Multiple sequence alignment - TraesCS7B01G156000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G156000 chr7B 100.000 5426 0 0 1 5426 210865510 210860085 0.000000e+00 10021.0
1 TraesCS7B01G156000 chr7B 83.171 410 32 19 98 477 591295225 591295627 1.870000e-89 340.0
2 TraesCS7B01G156000 chr7B 85.882 85 11 1 393 477 211938156 211938073 7.490000e-14 89.8
3 TraesCS7B01G156000 chr7B 85.897 78 11 0 400 477 679177276 679177353 3.480000e-12 84.2
4 TraesCS7B01G156000 chr7D 97.224 1693 39 2 2538 4230 234807301 234805617 0.000000e+00 2859.0
5 TraesCS7B01G156000 chr7D 94.820 1699 65 9 852 2539 234809044 234807358 0.000000e+00 2628.0
6 TraesCS7B01G156000 chr7D 90.684 1170 57 11 4255 5408 234805547 234804414 0.000000e+00 1509.0
7 TraesCS7B01G156000 chr7D 87.500 112 13 1 468 578 243804906 243804795 1.590000e-25 128.0
8 TraesCS7B01G156000 chr7A 96.684 1689 48 2 2542 4230 249594973 249593293 0.000000e+00 2802.0
9 TraesCS7B01G156000 chr7A 92.397 1973 94 28 603 2539 249596983 249595031 0.000000e+00 2761.0
10 TraesCS7B01G156000 chr7A 92.366 1179 51 20 4255 5408 249593223 249592059 0.000000e+00 1642.0
11 TraesCS7B01G156000 chr7A 84.211 95 15 0 481 575 258694604 258694698 5.790000e-15 93.5
12 TraesCS7B01G156000 chr4A 86.640 509 24 25 1 478 214473148 214472653 1.730000e-144 523.0
13 TraesCS7B01G156000 chr4A 85.294 102 13 2 474 575 562417208 562417307 2.670000e-18 104.0
14 TraesCS7B01G156000 chr2A 86.100 518 28 25 1 487 524596928 524596424 8.060000e-143 518.0
15 TraesCS7B01G156000 chr2A 88.764 89 7 1 2032 2120 524333403 524333488 7.430000e-19 106.0
16 TraesCS7B01G156000 chr3B 85.714 518 30 25 1 488 777779128 777779631 1.740000e-139 507.0
17 TraesCS7B01G156000 chr3B 91.667 84 6 1 68 151 595623327 595623409 1.240000e-21 115.0
18 TraesCS7B01G156000 chr3B 90.323 62 6 0 1 62 595618401 595618462 1.250000e-11 82.4
19 TraesCS7B01G156000 chr6A 85.571 499 27 26 1 468 466456786 466456302 1.060000e-131 481.0
20 TraesCS7B01G156000 chr6A 88.608 79 9 0 400 478 387662065 387661987 4.470000e-16 97.1
21 TraesCS7B01G156000 chr5D 92.045 88 4 1 2033 2120 442203727 442203811 2.650000e-23 121.0
22 TraesCS7B01G156000 chr5D 85.859 99 14 0 477 575 222523620 222523522 7.430000e-19 106.0
23 TraesCS7B01G156000 chr1D 89.362 94 10 0 481 574 254896309 254896402 9.550000e-23 119.0
24 TraesCS7B01G156000 chr1D 89.773 88 6 1 2033 2120 279101376 279101460 5.750000e-20 110.0
25 TraesCS7B01G156000 chr3A 89.888 89 6 1 2033 2121 491189426 491189511 1.600000e-20 111.0
26 TraesCS7B01G156000 chr3A 87.037 54 5 2 1091 1143 664683541 664683593 5.870000e-05 60.2
27 TraesCS7B01G156000 chr2D 87.500 96 12 0 480 575 552396819 552396724 1.600000e-20 111.0
28 TraesCS7B01G156000 chr6D 89.773 88 6 1 2033 2120 90111817 90111901 5.750000e-20 110.0
29 TraesCS7B01G156000 chr5B 89.773 88 6 1 2033 2120 538397396 538397480 5.750000e-20 110.0
30 TraesCS7B01G156000 chr5B 86.585 82 10 1 400 480 96515149 96515068 7.490000e-14 89.8
31 TraesCS7B01G156000 chr5B 84.270 89 12 1 400 486 402653592 402653504 9.680000e-13 86.1
32 TraesCS7B01G156000 chr6B 83.929 112 17 1 468 578 330410020 330409909 7.430000e-19 106.0
33 TraesCS7B01G156000 chr6B 88.235 85 9 1 393 477 676101134 676101217 3.460000e-17 100.0
34 TraesCS7B01G156000 chr4D 85.567 97 9 2 2033 2129 395380198 395380107 4.470000e-16 97.1
35 TraesCS7B01G156000 chr1B 84.375 96 14 1 392 487 421529093 421528999 5.790000e-15 93.5
36 TraesCS7B01G156000 chr1B 86.420 81 9 1 400 478 100572296 100572216 2.690000e-13 87.9
37 TraesCS7B01G156000 chr4B 89.855 69 7 0 409 477 80870750 80870818 7.490000e-14 89.8
38 TraesCS7B01G156000 chr3D 87.037 54 5 2 1091 1143 531043479 531043531 5.870000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G156000 chr7B 210860085 210865510 5425 True 10021.000000 10021 100.000000 1 5426 1 chr7B.!!$R1 5425
1 TraesCS7B01G156000 chr7D 234804414 234809044 4630 True 2332.000000 2859 94.242667 852 5408 3 chr7D.!!$R2 4556
2 TraesCS7B01G156000 chr7A 249592059 249596983 4924 True 2401.666667 2802 93.815667 603 5408 3 chr7A.!!$R1 4805
3 TraesCS7B01G156000 chr2A 524596424 524596928 504 True 518.000000 518 86.100000 1 487 1 chr2A.!!$R1 486
4 TraesCS7B01G156000 chr3B 777779128 777779631 503 False 507.000000 507 85.714000 1 488 1 chr3B.!!$F3 487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
514 515 0.257039 CTTGCTGCCCCTACTTCCAT 59.743 55.0 0.00 0.0 0.00 3.41 F
1540 1574 0.305922 GATGTTGCATAGTGCTCCGC 59.694 55.0 3.41 0.0 45.31 5.54 F
3058 3173 0.327480 TCCCCATCCCTGCAGTATGT 60.327 55.0 13.81 0.0 39.31 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 1620 0.243907 GAACAGCCAGAGCACGAGTA 59.756 55.0 0.0 0.0 43.56 2.59 R
3137 3252 0.750249 TCACTTCGTTGTCCAGCAGA 59.250 50.0 0.0 0.0 0.00 4.26 R
5006 5252 0.035439 AAGTATGGCTGGGTGAACGG 60.035 55.0 0.0 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.925545 TTACTTACAGTGGTGGTATATTCTAGA 57.074 33.333 0.00 0.00 0.00 2.43
35 36 8.235359 ACTTACAGTGGTGGTATATTCTAGAC 57.765 38.462 0.00 0.00 0.00 2.59
36 37 7.287235 ACTTACAGTGGTGGTATATTCTAGACC 59.713 40.741 0.00 0.00 40.43 3.85
37 38 5.525484 ACAGTGGTGGTATATTCTAGACCA 58.475 41.667 0.00 0.00 46.94 4.02
79 80 8.606830 TCTCAGTATAGAGATATCCTGCTAACA 58.393 37.037 0.00 0.00 39.62 2.41
80 81 9.407380 CTCAGTATAGAGATATCCTGCTAACAT 57.593 37.037 0.00 0.00 37.87 2.71
81 82 9.402320 TCAGTATAGAGATATCCTGCTAACATC 57.598 37.037 0.00 0.00 0.00 3.06
82 83 8.341903 CAGTATAGAGATATCCTGCTAACATCG 58.658 40.741 0.00 0.00 0.00 3.84
83 84 8.050325 AGTATAGAGATATCCTGCTAACATCGT 58.950 37.037 0.00 0.00 0.00 3.73
84 85 5.384063 AGAGATATCCTGCTAACATCGTG 57.616 43.478 0.00 0.00 0.00 4.35
85 86 5.073428 AGAGATATCCTGCTAACATCGTGA 58.927 41.667 0.00 0.00 0.00 4.35
86 87 5.536538 AGAGATATCCTGCTAACATCGTGAA 59.463 40.000 0.00 0.00 0.00 3.18
87 88 6.040955 AGAGATATCCTGCTAACATCGTGAAA 59.959 38.462 0.00 0.00 0.00 2.69
88 89 6.763355 AGATATCCTGCTAACATCGTGAAAT 58.237 36.000 0.00 0.00 0.00 2.17
89 90 7.220030 AGATATCCTGCTAACATCGTGAAATT 58.780 34.615 0.00 0.00 0.00 1.82
90 91 7.716998 AGATATCCTGCTAACATCGTGAAATTT 59.283 33.333 0.00 0.00 0.00 1.82
91 92 8.902540 ATATCCTGCTAACATCGTGAAATTTA 57.097 30.769 0.00 0.00 0.00 1.40
92 93 7.624360 ATCCTGCTAACATCGTGAAATTTAA 57.376 32.000 0.00 0.00 0.00 1.52
93 94 7.441890 TCCTGCTAACATCGTGAAATTTAAA 57.558 32.000 0.00 0.00 0.00 1.52
94 95 7.877003 TCCTGCTAACATCGTGAAATTTAAAA 58.123 30.769 0.00 0.00 0.00 1.52
95 96 7.806014 TCCTGCTAACATCGTGAAATTTAAAAC 59.194 33.333 0.00 0.00 0.00 2.43
96 97 7.593273 CCTGCTAACATCGTGAAATTTAAAACA 59.407 33.333 0.00 0.00 0.00 2.83
97 98 8.858003 TGCTAACATCGTGAAATTTAAAACAA 57.142 26.923 0.00 0.00 0.00 2.83
98 99 8.963130 TGCTAACATCGTGAAATTTAAAACAAG 58.037 29.630 0.00 0.00 0.00 3.16
99 100 7.944649 GCTAACATCGTGAAATTTAAAACAAGC 59.055 33.333 0.00 0.00 0.00 4.01
100 101 7.763172 AACATCGTGAAATTTAAAACAAGCA 57.237 28.000 0.00 0.00 0.00 3.91
101 102 7.160633 ACATCGTGAAATTTAAAACAAGCAC 57.839 32.000 0.00 0.00 0.00 4.40
102 103 5.858159 TCGTGAAATTTAAAACAAGCACG 57.142 34.783 14.89 14.89 46.29 5.34
108 109 8.211838 GTGAAATTTAAAACAAGCACGATTACC 58.788 33.333 0.00 0.00 0.00 2.85
109 110 8.138712 TGAAATTTAAAACAAGCACGATTACCT 58.861 29.630 0.00 0.00 0.00 3.08
110 111 8.880878 AAATTTAAAACAAGCACGATTACCTT 57.119 26.923 0.00 0.00 0.00 3.50
111 112 8.880878 AATTTAAAACAAGCACGATTACCTTT 57.119 26.923 0.00 0.00 0.00 3.11
112 113 8.880878 ATTTAAAACAAGCACGATTACCTTTT 57.119 26.923 0.00 0.00 0.00 2.27
113 114 7.687005 TTAAAACAAGCACGATTACCTTTTG 57.313 32.000 0.00 0.00 0.00 2.44
114 115 4.911514 AACAAGCACGATTACCTTTTGT 57.088 36.364 0.00 0.00 0.00 2.83
115 116 4.223320 ACAAGCACGATTACCTTTTGTG 57.777 40.909 0.00 0.00 0.00 3.33
117 118 2.989422 GCACGATTACCTTTTGTGCT 57.011 45.000 8.27 0.00 46.49 4.40
119 120 4.616181 GCACGATTACCTTTTGTGCTAT 57.384 40.909 8.27 0.00 46.49 2.97
120 121 4.981794 GCACGATTACCTTTTGTGCTATT 58.018 39.130 8.27 0.00 46.49 1.73
121 122 6.114221 GCACGATTACCTTTTGTGCTATTA 57.886 37.500 8.27 0.00 46.49 0.98
122 123 5.963586 GCACGATTACCTTTTGTGCTATTAC 59.036 40.000 8.27 0.00 46.49 1.89
123 124 6.402766 GCACGATTACCTTTTGTGCTATTACA 60.403 38.462 8.27 0.00 46.49 2.41
124 125 7.678690 GCACGATTACCTTTTGTGCTATTACAT 60.679 37.037 8.27 0.00 46.49 2.29
125 126 7.850982 CACGATTACCTTTTGTGCTATTACATC 59.149 37.037 0.00 0.00 0.00 3.06
126 127 7.551262 ACGATTACCTTTTGTGCTATTACATCA 59.449 33.333 0.00 0.00 0.00 3.07
127 128 8.064222 CGATTACCTTTTGTGCTATTACATCAG 58.936 37.037 0.00 0.00 0.00 2.90
128 129 8.807948 ATTACCTTTTGTGCTATTACATCAGT 57.192 30.769 0.00 0.00 0.00 3.41
129 130 6.743575 ACCTTTTGTGCTATTACATCAGTC 57.256 37.500 0.00 0.00 0.00 3.51
130 131 6.476378 ACCTTTTGTGCTATTACATCAGTCT 58.524 36.000 0.00 0.00 0.00 3.24
131 132 6.372659 ACCTTTTGTGCTATTACATCAGTCTG 59.627 38.462 0.00 0.00 0.00 3.51
132 133 5.801350 TTTGTGCTATTACATCAGTCTGC 57.199 39.130 0.00 0.00 0.00 4.26
133 134 3.797039 TGTGCTATTACATCAGTCTGCC 58.203 45.455 0.00 0.00 0.00 4.85
134 135 3.197549 TGTGCTATTACATCAGTCTGCCA 59.802 43.478 0.00 0.00 0.00 4.92
135 136 4.191544 GTGCTATTACATCAGTCTGCCAA 58.808 43.478 0.00 0.00 0.00 4.52
136 137 4.818546 GTGCTATTACATCAGTCTGCCAAT 59.181 41.667 0.00 0.00 0.00 3.16
137 138 5.297776 GTGCTATTACATCAGTCTGCCAATT 59.702 40.000 0.00 0.00 0.00 2.32
138 139 6.483307 GTGCTATTACATCAGTCTGCCAATTA 59.517 38.462 0.00 0.00 0.00 1.40
139 140 7.173907 GTGCTATTACATCAGTCTGCCAATTAT 59.826 37.037 0.00 0.00 0.00 1.28
140 141 7.720957 TGCTATTACATCAGTCTGCCAATTATT 59.279 33.333 0.00 0.00 0.00 1.40
141 142 8.571336 GCTATTACATCAGTCTGCCAATTATTT 58.429 33.333 0.00 0.00 0.00 1.40
142 143 9.888878 CTATTACATCAGTCTGCCAATTATTTG 57.111 33.333 0.00 0.00 0.00 2.32
143 144 7.701539 TTACATCAGTCTGCCAATTATTTGT 57.298 32.000 0.00 0.00 0.00 2.83
144 145 8.800370 TTACATCAGTCTGCCAATTATTTGTA 57.200 30.769 0.00 0.00 0.00 2.41
145 146 7.325660 ACATCAGTCTGCCAATTATTTGTAG 57.674 36.000 0.00 0.00 0.00 2.74
146 147 7.112122 ACATCAGTCTGCCAATTATTTGTAGA 58.888 34.615 0.00 0.00 0.00 2.59
147 148 7.776969 ACATCAGTCTGCCAATTATTTGTAGAT 59.223 33.333 0.83 0.00 31.20 1.98
148 149 8.627403 CATCAGTCTGCCAATTATTTGTAGATT 58.373 33.333 0.83 0.00 31.20 2.40
149 150 8.579850 TCAGTCTGCCAATTATTTGTAGATTT 57.420 30.769 0.83 0.00 31.20 2.17
150 151 9.679661 TCAGTCTGCCAATTATTTGTAGATTTA 57.320 29.630 0.83 0.00 31.20 1.40
178 179 9.733556 TGAAATATACACATACCATATGGGAAC 57.266 33.333 25.55 0.00 41.15 3.62
179 180 9.959721 GAAATATACACATACCATATGGGAACT 57.040 33.333 25.55 7.25 41.15 3.01
183 184 6.763715 ACACATACCATATGGGAACTATGT 57.236 37.500 25.55 23.20 41.15 2.29
184 185 7.149202 ACACATACCATATGGGAACTATGTT 57.851 36.000 25.55 15.37 41.15 2.71
185 186 7.582719 ACACATACCATATGGGAACTATGTTT 58.417 34.615 25.55 17.91 41.15 2.83
186 187 8.719596 ACACATACCATATGGGAACTATGTTTA 58.280 33.333 25.55 5.36 41.15 2.01
187 188 9.567776 CACATACCATATGGGAACTATGTTTAA 57.432 33.333 25.55 0.00 41.15 1.52
206 207 8.121167 TGTTTAATTTTCAAAAAGTACCAGCG 57.879 30.769 0.00 0.00 29.41 5.18
207 208 7.222999 TGTTTAATTTTCAAAAAGTACCAGCGG 59.777 33.333 0.00 0.00 29.41 5.52
208 209 5.523438 AATTTTCAAAAAGTACCAGCGGA 57.477 34.783 1.50 0.00 0.00 5.54
209 210 5.722021 ATTTTCAAAAAGTACCAGCGGAT 57.278 34.783 1.50 0.00 0.00 4.18
210 211 6.827586 ATTTTCAAAAAGTACCAGCGGATA 57.172 33.333 1.50 0.00 0.00 2.59
211 212 6.636562 TTTTCAAAAAGTACCAGCGGATAA 57.363 33.333 1.50 0.00 0.00 1.75
212 213 6.827586 TTTCAAAAAGTACCAGCGGATAAT 57.172 33.333 1.50 0.00 0.00 1.28
213 214 7.925043 TTTCAAAAAGTACCAGCGGATAATA 57.075 32.000 1.50 0.00 0.00 0.98
214 215 8.514330 TTTCAAAAAGTACCAGCGGATAATAT 57.486 30.769 1.50 0.00 0.00 1.28
215 216 8.514330 TTCAAAAAGTACCAGCGGATAATATT 57.486 30.769 1.50 0.00 0.00 1.28
216 217 9.616156 TTCAAAAAGTACCAGCGGATAATATTA 57.384 29.630 0.00 0.00 0.00 0.98
217 218 9.787435 TCAAAAAGTACCAGCGGATAATATTAT 57.213 29.630 7.72 7.72 0.00 1.28
223 224 9.745880 AGTACCAGCGGATAATATTATTATTCG 57.254 33.333 23.90 23.90 36.67 3.34
224 225 9.525409 GTACCAGCGGATAATATTATTATTCGT 57.475 33.333 26.55 16.46 36.15 3.85
225 226 8.644318 ACCAGCGGATAATATTATTATTCGTC 57.356 34.615 26.55 20.98 36.15 4.20
226 227 8.255206 ACCAGCGGATAATATTATTATTCGTCA 58.745 33.333 26.55 0.00 36.15 4.35
227 228 8.755941 CCAGCGGATAATATTATTATTCGTCAG 58.244 37.037 26.55 19.38 36.15 3.51
228 229 9.516314 CAGCGGATAATATTATTATTCGTCAGA 57.484 33.333 26.55 0.00 36.15 3.27
238 239 8.911247 ATTATTATTCGTCAGAAAAAGGCAAC 57.089 30.769 0.00 0.00 40.15 4.17
239 240 6.575162 ATTATTCGTCAGAAAAAGGCAACT 57.425 33.333 0.00 0.00 45.58 3.16
240 241 7.681939 ATTATTCGTCAGAAAAAGGCAACTA 57.318 32.000 0.00 0.00 43.63 2.24
241 242 7.499321 TTATTCGTCAGAAAAAGGCAACTAA 57.501 32.000 0.00 0.00 43.63 2.24
242 243 5.821516 TTCGTCAGAAAAAGGCAACTAAA 57.178 34.783 0.00 0.00 38.98 1.85
243 244 6.385649 TTCGTCAGAAAAAGGCAACTAAAT 57.614 33.333 0.00 0.00 38.98 1.40
244 245 6.801575 TTCGTCAGAAAAAGGCAACTAAATT 58.198 32.000 0.00 0.00 38.98 1.82
245 246 7.262048 TTCGTCAGAAAAAGGCAACTAAATTT 58.738 30.769 0.00 0.00 38.98 1.82
246 247 8.407064 TTCGTCAGAAAAAGGCAACTAAATTTA 58.593 29.630 0.00 0.00 38.98 1.40
291 292 3.997021 GTCCTATTGACAATAGATGGGCG 59.003 47.826 29.07 15.41 42.80 6.13
292 293 3.646162 TCCTATTGACAATAGATGGGCGT 59.354 43.478 29.07 0.00 42.80 5.68
293 294 4.836175 TCCTATTGACAATAGATGGGCGTA 59.164 41.667 29.07 7.64 42.80 4.42
294 295 5.047306 TCCTATTGACAATAGATGGGCGTAG 60.047 44.000 29.07 13.70 42.80 3.51
314 315 3.641437 GCAACTTGCATACCACTCAAA 57.359 42.857 8.97 0.00 44.26 2.69
315 316 4.178545 GCAACTTGCATACCACTCAAAT 57.821 40.909 8.97 0.00 44.26 2.32
316 317 4.559153 GCAACTTGCATACCACTCAAATT 58.441 39.130 8.97 0.00 44.26 1.82
317 318 4.622740 GCAACTTGCATACCACTCAAATTC 59.377 41.667 8.97 0.00 44.26 2.17
318 319 5.163513 CAACTTGCATACCACTCAAATTCC 58.836 41.667 0.00 0.00 0.00 3.01
319 320 4.666512 ACTTGCATACCACTCAAATTCCT 58.333 39.130 0.00 0.00 0.00 3.36
320 321 4.702131 ACTTGCATACCACTCAAATTCCTC 59.298 41.667 0.00 0.00 0.00 3.71
321 322 4.574674 TGCATACCACTCAAATTCCTCT 57.425 40.909 0.00 0.00 0.00 3.69
322 323 4.517285 TGCATACCACTCAAATTCCTCTC 58.483 43.478 0.00 0.00 0.00 3.20
323 324 4.225942 TGCATACCACTCAAATTCCTCTCT 59.774 41.667 0.00 0.00 0.00 3.10
324 325 5.425217 TGCATACCACTCAAATTCCTCTCTA 59.575 40.000 0.00 0.00 0.00 2.43
325 326 6.070251 TGCATACCACTCAAATTCCTCTCTAA 60.070 38.462 0.00 0.00 0.00 2.10
326 327 6.995091 GCATACCACTCAAATTCCTCTCTAAT 59.005 38.462 0.00 0.00 0.00 1.73
327 328 7.500559 GCATACCACTCAAATTCCTCTCTAATT 59.499 37.037 0.00 0.00 0.00 1.40
330 331 8.380742 ACCACTCAAATTCCTCTCTAATTAGA 57.619 34.615 14.42 14.42 0.00 2.10
331 332 8.997734 ACCACTCAAATTCCTCTCTAATTAGAT 58.002 33.333 15.47 0.00 0.00 1.98
377 378 8.677148 AAGACAAGCATAAGTTACAAGAAAGA 57.323 30.769 0.00 0.00 0.00 2.52
378 379 8.677148 AGACAAGCATAAGTTACAAGAAAGAA 57.323 30.769 0.00 0.00 0.00 2.52
379 380 9.120538 AGACAAGCATAAGTTACAAGAAAGAAA 57.879 29.630 0.00 0.00 0.00 2.52
380 381 9.730420 GACAAGCATAAGTTACAAGAAAGAAAA 57.270 29.630 0.00 0.00 0.00 2.29
391 392 9.290483 GTTACAAGAAAGAAAAAGAACTTGAGG 57.710 33.333 0.00 0.00 38.30 3.86
392 393 7.703058 ACAAGAAAGAAAAAGAACTTGAGGA 57.297 32.000 0.00 0.00 38.30 3.71
393 394 8.122472 ACAAGAAAGAAAAAGAACTTGAGGAA 57.878 30.769 0.00 0.00 38.30 3.36
394 395 8.585018 ACAAGAAAGAAAAAGAACTTGAGGAAA 58.415 29.630 0.00 0.00 38.30 3.13
395 396 9.591792 CAAGAAAGAAAAAGAACTTGAGGAAAT 57.408 29.630 0.00 0.00 37.49 2.17
397 398 9.591792 AGAAAGAAAAAGAACTTGAGGAAATTG 57.408 29.630 0.00 0.00 0.00 2.32
398 399 7.776933 AAGAAAAAGAACTTGAGGAAATTGC 57.223 32.000 0.00 0.00 0.00 3.56
399 400 6.877236 AGAAAAAGAACTTGAGGAAATTGCA 58.123 32.000 0.00 0.00 0.00 4.08
400 401 7.503549 AGAAAAAGAACTTGAGGAAATTGCAT 58.496 30.769 0.00 0.00 0.00 3.96
401 402 8.641541 AGAAAAAGAACTTGAGGAAATTGCATA 58.358 29.630 0.00 0.00 0.00 3.14
402 403 9.428097 GAAAAAGAACTTGAGGAAATTGCATAT 57.572 29.630 0.00 0.00 0.00 1.78
434 435 9.620259 ATTTTATATGCCTAATAGCTAAGAGCC 57.380 33.333 0.00 0.00 43.77 4.70
435 436 7.733773 TTATATGCCTAATAGCTAAGAGCCA 57.266 36.000 0.00 0.00 43.77 4.75
436 437 4.982241 ATGCCTAATAGCTAAGAGCCAA 57.018 40.909 0.00 0.00 43.77 4.52
437 438 4.771114 TGCCTAATAGCTAAGAGCCAAA 57.229 40.909 0.00 0.00 43.77 3.28
438 439 5.110814 TGCCTAATAGCTAAGAGCCAAAA 57.889 39.130 0.00 0.00 43.77 2.44
439 440 4.881850 TGCCTAATAGCTAAGAGCCAAAAC 59.118 41.667 0.00 0.00 43.77 2.43
440 441 4.881850 GCCTAATAGCTAAGAGCCAAAACA 59.118 41.667 0.00 0.00 43.77 2.83
441 442 5.008118 GCCTAATAGCTAAGAGCCAAAACAG 59.992 44.000 0.00 0.00 43.77 3.16
442 443 6.349300 CCTAATAGCTAAGAGCCAAAACAGA 58.651 40.000 0.00 0.00 43.77 3.41
443 444 6.995091 CCTAATAGCTAAGAGCCAAAACAGAT 59.005 38.462 0.00 0.00 43.77 2.90
444 445 6.690194 AATAGCTAAGAGCCAAAACAGATG 57.310 37.500 0.00 0.00 43.77 2.90
445 446 3.350833 AGCTAAGAGCCAAAACAGATGG 58.649 45.455 0.00 0.00 43.77 3.51
446 447 2.424956 GCTAAGAGCCAAAACAGATGGG 59.575 50.000 0.00 0.00 38.44 4.00
447 448 1.260544 AAGAGCCAAAACAGATGGGC 58.739 50.000 0.00 0.00 46.77 5.36
449 450 2.125952 GCCAAAACAGATGGGCGC 60.126 61.111 0.00 0.00 38.44 6.53
450 451 2.929903 GCCAAAACAGATGGGCGCA 61.930 57.895 10.83 5.70 38.44 6.09
451 452 1.213537 CCAAAACAGATGGGCGCAG 59.786 57.895 10.83 0.00 34.15 5.18
468 469 4.834892 GCAACGCGCGCCATCAAT 62.835 61.111 32.58 5.07 0.00 2.57
469 470 2.945576 CAACGCGCGCCATCAATG 60.946 61.111 32.58 12.27 0.00 2.82
470 471 3.124270 AACGCGCGCCATCAATGA 61.124 55.556 32.58 0.00 0.00 2.57
471 472 2.472059 AACGCGCGCCATCAATGAT 61.472 52.632 32.58 2.28 0.00 2.45
472 473 2.127496 CGCGCGCCATCAATGATC 60.127 61.111 27.72 0.00 0.00 2.92
473 474 2.601398 CGCGCGCCATCAATGATCT 61.601 57.895 27.72 0.00 0.00 2.75
474 475 1.284297 CGCGCGCCATCAATGATCTA 61.284 55.000 27.72 0.00 0.00 1.98
475 476 0.441533 GCGCGCCATCAATGATCTAG 59.558 55.000 23.24 0.00 0.00 2.43
476 477 1.788258 CGCGCCATCAATGATCTAGT 58.212 50.000 0.00 0.00 0.00 2.57
477 478 1.458445 CGCGCCATCAATGATCTAGTG 59.542 52.381 0.00 0.00 0.00 2.74
478 479 1.802960 GCGCCATCAATGATCTAGTGG 59.197 52.381 0.00 0.00 0.00 4.00
479 480 2.548707 GCGCCATCAATGATCTAGTGGA 60.549 50.000 0.00 0.00 0.00 4.02
480 481 3.867600 GCGCCATCAATGATCTAGTGGAT 60.868 47.826 0.00 0.00 37.37 3.41
481 482 4.621510 GCGCCATCAATGATCTAGTGGATA 60.622 45.833 0.00 0.00 34.33 2.59
482 483 5.668471 CGCCATCAATGATCTAGTGGATAT 58.332 41.667 4.16 0.00 34.33 1.63
483 484 6.683861 GCGCCATCAATGATCTAGTGGATATA 60.684 42.308 0.00 0.00 34.33 0.86
484 485 7.267857 CGCCATCAATGATCTAGTGGATATAA 58.732 38.462 4.16 0.00 34.33 0.98
485 486 7.930325 CGCCATCAATGATCTAGTGGATATAAT 59.070 37.037 4.16 0.00 34.33 1.28
493 494 9.722184 ATGATCTAGTGGATATAATATGCATGC 57.278 33.333 11.82 11.82 34.33 4.06
494 495 7.869429 TGATCTAGTGGATATAATATGCATGCG 59.131 37.037 14.09 0.00 34.33 4.73
495 496 5.985530 TCTAGTGGATATAATATGCATGCGC 59.014 40.000 14.09 0.00 39.24 6.09
496 497 4.774124 AGTGGATATAATATGCATGCGCT 58.226 39.130 14.09 5.45 39.64 5.92
497 498 5.188434 AGTGGATATAATATGCATGCGCTT 58.812 37.500 14.09 8.70 39.64 4.68
498 499 5.065602 AGTGGATATAATATGCATGCGCTTG 59.934 40.000 18.27 18.27 39.64 4.01
499 500 4.201940 TGGATATAATATGCATGCGCTTGC 60.202 41.667 34.02 34.02 43.07 4.01
500 501 4.036027 GGATATAATATGCATGCGCTTGCT 59.964 41.667 37.63 27.68 43.18 3.91
501 502 2.691984 TAATATGCATGCGCTTGCTG 57.308 45.000 37.63 19.17 43.18 4.41
502 503 0.596600 AATATGCATGCGCTTGCTGC 60.597 50.000 37.63 26.32 43.18 5.25
503 504 2.416244 ATATGCATGCGCTTGCTGCC 62.416 55.000 37.63 17.75 43.18 4.85
507 508 4.113815 ATGCGCTTGCTGCCCCTA 62.114 61.111 9.73 0.00 40.12 3.53
509 510 4.785453 GCGCTTGCTGCCCCTACT 62.785 66.667 0.00 0.00 38.78 2.57
510 511 2.045926 CGCTTGCTGCCCCTACTT 60.046 61.111 0.00 0.00 38.78 2.24
511 512 2.109126 CGCTTGCTGCCCCTACTTC 61.109 63.158 0.00 0.00 38.78 3.01
512 513 1.750780 GCTTGCTGCCCCTACTTCC 60.751 63.158 0.00 0.00 35.15 3.46
513 514 1.685224 CTTGCTGCCCCTACTTCCA 59.315 57.895 0.00 0.00 0.00 3.53
514 515 0.257039 CTTGCTGCCCCTACTTCCAT 59.743 55.000 0.00 0.00 0.00 3.41
515 516 0.704076 TTGCTGCCCCTACTTCCATT 59.296 50.000 0.00 0.00 0.00 3.16
516 517 0.704076 TGCTGCCCCTACTTCCATTT 59.296 50.000 0.00 0.00 0.00 2.32
517 518 1.919654 TGCTGCCCCTACTTCCATTTA 59.080 47.619 0.00 0.00 0.00 1.40
518 519 2.298610 GCTGCCCCTACTTCCATTTAC 58.701 52.381 0.00 0.00 0.00 2.01
519 520 2.092375 GCTGCCCCTACTTCCATTTACT 60.092 50.000 0.00 0.00 0.00 2.24
520 521 3.135895 GCTGCCCCTACTTCCATTTACTA 59.864 47.826 0.00 0.00 0.00 1.82
521 522 4.202472 GCTGCCCCTACTTCCATTTACTAT 60.202 45.833 0.00 0.00 0.00 2.12
522 523 5.304686 TGCCCCTACTTCCATTTACTATG 57.695 43.478 0.00 0.00 0.00 2.23
523 524 4.972568 TGCCCCTACTTCCATTTACTATGA 59.027 41.667 0.00 0.00 0.00 2.15
524 525 5.071788 TGCCCCTACTTCCATTTACTATGAG 59.928 44.000 0.00 0.00 0.00 2.90
525 526 5.307196 GCCCCTACTTCCATTTACTATGAGA 59.693 44.000 0.00 0.00 0.00 3.27
526 527 6.519213 GCCCCTACTTCCATTTACTATGAGAG 60.519 46.154 0.00 0.00 0.00 3.20
527 528 6.782988 CCCCTACTTCCATTTACTATGAGAGA 59.217 42.308 0.00 0.00 0.00 3.10
528 529 7.039363 CCCCTACTTCCATTTACTATGAGAGAG 60.039 44.444 0.00 0.00 0.00 3.20
529 530 7.039363 CCCTACTTCCATTTACTATGAGAGAGG 60.039 44.444 0.00 0.00 0.00 3.69
530 531 7.726291 CCTACTTCCATTTACTATGAGAGAGGA 59.274 40.741 0.00 0.00 0.00 3.71
531 532 7.979786 ACTTCCATTTACTATGAGAGAGGAA 57.020 36.000 0.00 0.00 0.00 3.36
532 533 7.787028 ACTTCCATTTACTATGAGAGAGGAAC 58.213 38.462 0.00 0.00 0.00 3.62
533 534 6.732896 TCCATTTACTATGAGAGAGGAACC 57.267 41.667 0.00 0.00 0.00 3.62
534 535 6.202331 TCCATTTACTATGAGAGAGGAACCA 58.798 40.000 0.00 0.00 0.00 3.67
535 536 6.846505 TCCATTTACTATGAGAGAGGAACCAT 59.153 38.462 0.00 0.00 0.00 3.55
536 537 6.933521 CCATTTACTATGAGAGAGGAACCATG 59.066 42.308 0.00 0.00 0.00 3.66
537 538 7.419518 CCATTTACTATGAGAGAGGAACCATGT 60.420 40.741 0.00 0.00 0.00 3.21
538 539 6.716934 TTACTATGAGAGAGGAACCATGTC 57.283 41.667 0.00 0.00 0.00 3.06
539 540 4.877773 ACTATGAGAGAGGAACCATGTCT 58.122 43.478 0.00 0.00 0.00 3.41
540 541 6.019656 ACTATGAGAGAGGAACCATGTCTA 57.980 41.667 0.00 0.00 0.00 2.59
541 542 5.830991 ACTATGAGAGAGGAACCATGTCTAC 59.169 44.000 0.00 0.00 0.00 2.59
542 543 4.047627 TGAGAGAGGAACCATGTCTACA 57.952 45.455 0.00 0.00 0.00 2.74
543 544 3.764434 TGAGAGAGGAACCATGTCTACAC 59.236 47.826 0.00 0.00 0.00 2.90
544 545 3.100671 AGAGAGGAACCATGTCTACACC 58.899 50.000 0.00 0.00 0.00 4.16
545 546 3.100671 GAGAGGAACCATGTCTACACCT 58.899 50.000 0.00 0.00 0.00 4.00
546 547 3.515901 GAGAGGAACCATGTCTACACCTT 59.484 47.826 0.00 0.00 0.00 3.50
547 548 3.910627 AGAGGAACCATGTCTACACCTTT 59.089 43.478 0.00 0.00 0.00 3.11
548 549 4.020128 AGAGGAACCATGTCTACACCTTTC 60.020 45.833 0.00 0.00 0.00 2.62
549 550 3.910627 AGGAACCATGTCTACACCTTTCT 59.089 43.478 0.00 0.00 0.00 2.52
550 551 5.091552 AGGAACCATGTCTACACCTTTCTA 58.908 41.667 0.00 0.00 0.00 2.10
551 552 5.726793 AGGAACCATGTCTACACCTTTCTAT 59.273 40.000 0.00 0.00 0.00 1.98
552 553 5.817816 GGAACCATGTCTACACCTTTCTATG 59.182 44.000 0.00 0.00 0.00 2.23
553 554 6.374417 AACCATGTCTACACCTTTCTATGT 57.626 37.500 0.00 0.00 0.00 2.29
554 555 6.374417 ACCATGTCTACACCTTTCTATGTT 57.626 37.500 0.00 0.00 0.00 2.71
555 556 6.779860 ACCATGTCTACACCTTTCTATGTTT 58.220 36.000 0.00 0.00 0.00 2.83
556 557 6.879458 ACCATGTCTACACCTTTCTATGTTTC 59.121 38.462 0.00 0.00 0.00 2.78
557 558 7.106239 CCATGTCTACACCTTTCTATGTTTCT 58.894 38.462 0.00 0.00 0.00 2.52
558 559 8.258007 CCATGTCTACACCTTTCTATGTTTCTA 58.742 37.037 0.00 0.00 0.00 2.10
559 560 9.653287 CATGTCTACACCTTTCTATGTTTCTAA 57.347 33.333 0.00 0.00 0.00 2.10
598 599 1.082690 GCTCCAGCACTAAACTCTGC 58.917 55.000 0.00 0.00 41.59 4.26
599 600 1.731720 CTCCAGCACTAAACTCTGCC 58.268 55.000 0.00 0.00 33.57 4.85
600 601 0.324943 TCCAGCACTAAACTCTGCCC 59.675 55.000 0.00 0.00 33.57 5.36
601 602 0.678048 CCAGCACTAAACTCTGCCCC 60.678 60.000 0.00 0.00 33.57 5.80
610 611 2.045536 CTCTGCCCCAGCCTGTTC 60.046 66.667 0.00 0.00 38.69 3.18
621 622 2.171237 CCAGCCTGTTCATGTCATCCTA 59.829 50.000 0.00 0.00 0.00 2.94
622 623 3.464907 CAGCCTGTTCATGTCATCCTAG 58.535 50.000 0.00 0.00 0.00 3.02
660 661 0.328926 AAAAATCCTCCGGCCCGTAA 59.671 50.000 0.85 0.00 0.00 3.18
669 670 1.219664 CGGCCCGTAAGAATGGACA 59.780 57.895 0.00 0.00 43.02 4.02
683 684 2.048127 GACAGAGACACGGCCCAC 60.048 66.667 0.00 0.00 0.00 4.61
684 685 2.524394 ACAGAGACACGGCCCACT 60.524 61.111 0.00 0.00 0.00 4.00
712 713 1.885850 AGCTTTTCGTCCAACGCGT 60.886 52.632 5.58 5.58 42.21 6.01
757 759 1.211709 GCAATAGCCGGCAAACGTT 59.788 52.632 31.54 9.39 42.24 3.99
763 765 2.852180 GCCGGCAAACGTTCCCTTT 61.852 57.895 24.80 0.00 42.24 3.11
775 777 3.716872 ACGTTCCCTTTGGAGGATGATAT 59.283 43.478 0.00 0.00 46.74 1.63
779 781 4.473444 TCCCTTTGGAGGATGATATTTGC 58.527 43.478 0.00 0.00 46.74 3.68
788 792 7.289310 TGGAGGATGATATTTGCACATTTCTA 58.711 34.615 5.15 0.00 0.00 2.10
887 913 7.201617 GCTATCTACCCGCAACATAAAATATCC 60.202 40.741 0.00 0.00 0.00 2.59
889 915 3.227614 ACCCGCAACATAAAATATCCCC 58.772 45.455 0.00 0.00 0.00 4.81
949 975 5.155278 TGAGAAGCATTACCGTTTCCTTA 57.845 39.130 0.00 0.00 0.00 2.69
1105 1131 4.455137 AGGATGGGGGTCCTGGGG 62.455 72.222 0.00 0.00 46.76 4.96
1532 1566 4.318333 CGGAAGTCGATTGATGTTGCATAG 60.318 45.833 0.00 0.00 42.43 2.23
1540 1574 0.305922 GATGTTGCATAGTGCTCCGC 59.694 55.000 3.41 0.00 45.31 5.54
1578 1612 2.802247 GCAACACCTTTGGCAATTTCTC 59.198 45.455 0.00 0.00 0.00 2.87
1586 1620 0.890542 TGGCAATTTCTCTGCGCTGT 60.891 50.000 9.73 0.00 40.88 4.40
1619 1653 2.415893 GGCTGTTCATGTTGTACCATGC 60.416 50.000 7.11 0.00 41.60 4.06
1665 1699 7.117812 CGTCTTCAAATTTAGGAGAAGCTTGTA 59.882 37.037 2.10 0.00 37.86 2.41
1721 1755 4.502105 AAAAATGGCTCAAGGTTTTGGT 57.498 36.364 0.00 0.00 34.97 3.67
1768 1802 3.319122 GGTTCCTCAGTTCTTGCATTTGT 59.681 43.478 0.00 0.00 0.00 2.83
1773 1807 2.357323 TCAGTTCTTGCATTTGTGCGAA 59.643 40.909 0.00 0.00 37.69 4.70
1798 1838 2.413371 GCGCAATCTCAAGAGTTTGGTC 60.413 50.000 17.76 6.00 38.13 4.02
1911 1951 0.437295 GTAGCAACCGTACGTGCAAG 59.563 55.000 26.43 9.79 0.00 4.01
2093 2139 2.912771 TCATGGTGTCAACAAACGTCT 58.087 42.857 0.00 0.00 0.00 4.18
2094 2140 3.275143 TCATGGTGTCAACAAACGTCTT 58.725 40.909 0.00 0.00 0.00 3.01
2095 2141 3.311322 TCATGGTGTCAACAAACGTCTTC 59.689 43.478 0.00 0.00 0.00 2.87
2208 2254 8.463930 TGAAGGATTGAAGTTGATTTTGTAGT 57.536 30.769 0.00 0.00 0.00 2.73
2209 2255 9.567776 TGAAGGATTGAAGTTGATTTTGTAGTA 57.432 29.630 0.00 0.00 0.00 1.82
2210 2256 9.827411 GAAGGATTGAAGTTGATTTTGTAGTAC 57.173 33.333 0.00 0.00 0.00 2.73
2211 2257 8.918202 AGGATTGAAGTTGATTTTGTAGTACA 57.082 30.769 0.00 0.00 0.00 2.90
2212 2258 9.520515 AGGATTGAAGTTGATTTTGTAGTACAT 57.479 29.630 3.28 0.00 0.00 2.29
2261 2307 1.251527 ACCTCACCGCTCTGTACAGG 61.252 60.000 22.48 13.97 0.00 4.00
2329 2375 5.489792 TCAATGGGAGGTAATATCTGCTC 57.510 43.478 0.00 0.00 0.00 4.26
2356 2402 5.016831 GTGGTCCTTGGTTCCATTTATTCT 58.983 41.667 8.76 0.00 33.68 2.40
2362 2408 5.294552 CCTTGGTTCCATTTATTCTCTCGAC 59.705 44.000 0.00 0.00 0.00 4.20
2364 2410 5.419542 TGGTTCCATTTATTCTCTCGACTG 58.580 41.667 0.00 0.00 0.00 3.51
2476 2525 5.642919 ACAGTCCAACAACGTTTGTAACTTA 59.357 36.000 0.00 0.00 44.59 2.24
2500 2549 7.964545 AGTTGTACGAATTCTTTGAACAAAC 57.035 32.000 3.52 0.00 0.00 2.93
2501 2550 6.685403 AGTTGTACGAATTCTTTGAACAAACG 59.315 34.615 3.52 0.00 0.00 3.60
2623 2738 6.909550 TGGCATTTTTACCAGTTCTACATT 57.090 33.333 0.00 0.00 0.00 2.71
2650 2765 7.651808 TGTTTCTTCATTTCAGGTTCTTCATC 58.348 34.615 0.00 0.00 0.00 2.92
2701 2816 1.475751 GGGCTTGATGTCGTGGATGAT 60.476 52.381 0.00 0.00 0.00 2.45
2705 2820 2.820059 TGATGTCGTGGATGATAGCC 57.180 50.000 0.00 0.00 0.00 3.93
2802 2917 0.754957 CTCCTGGGCCACACAAACAA 60.755 55.000 0.00 0.00 0.00 2.83
3058 3173 0.327480 TCCCCATCCCTGCAGTATGT 60.327 55.000 13.81 0.00 39.31 2.29
3137 3252 3.810743 GCCCCCTGCACGATTAATATCTT 60.811 47.826 0.00 0.00 40.77 2.40
3138 3253 4.003648 CCCCCTGCACGATTAATATCTTC 58.996 47.826 0.00 0.00 0.00 2.87
3139 3254 4.263068 CCCCCTGCACGATTAATATCTTCT 60.263 45.833 0.00 0.00 0.00 2.85
3574 3692 1.888512 GAAAACTGCTGGAATGAGGCA 59.111 47.619 0.00 0.00 34.66 4.75
3616 3734 4.384056 CGGCAATATCAGAACAAGGAGAT 58.616 43.478 0.00 0.00 0.00 2.75
3688 3806 4.706962 ACTATGGAAAGCAGAAACATTCCC 59.293 41.667 0.00 0.00 40.49 3.97
3841 3959 1.199624 GAAAACCACACTTGCAAGCG 58.800 50.000 26.27 19.55 0.00 4.68
3978 4096 3.973973 TCCAAGTGGATTACCTGATAGGG 59.026 47.826 0.00 0.00 38.46 3.53
3982 4100 3.210074 AGTGGATTACCTGATAGGGTCCT 59.790 47.826 13.60 0.00 40.58 3.85
3986 4104 2.653234 TACCTGATAGGGTCCTCGTC 57.347 55.000 0.00 0.00 40.58 4.20
4106 4279 2.673833 AGCTGTAAACTACGTGCTGAC 58.326 47.619 0.00 0.00 38.82 3.51
4206 4379 9.653287 CGAATTATCACCAGAAATATAGCCTTA 57.347 33.333 0.00 0.00 0.00 2.69
4230 4403 2.059541 GTTTCAGTCAGGTACGCTGTC 58.940 52.381 10.08 6.06 0.00 3.51
4246 4472 0.178967 TGTCCAGGAATGCTTTGCCA 60.179 50.000 0.00 0.00 0.00 4.92
4247 4473 0.244721 GTCCAGGAATGCTTTGCCAC 59.755 55.000 0.00 0.00 0.00 5.01
4248 4474 0.178967 TCCAGGAATGCTTTGCCACA 60.179 50.000 0.00 0.00 0.00 4.17
4249 4475 0.245539 CCAGGAATGCTTTGCCACAG 59.754 55.000 0.00 0.00 0.00 3.66
4250 4476 0.245539 CAGGAATGCTTTGCCACAGG 59.754 55.000 0.00 0.00 0.00 4.00
4313 4539 2.159099 TCTGTCAGCCGAATAAGCGAAT 60.159 45.455 0.00 0.00 34.64 3.34
4338 4564 6.495181 TGGCTCCATGTTTTCTAAAACCAATA 59.505 34.615 14.08 0.00 45.82 1.90
4344 4570 8.364142 CCATGTTTTCTAAAACCAATACCTTCA 58.636 33.333 14.08 0.00 45.82 3.02
4363 4589 2.489329 TCATGTTTTGCAAGCTAGAGCC 59.511 45.455 0.00 0.00 43.38 4.70
4368 4594 4.141959 TGTTTTGCAAGCTAGAGCCTTTTT 60.142 37.500 0.00 0.00 43.38 1.94
4437 4676 4.500837 CGTTGAGTCGAGATCTTTGTATGG 59.499 45.833 0.00 0.00 0.00 2.74
4442 4681 6.071334 TGAGTCGAGATCTTTGTATGGTTCTT 60.071 38.462 0.00 0.00 0.00 2.52
4443 4682 6.702329 AGTCGAGATCTTTGTATGGTTCTTT 58.298 36.000 0.00 0.00 0.00 2.52
4444 4683 7.162082 AGTCGAGATCTTTGTATGGTTCTTTT 58.838 34.615 0.00 0.00 0.00 2.27
4445 4684 7.661847 AGTCGAGATCTTTGTATGGTTCTTTTT 59.338 33.333 0.00 0.00 0.00 1.94
4473 4713 4.887071 TGTGTGTGGTCTAAAAGAAATGCT 59.113 37.500 0.00 0.00 0.00 3.79
4578 4819 5.836347 TGCACTACACTAGAAGAGCATATG 58.164 41.667 0.00 0.00 0.00 1.78
4579 4820 5.594317 TGCACTACACTAGAAGAGCATATGA 59.406 40.000 6.97 0.00 0.00 2.15
4587 4828 7.497249 ACACTAGAAGAGCATATGACATTTTCC 59.503 37.037 6.97 0.00 0.00 3.13
4607 4848 5.055642 TCCTGTACTAGACGAACACATTG 57.944 43.478 0.00 0.00 0.00 2.82
4618 4859 3.625313 ACGAACACATTGTCACAACATGA 59.375 39.130 9.38 0.00 34.73 3.07
4619 4860 4.275689 ACGAACACATTGTCACAACATGAT 59.724 37.500 9.38 0.00 40.28 2.45
4625 4866 4.696877 ACATTGTCACAACATGATGATCGT 59.303 37.500 10.29 0.00 40.28 3.73
4655 4897 0.386731 CCGCGTGGACAAATTTGGAC 60.387 55.000 21.74 13.96 37.49 4.02
4845 5089 2.100631 CAAGATCGTGCGGACCACC 61.101 63.158 0.00 0.00 41.53 4.61
4905 5149 4.753662 ACGCGAGCCCACCCTCTA 62.754 66.667 15.93 0.00 0.00 2.43
4968 5212 3.950254 CCGATCGACCCCGTCTCG 61.950 72.222 18.66 0.00 39.64 4.04
4969 5213 3.200593 CGATCGACCCCGTCTCGT 61.201 66.667 10.26 0.00 37.31 4.18
5006 5252 0.831307 ATCCGGTAGCTGTTCTTCCC 59.169 55.000 0.00 0.00 0.00 3.97
5007 5253 1.221021 CCGGTAGCTGTTCTTCCCC 59.779 63.158 0.00 0.00 0.00 4.81
5248 5501 1.478510 GTCCTCTTCTTCCTCATCGCA 59.521 52.381 0.00 0.00 0.00 5.10
5284 5537 4.077184 CTCGTAAGCCCGCACCCA 62.077 66.667 0.00 0.00 37.18 4.51
5367 5622 2.363680 GCACCTGCTAGCAAGAGATCTA 59.636 50.000 20.14 0.00 38.21 1.98
5368 5623 3.552684 GCACCTGCTAGCAAGAGATCTAG 60.553 52.174 20.14 4.14 38.21 2.43
5369 5624 3.636300 CACCTGCTAGCAAGAGATCTAGT 59.364 47.826 20.14 3.27 35.80 2.57
5414 5669 3.996825 GCATCGTTCGCCAAAGAAT 57.003 47.368 0.00 0.00 32.25 2.40
5415 5670 1.815132 GCATCGTTCGCCAAAGAATC 58.185 50.000 0.00 0.00 32.25 2.52
5416 5671 1.130373 GCATCGTTCGCCAAAGAATCA 59.870 47.619 0.00 0.00 32.25 2.57
5417 5672 2.414029 GCATCGTTCGCCAAAGAATCAA 60.414 45.455 0.00 0.00 32.25 2.57
5418 5673 3.731867 GCATCGTTCGCCAAAGAATCAAT 60.732 43.478 0.00 0.00 32.25 2.57
5419 5674 4.414852 CATCGTTCGCCAAAGAATCAATT 58.585 39.130 0.00 0.00 32.25 2.32
5420 5675 3.820689 TCGTTCGCCAAAGAATCAATTG 58.179 40.909 0.00 0.00 32.25 2.32
5421 5676 3.500299 TCGTTCGCCAAAGAATCAATTGA 59.500 39.130 11.26 11.26 32.25 2.57
5422 5677 4.023622 TCGTTCGCCAAAGAATCAATTGAA 60.024 37.500 13.09 0.00 32.25 2.69
5423 5678 4.679197 CGTTCGCCAAAGAATCAATTGAAA 59.321 37.500 13.09 0.00 32.25 2.69
5424 5679 5.387342 CGTTCGCCAAAGAATCAATTGAAAC 60.387 40.000 13.09 9.45 32.25 2.78
5425 5680 4.555262 TCGCCAAAGAATCAATTGAAACC 58.445 39.130 13.09 4.71 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 7.127405 TGGTCTAGAATATACCACCACTGTAA 58.873 38.462 0.00 0.00 42.16 2.41
52 53 9.627123 GTTAGCAGGATATCTCTATACTGAGAT 57.373 37.037 8.68 11.10 45.73 2.75
53 54 8.606830 TGTTAGCAGGATATCTCTATACTGAGA 58.393 37.037 8.68 0.00 45.73 3.27
54 55 8.800370 TGTTAGCAGGATATCTCTATACTGAG 57.200 38.462 8.68 0.00 45.73 3.35
55 56 9.402320 GATGTTAGCAGGATATCTCTATACTGA 57.598 37.037 8.68 0.00 45.73 3.41
56 57 8.341903 CGATGTTAGCAGGATATCTCTATACTG 58.658 40.741 2.05 1.62 45.66 2.74
57 58 8.050325 ACGATGTTAGCAGGATATCTCTATACT 58.950 37.037 2.05 0.71 0.00 2.12
58 59 8.126074 CACGATGTTAGCAGGATATCTCTATAC 58.874 40.741 2.05 4.89 0.00 1.47
59 60 8.047310 TCACGATGTTAGCAGGATATCTCTATA 58.953 37.037 2.05 0.00 0.00 1.31
60 61 6.887002 TCACGATGTTAGCAGGATATCTCTAT 59.113 38.462 2.05 0.00 0.00 1.98
61 62 6.238648 TCACGATGTTAGCAGGATATCTCTA 58.761 40.000 2.05 0.00 0.00 2.43
62 63 5.073428 TCACGATGTTAGCAGGATATCTCT 58.927 41.667 2.05 0.85 0.00 3.10
63 64 5.378292 TCACGATGTTAGCAGGATATCTC 57.622 43.478 2.05 0.00 0.00 2.75
64 65 5.791336 TTCACGATGTTAGCAGGATATCT 57.209 39.130 2.05 0.00 0.00 1.98
65 66 7.426929 AATTTCACGATGTTAGCAGGATATC 57.573 36.000 0.00 0.00 0.00 1.63
66 67 7.807977 AAATTTCACGATGTTAGCAGGATAT 57.192 32.000 0.00 0.00 0.00 1.63
67 68 8.725405 TTAAATTTCACGATGTTAGCAGGATA 57.275 30.769 0.00 0.00 0.00 2.59
68 69 7.624360 TTAAATTTCACGATGTTAGCAGGAT 57.376 32.000 0.00 0.00 0.00 3.24
69 70 7.441890 TTTAAATTTCACGATGTTAGCAGGA 57.558 32.000 0.00 0.00 0.00 3.86
70 71 7.593273 TGTTTTAAATTTCACGATGTTAGCAGG 59.407 33.333 0.00 0.00 0.00 4.85
71 72 8.500837 TGTTTTAAATTTCACGATGTTAGCAG 57.499 30.769 0.00 0.00 0.00 4.24
72 73 8.858003 TTGTTTTAAATTTCACGATGTTAGCA 57.142 26.923 0.00 0.00 0.00 3.49
73 74 7.944649 GCTTGTTTTAAATTTCACGATGTTAGC 59.055 33.333 0.00 0.00 0.00 3.09
74 75 8.963130 TGCTTGTTTTAAATTTCACGATGTTAG 58.037 29.630 0.00 0.00 0.00 2.34
75 76 8.747666 GTGCTTGTTTTAAATTTCACGATGTTA 58.252 29.630 0.00 0.00 0.00 2.41
76 77 7.514435 CGTGCTTGTTTTAAATTTCACGATGTT 60.514 33.333 15.61 0.00 45.89 2.71
77 78 6.075099 CGTGCTTGTTTTAAATTTCACGATGT 60.075 34.615 15.61 0.00 45.89 3.06
78 79 6.141527 TCGTGCTTGTTTTAAATTTCACGATG 59.858 34.615 18.00 0.00 46.31 3.84
79 80 6.202937 TCGTGCTTGTTTTAAATTTCACGAT 58.797 32.000 18.00 0.00 46.31 3.73
80 81 5.858159 CGTGCTTGTTTTAAATTTCACGA 57.142 34.783 15.61 2.99 45.89 4.35
81 82 5.858159 TCGTGCTTGTTTTAAATTTCACG 57.142 34.783 14.89 14.89 44.83 4.35
82 83 8.211838 GGTAATCGTGCTTGTTTTAAATTTCAC 58.788 33.333 0.00 0.00 0.00 3.18
83 84 8.138712 AGGTAATCGTGCTTGTTTTAAATTTCA 58.861 29.630 0.00 0.00 0.00 2.69
84 85 8.515473 AGGTAATCGTGCTTGTTTTAAATTTC 57.485 30.769 0.00 0.00 0.00 2.17
85 86 8.880878 AAGGTAATCGTGCTTGTTTTAAATTT 57.119 26.923 0.00 0.00 0.00 1.82
86 87 8.880878 AAAGGTAATCGTGCTTGTTTTAAATT 57.119 26.923 0.00 0.00 0.00 1.82
87 88 8.760569 CAAAAGGTAATCGTGCTTGTTTTAAAT 58.239 29.630 0.00 0.00 0.00 1.40
88 89 7.760340 ACAAAAGGTAATCGTGCTTGTTTTAAA 59.240 29.630 0.00 0.00 0.00 1.52
89 90 7.221067 CACAAAAGGTAATCGTGCTTGTTTTAA 59.779 33.333 0.00 0.00 0.00 1.52
90 91 6.693545 CACAAAAGGTAATCGTGCTTGTTTTA 59.306 34.615 0.00 0.00 0.00 1.52
91 92 5.518487 CACAAAAGGTAATCGTGCTTGTTTT 59.482 36.000 0.00 0.00 0.00 2.43
92 93 5.040635 CACAAAAGGTAATCGTGCTTGTTT 58.959 37.500 0.00 0.00 0.00 2.83
93 94 4.606961 CACAAAAGGTAATCGTGCTTGTT 58.393 39.130 0.00 0.00 0.00 2.83
94 95 4.223320 CACAAAAGGTAATCGTGCTTGT 57.777 40.909 0.00 0.00 0.00 3.16
99 100 7.067532 TGTAATAGCACAAAAGGTAATCGTG 57.932 36.000 0.00 0.00 0.00 4.35
100 101 7.551262 TGATGTAATAGCACAAAAGGTAATCGT 59.449 33.333 0.00 0.00 30.84 3.73
101 102 7.915508 TGATGTAATAGCACAAAAGGTAATCG 58.084 34.615 0.00 0.00 30.84 3.34
102 103 8.893727 ACTGATGTAATAGCACAAAAGGTAATC 58.106 33.333 0.00 0.00 30.84 1.75
103 104 8.807948 ACTGATGTAATAGCACAAAAGGTAAT 57.192 30.769 0.00 0.00 30.84 1.89
104 105 8.100791 AGACTGATGTAATAGCACAAAAGGTAA 58.899 33.333 0.00 0.00 30.84 2.85
105 106 7.549134 CAGACTGATGTAATAGCACAAAAGGTA 59.451 37.037 0.00 0.00 30.84 3.08
106 107 6.372659 CAGACTGATGTAATAGCACAAAAGGT 59.627 38.462 0.00 0.00 30.84 3.50
107 108 6.676456 GCAGACTGATGTAATAGCACAAAAGG 60.676 42.308 6.65 0.00 30.84 3.11
108 109 6.253746 GCAGACTGATGTAATAGCACAAAAG 58.746 40.000 6.65 0.00 30.84 2.27
109 110 5.123820 GGCAGACTGATGTAATAGCACAAAA 59.876 40.000 6.65 0.00 30.84 2.44
110 111 4.635765 GGCAGACTGATGTAATAGCACAAA 59.364 41.667 6.65 0.00 30.84 2.83
111 112 4.191544 GGCAGACTGATGTAATAGCACAA 58.808 43.478 6.65 0.00 30.84 3.33
112 113 3.197549 TGGCAGACTGATGTAATAGCACA 59.802 43.478 6.65 0.00 0.00 4.57
113 114 3.797039 TGGCAGACTGATGTAATAGCAC 58.203 45.455 6.65 0.00 0.00 4.40
114 115 4.486125 TTGGCAGACTGATGTAATAGCA 57.514 40.909 6.65 0.00 0.00 3.49
115 116 7.678947 ATAATTGGCAGACTGATGTAATAGC 57.321 36.000 6.65 0.00 0.00 2.97
116 117 9.888878 CAAATAATTGGCAGACTGATGTAATAG 57.111 33.333 6.65 0.00 32.69 1.73
117 118 9.407380 ACAAATAATTGGCAGACTGATGTAATA 57.593 29.630 6.65 0.00 41.01 0.98
118 119 8.297470 ACAAATAATTGGCAGACTGATGTAAT 57.703 30.769 6.65 0.00 41.01 1.89
119 120 7.701539 ACAAATAATTGGCAGACTGATGTAA 57.298 32.000 6.65 0.00 41.01 2.41
120 121 8.264347 TCTACAAATAATTGGCAGACTGATGTA 58.736 33.333 6.65 0.00 41.01 2.29
121 122 7.112122 TCTACAAATAATTGGCAGACTGATGT 58.888 34.615 6.65 0.00 41.01 3.06
122 123 7.558161 TCTACAAATAATTGGCAGACTGATG 57.442 36.000 6.65 0.00 41.01 3.07
123 124 8.757982 AATCTACAAATAATTGGCAGACTGAT 57.242 30.769 6.65 0.00 41.01 2.90
124 125 8.579850 AAATCTACAAATAATTGGCAGACTGA 57.420 30.769 6.65 0.00 41.01 3.41
152 153 9.733556 GTTCCCATATGGTATGTGTATATTTCA 57.266 33.333 20.46 0.00 34.77 2.69
153 154 9.959721 AGTTCCCATATGGTATGTGTATATTTC 57.040 33.333 20.46 0.00 34.77 2.17
157 158 9.555411 ACATAGTTCCCATATGGTATGTGTATA 57.445 33.333 24.47 8.66 34.41 1.47
158 159 8.449423 ACATAGTTCCCATATGGTATGTGTAT 57.551 34.615 24.47 11.51 34.41 2.29
159 160 7.865530 ACATAGTTCCCATATGGTATGTGTA 57.134 36.000 24.47 10.12 34.41 2.90
160 161 6.763715 ACATAGTTCCCATATGGTATGTGT 57.236 37.500 24.47 16.65 34.41 3.72
161 162 9.567776 TTAAACATAGTTCCCATATGGTATGTG 57.432 33.333 25.24 16.63 35.29 3.21
180 181 8.760569 CGCTGGTACTTTTTGAAAATTAAACAT 58.239 29.630 0.00 0.00 0.00 2.71
181 182 7.222999 CCGCTGGTACTTTTTGAAAATTAAACA 59.777 33.333 0.00 0.00 0.00 2.83
182 183 7.435784 TCCGCTGGTACTTTTTGAAAATTAAAC 59.564 33.333 0.00 0.00 0.00 2.01
183 184 7.490000 TCCGCTGGTACTTTTTGAAAATTAAA 58.510 30.769 0.00 0.00 0.00 1.52
184 185 7.040473 TCCGCTGGTACTTTTTGAAAATTAA 57.960 32.000 0.00 0.00 0.00 1.40
185 186 6.636562 TCCGCTGGTACTTTTTGAAAATTA 57.363 33.333 0.00 0.00 0.00 1.40
186 187 5.523438 TCCGCTGGTACTTTTTGAAAATT 57.477 34.783 0.00 0.00 0.00 1.82
187 188 5.722021 ATCCGCTGGTACTTTTTGAAAAT 57.278 34.783 0.00 0.00 0.00 1.82
188 189 6.636562 TTATCCGCTGGTACTTTTTGAAAA 57.363 33.333 0.00 0.00 0.00 2.29
189 190 6.827586 ATTATCCGCTGGTACTTTTTGAAA 57.172 33.333 0.00 0.00 0.00 2.69
190 191 8.514330 AATATTATCCGCTGGTACTTTTTGAA 57.486 30.769 0.00 0.00 0.00 2.69
191 192 9.787435 ATAATATTATCCGCTGGTACTTTTTGA 57.213 29.630 1.91 0.00 0.00 2.69
197 198 9.745880 CGAATAATAATATTATCCGCTGGTACT 57.254 33.333 8.42 0.00 31.83 2.73
198 199 9.525409 ACGAATAATAATATTATCCGCTGGTAC 57.475 33.333 10.78 0.00 31.83 3.34
199 200 9.740239 GACGAATAATAATATTATCCGCTGGTA 57.260 33.333 10.78 0.00 31.83 3.25
200 201 8.255206 TGACGAATAATAATATTATCCGCTGGT 58.745 33.333 10.78 1.86 31.83 4.00
201 202 8.642908 TGACGAATAATAATATTATCCGCTGG 57.357 34.615 10.78 0.00 31.83 4.85
202 203 9.516314 TCTGACGAATAATAATATTATCCGCTG 57.484 33.333 10.78 8.31 31.83 5.18
212 213 9.997482 GTTGCCTTTTTCTGACGAATAATAATA 57.003 29.630 0.00 0.00 0.00 0.98
213 214 8.739972 AGTTGCCTTTTTCTGACGAATAATAAT 58.260 29.630 0.00 0.00 0.00 1.28
214 215 8.106247 AGTTGCCTTTTTCTGACGAATAATAA 57.894 30.769 0.00 0.00 0.00 1.40
215 216 7.681939 AGTTGCCTTTTTCTGACGAATAATA 57.318 32.000 0.00 0.00 0.00 0.98
216 217 6.575162 AGTTGCCTTTTTCTGACGAATAAT 57.425 33.333 0.00 0.00 0.00 1.28
217 218 7.499321 TTAGTTGCCTTTTTCTGACGAATAA 57.501 32.000 0.00 0.00 0.00 1.40
218 219 7.499321 TTTAGTTGCCTTTTTCTGACGAATA 57.501 32.000 0.00 0.00 0.00 1.75
219 220 6.385649 TTTAGTTGCCTTTTTCTGACGAAT 57.614 33.333 0.00 0.00 0.00 3.34
220 221 5.821516 TTTAGTTGCCTTTTTCTGACGAA 57.178 34.783 0.00 0.00 0.00 3.85
221 222 6.385649 AATTTAGTTGCCTTTTTCTGACGA 57.614 33.333 0.00 0.00 0.00 4.20
222 223 8.568732 TTAAATTTAGTTGCCTTTTTCTGACG 57.431 30.769 0.00 0.00 0.00 4.35
270 271 3.646162 ACGCCCATCTATTGTCAATAGGA 59.354 43.478 25.57 15.89 40.97 2.94
271 272 4.008074 ACGCCCATCTATTGTCAATAGG 57.992 45.455 25.57 15.37 40.97 2.57
272 273 4.627467 GCTACGCCCATCTATTGTCAATAG 59.373 45.833 21.91 21.91 41.77 1.73
273 274 4.039852 TGCTACGCCCATCTATTGTCAATA 59.960 41.667 5.19 5.19 0.00 1.90
274 275 3.181455 TGCTACGCCCATCTATTGTCAAT 60.181 43.478 3.06 3.06 0.00 2.57
275 276 2.169561 TGCTACGCCCATCTATTGTCAA 59.830 45.455 0.00 0.00 0.00 3.18
276 277 1.760029 TGCTACGCCCATCTATTGTCA 59.240 47.619 0.00 0.00 0.00 3.58
277 278 2.526304 TGCTACGCCCATCTATTGTC 57.474 50.000 0.00 0.00 0.00 3.18
278 279 2.170607 AGTTGCTACGCCCATCTATTGT 59.829 45.455 0.00 0.00 0.00 2.71
279 280 2.838736 AGTTGCTACGCCCATCTATTG 58.161 47.619 0.00 0.00 0.00 1.90
280 281 3.206150 CAAGTTGCTACGCCCATCTATT 58.794 45.455 0.00 0.00 0.00 1.73
281 282 2.838736 CAAGTTGCTACGCCCATCTAT 58.161 47.619 0.00 0.00 0.00 1.98
282 283 1.742411 GCAAGTTGCTACGCCCATCTA 60.742 52.381 20.71 0.00 40.96 1.98
283 284 1.026718 GCAAGTTGCTACGCCCATCT 61.027 55.000 20.71 0.00 40.96 2.90
284 285 1.305219 TGCAAGTTGCTACGCCCATC 61.305 55.000 27.17 0.00 45.31 3.51
285 286 0.680921 ATGCAAGTTGCTACGCCCAT 60.681 50.000 27.17 8.92 45.31 4.00
286 287 0.035915 TATGCAAGTTGCTACGCCCA 60.036 50.000 27.17 6.82 45.31 5.36
287 288 0.377203 GTATGCAAGTTGCTACGCCC 59.623 55.000 27.17 7.02 45.31 6.13
288 289 0.377203 GGTATGCAAGTTGCTACGCC 59.623 55.000 27.17 18.98 45.31 5.68
289 290 1.083489 TGGTATGCAAGTTGCTACGC 58.917 50.000 27.17 18.15 45.31 4.42
290 291 2.346803 AGTGGTATGCAAGTTGCTACG 58.653 47.619 27.17 0.00 45.31 3.51
291 292 3.334691 TGAGTGGTATGCAAGTTGCTAC 58.665 45.455 27.17 23.07 45.31 3.58
292 293 3.694043 TGAGTGGTATGCAAGTTGCTA 57.306 42.857 27.17 14.76 45.31 3.49
293 294 2.566833 TGAGTGGTATGCAAGTTGCT 57.433 45.000 27.17 15.54 45.31 3.91
294 295 3.641437 TTTGAGTGGTATGCAAGTTGC 57.359 42.857 21.17 21.17 45.29 4.17
295 296 5.047802 AGGAATTTGAGTGGTATGCAAGTTG 60.048 40.000 0.00 0.00 0.00 3.16
296 297 5.079643 AGGAATTTGAGTGGTATGCAAGTT 58.920 37.500 0.00 0.00 0.00 2.66
297 298 4.666512 AGGAATTTGAGTGGTATGCAAGT 58.333 39.130 0.00 0.00 0.00 3.16
298 299 4.946157 AGAGGAATTTGAGTGGTATGCAAG 59.054 41.667 0.00 0.00 0.00 4.01
299 300 4.922206 AGAGGAATTTGAGTGGTATGCAA 58.078 39.130 0.00 0.00 0.00 4.08
300 301 4.225942 AGAGAGGAATTTGAGTGGTATGCA 59.774 41.667 0.00 0.00 0.00 3.96
301 302 4.775236 AGAGAGGAATTTGAGTGGTATGC 58.225 43.478 0.00 0.00 0.00 3.14
302 303 8.970859 AATTAGAGAGGAATTTGAGTGGTATG 57.029 34.615 0.00 0.00 0.00 2.39
304 305 9.488762 TCTAATTAGAGAGGAATTTGAGTGGTA 57.511 33.333 11.24 0.00 0.00 3.25
305 306 8.380742 TCTAATTAGAGAGGAATTTGAGTGGT 57.619 34.615 11.24 0.00 0.00 4.16
351 352 9.772973 TCTTTCTTGTAACTTATGCTTGTCTTA 57.227 29.630 0.00 0.00 0.00 2.10
352 353 8.677148 TCTTTCTTGTAACTTATGCTTGTCTT 57.323 30.769 0.00 0.00 0.00 3.01
353 354 8.677148 TTCTTTCTTGTAACTTATGCTTGTCT 57.323 30.769 0.00 0.00 0.00 3.41
354 355 9.730420 TTTTCTTTCTTGTAACTTATGCTTGTC 57.270 29.630 0.00 0.00 0.00 3.18
365 366 9.290483 CCTCAAGTTCTTTTTCTTTCTTGTAAC 57.710 33.333 0.00 0.00 35.35 2.50
366 367 9.238368 TCCTCAAGTTCTTTTTCTTTCTTGTAA 57.762 29.630 0.00 0.00 35.35 2.41
367 368 8.801882 TCCTCAAGTTCTTTTTCTTTCTTGTA 57.198 30.769 0.00 0.00 35.35 2.41
368 369 7.703058 TCCTCAAGTTCTTTTTCTTTCTTGT 57.297 32.000 0.00 0.00 35.35 3.16
369 370 8.986477 TTTCCTCAAGTTCTTTTTCTTTCTTG 57.014 30.769 0.00 0.00 35.21 3.02
371 372 9.591792 CAATTTCCTCAAGTTCTTTTTCTTTCT 57.408 29.630 0.00 0.00 0.00 2.52
372 373 8.331022 GCAATTTCCTCAAGTTCTTTTTCTTTC 58.669 33.333 0.00 0.00 0.00 2.62
373 374 7.823799 TGCAATTTCCTCAAGTTCTTTTTCTTT 59.176 29.630 0.00 0.00 0.00 2.52
374 375 7.330262 TGCAATTTCCTCAAGTTCTTTTTCTT 58.670 30.769 0.00 0.00 0.00 2.52
375 376 6.877236 TGCAATTTCCTCAAGTTCTTTTTCT 58.123 32.000 0.00 0.00 0.00 2.52
376 377 7.719778 ATGCAATTTCCTCAAGTTCTTTTTC 57.280 32.000 0.00 0.00 0.00 2.29
408 409 9.620259 GGCTCTTAGCTATTAGGCATATAAAAT 57.380 33.333 18.87 0.00 41.99 1.82
409 410 8.602424 TGGCTCTTAGCTATTAGGCATATAAAA 58.398 33.333 21.24 4.46 41.99 1.52
410 411 8.146053 TGGCTCTTAGCTATTAGGCATATAAA 57.854 34.615 21.24 5.01 41.99 1.40
411 412 7.733773 TGGCTCTTAGCTATTAGGCATATAA 57.266 36.000 21.24 5.55 41.99 0.98
412 413 7.733773 TTGGCTCTTAGCTATTAGGCATATA 57.266 36.000 23.96 12.67 43.09 0.86
413 414 6.627087 TTGGCTCTTAGCTATTAGGCATAT 57.373 37.500 23.96 0.00 43.09 1.78
414 415 6.433847 TTTGGCTCTTAGCTATTAGGCATA 57.566 37.500 23.96 18.97 43.09 3.14
415 416 4.982241 TTGGCTCTTAGCTATTAGGCAT 57.018 40.909 23.96 0.00 43.09 4.40
416 417 4.771114 TTTGGCTCTTAGCTATTAGGCA 57.229 40.909 21.24 21.24 41.99 4.75
417 418 4.881850 TGTTTTGGCTCTTAGCTATTAGGC 59.118 41.667 17.62 17.62 41.99 3.93
418 419 6.349300 TCTGTTTTGGCTCTTAGCTATTAGG 58.651 40.000 0.00 0.00 41.99 2.69
419 420 7.041508 CCATCTGTTTTGGCTCTTAGCTATTAG 60.042 40.741 0.00 0.00 41.99 1.73
420 421 6.767902 CCATCTGTTTTGGCTCTTAGCTATTA 59.232 38.462 0.00 0.00 41.99 0.98
421 422 5.591877 CCATCTGTTTTGGCTCTTAGCTATT 59.408 40.000 0.00 0.00 41.99 1.73
422 423 5.128919 CCATCTGTTTTGGCTCTTAGCTAT 58.871 41.667 0.00 0.00 41.99 2.97
423 424 4.517285 CCATCTGTTTTGGCTCTTAGCTA 58.483 43.478 0.00 0.00 41.99 3.32
424 425 3.350833 CCATCTGTTTTGGCTCTTAGCT 58.649 45.455 0.00 0.00 41.99 3.32
425 426 2.424956 CCCATCTGTTTTGGCTCTTAGC 59.575 50.000 0.00 0.00 41.46 3.09
426 427 2.424956 GCCCATCTGTTTTGGCTCTTAG 59.575 50.000 0.00 0.00 40.77 2.18
427 428 2.446435 GCCCATCTGTTTTGGCTCTTA 58.554 47.619 0.00 0.00 40.77 2.10
428 429 1.260544 GCCCATCTGTTTTGGCTCTT 58.739 50.000 0.00 0.00 40.77 2.85
429 430 0.962356 CGCCCATCTGTTTTGGCTCT 60.962 55.000 0.00 0.00 41.80 4.09
430 431 1.508088 CGCCCATCTGTTTTGGCTC 59.492 57.895 0.00 0.00 41.80 4.70
431 432 2.639327 GCGCCCATCTGTTTTGGCT 61.639 57.895 0.00 0.00 41.80 4.75
432 433 2.125952 GCGCCCATCTGTTTTGGC 60.126 61.111 0.00 0.00 40.54 4.52
433 434 1.213537 CTGCGCCCATCTGTTTTGG 59.786 57.895 4.18 0.00 0.00 3.28
434 435 1.444895 GCTGCGCCCATCTGTTTTG 60.445 57.895 4.18 0.00 0.00 2.44
435 436 1.462731 TTGCTGCGCCCATCTGTTTT 61.463 50.000 4.18 0.00 0.00 2.43
436 437 1.902918 TTGCTGCGCCCATCTGTTT 60.903 52.632 4.18 0.00 0.00 2.83
437 438 2.282391 TTGCTGCGCCCATCTGTT 60.282 55.556 4.18 0.00 0.00 3.16
438 439 3.058160 GTTGCTGCGCCCATCTGT 61.058 61.111 4.18 0.00 0.00 3.41
439 440 4.170062 CGTTGCTGCGCCCATCTG 62.170 66.667 4.18 0.00 0.00 2.90
451 452 4.834892 ATTGATGGCGCGCGTTGC 62.835 61.111 32.35 14.96 41.47 4.17
452 453 2.651367 ATCATTGATGGCGCGCGTTG 62.651 55.000 32.35 15.09 0.00 4.10
453 454 2.378945 GATCATTGATGGCGCGCGTT 62.379 55.000 32.35 15.25 0.00 4.84
454 455 2.885676 GATCATTGATGGCGCGCGT 61.886 57.895 32.35 16.88 0.00 6.01
455 456 1.284297 TAGATCATTGATGGCGCGCG 61.284 55.000 28.44 28.44 0.00 6.86
456 457 0.441533 CTAGATCATTGATGGCGCGC 59.558 55.000 25.94 25.94 0.00 6.86
457 458 1.458445 CACTAGATCATTGATGGCGCG 59.542 52.381 0.00 0.00 0.00 6.86
458 459 1.802960 CCACTAGATCATTGATGGCGC 59.197 52.381 3.32 0.00 0.00 6.53
459 460 3.391506 TCCACTAGATCATTGATGGCG 57.608 47.619 3.32 0.00 0.00 5.69
467 468 9.722184 GCATGCATATTATATCCACTAGATCAT 57.278 33.333 14.21 0.00 36.33 2.45
468 469 7.869429 CGCATGCATATTATATCCACTAGATCA 59.131 37.037 19.57 0.00 36.33 2.92
469 470 7.148672 GCGCATGCATATTATATCCACTAGATC 60.149 40.741 19.57 0.00 42.15 2.75
470 471 6.648310 GCGCATGCATATTATATCCACTAGAT 59.352 38.462 19.57 0.00 42.15 1.98
471 472 5.985530 GCGCATGCATATTATATCCACTAGA 59.014 40.000 19.57 0.00 42.15 2.43
472 473 5.987953 AGCGCATGCATATTATATCCACTAG 59.012 40.000 19.57 0.00 46.23 2.57
473 474 5.917462 AGCGCATGCATATTATATCCACTA 58.083 37.500 19.57 0.00 46.23 2.74
474 475 4.774124 AGCGCATGCATATTATATCCACT 58.226 39.130 19.57 0.00 46.23 4.00
475 476 5.268544 CAAGCGCATGCATATTATATCCAC 58.731 41.667 19.57 0.00 46.23 4.02
476 477 4.201940 GCAAGCGCATGCATATTATATCCA 60.202 41.667 30.69 0.00 45.70 3.41
477 478 4.285292 GCAAGCGCATGCATATTATATCC 58.715 43.478 30.69 0.00 45.70 2.59
494 495 1.750780 GGAAGTAGGGGCAGCAAGC 60.751 63.158 0.00 0.00 44.65 4.01
495 496 0.257039 ATGGAAGTAGGGGCAGCAAG 59.743 55.000 0.00 0.00 0.00 4.01
496 497 0.704076 AATGGAAGTAGGGGCAGCAA 59.296 50.000 0.00 0.00 0.00 3.91
497 498 0.704076 AAATGGAAGTAGGGGCAGCA 59.296 50.000 0.00 0.00 0.00 4.41
498 499 2.092375 AGTAAATGGAAGTAGGGGCAGC 60.092 50.000 0.00 0.00 0.00 5.25
499 500 3.933861 AGTAAATGGAAGTAGGGGCAG 57.066 47.619 0.00 0.00 0.00 4.85
500 501 4.972568 TCATAGTAAATGGAAGTAGGGGCA 59.027 41.667 0.00 0.00 0.00 5.36
501 502 5.307196 TCTCATAGTAAATGGAAGTAGGGGC 59.693 44.000 0.00 0.00 0.00 5.80
502 503 6.782988 TCTCTCATAGTAAATGGAAGTAGGGG 59.217 42.308 0.00 0.00 0.00 4.79
503 504 7.039363 CCTCTCTCATAGTAAATGGAAGTAGGG 60.039 44.444 0.00 0.00 0.00 3.53
504 505 7.726291 TCCTCTCTCATAGTAAATGGAAGTAGG 59.274 40.741 0.00 0.00 0.00 3.18
505 506 8.698973 TCCTCTCTCATAGTAAATGGAAGTAG 57.301 38.462 0.00 0.00 0.00 2.57
506 507 8.915036 GTTCCTCTCTCATAGTAAATGGAAGTA 58.085 37.037 0.00 0.00 32.63 2.24
507 508 7.147637 GGTTCCTCTCTCATAGTAAATGGAAGT 60.148 40.741 0.00 0.00 32.63 3.01
508 509 7.147655 TGGTTCCTCTCTCATAGTAAATGGAAG 60.148 40.741 0.00 0.00 32.63 3.46
509 510 6.672218 TGGTTCCTCTCTCATAGTAAATGGAA 59.328 38.462 0.00 0.00 0.00 3.53
510 511 6.202331 TGGTTCCTCTCTCATAGTAAATGGA 58.798 40.000 0.00 0.00 0.00 3.41
511 512 6.485830 TGGTTCCTCTCTCATAGTAAATGG 57.514 41.667 0.00 0.00 0.00 3.16
512 513 7.504403 ACATGGTTCCTCTCTCATAGTAAATG 58.496 38.462 0.00 0.00 0.00 2.32
513 514 7.566879 AGACATGGTTCCTCTCTCATAGTAAAT 59.433 37.037 0.00 0.00 0.00 1.40
514 515 6.897966 AGACATGGTTCCTCTCTCATAGTAAA 59.102 38.462 0.00 0.00 0.00 2.01
515 516 6.436027 AGACATGGTTCCTCTCTCATAGTAA 58.564 40.000 0.00 0.00 0.00 2.24
516 517 6.019656 AGACATGGTTCCTCTCTCATAGTA 57.980 41.667 0.00 0.00 0.00 1.82
517 518 4.877773 AGACATGGTTCCTCTCTCATAGT 58.122 43.478 0.00 0.00 0.00 2.12
518 519 5.830457 TGTAGACATGGTTCCTCTCTCATAG 59.170 44.000 0.00 0.00 0.00 2.23
519 520 5.594725 GTGTAGACATGGTTCCTCTCTCATA 59.405 44.000 0.00 0.00 0.00 2.15
520 521 4.404073 GTGTAGACATGGTTCCTCTCTCAT 59.596 45.833 0.00 0.00 0.00 2.90
521 522 3.764434 GTGTAGACATGGTTCCTCTCTCA 59.236 47.826 0.00 0.00 0.00 3.27
522 523 3.131400 GGTGTAGACATGGTTCCTCTCTC 59.869 52.174 0.00 0.00 0.00 3.20
523 524 3.100671 GGTGTAGACATGGTTCCTCTCT 58.899 50.000 0.00 0.00 0.00 3.10
524 525 3.100671 AGGTGTAGACATGGTTCCTCTC 58.899 50.000 0.00 0.00 0.00 3.20
525 526 3.191888 AGGTGTAGACATGGTTCCTCT 57.808 47.619 0.00 0.00 0.00 3.69
526 527 3.983044 AAGGTGTAGACATGGTTCCTC 57.017 47.619 0.00 0.00 0.00 3.71
527 528 3.910627 AGAAAGGTGTAGACATGGTTCCT 59.089 43.478 0.00 0.00 0.00 3.36
528 529 4.287766 AGAAAGGTGTAGACATGGTTCC 57.712 45.455 0.00 0.00 0.00 3.62
529 530 6.407202 ACATAGAAAGGTGTAGACATGGTTC 58.593 40.000 0.00 0.00 0.00 3.62
530 531 6.374417 ACATAGAAAGGTGTAGACATGGTT 57.626 37.500 0.00 0.00 0.00 3.67
531 532 6.374417 AACATAGAAAGGTGTAGACATGGT 57.626 37.500 0.00 0.00 0.00 3.55
532 533 7.106239 AGAAACATAGAAAGGTGTAGACATGG 58.894 38.462 0.00 0.00 0.00 3.66
533 534 9.653287 TTAGAAACATAGAAAGGTGTAGACATG 57.347 33.333 0.00 0.00 0.00 3.21
558 559 8.976353 TGGAGCACCATGTAATTTTATTGTATT 58.024 29.630 0.00 0.00 41.77 1.89
559 560 8.532186 TGGAGCACCATGTAATTTTATTGTAT 57.468 30.769 0.00 0.00 41.77 2.29
560 561 7.416213 GCTGGAGCACCATGTAATTTTATTGTA 60.416 37.037 2.38 0.00 45.87 2.41
561 562 6.627953 GCTGGAGCACCATGTAATTTTATTGT 60.628 38.462 2.38 0.00 45.87 2.71
562 563 5.750067 GCTGGAGCACCATGTAATTTTATTG 59.250 40.000 2.38 0.00 45.87 1.90
563 564 5.906073 GCTGGAGCACCATGTAATTTTATT 58.094 37.500 2.38 0.00 45.87 1.40
564 565 5.520376 GCTGGAGCACCATGTAATTTTAT 57.480 39.130 2.38 0.00 45.87 1.40
565 566 4.981806 GCTGGAGCACCATGTAATTTTA 57.018 40.909 2.38 0.00 45.87 1.52
566 567 3.874392 GCTGGAGCACCATGTAATTTT 57.126 42.857 2.38 0.00 45.87 1.82
579 580 1.082690 GCAGAGTTTAGTGCTGGAGC 58.917 55.000 0.00 0.00 42.50 4.70
580 581 1.677217 GGGCAGAGTTTAGTGCTGGAG 60.677 57.143 0.00 0.00 39.76 3.86
581 582 0.324943 GGGCAGAGTTTAGTGCTGGA 59.675 55.000 0.00 0.00 39.76 3.86
582 583 0.678048 GGGGCAGAGTTTAGTGCTGG 60.678 60.000 0.00 0.00 39.76 4.85
583 584 0.036732 TGGGGCAGAGTTTAGTGCTG 59.963 55.000 0.00 0.00 39.76 4.41
584 585 0.326264 CTGGGGCAGAGTTTAGTGCT 59.674 55.000 0.00 0.00 39.76 4.40
585 586 1.308783 GCTGGGGCAGAGTTTAGTGC 61.309 60.000 0.00 0.00 39.08 4.40
586 587 0.678048 GGCTGGGGCAGAGTTTAGTG 60.678 60.000 0.00 0.00 40.87 2.74
587 588 0.842467 AGGCTGGGGCAGAGTTTAGT 60.842 55.000 0.00 0.00 40.87 2.24
588 589 0.393537 CAGGCTGGGGCAGAGTTTAG 60.394 60.000 6.61 0.00 40.87 1.85
589 590 1.133809 ACAGGCTGGGGCAGAGTTTA 61.134 55.000 20.34 0.00 40.87 2.01
590 591 2.011617 AACAGGCTGGGGCAGAGTTT 62.012 55.000 20.34 0.00 40.87 2.66
591 592 2.417558 GAACAGGCTGGGGCAGAGTT 62.418 60.000 20.34 0.43 40.87 3.01
592 593 2.856000 AACAGGCTGGGGCAGAGT 60.856 61.111 20.34 0.00 40.87 3.24
593 594 2.045536 GAACAGGCTGGGGCAGAG 60.046 66.667 20.34 0.00 40.87 3.35
594 595 2.233566 ATGAACAGGCTGGGGCAGA 61.234 57.895 20.34 0.00 40.87 4.26
595 596 2.050350 CATGAACAGGCTGGGGCAG 61.050 63.158 20.34 1.69 40.87 4.85
596 597 2.036098 CATGAACAGGCTGGGGCA 59.964 61.111 20.34 13.55 40.87 5.36
597 598 2.036256 ACATGAACAGGCTGGGGC 59.964 61.111 20.34 7.97 37.82 5.80
598 599 0.033796 ATGACATGAACAGGCTGGGG 60.034 55.000 20.34 5.58 0.00 4.96
599 600 1.386533 GATGACATGAACAGGCTGGG 58.613 55.000 20.34 5.22 0.00 4.45
600 601 1.064906 AGGATGACATGAACAGGCTGG 60.065 52.381 20.34 2.55 0.00 4.85
601 602 2.414994 AGGATGACATGAACAGGCTG 57.585 50.000 14.16 14.16 0.00 4.85
610 611 1.655484 TTGCACGCTAGGATGACATG 58.345 50.000 0.00 0.00 0.00 3.21
650 651 1.523032 GTCCATTCTTACGGGCCGG 60.523 63.158 31.78 13.02 0.00 6.13
656 657 3.172050 CGTGTCTCTGTCCATTCTTACG 58.828 50.000 0.00 0.00 0.00 3.18
660 661 0.247736 GCCGTGTCTCTGTCCATTCT 59.752 55.000 0.00 0.00 0.00 2.40
669 670 2.524394 ACAGTGGGCCGTGTCTCT 60.524 61.111 5.54 0.00 0.00 3.10
683 684 0.169672 CGAAAAGCTGGGCATCACAG 59.830 55.000 0.00 0.00 38.95 3.66
684 685 0.537143 ACGAAAAGCTGGGCATCACA 60.537 50.000 0.00 0.00 0.00 3.58
757 759 4.079269 TGCAAATATCATCCTCCAAAGGGA 60.079 41.667 0.00 0.00 43.56 4.20
763 765 6.131264 AGAAATGTGCAAATATCATCCTCCA 58.869 36.000 0.00 0.00 0.00 3.86
836 840 7.172019 GCAATTCCTTCTCAAAATTTGTCATGT 59.828 33.333 5.56 0.00 0.00 3.21
838 842 7.447594 AGCAATTCCTTCTCAAAATTTGTCAT 58.552 30.769 5.56 0.00 0.00 3.06
839 843 6.819284 AGCAATTCCTTCTCAAAATTTGTCA 58.181 32.000 5.56 0.00 0.00 3.58
900 926 1.883926 GTTCGCTGGGGTTACATTTGT 59.116 47.619 0.00 0.00 0.00 2.83
930 956 8.403236 ACAATAATAAGGAAACGGTAATGCTTC 58.597 33.333 4.33 0.00 0.00 3.86
949 975 2.936498 CGTGGCGAGAGGAAACAATAAT 59.064 45.455 0.00 0.00 0.00 1.28
1053 1079 0.633921 CTCCCCTTCTCTCCCTCTGA 59.366 60.000 0.00 0.00 0.00 3.27
1172 1198 4.011517 GGGACCCTTCGTGGCGAA 62.012 66.667 2.09 3.93 43.75 4.70
1276 1308 2.892425 GCGCGGTGGATGAGGAAG 60.892 66.667 8.83 0.00 0.00 3.46
1443 1476 1.382420 AGCCAAACAACCCCAAGCA 60.382 52.632 0.00 0.00 0.00 3.91
1540 1574 5.220265 GGTGTTGCATAATCAAATCTTTGCG 60.220 40.000 0.00 0.00 38.05 4.85
1578 1612 2.126307 AGCACGAGTACAGCGCAG 60.126 61.111 11.47 3.33 0.00 5.18
1586 1620 0.243907 GAACAGCCAGAGCACGAGTA 59.756 55.000 0.00 0.00 43.56 2.59
1619 1653 4.319177 ACGAAAACCAGATCTTCTTCCAG 58.681 43.478 0.00 0.00 0.00 3.86
1665 1699 1.822990 TGAGAATCGCTACGGAAACCT 59.177 47.619 0.00 0.00 38.61 3.50
1773 1807 2.191128 ACTCTTGAGATTGCGCCTTT 57.809 45.000 4.18 0.00 0.00 3.11
1798 1838 4.006989 TGAACCATATTGAAGTCAACCCG 58.993 43.478 0.00 0.00 38.86 5.28
2280 2326 4.889832 ATCAGTCGAGCATCCAAAATTC 57.110 40.909 0.00 0.00 0.00 2.17
2329 2375 2.065899 TGGAACCAAGGACCACTTTG 57.934 50.000 0.00 0.00 37.29 2.77
2356 2402 3.068064 TGCGCCCATCAGTCGAGA 61.068 61.111 4.18 0.00 0.00 4.04
2362 2408 2.184830 CACATCCTGCGCCCATCAG 61.185 63.158 4.18 0.00 0.00 2.90
2364 2410 1.750399 AACACATCCTGCGCCCATC 60.750 57.895 4.18 0.00 0.00 3.51
2401 2448 1.767088 CAGATTGAGCCCATCCTGAGA 59.233 52.381 0.00 0.00 0.00 3.27
2450 2499 3.926821 ACAAACGTTGTTGGACTGTTT 57.073 38.095 0.00 0.00 42.22 2.83
2451 2500 4.456566 AGTTACAAACGTTGTTGGACTGTT 59.543 37.500 0.00 0.00 42.22 3.16
2476 2525 6.685403 CGTTTGTTCAAAGAATTCGTACAACT 59.315 34.615 7.45 0.00 0.00 3.16
2483 2532 5.741982 ACCTTTCGTTTGTTCAAAGAATTCG 59.258 36.000 0.00 0.00 33.49 3.34
2491 2540 6.485313 ACTGATATCACCTTTCGTTTGTTCAA 59.515 34.615 0.00 0.00 0.00 2.69
2500 2549 4.568359 CCACTTCACTGATATCACCTTTCG 59.432 45.833 0.00 0.00 0.00 3.46
2501 2550 5.491982 ACCACTTCACTGATATCACCTTTC 58.508 41.667 0.00 0.00 0.00 2.62
2539 2588 5.248477 TGCTCCTCCAAAGTAAATAGAGTGT 59.752 40.000 0.00 0.00 0.00 3.55
2540 2589 5.734720 TGCTCCTCCAAAGTAAATAGAGTG 58.265 41.667 0.00 0.00 0.00 3.51
2623 2738 7.835822 TGAAGAACCTGAAATGAAGAAACAAA 58.164 30.769 0.00 0.00 0.00 2.83
2701 2816 1.451504 CCCATGCGAATCTGGGCTA 59.548 57.895 0.00 0.00 45.41 3.93
2705 2820 1.314534 TGTTGCCCATGCGAATCTGG 61.315 55.000 0.00 0.00 41.78 3.86
2802 2917 4.566488 CCTCACCTACTGCCAAATCTCTTT 60.566 45.833 0.00 0.00 0.00 2.52
3058 3173 4.211125 TCCAGTGCTGTTTTAACCATTCA 58.789 39.130 0.00 0.00 0.00 2.57
3137 3252 0.750249 TCACTTCGTTGTCCAGCAGA 59.250 50.000 0.00 0.00 0.00 4.26
3138 3253 1.261619 GTTCACTTCGTTGTCCAGCAG 59.738 52.381 0.00 0.00 0.00 4.24
3139 3254 1.295792 GTTCACTTCGTTGTCCAGCA 58.704 50.000 0.00 0.00 0.00 4.41
3574 3692 2.741878 CGGTGGTGAAGAACTTGACTGT 60.742 50.000 4.45 0.00 0.00 3.55
3616 3734 0.902984 TGCTGAAGCCGTCCCTCTTA 60.903 55.000 0.00 0.00 41.18 2.10
3637 3755 1.409427 GAGTACATTGTCTCCTCCCCG 59.591 57.143 0.00 0.00 0.00 5.73
3805 3923 6.421801 GTGGTTTTCTCAAAGGAATGAATGTG 59.578 38.462 0.00 0.00 0.00 3.21
3841 3959 3.681417 GGCTTTTCTGTGAAATTGATGCC 59.319 43.478 0.00 0.00 0.00 4.40
3978 4096 2.014128 CTGGAGAGAAGAGACGAGGAC 58.986 57.143 0.00 0.00 0.00 3.85
3982 4100 3.636153 TGATCTGGAGAGAAGAGACGA 57.364 47.619 0.00 0.00 0.00 4.20
3986 4104 7.345422 TCTTTGTATGATCTGGAGAGAAGAG 57.655 40.000 0.00 0.00 0.00 2.85
4096 4269 3.242518 CTCAAAGAATCGTCAGCACGTA 58.757 45.455 0.00 0.00 46.76 3.57
4100 4273 2.462456 AGCTCAAAGAATCGTCAGCA 57.538 45.000 3.70 0.00 0.00 4.41
4164 4337 8.513774 GTGATAATTCGTTTTAGGTTTTACCCA 58.486 33.333 0.00 0.00 39.75 4.51
4206 4379 2.038557 AGCGTACCTGACTGAAACCAAT 59.961 45.455 0.00 0.00 0.00 3.16
4230 4403 0.245539 CTGTGGCAAAGCATTCCTGG 59.754 55.000 0.00 0.00 0.00 4.45
4246 4472 0.322277 CTGATTGCCTGTCAGCCTGT 60.322 55.000 0.00 0.00 36.95 4.00
4247 4473 0.035725 TCTGATTGCCTGTCAGCCTG 60.036 55.000 0.00 0.00 42.17 4.85
4248 4474 0.035630 GTCTGATTGCCTGTCAGCCT 60.036 55.000 0.00 0.00 42.17 4.58
4249 4475 1.028868 GGTCTGATTGCCTGTCAGCC 61.029 60.000 0.00 6.54 42.17 4.85
4250 4476 0.035630 AGGTCTGATTGCCTGTCAGC 60.036 55.000 0.00 0.00 42.17 4.26
4251 4477 1.735386 CAGGTCTGATTGCCTGTCAG 58.265 55.000 4.97 0.00 45.28 3.51
4252 4478 3.942351 CAGGTCTGATTGCCTGTCA 57.058 52.632 4.97 0.00 45.28 3.58
4338 4564 4.144297 TCTAGCTTGCAAAACATGAAGGT 58.856 39.130 0.00 0.00 34.03 3.50
4344 4570 2.800250 AGGCTCTAGCTTGCAAAACAT 58.200 42.857 0.00 0.00 41.70 2.71
4368 4594 6.487668 CACCAAATAGAACAGGATGCATATGA 59.512 38.462 16.21 0.00 42.53 2.15
4410 4649 3.917329 AAGATCTCGACTCAACGTTGA 57.083 42.857 28.07 28.07 34.81 3.18
4444 4683 6.576662 TCTTTTAGACCACACACACAAAAA 57.423 33.333 0.00 0.00 0.00 1.94
4445 4684 6.576662 TTCTTTTAGACCACACACACAAAA 57.423 33.333 0.00 0.00 0.00 2.44
4447 4686 6.559810 CATTTCTTTTAGACCACACACACAA 58.440 36.000 0.00 0.00 0.00 3.33
4449 4688 4.976116 GCATTTCTTTTAGACCACACACAC 59.024 41.667 0.00 0.00 0.00 3.82
4451 4690 5.438761 AGCATTTCTTTTAGACCACACAC 57.561 39.130 0.00 0.00 0.00 3.82
4578 4819 6.089150 GTGTTCGTCTAGTACAGGAAAATGTC 59.911 42.308 0.00 0.00 34.56 3.06
4579 4820 5.924825 GTGTTCGTCTAGTACAGGAAAATGT 59.075 40.000 0.00 0.00 37.19 2.71
4587 4828 5.342525 GTGACAATGTGTTCGTCTAGTACAG 59.657 44.000 0.00 0.00 30.67 2.74
4713 4957 2.507339 AACCAAGTCCAAATTGTGCG 57.493 45.000 0.00 0.00 0.00 5.34
4717 4961 4.379652 CCCTTCAAACCAAGTCCAAATTG 58.620 43.478 0.00 0.00 0.00 2.32
4780 5024 1.185618 GCAAGGGGAAGGAACCAACC 61.186 60.000 0.00 0.00 0.00 3.77
4781 5025 0.178961 AGCAAGGGGAAGGAACCAAC 60.179 55.000 0.00 0.00 0.00 3.77
4782 5026 0.178964 CAGCAAGGGGAAGGAACCAA 60.179 55.000 0.00 0.00 0.00 3.67
4783 5027 1.460255 CAGCAAGGGGAAGGAACCA 59.540 57.895 0.00 0.00 0.00 3.67
4784 5028 1.979155 GCAGCAAGGGGAAGGAACC 60.979 63.158 0.00 0.00 0.00 3.62
4785 5029 0.540597 AAGCAGCAAGGGGAAGGAAC 60.541 55.000 0.00 0.00 0.00 3.62
4788 5032 2.042831 CGAAGCAGCAAGGGGAAGG 61.043 63.158 0.00 0.00 0.00 3.46
4789 5033 1.003355 TCGAAGCAGCAAGGGGAAG 60.003 57.895 0.00 0.00 0.00 3.46
5006 5252 0.035439 AAGTATGGCTGGGTGAACGG 60.035 55.000 0.00 0.00 0.00 4.44
5007 5253 1.086696 CAAGTATGGCTGGGTGAACG 58.913 55.000 0.00 0.00 0.00 3.95
5284 5537 1.830408 CGGGGAGAGAAGGCGAGAT 60.830 63.158 0.00 0.00 0.00 2.75
5367 5622 2.425975 GGGCATAGACCACCCTACTACT 60.426 54.545 0.00 0.00 40.75 2.57
5368 5623 1.969208 GGGCATAGACCACCCTACTAC 59.031 57.143 0.00 0.00 40.75 2.73
5369 5624 1.132945 GGGGCATAGACCACCCTACTA 60.133 57.143 0.00 0.00 43.68 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.