2557 8.117813 TCCCAAAACCACATATAGTTTCTTTC 57.882 34.615 0.00 0.00 35.19 2.62
2475 2577 4.810491 TCTTTCTTTTTGAAATGGCAGTGC 59.190 37.500 6.55 6.55 42.96 4.40
2497 2599 4.273480 GCACATTTGCCGACATCTTACTAT 59.727 41.667 0.00 0.00 43.66 2.12
2498 2600 5.220854 GCACATTTGCCGACATCTTACTATT 60.221 40.000 0.00 0.00 43.66 1.73
2542 2644 9.797642 AGATATTAGTGCATCATTGACCATTTA 57.202 29.630 0.00 0.00 0.00 1.40
2550 2652 5.235616 GCATCATTGACCATTTAGGCAATTG 59.764 40.000 0.00 0.00 40.08 2.32
2554 2656 7.222872 TCATTGACCATTTAGGCAATTGTTTT 58.777 30.769 7.40 0.00 40.08 2.43
2568 2670 5.789512 GCAATTGTTTTGATACATTTTGCCG 59.210 36.000 7.40 0.00 39.31 5.69
2649 2998 7.148188 TGGCATTTTTGTTACATTCTTGCAAAA 60.148 29.630 0.00 0.00 37.29 2.44
2654 3003 9.483062 TTTTTGTTACATTCTTGCAAAATTTCG 57.517 25.926 0.00 0.00 38.35 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.905591 AGGGTAGTACCACTTAGTGCAAA 59.094 43.478 20.97 0.00 41.02 3.68
1 2 3.512724 GAGGGTAGTACCACTTAGTGCAA 59.487 47.826 20.97 0.00 41.02 4.08
2 3 3.094572 GAGGGTAGTACCACTTAGTGCA 58.905 50.000 20.97 0.00 41.02 4.57
3 4 3.130693 CAGAGGGTAGTACCACTTAGTGC 59.869 52.174 20.97 0.93 41.02 4.40
4 5 3.700038 CCAGAGGGTAGTACCACTTAGTG 59.300 52.174 20.97 5.22 41.02 2.74
5 6 3.595138 TCCAGAGGGTAGTACCACTTAGT 59.405 47.826 20.97 2.96 41.02 2.24
7 8 3.854389 TCTCCAGAGGGTAGTACCACTTA 59.146 47.826 20.97 8.83 41.02 2.24
8 9 2.653366 TCTCCAGAGGGTAGTACCACTT 59.347 50.000 20.97 5.84 41.02 3.16
9 10 2.242708 CTCTCCAGAGGGTAGTACCACT 59.757 54.545 20.97 15.45 41.02 4.00
11 12 1.063867 GCTCTCCAGAGGGTAGTACCA 60.064 57.143 20.97 0.00 41.02 3.25
12 13 1.063867 TGCTCTCCAGAGGGTAGTACC 60.064 57.143 11.20 11.20 42.29 3.34
13 14 2.025898 GTGCTCTCCAGAGGGTAGTAC 58.974 57.143 5.74 0.00 42.29 2.73
14 15 1.923850 AGTGCTCTCCAGAGGGTAGTA 59.076 52.381 5.74 0.00 42.29 1.82
15 16 0.707616 AGTGCTCTCCAGAGGGTAGT 59.292 55.000 5.74 0.00 42.29 2.73
16 17 2.092103 AGTAGTGCTCTCCAGAGGGTAG 60.092 54.545 5.74 0.00 42.29 3.18
17 18 1.923850 AGTAGTGCTCTCCAGAGGGTA 59.076 52.381 5.74 0.00 42.29 3.69
18 19 0.707616 AGTAGTGCTCTCCAGAGGGT 59.292 55.000 5.74 0.00 42.29 4.34
19 20 2.303175 GTAGTAGTGCTCTCCAGAGGG 58.697 57.143 5.74 0.00 42.29 4.30
20 21 2.303175 GGTAGTAGTGCTCTCCAGAGG 58.697 57.143 5.74 0.00 42.29 3.69
21 22 1.944024 CGGTAGTAGTGCTCTCCAGAG 59.056 57.143 0.00 0.00 44.75 3.35
22 23 1.281287 ACGGTAGTAGTGCTCTCCAGA 59.719 52.381 0.00 0.00 0.00 3.86
23 24 1.752683 ACGGTAGTAGTGCTCTCCAG 58.247 55.000 0.00 0.00 0.00 3.86
24 25 1.816835 CAACGGTAGTAGTGCTCTCCA 59.183 52.381 0.00 0.00 0.00 3.86
25 26 1.817447 ACAACGGTAGTAGTGCTCTCC 59.183 52.381 0.00 0.00 0.00 3.71
26 27 3.500014 GAACAACGGTAGTAGTGCTCTC 58.500 50.000 0.00 0.00 0.00 3.20
27 28 2.230750 GGAACAACGGTAGTAGTGCTCT 59.769 50.000 0.00 0.00 0.00 4.09
28 29 2.029649 TGGAACAACGGTAGTAGTGCTC 60.030 50.000 0.00 0.00 31.92 4.26
29 30 1.965643 TGGAACAACGGTAGTAGTGCT 59.034 47.619 0.00 0.00 31.92 4.40
30 31 2.443887 TGGAACAACGGTAGTAGTGC 57.556 50.000 0.00 0.00 31.92 4.40
44 45 2.350772 CGGAGTGCAGTTTGAATGGAAC 60.351 50.000 0.00 0.00 0.00 3.62
45 46 1.879380 CGGAGTGCAGTTTGAATGGAA 59.121 47.619 0.00 0.00 0.00 3.53
46 47 1.071542 TCGGAGTGCAGTTTGAATGGA 59.928 47.619 0.00 0.00 0.00 3.41
47 48 1.522668 TCGGAGTGCAGTTTGAATGG 58.477 50.000 0.00 0.00 0.00 3.16
48 49 2.095567 CCTTCGGAGTGCAGTTTGAATG 60.096 50.000 9.12 4.46 0.00 2.67
49 50 2.154462 CCTTCGGAGTGCAGTTTGAAT 58.846 47.619 9.12 0.00 0.00 2.57
50 51 1.593196 CCTTCGGAGTGCAGTTTGAA 58.407 50.000 0.00 2.41 0.00 2.69
51 52 0.250295 CCCTTCGGAGTGCAGTTTGA 60.250 55.000 0.00 0.00 0.00 2.69
52 53 1.856265 GCCCTTCGGAGTGCAGTTTG 61.856 60.000 0.00 0.00 0.00 2.93
53 54 1.600916 GCCCTTCGGAGTGCAGTTT 60.601 57.895 0.00 0.00 0.00 2.66
54 55 1.192146 TAGCCCTTCGGAGTGCAGTT 61.192 55.000 0.00 0.00 0.00 3.16
55 56 1.192146 TTAGCCCTTCGGAGTGCAGT 61.192 55.000 0.00 0.00 0.00 4.40
56 57 0.460987 CTTAGCCCTTCGGAGTGCAG 60.461 60.000 0.00 0.00 0.00 4.41
57 58 1.596934 CTTAGCCCTTCGGAGTGCA 59.403 57.895 0.00 0.00 0.00 4.57
58 59 1.815840 GCTTAGCCCTTCGGAGTGC 60.816 63.158 0.00 0.00 0.00 4.40
59 60 1.112113 TAGCTTAGCCCTTCGGAGTG 58.888 55.000 0.00 0.00 0.00 3.51
60 61 2.089600 ATAGCTTAGCCCTTCGGAGT 57.910 50.000 0.00 0.00 0.00 3.85
61 62 2.231721 GGTATAGCTTAGCCCTTCGGAG 59.768 54.545 0.00 0.00 0.00 4.63
62 63 2.245582 GGTATAGCTTAGCCCTTCGGA 58.754 52.381 0.00 0.00 0.00 4.55
63 64 1.968493 TGGTATAGCTTAGCCCTTCGG 59.032 52.381 0.00 0.00 0.00 4.30
64 65 2.628657 AGTGGTATAGCTTAGCCCTTCG 59.371 50.000 0.00 0.00 0.00 3.79
65 66 3.804063 GCAGTGGTATAGCTTAGCCCTTC 60.804 52.174 0.00 0.00 0.00 3.46
66 67 2.104963 GCAGTGGTATAGCTTAGCCCTT 59.895 50.000 0.00 0.00 0.00 3.95
67 68 1.694696 GCAGTGGTATAGCTTAGCCCT 59.305 52.381 0.00 0.00 0.00 5.19
68 69 1.416401 TGCAGTGGTATAGCTTAGCCC 59.584 52.381 0.00 0.00 0.00 5.19
69 70 2.910688 TGCAGTGGTATAGCTTAGCC 57.089 50.000 0.00 0.00 0.00 3.93
70 71 4.220821 TCCTATGCAGTGGTATAGCTTAGC 59.779 45.833 0.00 0.00 38.10 3.09
71 72 5.336849 GGTCCTATGCAGTGGTATAGCTTAG 60.337 48.000 3.20 0.00 38.10 2.18
72 73 4.527038 GGTCCTATGCAGTGGTATAGCTTA 59.473 45.833 3.20 0.00 38.10 3.09
73 74 3.325135 GGTCCTATGCAGTGGTATAGCTT 59.675 47.826 3.20 0.00 38.10 3.74
74 75 2.900546 GGTCCTATGCAGTGGTATAGCT 59.099 50.000 3.20 0.00 38.10 3.32
75 76 2.900546 AGGTCCTATGCAGTGGTATAGC 59.099 50.000 7.52 0.00 38.10 2.97
76 77 4.588951 TCAAGGTCCTATGCAGTGGTATAG 59.411 45.833 7.52 0.00 38.86 1.31
77 78 4.552674 TCAAGGTCCTATGCAGTGGTATA 58.447 43.478 7.52 0.00 0.00 1.47
78 79 3.384168 TCAAGGTCCTATGCAGTGGTAT 58.616 45.455 7.52 0.00 0.00 2.73
79 80 2.827755 TCAAGGTCCTATGCAGTGGTA 58.172 47.619 7.52 0.00 0.00 3.25
80 81 1.656587 TCAAGGTCCTATGCAGTGGT 58.343 50.000 7.52 0.00 0.00 4.16
81 82 3.389329 ACTATCAAGGTCCTATGCAGTGG 59.611 47.826 0.00 0.00 0.00 4.00
82 83 4.679373 ACTATCAAGGTCCTATGCAGTG 57.321 45.455 0.00 0.00 0.00 3.66
83 84 4.589374 GGTACTATCAAGGTCCTATGCAGT 59.411 45.833 0.00 0.00 0.00 4.40
84 85 4.588951 TGGTACTATCAAGGTCCTATGCAG 59.411 45.833 0.00 0.00 0.00 4.41
85 86 4.344102 GTGGTACTATCAAGGTCCTATGCA 59.656 45.833 0.00 0.00 0.00 3.96
86 87 4.262506 GGTGGTACTATCAAGGTCCTATGC 60.263 50.000 0.00 0.00 0.00 3.14
87 88 4.283722 GGGTGGTACTATCAAGGTCCTATG 59.716 50.000 0.00 0.00 0.00 2.23
88 89 4.172241 AGGGTGGTACTATCAAGGTCCTAT 59.828 45.833 0.00 0.00 0.00 2.57
89 90 3.534747 AGGGTGGTACTATCAAGGTCCTA 59.465 47.826 0.00 0.00 0.00 2.94
90 91 2.318207 AGGGTGGTACTATCAAGGTCCT 59.682 50.000 0.00 0.00 0.00 3.85
91 92 2.760581 AGGGTGGTACTATCAAGGTCC 58.239 52.381 0.00 0.00 0.00 4.46
92 93 6.781507 AGTATTAGGGTGGTACTATCAAGGTC 59.218 42.308 0.00 0.00 0.00 3.85
93 94 6.553852 CAGTATTAGGGTGGTACTATCAAGGT 59.446 42.308 0.00 0.00 0.00 3.50
94 95 6.553852 ACAGTATTAGGGTGGTACTATCAAGG 59.446 42.308 0.00 0.00 0.00 3.61
95 96 7.598759 ACAGTATTAGGGTGGTACTATCAAG 57.401 40.000 0.00 0.00 0.00 3.02
96 97 7.727186 CCTACAGTATTAGGGTGGTACTATCAA 59.273 40.741 0.00 0.00 35.78 2.57
97 98 7.236529 CCTACAGTATTAGGGTGGTACTATCA 58.763 42.308 0.00 0.00 35.78 2.15
98 99 6.152492 GCCTACAGTATTAGGGTGGTACTATC 59.848 46.154 0.00 0.00 39.39 2.08
99 100 6.015282 GCCTACAGTATTAGGGTGGTACTAT 58.985 44.000 0.00 0.00 39.39 2.12
100 101 5.103558 TGCCTACAGTATTAGGGTGGTACTA 60.104 44.000 0.00 0.00 39.39 1.82
101 102 4.221530 GCCTACAGTATTAGGGTGGTACT 58.778 47.826 0.00 0.00 39.39 2.73
102 103 3.962718 TGCCTACAGTATTAGGGTGGTAC 59.037 47.826 0.00 0.00 39.39 3.34
103 104 4.268828 TGCCTACAGTATTAGGGTGGTA 57.731 45.455 0.00 0.00 39.39 3.25
104 105 3.124856 TGCCTACAGTATTAGGGTGGT 57.875 47.619 0.00 0.00 39.39 4.16
105 106 4.497291 TTTGCCTACAGTATTAGGGTGG 57.503 45.455 0.00 0.00 39.39 4.61
106 107 5.250200 TGTTTTGCCTACAGTATTAGGGTG 58.750 41.667 0.00 0.00 39.39 4.61
107 108 5.249852 TCTGTTTTGCCTACAGTATTAGGGT 59.750 40.000 9.04 0.00 42.77 4.34
108 109 5.741011 TCTGTTTTGCCTACAGTATTAGGG 58.259 41.667 9.04 0.00 42.77 3.53
109 110 5.817816 CCTCTGTTTTGCCTACAGTATTAGG 59.182 44.000 9.04 5.79 42.77 2.69
110 111 5.817816 CCCTCTGTTTTGCCTACAGTATTAG 59.182 44.000 9.04 1.59 42.77 1.73
111 112 5.486063 TCCCTCTGTTTTGCCTACAGTATTA 59.514 40.000 9.04 0.00 42.77 0.98
112 113 4.288626 TCCCTCTGTTTTGCCTACAGTATT 59.711 41.667 9.04 0.00 42.77 1.89
113 114 3.844211 TCCCTCTGTTTTGCCTACAGTAT 59.156 43.478 9.04 0.00 42.77 2.12
114 115 3.244582 TCCCTCTGTTTTGCCTACAGTA 58.755 45.455 9.04 0.00 42.77 2.74
115 116 2.054799 TCCCTCTGTTTTGCCTACAGT 58.945 47.619 9.04 0.00 42.77 3.55
116 117 2.859165 TCCCTCTGTTTTGCCTACAG 57.141 50.000 0.00 0.00 43.41 2.74
117 118 3.073798 TCATTCCCTCTGTTTTGCCTACA 59.926 43.478 0.00 0.00 0.00 2.74
118 119 3.686016 TCATTCCCTCTGTTTTGCCTAC 58.314 45.455 0.00 0.00 0.00 3.18
119 120 4.079253 GTTCATTCCCTCTGTTTTGCCTA 58.921 43.478 0.00 0.00 0.00 3.93
120 121 2.893489 GTTCATTCCCTCTGTTTTGCCT 59.107 45.455 0.00 0.00 0.00 4.75
121 122 2.029020 GGTTCATTCCCTCTGTTTTGCC 60.029 50.000 0.00 0.00 0.00 4.52
122 123 2.627699 TGGTTCATTCCCTCTGTTTTGC 59.372 45.455 0.00 0.00 0.00 3.68
123 124 5.473066 AATGGTTCATTCCCTCTGTTTTG 57.527 39.130 0.00 0.00 26.27 2.44
124 125 5.366477 ACAAATGGTTCATTCCCTCTGTTTT 59.634 36.000 0.00 0.00 32.43 2.43
125 126 4.901250 ACAAATGGTTCATTCCCTCTGTTT 59.099 37.500 0.00 0.00 32.43 2.83
126 127 4.281688 CACAAATGGTTCATTCCCTCTGTT 59.718 41.667 0.00 0.00 32.43 3.16
127 128 3.828451 CACAAATGGTTCATTCCCTCTGT 59.172 43.478 0.00 0.00 32.43 3.41
128 129 4.081406 TCACAAATGGTTCATTCCCTCTG 58.919 43.478 0.00 0.00 32.43 3.35
129 130 4.387026 TCACAAATGGTTCATTCCCTCT 57.613 40.909 0.00 0.00 32.43 3.69
130 131 5.888161 ACTATCACAAATGGTTCATTCCCTC 59.112 40.000 0.00 0.00 32.43 4.30
131 132 5.831103 ACTATCACAAATGGTTCATTCCCT 58.169 37.500 0.00 0.00 32.43 4.20
132 133 6.152661 TGAACTATCACAAATGGTTCATTCCC 59.847 38.462 11.44 0.00 40.47 3.97
133 134 7.156876 TGAACTATCACAAATGGTTCATTCC 57.843 36.000 11.44 0.00 40.47 3.01
160 161 2.249844 AACTACCGGACCAAGTGTTG 57.750 50.000 9.46 0.00 0.00 3.33
161 162 2.804212 CGAAACTACCGGACCAAGTGTT 60.804 50.000 9.46 3.77 0.00 3.32
162 163 1.269936 CGAAACTACCGGACCAAGTGT 60.270 52.381 9.46 0.29 0.00 3.55
163 164 1.425412 CGAAACTACCGGACCAAGTG 58.575 55.000 9.46 0.00 0.00 3.16
164 165 0.320160 GCGAAACTACCGGACCAAGT 60.320 55.000 9.46 2.73 0.00 3.16
165 166 0.037605 AGCGAAACTACCGGACCAAG 60.038 55.000 9.46 2.00 0.00 3.61
166 167 0.037975 GAGCGAAACTACCGGACCAA 60.038 55.000 9.46 0.00 0.00 3.67
167 168 1.588082 GAGCGAAACTACCGGACCA 59.412 57.895 9.46 0.00 0.00 4.02
168 169 1.153686 GGAGCGAAACTACCGGACC 60.154 63.158 9.46 0.00 0.00 4.46
169 170 1.153686 GGGAGCGAAACTACCGGAC 60.154 63.158 9.46 0.00 40.58 4.79
170 171 3.291611 GGGAGCGAAACTACCGGA 58.708 61.111 9.46 0.00 40.58 5.14
174 175 1.849097 CCGTATGGGAGCGAAACTAC 58.151 55.000 0.00 0.00 38.47 2.73
186 187 2.495409 TAGTGCCGCTCCCGTATGG 61.495 63.158 0.00 0.00 0.00 2.74
187 188 1.299926 GTAGTGCCGCTCCCGTATG 60.300 63.158 0.00 0.00 0.00 2.39
188 189 2.496291 GGTAGTGCCGCTCCCGTAT 61.496 63.158 0.00 0.00 0.00 3.06
189 190 3.142838 GGTAGTGCCGCTCCCGTA 61.143 66.667 0.00 0.00 0.00 4.02
198 199 2.189521 CCCATGACCGGTAGTGCC 59.810 66.667 7.34 0.00 0.00 5.01
199 200 2.189521 CCCCATGACCGGTAGTGC 59.810 66.667 7.34 0.00 0.00 4.40
200 201 1.520666 GTCCCCATGACCGGTAGTG 59.479 63.158 7.34 9.64 38.09 2.74
201 202 2.056223 CGTCCCCATGACCGGTAGT 61.056 63.158 7.34 0.00 41.18 2.73
202 203 2.792947 CCGTCCCCATGACCGGTAG 61.793 68.421 7.34 0.00 41.18 3.18
203 204 2.222124 TACCGTCCCCATGACCGGTA 62.222 60.000 7.34 16.10 43.95 4.02
204 205 2.884179 ATACCGTCCCCATGACCGGT 62.884 60.000 6.92 6.92 45.95 5.28
205 206 1.692173 AATACCGTCCCCATGACCGG 61.692 60.000 0.00 0.00 41.18 5.28
206 207 1.042229 TAATACCGTCCCCATGACCG 58.958 55.000 0.00 0.00 41.18 4.79
207 208 1.071228 GGTAATACCGTCCCCATGACC 59.929 57.143 0.00 0.00 41.18 4.02
208 209 1.764134 TGGTAATACCGTCCCCATGAC 59.236 52.381 4.83 0.00 42.58 3.06
209 210 1.764134 GTGGTAATACCGTCCCCATGA 59.236 52.381 4.83 0.00 42.58 3.07
210 211 1.487142 TGTGGTAATACCGTCCCCATG 59.513 52.381 4.83 0.00 42.58 3.66
211 212 1.882308 TGTGGTAATACCGTCCCCAT 58.118 50.000 4.83 0.00 42.58 4.00
212 213 1.555992 CTTGTGGTAATACCGTCCCCA 59.444 52.381 4.83 0.00 42.58 4.96
213 214 1.134310 CCTTGTGGTAATACCGTCCCC 60.134 57.143 4.83 0.00 42.58 4.81
214 215 1.556451 ACCTTGTGGTAATACCGTCCC 59.444 52.381 4.83 0.00 46.43 4.46
226 227 0.955428 CGGACCATGTGACCTTGTGG 60.955 60.000 0.00 0.00 37.74 4.17
227 228 0.955428 CCGGACCATGTGACCTTGTG 60.955 60.000 0.00 0.00 0.00 3.33
228 229 1.374947 CCGGACCATGTGACCTTGT 59.625 57.895 0.00 0.00 0.00 3.16
229 230 0.955428 CACCGGACCATGTGACCTTG 60.955 60.000 9.46 0.00 34.37 3.61
230 231 1.374947 CACCGGACCATGTGACCTT 59.625 57.895 9.46 0.00 34.37 3.50
231 232 2.592993 CCACCGGACCATGTGACCT 61.593 63.158 9.46 0.00 34.37 3.85
232 233 2.046314 CCACCGGACCATGTGACC 60.046 66.667 9.46 0.00 34.37 4.02
233 234 1.375523 GACCACCGGACCATGTGAC 60.376 63.158 9.46 3.61 34.37 3.67
234 235 2.589157 GGACCACCGGACCATGTGA 61.589 63.158 9.46 0.00 37.47 3.58
235 236 2.046314 GGACCACCGGACCATGTG 60.046 66.667 9.46 4.50 37.47 3.21
245 246 1.409427 CTCTAGGAATGACGGACCACC 59.591 57.143 0.00 0.00 0.00 4.61
246 247 1.409427 CCTCTAGGAATGACGGACCAC 59.591 57.143 0.00 0.00 37.39 4.16
247 248 1.688311 CCCTCTAGGAATGACGGACCA 60.688 57.143 0.00 0.00 38.24 4.02
248 249 1.041437 CCCTCTAGGAATGACGGACC 58.959 60.000 0.00 0.00 38.24 4.46
249 250 0.389757 GCCCTCTAGGAATGACGGAC 59.610 60.000 0.00 0.00 38.24 4.79
250 251 0.759436 GGCCCTCTAGGAATGACGGA 60.759 60.000 0.00 0.00 38.24 4.69
251 252 0.760945 AGGCCCTCTAGGAATGACGG 60.761 60.000 0.00 0.00 38.24 4.79
252 253 0.390860 CAGGCCCTCTAGGAATGACG 59.609 60.000 0.00 0.00 38.24 4.35
253 254 1.794714 TCAGGCCCTCTAGGAATGAC 58.205 55.000 0.00 0.00 38.24 3.06
254 255 2.803285 ATCAGGCCCTCTAGGAATGA 57.197 50.000 0.00 0.00 38.24 2.57
255 256 3.262915 CCTAATCAGGCCCTCTAGGAATG 59.737 52.174 0.00 0.00 37.37 2.67
256 257 3.144894 TCCTAATCAGGCCCTCTAGGAAT 59.855 47.826 14.94 0.00 42.30 3.01
257 258 2.522705 TCCTAATCAGGCCCTCTAGGAA 59.477 50.000 14.94 3.32 42.30 3.36
258 259 2.110899 CTCCTAATCAGGCCCTCTAGGA 59.889 54.545 15.93 15.93 42.30 2.94
259 260 2.534990 CTCCTAATCAGGCCCTCTAGG 58.465 57.143 0.00 5.24 42.30 3.02
260 261 2.158234 ACCTCCTAATCAGGCCCTCTAG 60.158 54.545 0.00 0.00 42.30 2.43
261 262 1.866943 ACCTCCTAATCAGGCCCTCTA 59.133 52.381 0.00 0.00 42.30 2.43
262 263 0.644937 ACCTCCTAATCAGGCCCTCT 59.355 55.000 0.00 0.00 42.30 3.69
263 264 0.761802 CACCTCCTAATCAGGCCCTC 59.238 60.000 0.00 0.00 42.30 4.30
264 265 0.695803 CCACCTCCTAATCAGGCCCT 60.696 60.000 0.00 0.00 42.30 5.19
265 266 1.839894 CCACCTCCTAATCAGGCCC 59.160 63.158 0.00 0.00 42.30 5.80
266 267 1.149401 GCCACCTCCTAATCAGGCC 59.851 63.158 0.00 0.00 42.30 5.19
267 268 0.548510 AAGCCACCTCCTAATCAGGC 59.451 55.000 0.00 0.00 42.30 4.85
268 269 2.648059 CAAAGCCACCTCCTAATCAGG 58.352 52.381 0.00 0.00 44.17 3.86
269 270 2.019984 GCAAAGCCACCTCCTAATCAG 58.980 52.381 0.00 0.00 0.00 2.90
270 271 1.678728 CGCAAAGCCACCTCCTAATCA 60.679 52.381 0.00 0.00 0.00 2.57
271 272 1.017387 CGCAAAGCCACCTCCTAATC 58.983 55.000 0.00 0.00 0.00 1.75
272 273 0.394352 CCGCAAAGCCACCTCCTAAT 60.394 55.000 0.00 0.00 0.00 1.73
273 274 1.002624 CCGCAAAGCCACCTCCTAA 60.003 57.895 0.00 0.00 0.00 2.69
274 275 1.774894 AACCGCAAAGCCACCTCCTA 61.775 55.000 0.00 0.00 0.00 2.94
275 276 3.133365 AACCGCAAAGCCACCTCCT 62.133 57.895 0.00 0.00 0.00 3.69
276 277 2.597510 AACCGCAAAGCCACCTCC 60.598 61.111 0.00 0.00 0.00 4.30
277 278 2.954611 GAACCGCAAAGCCACCTC 59.045 61.111 0.00 0.00 0.00 3.85
278 279 2.978010 CGAACCGCAAAGCCACCT 60.978 61.111 0.00 0.00 0.00 4.00
279 280 3.284449 ACGAACCGCAAAGCCACC 61.284 61.111 0.00 0.00 0.00 4.61
280 281 2.051345 CACGAACCGCAAAGCCAC 60.051 61.111 0.00 0.00 0.00 5.01
281 282 3.959975 GCACGAACCGCAAAGCCA 61.960 61.111 0.00 0.00 0.00 4.75
284 285 4.383602 CCCGCACGAACCGCAAAG 62.384 66.667 0.00 0.00 0.00 2.77
289 290 3.411351 CTTGACCCGCACGAACCG 61.411 66.667 0.00 0.00 0.00 4.44
290 291 0.953960 AATCTTGACCCGCACGAACC 60.954 55.000 0.00 0.00 0.00 3.62
291 292 0.872388 AAATCTTGACCCGCACGAAC 59.128 50.000 0.00 0.00 0.00 3.95
292 293 1.153353 GAAATCTTGACCCGCACGAA 58.847 50.000 0.00 0.00 0.00 3.85
293 294 1.011968 CGAAATCTTGACCCGCACGA 61.012 55.000 0.00 0.00 0.00 4.35
294 295 1.011968 TCGAAATCTTGACCCGCACG 61.012 55.000 0.00 0.00 0.00 5.34
295 296 1.062587 CATCGAAATCTTGACCCGCAC 59.937 52.381 0.00 0.00 0.00 5.34
296 297 1.368641 CATCGAAATCTTGACCCGCA 58.631 50.000 0.00 0.00 0.00 5.69
297 298 0.028110 GCATCGAAATCTTGACCCGC 59.972 55.000 0.00 0.00 0.00 6.13
298 299 1.656652 AGCATCGAAATCTTGACCCG 58.343 50.000 0.00 0.00 0.00 5.28
299 300 2.540101 CGTAGCATCGAAATCTTGACCC 59.460 50.000 0.00 0.00 0.00 4.46
300 301 3.000322 CACGTAGCATCGAAATCTTGACC 60.000 47.826 7.49 0.00 34.70 4.02
301 302 3.000322 CCACGTAGCATCGAAATCTTGAC 60.000 47.826 7.49 0.00 34.70 3.18
302 303 3.119280 TCCACGTAGCATCGAAATCTTGA 60.119 43.478 7.49 0.00 34.70 3.02
303 304 3.000322 GTCCACGTAGCATCGAAATCTTG 60.000 47.826 7.49 0.00 34.70 3.02
304 305 3.187700 GTCCACGTAGCATCGAAATCTT 58.812 45.455 7.49 0.00 34.70 2.40
305 306 2.165641 TGTCCACGTAGCATCGAAATCT 59.834 45.455 7.49 0.00 34.70 2.40
306 307 2.536365 TGTCCACGTAGCATCGAAATC 58.464 47.619 7.49 0.00 34.70 2.17
307 308 2.665649 TGTCCACGTAGCATCGAAAT 57.334 45.000 7.49 0.00 34.70 2.17
308 309 2.063266 GTTGTCCACGTAGCATCGAAA 58.937 47.619 7.49 0.00 34.70 3.46
309 310 1.670674 GGTTGTCCACGTAGCATCGAA 60.671 52.381 7.49 0.00 34.70 3.71
310 311 0.108992 GGTTGTCCACGTAGCATCGA 60.109 55.000 7.49 0.00 34.70 3.59
311 312 0.389296 TGGTTGTCCACGTAGCATCG 60.389 55.000 0.00 0.00 39.03 3.84
312 313 1.803334 TTGGTTGTCCACGTAGCATC 58.197 50.000 0.00 0.00 44.22 3.91
313 314 2.264005 TTTGGTTGTCCACGTAGCAT 57.736 45.000 0.00 0.00 44.22 3.79
314 315 2.264005 ATTTGGTTGTCCACGTAGCA 57.736 45.000 0.00 0.00 44.22 3.49
315 316 3.592059 TCTATTTGGTTGTCCACGTAGC 58.408 45.455 0.00 0.00 44.22 3.58
316 317 5.416083 TGATCTATTTGGTTGTCCACGTAG 58.584 41.667 0.00 0.00 44.22 3.51
317 318 5.408880 TGATCTATTTGGTTGTCCACGTA 57.591 39.130 0.00 0.00 44.22 3.57
318 319 4.280436 TGATCTATTTGGTTGTCCACGT 57.720 40.909 0.00 0.00 44.22 4.49
319 320 5.621197 TTTGATCTATTTGGTTGTCCACG 57.379 39.130 0.00 0.00 44.22 4.94
320 321 7.148590 GCAATTTTGATCTATTTGGTTGTCCAC 60.149 37.037 0.00 0.00 44.22 4.02
321 322 6.873076 GCAATTTTGATCTATTTGGTTGTCCA 59.127 34.615 0.00 0.00 42.66 4.02
322 323 6.873076 TGCAATTTTGATCTATTTGGTTGTCC 59.127 34.615 0.00 0.00 0.00 4.02
323 324 7.887996 TGCAATTTTGATCTATTTGGTTGTC 57.112 32.000 0.00 0.00 0.00 3.18
324 325 8.095792 TGATGCAATTTTGATCTATTTGGTTGT 58.904 29.630 0.00 0.00 0.00 3.32
325 326 8.481974 TGATGCAATTTTGATCTATTTGGTTG 57.518 30.769 0.00 0.00 0.00 3.77
326 327 9.158233 CTTGATGCAATTTTGATCTATTTGGTT 57.842 29.630 0.00 0.00 0.00 3.67
327 328 7.279313 GCTTGATGCAATTTTGATCTATTTGGT 59.721 33.333 0.00 0.00 42.31 3.67
328 329 7.516155 CGCTTGATGCAATTTTGATCTATTTGG 60.516 37.037 0.00 0.00 43.06 3.28
329 330 7.221259 TCGCTTGATGCAATTTTGATCTATTTG 59.779 33.333 0.00 0.00 43.06 2.32
330 331 7.259882 TCGCTTGATGCAATTTTGATCTATTT 58.740 30.769 0.00 0.00 43.06 1.40
331 332 6.798482 TCGCTTGATGCAATTTTGATCTATT 58.202 32.000 0.00 0.00 43.06 1.73
332 333 6.381481 TCGCTTGATGCAATTTTGATCTAT 57.619 33.333 0.00 0.00 43.06 1.98
333 334 5.220912 CCTCGCTTGATGCAATTTTGATCTA 60.221 40.000 0.00 0.00 43.06 1.98
334 335 4.439700 CCTCGCTTGATGCAATTTTGATCT 60.440 41.667 0.00 0.00 43.06 2.75
335 336 3.795101 CCTCGCTTGATGCAATTTTGATC 59.205 43.478 0.00 0.00 43.06 2.92
336 337 3.777478 CCTCGCTTGATGCAATTTTGAT 58.223 40.909 0.00 0.00 43.06 2.57
337 338 2.671914 GCCTCGCTTGATGCAATTTTGA 60.672 45.455 0.00 0.00 43.06 2.69
338 339 1.657094 GCCTCGCTTGATGCAATTTTG 59.343 47.619 0.00 0.00 43.06 2.44
339 340 1.273048 TGCCTCGCTTGATGCAATTTT 59.727 42.857 0.00 0.00 39.79 1.82
340 341 0.889994 TGCCTCGCTTGATGCAATTT 59.110 45.000 0.00 0.00 39.79 1.82
341 342 0.889994 TTGCCTCGCTTGATGCAATT 59.110 45.000 4.25 0.00 44.74 2.32
342 343 2.570365 TTGCCTCGCTTGATGCAAT 58.430 47.368 4.25 0.00 44.74 3.56
343 344 1.580942 GTTGCCTCGCTTGATGCAA 59.419 52.632 4.25 4.25 46.53 4.08
344 345 2.334946 GGTTGCCTCGCTTGATGCA 61.335 57.895 0.00 0.00 40.79 3.96
345 346 1.865788 TTGGTTGCCTCGCTTGATGC 61.866 55.000 0.00 0.00 34.26 3.91
346 347 0.597568 TTTGGTTGCCTCGCTTGATG 59.402 50.000 0.00 0.00 0.00 3.07
347 348 0.598065 GTTTGGTTGCCTCGCTTGAT 59.402 50.000 0.00 0.00 0.00 2.57
348 349 0.749818 TGTTTGGTTGCCTCGCTTGA 60.750 50.000 0.00 0.00 0.00 3.02
349 350 0.314935 ATGTTTGGTTGCCTCGCTTG 59.685 50.000 0.00 0.00 0.00 4.01
350 351 1.039856 AATGTTTGGTTGCCTCGCTT 58.960 45.000 0.00 0.00 0.00 4.68
351 352 1.000274 GAAATGTTTGGTTGCCTCGCT 60.000 47.619 0.00 0.00 0.00 4.93
352 353 1.418373 GAAATGTTTGGTTGCCTCGC 58.582 50.000 0.00 0.00 0.00 5.03
353 354 1.613437 AGGAAATGTTTGGTTGCCTCG 59.387 47.619 0.00 0.00 0.00 4.63
354 355 4.280929 ACTTAGGAAATGTTTGGTTGCCTC 59.719 41.667 0.00 0.00 0.00 4.70
355 356 4.223144 ACTTAGGAAATGTTTGGTTGCCT 58.777 39.130 0.00 0.00 0.00 4.75
356 357 4.600692 ACTTAGGAAATGTTTGGTTGCC 57.399 40.909 0.00 0.00 0.00 4.52
357 358 4.988540 GGAACTTAGGAAATGTTTGGTTGC 59.011 41.667 0.00 0.00 0.00 4.17
358 359 5.510690 GGGGAACTTAGGAAATGTTTGGTTG 60.511 44.000 0.00 0.00 0.00 3.77
359 360 4.591498 GGGGAACTTAGGAAATGTTTGGTT 59.409 41.667 0.00 0.00 0.00 3.67
360 361 4.140782 AGGGGAACTTAGGAAATGTTTGGT 60.141 41.667 0.00 0.00 0.00 3.67
361 362 4.416516 AGGGGAACTTAGGAAATGTTTGG 58.583 43.478 0.00 0.00 0.00 3.28
362 363 6.946009 TCTTAGGGGAACTTAGGAAATGTTTG 59.054 38.462 0.00 0.00 0.00 2.93
363 364 7.098845 TCTTAGGGGAACTTAGGAAATGTTT 57.901 36.000 0.00 0.00 0.00 2.83
364 365 6.713731 TCTTAGGGGAACTTAGGAAATGTT 57.286 37.500 0.00 0.00 0.00 2.71
365 366 6.713731 TTCTTAGGGGAACTTAGGAAATGT 57.286 37.500 0.00 0.00 35.52 2.71
366 367 7.402862 TCTTTCTTAGGGGAACTTAGGAAATG 58.597 38.462 0.00 0.00 43.61 2.32
367 368 7.584396 TCTTTCTTAGGGGAACTTAGGAAAT 57.416 36.000 0.00 0.00 43.61 2.17
368 369 7.396906 TTCTTTCTTAGGGGAACTTAGGAAA 57.603 36.000 0.00 0.00 42.83 3.13
369 370 7.584396 ATTCTTTCTTAGGGGAACTTAGGAA 57.416 36.000 0.00 0.00 36.43 3.36
370 371 8.871570 ATATTCTTTCTTAGGGGAACTTAGGA 57.128 34.615 0.00 0.00 0.00 2.94
393 394 8.404107 TCTCCGACATGTGAGACAAATATATA 57.596 34.615 1.15 0.00 32.84 0.86
430 431 0.746204 TGTTGTGATGTGCCGTGTGT 60.746 50.000 0.00 0.00 0.00 3.72
441 442 5.532406 ACAACTTTCAGCACTATGTTGTGAT 59.468 36.000 13.80 0.00 43.85 3.06
466 467 8.196771 ACTTGACAAAAATATCAGTTGCTTTCA 58.803 29.630 0.00 0.00 0.00 2.69
473 474 7.653311 GCCTTTCACTTGACAAAAATATCAGTT 59.347 33.333 0.00 0.00 0.00 3.16
475 476 7.147312 TGCCTTTCACTTGACAAAAATATCAG 58.853 34.615 0.00 0.00 0.00 2.90
476 477 7.048629 TGCCTTTCACTTGACAAAAATATCA 57.951 32.000 0.00 0.00 0.00 2.15
477 478 7.945033 TTGCCTTTCACTTGACAAAAATATC 57.055 32.000 0.00 0.00 0.00 1.63
479 480 6.536941 GGTTTGCCTTTCACTTGACAAAAATA 59.463 34.615 0.00 0.00 0.00 1.40
480 481 5.353956 GGTTTGCCTTTCACTTGACAAAAAT 59.646 36.000 0.00 0.00 0.00 1.82
481 482 4.693095 GGTTTGCCTTTCACTTGACAAAAA 59.307 37.500 0.00 0.00 0.00 1.94
482 483 4.249661 GGTTTGCCTTTCACTTGACAAAA 58.750 39.130 0.00 0.00 0.00 2.44
483 484 3.259374 TGGTTTGCCTTTCACTTGACAAA 59.741 39.130 0.00 0.00 35.27 2.83
484 485 2.828520 TGGTTTGCCTTTCACTTGACAA 59.171 40.909 0.00 0.00 35.27 3.18
485 486 2.426738 CTGGTTTGCCTTTCACTTGACA 59.573 45.455 0.00 0.00 35.27 3.58
486 487 2.799562 GCTGGTTTGCCTTTCACTTGAC 60.800 50.000 0.00 0.00 35.27 3.18
487 488 1.408702 GCTGGTTTGCCTTTCACTTGA 59.591 47.619 0.00 0.00 35.27 3.02
488 489 1.410153 AGCTGGTTTGCCTTTCACTTG 59.590 47.619 0.00 0.00 35.27 3.16
489 490 1.410153 CAGCTGGTTTGCCTTTCACTT 59.590 47.619 5.57 0.00 35.27 3.16
490 491 1.035139 CAGCTGGTTTGCCTTTCACT 58.965 50.000 5.57 0.00 35.27 3.41
491 492 0.032540 CCAGCTGGTTTGCCTTTCAC 59.967 55.000 25.53 0.00 35.27 3.18
492 493 2.428834 CCAGCTGGTTTGCCTTTCA 58.571 52.632 25.53 0.00 35.27 2.69
503 504 0.179062 GGCTCTCACATACCAGCTGG 60.179 60.000 31.60 31.60 42.17 4.85
504 505 0.538584 TGGCTCTCACATACCAGCTG 59.461 55.000 6.78 6.78 32.14 4.24
505 506 1.279496 TTGGCTCTCACATACCAGCT 58.721 50.000 0.00 0.00 32.79 4.24
506 507 2.338577 ATTGGCTCTCACATACCAGC 57.661 50.000 0.00 0.00 32.79 4.85
507 508 4.572389 GTGTTATTGGCTCTCACATACCAG 59.428 45.833 0.00 0.00 32.79 4.00
508 509 4.019771 TGTGTTATTGGCTCTCACATACCA 60.020 41.667 0.00 0.00 34.74 3.25
509 510 4.513442 TGTGTTATTGGCTCTCACATACC 58.487 43.478 0.00 0.00 34.74 2.73
510 511 5.050769 CGATGTGTTATTGGCTCTCACATAC 60.051 44.000 8.68 3.70 45.56 2.39
511 512 5.049828 CGATGTGTTATTGGCTCTCACATA 58.950 41.667 8.68 0.00 45.56 2.29
513 514 3.261580 CGATGTGTTATTGGCTCTCACA 58.738 45.455 0.00 0.00 41.93 3.58
514 515 2.609459 CCGATGTGTTATTGGCTCTCAC 59.391 50.000 0.00 0.00 0.00 3.51
515 516 2.905075 CCGATGTGTTATTGGCTCTCA 58.095 47.619 0.00 0.00 0.00 3.27
516 517 1.599542 GCCGATGTGTTATTGGCTCTC 59.400 52.381 10.26 0.00 43.63 3.20
517 518 1.668419 GCCGATGTGTTATTGGCTCT 58.332 50.000 10.26 0.00 43.63 4.09
520 521 1.264288 GCTAGCCGATGTGTTATTGGC 59.736 52.381 2.29 9.64 46.58 4.52
521 522 2.287915 GTGCTAGCCGATGTGTTATTGG 59.712 50.000 13.29 0.00 0.00 3.16
522 523 2.287915 GGTGCTAGCCGATGTGTTATTG 59.712 50.000 13.29 0.00 0.00 1.90
523 524 2.170607 AGGTGCTAGCCGATGTGTTATT 59.829 45.455 13.29 0.00 0.00 1.40
524 525 1.762957 AGGTGCTAGCCGATGTGTTAT 59.237 47.619 13.29 0.00 0.00 1.89
525 526 1.134818 CAGGTGCTAGCCGATGTGTTA 60.135 52.381 13.29 0.00 0.00 2.41
526 527 0.391661 CAGGTGCTAGCCGATGTGTT 60.392 55.000 13.29 0.00 0.00 3.32
527 528 1.219124 CAGGTGCTAGCCGATGTGT 59.781 57.895 13.29 0.00 0.00 3.72
528 529 1.522355 CCAGGTGCTAGCCGATGTG 60.522 63.158 13.29 2.58 0.00 3.21
529 530 0.686441 TACCAGGTGCTAGCCGATGT 60.686 55.000 13.29 5.79 0.00 3.06
530 531 0.681733 ATACCAGGTGCTAGCCGATG 59.318 55.000 13.29 7.69 0.00 3.84
531 532 1.344763 GAATACCAGGTGCTAGCCGAT 59.655 52.381 13.29 0.00 0.00 4.18
532 533 0.750850 GAATACCAGGTGCTAGCCGA 59.249 55.000 13.29 0.00 0.00 5.54
533 534 0.597637 CGAATACCAGGTGCTAGCCG 60.598 60.000 13.29 0.00 0.00 5.52
534 535 0.750850 TCGAATACCAGGTGCTAGCC 59.249 55.000 13.29 3.27 0.00 3.93
535 536 1.854227 GTCGAATACCAGGTGCTAGC 58.146 55.000 8.10 8.10 0.00 3.42
536 537 1.269102 CCGTCGAATACCAGGTGCTAG 60.269 57.143 0.76 0.00 0.00 3.42
537 538 0.742505 CCGTCGAATACCAGGTGCTA 59.257 55.000 0.76 0.00 0.00 3.49
538 539 0.968901 TCCGTCGAATACCAGGTGCT 60.969 55.000 0.76 0.00 0.00 4.40
539 540 0.804933 GTCCGTCGAATACCAGGTGC 60.805 60.000 0.76 0.00 0.00 5.01
540 541 0.524816 CGTCCGTCGAATACCAGGTG 60.525 60.000 0.76 0.00 42.86 4.00
541 542 0.677731 TCGTCCGTCGAATACCAGGT 60.678 55.000 0.00 0.00 45.98 4.00
542 543 2.100846 TCGTCCGTCGAATACCAGG 58.899 57.895 0.00 0.00 45.98 4.45
562 563 1.519455 CGTTCTGCTCGATGTCCCC 60.519 63.158 0.00 0.00 0.00 4.81
587 588 2.317040 CGTAGGGAATAGGCTCCTTCA 58.683 52.381 10.73 0.00 35.63 3.02
617 618 9.313118 CTACTACTTGTGTATGACATATGCAAA 57.687 33.333 1.58 0.00 33.40 3.68
654 655 4.880120 TCGTCGTCTGAGTAAATGGAGTAT 59.120 41.667 0.00 0.00 0.00 2.12
670 671 0.840729 GCTCGAATGTGATCGTCGTC 59.159 55.000 7.50 0.00 43.19 4.20
671 672 0.861866 CGCTCGAATGTGATCGTCGT 60.862 55.000 7.50 0.00 43.19 4.34
672 673 1.532343 CCGCTCGAATGTGATCGTCG 61.532 60.000 0.00 2.54 43.19 5.12
673 674 1.812214 GCCGCTCGAATGTGATCGTC 61.812 60.000 0.00 0.00 43.19 4.20
692 693 9.859427 TTTATCAGTTGATTTTCATGGCTTTAG 57.141 29.630 0.00 0.00 36.05 1.85
892 902 5.241285 GGACGGAGAAACTATAACTAGGAGG 59.759 48.000 0.00 0.00 0.00 4.30
947 963 3.194329 CAGATGATCGAATGGGCTAGCTA 59.806 47.826 15.72 4.59 0.00 3.32
948 964 2.028294 CAGATGATCGAATGGGCTAGCT 60.028 50.000 15.72 0.00 0.00 3.32
949 965 2.289320 ACAGATGATCGAATGGGCTAGC 60.289 50.000 6.04 6.04 0.00 3.42
950 966 3.674528 ACAGATGATCGAATGGGCTAG 57.325 47.619 0.00 0.00 0.00 3.42
957 973 4.679373 AGGCTACAACAGATGATCGAAT 57.321 40.909 0.00 0.00 0.00 3.34
964 980 3.535561 CCCTACAAGGCTACAACAGATG 58.464 50.000 0.00 0.00 32.73 2.90
965 981 3.914426 CCCTACAAGGCTACAACAGAT 57.086 47.619 0.00 0.00 32.73 2.90
981 997 2.102109 TTGCGAACGTTGGAGCCCTA 62.102 55.000 14.98 0.00 0.00 3.53
1485 1523 3.470888 CCGGCCTCGATGTCCCTT 61.471 66.667 0.00 0.00 39.00 3.95
1561 1599 1.891060 GCCACGACGTTGAGCTTGAG 61.891 60.000 10.51 0.00 0.00 3.02
1665 1703 2.939460 AAACGAACAACAAGCAAGCT 57.061 40.000 0.00 0.00 0.00 3.74
1696 1740 1.812922 CACGCTCTCCCTGTCATGC 60.813 63.158 0.00 0.00 0.00 4.06
1697 1741 1.812922 GCACGCTCTCCCTGTCATG 60.813 63.158 0.00 0.00 0.00 3.07
1698 1742 1.954362 GAGCACGCTCTCCCTGTCAT 61.954 60.000 11.81 0.00 39.80 3.06
1699 1743 2.601666 AGCACGCTCTCCCTGTCA 60.602 61.111 0.00 0.00 0.00 3.58
1700 1744 2.159819 TTGAGCACGCTCTCCCTGTC 62.160 60.000 19.17 0.00 43.12 3.51
1701 1745 1.548357 ATTGAGCACGCTCTCCCTGT 61.548 55.000 19.17 0.00 43.12 4.00
1702 1746 1.088340 CATTGAGCACGCTCTCCCTG 61.088 60.000 19.17 8.08 43.12 4.45
1710 1754 1.014044 TCGAGAACCATTGAGCACGC 61.014 55.000 0.00 0.00 0.00 5.34
1748 1792 4.019501 AGAGGATCAAGTATCATCATGGCC 60.020 45.833 0.00 0.00 45.80 5.36
1749 1793 5.046448 AGAGAGGATCAAGTATCATCATGGC 60.046 44.000 0.00 0.00 45.80 4.40
1750 1794 6.608539 AGAGAGGATCAAGTATCATCATGG 57.391 41.667 0.00 0.00 45.80 3.66
1784 1828 6.971184 CCAAGACATAAGAGCAATTCATCAAC 59.029 38.462 0.00 0.00 0.00 3.18
1785 1829 6.660521 ACCAAGACATAAGAGCAATTCATCAA 59.339 34.615 0.00 0.00 0.00 2.57
1786 1830 6.182627 ACCAAGACATAAGAGCAATTCATCA 58.817 36.000 0.00 0.00 0.00 3.07
1787 1831 6.541641 AGACCAAGACATAAGAGCAATTCATC 59.458 38.462 0.00 0.00 0.00 2.92
1788 1832 6.421485 AGACCAAGACATAAGAGCAATTCAT 58.579 36.000 0.00 0.00 0.00 2.57
1789 1833 5.809001 AGACCAAGACATAAGAGCAATTCA 58.191 37.500 0.00 0.00 0.00 2.57
1790 1834 6.112058 AGAGACCAAGACATAAGAGCAATTC 58.888 40.000 0.00 0.00 0.00 2.17
1791 1835 6.059787 AGAGACCAAGACATAAGAGCAATT 57.940 37.500 0.00 0.00 0.00 2.32
1792 1836 5.690464 AGAGACCAAGACATAAGAGCAAT 57.310 39.130 0.00 0.00 0.00 3.56
1793 1837 5.482908 GAAGAGACCAAGACATAAGAGCAA 58.517 41.667 0.00 0.00 0.00 3.91
1794 1838 4.380973 CGAAGAGACCAAGACATAAGAGCA 60.381 45.833 0.00 0.00 0.00 4.26
1795 1839 4.109050 CGAAGAGACCAAGACATAAGAGC 58.891 47.826 0.00 0.00 0.00 4.09
1796 1840 5.098893 CACGAAGAGACCAAGACATAAGAG 58.901 45.833 0.00 0.00 0.00 2.85
1797 1841 4.523173 ACACGAAGAGACCAAGACATAAGA 59.477 41.667 0.00 0.00 0.00 2.10
1798 1842 4.810790 ACACGAAGAGACCAAGACATAAG 58.189 43.478 0.00 0.00 0.00 1.73
1799 1843 4.866508 ACACGAAGAGACCAAGACATAA 57.133 40.909 0.00 0.00 0.00 1.90
1800 1844 7.052248 TCTATACACGAAGAGACCAAGACATA 58.948 38.462 0.00 0.00 0.00 2.29
1801 1845 5.886474 TCTATACACGAAGAGACCAAGACAT 59.114 40.000 0.00 0.00 0.00 3.06
1802 1846 5.250982 TCTATACACGAAGAGACCAAGACA 58.749 41.667 0.00 0.00 0.00 3.41
1803 1847 5.220892 CCTCTATACACGAAGAGACCAAGAC 60.221 48.000 0.98 0.00 41.51 3.01
1804 1848 4.882427 CCTCTATACACGAAGAGACCAAGA 59.118 45.833 0.98 0.00 41.51 3.02
1805 1849 4.882427 TCCTCTATACACGAAGAGACCAAG 59.118 45.833 0.98 0.00 41.51 3.61
1806 1850 4.851843 TCCTCTATACACGAAGAGACCAA 58.148 43.478 0.98 0.00 41.51 3.67
1807 1851 4.498894 TCCTCTATACACGAAGAGACCA 57.501 45.455 0.98 0.00 41.51 4.02
1808 1852 5.125097 TGTTTCCTCTATACACGAAGAGACC 59.875 44.000 0.98 0.00 41.51 3.85
1809 1853 6.192234 TGTTTCCTCTATACACGAAGAGAC 57.808 41.667 0.98 0.00 41.51 3.36
1810 1854 5.357314 CCTGTTTCCTCTATACACGAAGAGA 59.643 44.000 0.98 0.00 41.51 3.10
1811 1855 5.125739 ACCTGTTTCCTCTATACACGAAGAG 59.874 44.000 0.00 0.00 39.19 2.85
1812 1856 5.014858 ACCTGTTTCCTCTATACACGAAGA 58.985 41.667 0.00 0.00 0.00 2.87
1813 1857 5.326200 ACCTGTTTCCTCTATACACGAAG 57.674 43.478 0.00 0.00 0.00 3.79
1814 1858 5.733620 AACCTGTTTCCTCTATACACGAA 57.266 39.130 0.00 0.00 0.00 3.85
1815 1859 5.733620 AAACCTGTTTCCTCTATACACGA 57.266 39.130 0.00 0.00 0.00 4.35
1816 1860 8.488651 AATAAAACCTGTTTCCTCTATACACG 57.511 34.615 0.00 0.00 31.45 4.49
1848 1892 9.762933 CAAATCTGTTTCTTTCCTTGGAAAATA 57.237 29.630 14.75 4.90 33.97 1.40
1849 1893 8.267183 ACAAATCTGTTTCTTTCCTTGGAAAAT 58.733 29.630 14.75 2.68 33.97 1.82
1850 1894 7.619965 ACAAATCTGTTTCTTTCCTTGGAAAA 58.380 30.769 14.75 5.04 33.97 2.29
1851 1895 7.181569 ACAAATCTGTTTCTTTCCTTGGAAA 57.818 32.000 13.43 13.43 28.57 3.13
1852 1896 6.790232 ACAAATCTGTTTCTTTCCTTGGAA 57.210 33.333 0.00 0.00 28.57 3.53
1853 1897 6.379703 TGAACAAATCTGTTTCTTTCCTTGGA 59.620 34.615 0.00 0.00 45.98 3.53
1854 1898 6.476706 GTGAACAAATCTGTTTCTTTCCTTGG 59.523 38.462 0.00 0.00 45.98 3.61
1855 1899 7.260603 AGTGAACAAATCTGTTTCTTTCCTTG 58.739 34.615 0.00 0.00 45.98 3.61
1856 1900 7.410120 AGTGAACAAATCTGTTTCTTTCCTT 57.590 32.000 0.00 0.00 45.98 3.36
1857 1901 7.775561 ACTAGTGAACAAATCTGTTTCTTTCCT 59.224 33.333 0.00 0.00 45.98 3.36
1858 1902 7.931275 ACTAGTGAACAAATCTGTTTCTTTCC 58.069 34.615 0.00 0.00 45.98 3.13
1859 1903 9.865484 GTACTAGTGAACAAATCTGTTTCTTTC 57.135 33.333 5.39 0.00 45.98 2.62
1860 1904 9.614792 AGTACTAGTGAACAAATCTGTTTCTTT 57.385 29.630 5.39 0.00 45.98 2.52
1861 1905 9.046296 CAGTACTAGTGAACAAATCTGTTTCTT 57.954 33.333 5.39 0.00 45.98 2.52
1862 1906 8.421784 TCAGTACTAGTGAACAAATCTGTTTCT 58.578 33.333 5.39 0.00 45.98 2.52
1863 1907 8.589335 TCAGTACTAGTGAACAAATCTGTTTC 57.411 34.615 5.39 0.00 45.98 2.78
1864 1908 8.993121 CATCAGTACTAGTGAACAAATCTGTTT 58.007 33.333 5.39 0.00 45.98 2.83
1866 1910 7.600375 CACATCAGTACTAGTGAACAAATCTGT 59.400 37.037 5.39 0.00 37.39 3.41
1867 1911 7.600375 ACACATCAGTACTAGTGAACAAATCTG 59.400 37.037 21.91 8.02 35.97 2.90
1868 1912 7.671302 ACACATCAGTACTAGTGAACAAATCT 58.329 34.615 21.91 2.30 35.97 2.40
1869 1913 7.891183 ACACATCAGTACTAGTGAACAAATC 57.109 36.000 21.91 0.00 35.97 2.17
1870 1914 8.677148 AAACACATCAGTACTAGTGAACAAAT 57.323 30.769 21.91 3.39 35.97 2.32
1871 1915 8.394877 CAAAACACATCAGTACTAGTGAACAAA 58.605 33.333 21.91 0.00 35.97 2.83
1872 1916 7.551262 ACAAAACACATCAGTACTAGTGAACAA 59.449 33.333 21.91 0.00 35.97 2.83
1873 1917 7.045416 ACAAAACACATCAGTACTAGTGAACA 58.955 34.615 21.91 0.00 35.97 3.18
1874 1918 7.478520 ACAAAACACATCAGTACTAGTGAAC 57.521 36.000 21.91 0.00 35.97 3.18
1875 1919 7.551262 ACAACAAAACACATCAGTACTAGTGAA 59.449 33.333 21.91 0.00 35.97 3.18
1876 1920 7.045416 ACAACAAAACACATCAGTACTAGTGA 58.955 34.615 21.91 7.38 35.97 3.41
1877 1921 7.246674 ACAACAAAACACATCAGTACTAGTG 57.753 36.000 16.36 16.36 37.95 2.74
1878 1922 8.951787 TTACAACAAAACACATCAGTACTAGT 57.048 30.769 0.00 0.00 0.00 2.57
1881 1925 7.700656 GCTTTTACAACAAAACACATCAGTACT 59.299 33.333 0.00 0.00 0.00 2.73
1882 1926 7.700656 AGCTTTTACAACAAAACACATCAGTAC 59.299 33.333 0.00 0.00 0.00 2.73
1883 1927 7.767261 AGCTTTTACAACAAAACACATCAGTA 58.233 30.769 0.00 0.00 0.00 2.74
1884 1928 6.630071 AGCTTTTACAACAAAACACATCAGT 58.370 32.000 0.00 0.00 0.00 3.41
1885 1929 7.524294 AAGCTTTTACAACAAAACACATCAG 57.476 32.000 0.00 0.00 0.00 2.90
1886 1930 7.897575 AAAGCTTTTACAACAAAACACATCA 57.102 28.000 5.69 0.00 0.00 3.07
1887 1931 9.900264 CTAAAAGCTTTTACAACAAAACACATC 57.100 29.630 24.42 0.00 0.00 3.06
1888 1932 9.430623 ACTAAAAGCTTTTACAACAAAACACAT 57.569 25.926 24.42 1.26 0.00 3.21
1889 1933 8.819643 ACTAAAAGCTTTTACAACAAAACACA 57.180 26.923 24.42 5.01 0.00 3.72
1890 1934 9.523730 CAACTAAAAGCTTTTACAACAAAACAC 57.476 29.630 24.42 0.00 0.00 3.32
1891 1935 9.477484 TCAACTAAAAGCTTTTACAACAAAACA 57.523 25.926 24.42 5.68 0.00 2.83
1894 1938 9.862371 TGATCAACTAAAAGCTTTTACAACAAA 57.138 25.926 24.42 7.70 0.00 2.83
1895 1939 9.515020 CTGATCAACTAAAAGCTTTTACAACAA 57.485 29.630 24.42 8.37 0.00 2.83
1896 1940 8.134895 CCTGATCAACTAAAAGCTTTTACAACA 58.865 33.333 24.42 16.77 0.00 3.33
1897 1941 7.114953 GCCTGATCAACTAAAAGCTTTTACAAC 59.885 37.037 24.42 13.96 0.00 3.32
1898 1942 7.145323 GCCTGATCAACTAAAAGCTTTTACAA 58.855 34.615 24.42 9.74 0.00 2.41
1899 1943 6.567701 CGCCTGATCAACTAAAAGCTTTTACA 60.568 38.462 24.42 18.39 0.00 2.41
1900 1944 5.795441 CGCCTGATCAACTAAAAGCTTTTAC 59.205 40.000 24.42 15.31 0.00 2.01
1901 1945 5.472137 ACGCCTGATCAACTAAAAGCTTTTA 59.528 36.000 25.94 25.94 0.00 1.52
1902 1946 4.278419 ACGCCTGATCAACTAAAAGCTTTT 59.722 37.500 26.50 26.50 0.00 2.27
1903 1947 3.821033 ACGCCTGATCAACTAAAAGCTTT 59.179 39.130 5.69 5.69 0.00 3.51
1904 1948 3.412386 ACGCCTGATCAACTAAAAGCTT 58.588 40.909 0.00 0.00 0.00 3.74
1905 1949 3.059352 ACGCCTGATCAACTAAAAGCT 57.941 42.857 0.00 0.00 0.00 3.74
1906 1950 6.202954 ACATATACGCCTGATCAACTAAAAGC 59.797 38.462 0.00 0.00 0.00 3.51
1907 1951 7.715265 ACATATACGCCTGATCAACTAAAAG 57.285 36.000 0.00 0.00 0.00 2.27
1908 1952 9.772973 ATAACATATACGCCTGATCAACTAAAA 57.227 29.630 0.00 0.00 0.00 1.52
1921 1965 4.152402 CACAGCCTGAATAACATATACGCC 59.848 45.833 0.00 0.00 0.00 5.68
1968 2012 6.827586 AAACACACGGTAATGTCCAAATAT 57.172 33.333 0.00 0.00 0.00 1.28
1977 2021 4.822036 TTCTGGAAAACACACGGTAATG 57.178 40.909 0.00 0.00 0.00 1.90
2016 2060 3.016031 TGTTGATACCAAGCGCATCAAT 58.984 40.909 19.21 3.13 39.95 2.57
2053 2099 9.071276 CGTTGTTAGGGATACTAGTAGGATTAA 57.929 37.037 8.85 2.87 32.16 1.40
2054 2100 8.220559 ACGTTGTTAGGGATACTAGTAGGATTA 58.779 37.037 8.85 0.00 32.16 1.75
2056 2102 6.489361 CACGTTGTTAGGGATACTAGTAGGAT 59.511 42.308 8.85 0.00 32.16 3.24
2057 2103 5.824624 CACGTTGTTAGGGATACTAGTAGGA 59.175 44.000 8.85 0.00 32.16 2.94
2058 2104 5.009410 CCACGTTGTTAGGGATACTAGTAGG 59.991 48.000 8.85 0.00 32.16 3.18
2059 2105 5.591877 ACCACGTTGTTAGGGATACTAGTAG 59.408 44.000 8.85 0.00 32.16 2.57
2060 2106 5.509498 ACCACGTTGTTAGGGATACTAGTA 58.491 41.667 4.77 4.77 32.16 1.82
2061 2107 4.347607 ACCACGTTGTTAGGGATACTAGT 58.652 43.478 0.00 0.00 32.16 2.57
2119 2165 5.661458 AGTCGAGACTTCTTTCTCAAAACA 58.339 37.500 0.00 0.00 42.03 2.83
2166 2212 8.194769 TGTTTCCCTCTAAAAATCACAGTTTTC 58.805 33.333 0.00 0.00 31.29 2.29
2192 2239 1.153706 CGGACGGTCGCCAGTTAAT 60.154 57.895 1.43 0.00 0.00 1.40
2202 2249 4.803426 CTCTGCTGGCGGACGGTC 62.803 72.222 0.00 0.00 0.00 4.79
2209 2256 2.033328 CTGCGAAATCTCTGCTGGCG 62.033 60.000 0.00 0.00 0.00 5.69
2215 2262 3.364366 GGTTGTTCACTGCGAAATCTCTG 60.364 47.826 0.00 0.00 34.69 3.35
2229 2276 1.098712 GGTTCCTGCACGGTTGTTCA 61.099 55.000 2.68 0.00 0.00 3.18
2268 2315 1.743252 GGTCTTCAAGCTCCTGCGG 60.743 63.158 0.00 0.00 45.42 5.69
2269 2316 2.097038 CGGTCTTCAAGCTCCTGCG 61.097 63.158 0.00 0.00 45.42 5.18
2279 2326 1.823295 GCCATAGGAGCGGTCTTCA 59.177 57.895 15.18 0.11 0.00 3.02
2280 2327 4.760757 GCCATAGGAGCGGTCTTC 57.239 61.111 15.18 0.00 0.00 2.87
2306 2353 1.961180 GACCACGATGGCAGGTAGCT 61.961 60.000 0.00 0.00 42.67 3.32
2317 2364 1.645704 CTGGAGACGACGACCACGAT 61.646 60.000 0.00 0.00 42.66 3.73
2318 2373 2.281002 TGGAGACGACGACCACGA 60.281 61.111 0.00 0.00 42.66 4.35
2321 2376 0.877071 GTTACTGGAGACGACGACCA 59.123 55.000 0.00 7.39 0.00 4.02
2327 2382 0.406750 TGGGAGGTTACTGGAGACGA 59.593 55.000 0.00 0.00 0.00 4.20
2333 2388 2.240162 GAGGCGTGGGAGGTTACTGG 62.240 65.000 0.00 0.00 0.00 4.00
2335 2390 1.988406 GGAGGCGTGGGAGGTTACT 60.988 63.158 0.00 0.00 0.00 2.24
2336 2391 1.957765 GAGGAGGCGTGGGAGGTTAC 61.958 65.000 0.00 0.00 0.00 2.50
2337 2392 1.684734 GAGGAGGCGTGGGAGGTTA 60.685 63.158 0.00 0.00 0.00 2.85
2359 2414 0.731514 GTGTTCGAGACGCCGATCAA 60.732 55.000 0.00 0.00 39.16 2.57
2360 2415 1.154093 GTGTTCGAGACGCCGATCA 60.154 57.895 0.00 0.00 38.45 2.92
2361 2416 3.676742 GTGTTCGAGACGCCGATC 58.323 61.111 0.00 0.00 38.45 3.69
2400 2467 4.064491 GCGCACGCAGACAGTGAC 62.064 66.667 10.65 0.00 41.83 3.67
2403 2470 3.038417 GAAGCGCACGCAGACAGT 61.038 61.111 18.24 0.00 44.88 3.55
2405 2472 3.037833 CTGAAGCGCACGCAGACA 61.038 61.111 18.24 12.23 44.88 3.41
2413 2480 3.241530 AGGTGGACCTGAAGCGCA 61.242 61.111 11.47 0.00 46.55 6.09
2457 2557 3.196463 TGTGCACTGCCATTTCAAAAAG 58.804 40.909 19.41 0.00 0.00 2.27
2461 2563 3.132160 CAAATGTGCACTGCCATTTCAA 58.868 40.909 19.41 0.00 37.34 2.69
2475 2577 5.991328 ATAGTAAGATGTCGGCAAATGTG 57.009 39.130 0.00 0.00 0.00 3.21
2520 2622 6.239120 GCCTAAATGGTCAATGATGCACTAAT 60.239 38.462 0.00 0.00 38.35 1.73
2521 2623 5.067674 GCCTAAATGGTCAATGATGCACTAA 59.932 40.000 0.00 0.00 38.35 2.24
2542 2644 6.901265 GCAAAATGTATCAAAACAATTGCCT 58.099 32.000 5.05 0.00 43.38 4.75
2550 2652 5.915758 TGTACACGGCAAAATGTATCAAAAC 59.084 36.000 0.00 0.00 34.00 2.43
2554 2656 4.515567 TGTTGTACACGGCAAAATGTATCA 59.484 37.500 0.00 0.00 34.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.