Multiple sequence alignment - TraesCS7B01G148300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G148300 chr7B 100.000 5916 0 0 1 5916 195765531 195771446 0.000000e+00 10925
1 TraesCS7B01G148300 chr7B 95.614 3739 141 14 1439 5168 77504351 77508075 0.000000e+00 5975
2 TraesCS7B01G148300 chr7B 90.544 2189 131 19 624 2759 629937493 629939658 0.000000e+00 2826
3 TraesCS7B01G148300 chr7B 94.826 831 31 2 5098 5916 77507948 77508778 0.000000e+00 1286
4 TraesCS7B01G148300 chr7B 94.231 832 33 4 5098 5916 117671962 117671133 0.000000e+00 1256
5 TraesCS7B01G148300 chr7B 91.538 839 54 6 402 1224 77501567 77502404 0.000000e+00 1140
6 TraesCS7B01G148300 chr7B 95.062 405 20 0 1 405 192718910 192719314 6.470000e-179 638
7 TraesCS7B01G148300 chr7D 94.626 4764 185 21 402 5109 110029821 110034569 0.000000e+00 7313
8 TraesCS7B01G148300 chr6D 94.381 4752 206 24 402 5109 365491893 365496627 0.000000e+00 7239
9 TraesCS7B01G148300 chr6D 95.343 773 22 4 5157 5916 30386794 30386023 0.000000e+00 1216
10 TraesCS7B01G148300 chr6D 94.825 773 27 3 5157 5916 43974621 43973849 0.000000e+00 1194
11 TraesCS7B01G148300 chr3B 92.546 4736 285 31 402 5097 220551180 220546473 0.000000e+00 6728
12 TraesCS7B01G148300 chr3B 92.489 4740 283 33 402 5097 219287313 219282603 0.000000e+00 6713
13 TraesCS7B01G148300 chr3B 95.360 819 36 1 5098 5916 106079916 106079100 0.000000e+00 1301
14 TraesCS7B01G148300 chr3B 94.699 830 33 1 5098 5916 170999829 170999000 0.000000e+00 1279
15 TraesCS7B01G148300 chr3B 94.612 761 35 4 5159 5916 747946582 747945825 0.000000e+00 1173
16 TraesCS7B01G148300 chr4B 91.827 4772 296 35 402 5109 639414219 639418960 0.000000e+00 6565
17 TraesCS7B01G148300 chr4B 92.447 4184 262 29 953 5109 62365719 62369875 0.000000e+00 5927
18 TraesCS7B01G148300 chr4B 95.874 412 17 0 1 412 9585812 9586223 0.000000e+00 667
19 TraesCS7B01G148300 chr4B 95.309 405 18 1 1 405 9608587 9608990 5.000000e-180 641
20 TraesCS7B01G148300 chr4B 93.651 252 16 0 5664 5915 62370164 62370415 1.560000e-100 377
21 TraesCS7B01G148300 chr1B 93.966 4027 216 18 1154 5167 35552934 35556946 0.000000e+00 6065
22 TraesCS7B01G148300 chr1B 93.967 4028 214 20 1154 5167 35599128 35603140 0.000000e+00 6065
23 TraesCS7B01G148300 chr1B 95.309 405 19 0 1 405 493844769 493844365 1.390000e-180 643
24 TraesCS7B01G148300 chr1B 95.062 405 20 0 1 405 106150427 106150831 6.470000e-179 638
25 TraesCS7B01G148300 chr1B 95.062 405 20 0 1 405 609226482 609226886 6.470000e-179 638
26 TraesCS7B01G148300 chr6B 91.968 4308 252 41 402 4630 94809010 94804718 0.000000e+00 5952
27 TraesCS7B01G148300 chr6B 95.238 819 39 0 5098 5916 146682405 146683223 0.000000e+00 1297
28 TraesCS7B01G148300 chr1D 95.185 3697 148 15 1178 4867 19592433 19588760 0.000000e+00 5814
29 TraesCS7B01G148300 chr1D 96.184 760 28 1 5157 5916 8593685 8594443 0.000000e+00 1242
30 TraesCS7B01G148300 chr5B 94.617 3307 144 14 1810 5093 16344803 16348098 0.000000e+00 5090
31 TraesCS7B01G148300 chr3A 92.257 1963 108 13 402 2353 724442289 724444218 0.000000e+00 2743
32 TraesCS7B01G148300 chr6A 92.210 1964 112 13 402 2358 557898685 557900614 0.000000e+00 2741
33 TraesCS7B01G148300 chr6A 93.017 802 46 5 402 1198 199227707 199226911 0.000000e+00 1162
34 TraesCS7B01G148300 chr7A 91.866 1967 113 21 402 2356 708406100 708404169 0.000000e+00 2702
35 TraesCS7B01G148300 chr3D 96.447 760 27 0 5157 5916 553645043 553645802 0.000000e+00 1254
36 TraesCS7B01G148300 chr3D 95.652 759 25 2 5161 5916 572929698 572928945 0.000000e+00 1212
37 TraesCS7B01G148300 chr4D 91.515 825 58 7 402 1220 449154287 449153469 0.000000e+00 1125
38 TraesCS7B01G148300 chr2B 96.020 402 16 0 3 404 785109255 785109656 0.000000e+00 654
39 TraesCS7B01G148300 chr2B 95.567 406 17 1 1 405 37753147 37753552 0.000000e+00 649
40 TraesCS7B01G148300 chr2B 95.074 406 19 1 1 405 38618120 38618525 6.470000e-179 638


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G148300 chr7B 195765531 195771446 5915 False 10925.000000 10925 100.000000 1 5916 1 chr7B.!!$F2 5915
1 TraesCS7B01G148300 chr7B 629937493 629939658 2165 False 2826.000000 2826 90.544000 624 2759 1 chr7B.!!$F3 2135
2 TraesCS7B01G148300 chr7B 77501567 77508778 7211 False 2800.333333 5975 93.992667 402 5916 3 chr7B.!!$F4 5514
3 TraesCS7B01G148300 chr7B 117671133 117671962 829 True 1256.000000 1256 94.231000 5098 5916 1 chr7B.!!$R1 818
4 TraesCS7B01G148300 chr7D 110029821 110034569 4748 False 7313.000000 7313 94.626000 402 5109 1 chr7D.!!$F1 4707
5 TraesCS7B01G148300 chr6D 365491893 365496627 4734 False 7239.000000 7239 94.381000 402 5109 1 chr6D.!!$F1 4707
6 TraesCS7B01G148300 chr6D 30386023 30386794 771 True 1216.000000 1216 95.343000 5157 5916 1 chr6D.!!$R1 759
7 TraesCS7B01G148300 chr6D 43973849 43974621 772 True 1194.000000 1194 94.825000 5157 5916 1 chr6D.!!$R2 759
8 TraesCS7B01G148300 chr3B 220546473 220551180 4707 True 6728.000000 6728 92.546000 402 5097 1 chr3B.!!$R4 4695
9 TraesCS7B01G148300 chr3B 219282603 219287313 4710 True 6713.000000 6713 92.489000 402 5097 1 chr3B.!!$R3 4695
10 TraesCS7B01G148300 chr3B 106079100 106079916 816 True 1301.000000 1301 95.360000 5098 5916 1 chr3B.!!$R1 818
11 TraesCS7B01G148300 chr3B 170999000 170999829 829 True 1279.000000 1279 94.699000 5098 5916 1 chr3B.!!$R2 818
12 TraesCS7B01G148300 chr3B 747945825 747946582 757 True 1173.000000 1173 94.612000 5159 5916 1 chr3B.!!$R5 757
13 TraesCS7B01G148300 chr4B 639414219 639418960 4741 False 6565.000000 6565 91.827000 402 5109 1 chr4B.!!$F3 4707
14 TraesCS7B01G148300 chr4B 62365719 62370415 4696 False 3152.000000 5927 93.049000 953 5915 2 chr4B.!!$F4 4962
15 TraesCS7B01G148300 chr1B 35552934 35556946 4012 False 6065.000000 6065 93.966000 1154 5167 1 chr1B.!!$F1 4013
16 TraesCS7B01G148300 chr1B 35599128 35603140 4012 False 6065.000000 6065 93.967000 1154 5167 1 chr1B.!!$F2 4013
17 TraesCS7B01G148300 chr6B 94804718 94809010 4292 True 5952.000000 5952 91.968000 402 4630 1 chr6B.!!$R1 4228
18 TraesCS7B01G148300 chr6B 146682405 146683223 818 False 1297.000000 1297 95.238000 5098 5916 1 chr6B.!!$F1 818
19 TraesCS7B01G148300 chr1D 19588760 19592433 3673 True 5814.000000 5814 95.185000 1178 4867 1 chr1D.!!$R1 3689
20 TraesCS7B01G148300 chr1D 8593685 8594443 758 False 1242.000000 1242 96.184000 5157 5916 1 chr1D.!!$F1 759
21 TraesCS7B01G148300 chr5B 16344803 16348098 3295 False 5090.000000 5090 94.617000 1810 5093 1 chr5B.!!$F1 3283
22 TraesCS7B01G148300 chr3A 724442289 724444218 1929 False 2743.000000 2743 92.257000 402 2353 1 chr3A.!!$F1 1951
23 TraesCS7B01G148300 chr6A 557898685 557900614 1929 False 2741.000000 2741 92.210000 402 2358 1 chr6A.!!$F1 1956
24 TraesCS7B01G148300 chr6A 199226911 199227707 796 True 1162.000000 1162 93.017000 402 1198 1 chr6A.!!$R1 796
25 TraesCS7B01G148300 chr7A 708404169 708406100 1931 True 2702.000000 2702 91.866000 402 2356 1 chr7A.!!$R1 1954
26 TraesCS7B01G148300 chr3D 553645043 553645802 759 False 1254.000000 1254 96.447000 5157 5916 1 chr3D.!!$F1 759
27 TraesCS7B01G148300 chr3D 572928945 572929698 753 True 1212.000000 1212 95.652000 5161 5916 1 chr3D.!!$R1 755
28 TraesCS7B01G148300 chr4D 449153469 449154287 818 True 1125.000000 1125 91.515000 402 1220 1 chr4D.!!$R1 818

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.035036 TGCCAACGGTCGGTCATTAA 59.965 50.000 0.00 0.00 0.00 1.40 F
285 286 0.035152 TCCGAGACGTAGGGCTGTTA 60.035 55.000 0.00 0.00 0.00 2.41 F
309 310 0.038159 CGTCGAGAAGGGCTTGAACT 60.038 55.000 0.00 0.00 38.75 3.01 F
1199 1355 0.179020 CAGGTGACTCCTTTGCCACA 60.179 55.000 0.00 0.00 45.67 4.17 F
2384 2641 0.709992 ATTTTTGGGGCAGGCTAGGA 59.290 50.000 0.00 0.00 0.00 2.94 F
2996 4967 2.740714 GGTGTTCGTCTGATGCGGC 61.741 63.158 0.00 0.00 0.00 6.53 F
4330 6333 1.152756 GGGTCCCACATGGCATACC 60.153 63.158 1.78 3.45 33.07 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1199 1355 1.276859 TGGCAGATGAGGCAGATGGT 61.277 55.000 0.00 0.00 39.34 3.55 R
1644 1837 2.086054 AGCGTGAGAGGCTAGTTTTG 57.914 50.000 0.00 0.00 37.59 2.44 R
1706 1900 4.949856 GGACTCCAGGAATCAAGCAATTTA 59.050 41.667 0.00 0.00 0.00 1.40 R
2399 2656 3.221964 TGATATGGAGTGCATCGATCG 57.778 47.619 9.36 9.36 0.00 3.69 R
4280 6283 0.620556 CCTATGGTGTGGCTGGAACT 59.379 55.000 0.00 0.00 0.00 3.01 R
4827 6849 1.552792 TGCATGGTTGATGGTACTCGA 59.447 47.619 0.00 0.00 31.99 4.04 R
5744 7834 1.444836 TGCAACGGCGCTTATTTAGT 58.555 45.000 6.90 0.00 45.35 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.590487 TCGACCATGAAGCGAACC 57.410 55.556 0.00 0.00 0.00 3.62
18 19 1.668867 TCGACCATGAAGCGAACCA 59.331 52.632 0.00 0.00 0.00 3.67
19 20 0.669318 TCGACCATGAAGCGAACCAC 60.669 55.000 0.00 0.00 0.00 4.16
20 21 0.670546 CGACCATGAAGCGAACCACT 60.671 55.000 0.00 0.00 0.00 4.00
21 22 1.403647 CGACCATGAAGCGAACCACTA 60.404 52.381 0.00 0.00 0.00 2.74
22 23 2.271800 GACCATGAAGCGAACCACTAG 58.728 52.381 0.00 0.00 0.00 2.57
23 24 1.899814 ACCATGAAGCGAACCACTAGA 59.100 47.619 0.00 0.00 0.00 2.43
24 25 2.271800 CCATGAAGCGAACCACTAGAC 58.728 52.381 0.00 0.00 0.00 2.59
25 26 1.920574 CATGAAGCGAACCACTAGACG 59.079 52.381 0.00 0.00 0.00 4.18
26 27 0.242825 TGAAGCGAACCACTAGACGG 59.757 55.000 0.00 0.00 0.00 4.79
27 28 1.077089 GAAGCGAACCACTAGACGGC 61.077 60.000 0.00 0.00 0.00 5.68
28 29 2.502692 AAGCGAACCACTAGACGGCC 62.503 60.000 0.00 0.00 0.00 6.13
29 30 2.967397 CGAACCACTAGACGGCCA 59.033 61.111 2.24 0.00 0.00 5.36
30 31 1.153823 CGAACCACTAGACGGCCAG 60.154 63.158 2.24 0.00 0.00 4.85
31 32 1.218316 GAACCACTAGACGGCCAGG 59.782 63.158 2.24 0.00 0.00 4.45
32 33 1.229082 AACCACTAGACGGCCAGGA 60.229 57.895 2.24 0.00 0.00 3.86
33 34 1.258445 AACCACTAGACGGCCAGGAG 61.258 60.000 2.24 0.00 0.00 3.69
34 35 1.379977 CCACTAGACGGCCAGGAGA 60.380 63.158 2.24 0.00 0.00 3.71
35 36 0.757188 CCACTAGACGGCCAGGAGAT 60.757 60.000 2.24 0.00 0.00 2.75
36 37 0.671251 CACTAGACGGCCAGGAGATC 59.329 60.000 2.24 0.00 0.00 2.75
37 38 0.553819 ACTAGACGGCCAGGAGATCT 59.446 55.000 2.24 0.00 0.00 2.75
38 39 1.775459 ACTAGACGGCCAGGAGATCTA 59.225 52.381 2.24 0.00 0.00 1.98
39 40 2.175069 ACTAGACGGCCAGGAGATCTAA 59.825 50.000 2.24 0.00 0.00 2.10
40 41 2.160721 AGACGGCCAGGAGATCTAAA 57.839 50.000 2.24 0.00 0.00 1.85
41 42 2.035632 AGACGGCCAGGAGATCTAAAG 58.964 52.381 2.24 0.00 0.00 1.85
42 43 1.757699 GACGGCCAGGAGATCTAAAGT 59.242 52.381 2.24 0.00 0.00 2.66
43 44 1.757699 ACGGCCAGGAGATCTAAAGTC 59.242 52.381 2.24 0.00 0.00 3.01
44 45 1.757118 CGGCCAGGAGATCTAAAGTCA 59.243 52.381 2.24 0.00 0.00 3.41
45 46 2.482142 CGGCCAGGAGATCTAAAGTCAC 60.482 54.545 2.24 0.00 0.00 3.67
46 47 2.769095 GGCCAGGAGATCTAAAGTCACT 59.231 50.000 0.00 0.00 0.00 3.41
47 48 3.181470 GGCCAGGAGATCTAAAGTCACTC 60.181 52.174 0.00 0.00 0.00 3.51
48 49 3.704061 GCCAGGAGATCTAAAGTCACTCT 59.296 47.826 0.00 0.00 0.00 3.24
49 50 4.441356 GCCAGGAGATCTAAAGTCACTCTG 60.441 50.000 0.00 0.00 0.00 3.35
50 51 4.441356 CCAGGAGATCTAAAGTCACTCTGC 60.441 50.000 0.00 0.00 0.00 4.26
51 52 4.159321 CAGGAGATCTAAAGTCACTCTGCA 59.841 45.833 0.00 0.00 0.00 4.41
52 53 4.961730 AGGAGATCTAAAGTCACTCTGCAT 59.038 41.667 0.00 0.00 0.00 3.96
53 54 5.049167 GGAGATCTAAAGTCACTCTGCATG 58.951 45.833 0.00 0.00 0.00 4.06
54 55 4.440880 AGATCTAAAGTCACTCTGCATGC 58.559 43.478 11.82 11.82 0.00 4.06
55 56 2.977914 TCTAAAGTCACTCTGCATGCC 58.022 47.619 16.68 0.00 0.00 4.40
56 57 2.302733 TCTAAAGTCACTCTGCATGCCA 59.697 45.455 16.68 0.00 0.00 4.92
57 58 1.985473 AAAGTCACTCTGCATGCCAA 58.015 45.000 16.68 1.63 0.00 4.52
58 59 1.242076 AAGTCACTCTGCATGCCAAC 58.758 50.000 16.68 4.29 0.00 3.77
59 60 0.952497 AGTCACTCTGCATGCCAACG 60.952 55.000 16.68 3.49 0.00 4.10
60 61 1.672030 TCACTCTGCATGCCAACGG 60.672 57.895 16.68 2.14 0.00 4.44
61 62 1.968017 CACTCTGCATGCCAACGGT 60.968 57.895 16.68 4.21 0.00 4.83
62 63 1.672356 ACTCTGCATGCCAACGGTC 60.672 57.895 16.68 0.00 0.00 4.79
63 64 2.741985 TCTGCATGCCAACGGTCG 60.742 61.111 16.68 0.00 0.00 4.79
64 65 3.803082 CTGCATGCCAACGGTCGG 61.803 66.667 16.68 0.00 0.00 4.79
65 66 4.634703 TGCATGCCAACGGTCGGT 62.635 61.111 16.68 0.00 0.00 4.69
66 67 3.799755 GCATGCCAACGGTCGGTC 61.800 66.667 6.36 0.00 0.00 4.79
67 68 2.358125 CATGCCAACGGTCGGTCA 60.358 61.111 0.00 0.00 0.00 4.02
68 69 1.745115 CATGCCAACGGTCGGTCAT 60.745 57.895 0.00 0.00 0.00 3.06
69 70 1.002624 ATGCCAACGGTCGGTCATT 60.003 52.632 0.00 0.00 0.00 2.57
70 71 0.250793 ATGCCAACGGTCGGTCATTA 59.749 50.000 0.00 0.00 0.00 1.90
71 72 0.035036 TGCCAACGGTCGGTCATTAA 59.965 50.000 0.00 0.00 0.00 1.40
72 73 0.725117 GCCAACGGTCGGTCATTAAG 59.275 55.000 0.00 0.00 0.00 1.85
73 74 1.942586 GCCAACGGTCGGTCATTAAGT 60.943 52.381 0.00 0.00 0.00 2.24
74 75 2.674747 GCCAACGGTCGGTCATTAAGTA 60.675 50.000 0.00 0.00 0.00 2.24
75 76 3.184541 CCAACGGTCGGTCATTAAGTAG 58.815 50.000 0.00 0.00 0.00 2.57
76 77 2.573941 ACGGTCGGTCATTAAGTAGC 57.426 50.000 0.00 0.00 0.00 3.58
77 78 2.097825 ACGGTCGGTCATTAAGTAGCT 58.902 47.619 0.00 0.00 0.00 3.32
78 79 2.494870 ACGGTCGGTCATTAAGTAGCTT 59.505 45.455 0.00 0.00 0.00 3.74
79 80 3.056322 ACGGTCGGTCATTAAGTAGCTTT 60.056 43.478 0.00 0.00 0.00 3.51
80 81 3.930848 CGGTCGGTCATTAAGTAGCTTTT 59.069 43.478 0.00 0.00 0.00 2.27
81 82 5.104374 CGGTCGGTCATTAAGTAGCTTTTA 58.896 41.667 0.00 0.00 0.00 1.52
82 83 5.751990 CGGTCGGTCATTAAGTAGCTTTTAT 59.248 40.000 0.00 0.00 0.00 1.40
83 84 6.292168 CGGTCGGTCATTAAGTAGCTTTTATG 60.292 42.308 0.00 0.00 0.00 1.90
84 85 6.018180 GGTCGGTCATTAAGTAGCTTTTATGG 60.018 42.308 0.00 0.00 0.00 2.74
85 86 6.537660 GTCGGTCATTAAGTAGCTTTTATGGT 59.462 38.462 0.00 0.00 0.00 3.55
86 87 6.759827 TCGGTCATTAAGTAGCTTTTATGGTC 59.240 38.462 0.00 0.00 0.00 4.02
87 88 6.537301 CGGTCATTAAGTAGCTTTTATGGTCA 59.463 38.462 0.00 0.00 0.00 4.02
88 89 7.226720 CGGTCATTAAGTAGCTTTTATGGTCAT 59.773 37.037 0.00 0.00 0.00 3.06
89 90 8.560374 GGTCATTAAGTAGCTTTTATGGTCATC 58.440 37.037 0.00 0.00 0.00 2.92
90 91 9.109393 GTCATTAAGTAGCTTTTATGGTCATCA 57.891 33.333 0.00 0.00 0.00 3.07
91 92 9.851686 TCATTAAGTAGCTTTTATGGTCATCAT 57.148 29.630 0.00 0.00 39.78 2.45
96 97 8.438676 AGTAGCTTTTATGGTCATCATAACAC 57.561 34.615 0.00 0.00 45.11 3.32
97 98 8.267894 AGTAGCTTTTATGGTCATCATAACACT 58.732 33.333 0.00 0.00 45.11 3.55
98 99 7.944729 AGCTTTTATGGTCATCATAACACTT 57.055 32.000 0.00 0.00 45.11 3.16
99 100 8.353423 AGCTTTTATGGTCATCATAACACTTT 57.647 30.769 0.00 0.00 45.11 2.66
100 101 9.461312 AGCTTTTATGGTCATCATAACACTTTA 57.539 29.630 0.00 0.00 45.11 1.85
108 109 9.489084 TGGTCATCATAACACTTTATGTATAGC 57.511 33.333 4.70 2.83 42.31 2.97
109 110 8.648097 GGTCATCATAACACTTTATGTATAGCG 58.352 37.037 4.70 0.00 42.31 4.26
110 111 9.193133 GTCATCATAACACTTTATGTATAGCGT 57.807 33.333 4.70 0.00 42.31 5.07
111 112 9.758651 TCATCATAACACTTTATGTATAGCGTT 57.241 29.630 4.70 0.00 42.31 4.84
114 115 9.467258 TCATAACACTTTATGTATAGCGTTACC 57.533 33.333 4.70 0.00 42.31 2.85
115 116 9.251792 CATAACACTTTATGTATAGCGTTACCA 57.748 33.333 0.00 0.00 42.31 3.25
116 117 7.766219 AACACTTTATGTATAGCGTTACCAG 57.234 36.000 0.00 0.00 42.31 4.00
117 118 6.870769 ACACTTTATGTATAGCGTTACCAGT 58.129 36.000 0.00 0.00 40.88 4.00
118 119 7.999679 ACACTTTATGTATAGCGTTACCAGTA 58.000 34.615 0.00 0.00 40.88 2.74
119 120 8.469200 ACACTTTATGTATAGCGTTACCAGTAA 58.531 33.333 0.00 0.00 40.88 2.24
120 121 8.749499 CACTTTATGTATAGCGTTACCAGTAAC 58.251 37.037 10.09 10.09 41.37 2.50
128 129 1.159285 GTTACCAGTAACGCCCAACC 58.841 55.000 5.02 0.00 36.47 3.77
129 130 1.058284 TTACCAGTAACGCCCAACCT 58.942 50.000 0.00 0.00 0.00 3.50
130 131 1.058284 TACCAGTAACGCCCAACCTT 58.942 50.000 0.00 0.00 0.00 3.50
131 132 1.058284 ACCAGTAACGCCCAACCTTA 58.942 50.000 0.00 0.00 0.00 2.69
132 133 1.420891 ACCAGTAACGCCCAACCTTAA 59.579 47.619 0.00 0.00 0.00 1.85
133 134 2.040679 ACCAGTAACGCCCAACCTTAAT 59.959 45.455 0.00 0.00 0.00 1.40
134 135 2.422127 CCAGTAACGCCCAACCTTAATG 59.578 50.000 0.00 0.00 0.00 1.90
135 136 3.078837 CAGTAACGCCCAACCTTAATGT 58.921 45.455 0.00 0.00 0.00 2.71
136 137 4.255301 CAGTAACGCCCAACCTTAATGTA 58.745 43.478 0.00 0.00 0.00 2.29
137 138 4.879545 CAGTAACGCCCAACCTTAATGTAT 59.120 41.667 0.00 0.00 0.00 2.29
138 139 5.007332 CAGTAACGCCCAACCTTAATGTATC 59.993 44.000 0.00 0.00 0.00 2.24
139 140 3.926058 ACGCCCAACCTTAATGTATCT 57.074 42.857 0.00 0.00 0.00 1.98
140 141 4.230745 ACGCCCAACCTTAATGTATCTT 57.769 40.909 0.00 0.00 0.00 2.40
141 142 5.362105 ACGCCCAACCTTAATGTATCTTA 57.638 39.130 0.00 0.00 0.00 2.10
142 143 5.747342 ACGCCCAACCTTAATGTATCTTAA 58.253 37.500 0.00 0.00 0.00 1.85
143 144 6.181908 ACGCCCAACCTTAATGTATCTTAAA 58.818 36.000 0.00 0.00 0.00 1.52
144 145 6.094464 ACGCCCAACCTTAATGTATCTTAAAC 59.906 38.462 0.00 0.00 0.00 2.01
145 146 6.459161 CGCCCAACCTTAATGTATCTTAAACC 60.459 42.308 0.00 0.00 0.00 3.27
146 147 6.183360 GCCCAACCTTAATGTATCTTAAACCC 60.183 42.308 0.00 0.00 0.00 4.11
147 148 7.123383 CCCAACCTTAATGTATCTTAAACCCT 58.877 38.462 0.00 0.00 0.00 4.34
148 149 7.068226 CCCAACCTTAATGTATCTTAAACCCTG 59.932 40.741 0.00 0.00 0.00 4.45
149 150 7.416326 CCAACCTTAATGTATCTTAAACCCTGC 60.416 40.741 0.00 0.00 0.00 4.85
150 151 6.727394 ACCTTAATGTATCTTAAACCCTGCA 58.273 36.000 0.00 0.00 0.00 4.41
151 152 7.354312 ACCTTAATGTATCTTAAACCCTGCAT 58.646 34.615 0.00 0.00 0.00 3.96
152 153 8.499406 ACCTTAATGTATCTTAAACCCTGCATA 58.501 33.333 0.00 0.00 0.00 3.14
153 154 9.349713 CCTTAATGTATCTTAAACCCTGCATAA 57.650 33.333 0.00 0.00 0.00 1.90
155 156 9.914834 TTAATGTATCTTAAACCCTGCATAACT 57.085 29.630 0.00 0.00 0.00 2.24
156 157 7.807977 ATGTATCTTAAACCCTGCATAACTG 57.192 36.000 0.00 0.00 0.00 3.16
157 158 6.953101 TGTATCTTAAACCCTGCATAACTGA 58.047 36.000 0.00 0.00 0.00 3.41
158 159 7.047891 TGTATCTTAAACCCTGCATAACTGAG 58.952 38.462 0.00 0.00 0.00 3.35
159 160 4.843728 TCTTAAACCCTGCATAACTGAGG 58.156 43.478 0.00 0.00 0.00 3.86
162 163 3.788672 CCCTGCATAACTGAGGGTC 57.211 57.895 0.00 0.00 41.58 4.46
163 164 0.179073 CCCTGCATAACTGAGGGTCG 60.179 60.000 0.00 0.00 41.58 4.79
164 165 0.179073 CCTGCATAACTGAGGGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
165 166 0.824109 CTGCATAACTGAGGGTCGGA 59.176 55.000 0.00 0.00 0.00 4.55
166 167 0.824109 TGCATAACTGAGGGTCGGAG 59.176 55.000 0.00 0.00 0.00 4.63
167 168 0.105039 GCATAACTGAGGGTCGGAGG 59.895 60.000 0.00 0.00 0.00 4.30
168 169 0.753262 CATAACTGAGGGTCGGAGGG 59.247 60.000 0.00 0.00 0.00 4.30
169 170 0.398664 ATAACTGAGGGTCGGAGGGG 60.399 60.000 0.00 0.00 0.00 4.79
184 185 2.844839 GGGCCTGGCGGACTCTAT 60.845 66.667 13.40 0.00 38.87 1.98
185 186 1.533273 GGGCCTGGCGGACTCTATA 60.533 63.158 13.40 0.00 38.87 1.31
186 187 0.905337 GGGCCTGGCGGACTCTATAT 60.905 60.000 13.40 0.00 38.87 0.86
187 188 1.618888 GGGCCTGGCGGACTCTATATA 60.619 57.143 13.40 0.00 38.87 0.86
188 189 2.176889 GGCCTGGCGGACTCTATATAA 58.823 52.381 13.40 0.00 34.48 0.98
189 190 2.166664 GGCCTGGCGGACTCTATATAAG 59.833 54.545 13.40 0.00 34.48 1.73
190 191 2.417515 GCCTGGCGGACTCTATATAAGC 60.418 54.545 1.35 0.00 0.00 3.09
191 192 2.166664 CCTGGCGGACTCTATATAAGCC 59.833 54.545 0.00 0.00 43.05 4.35
193 194 2.561419 TGGCGGACTCTATATAAGCCAC 59.439 50.000 1.80 0.00 46.73 5.01
194 195 2.094130 GGCGGACTCTATATAAGCCACC 60.094 54.545 0.00 0.00 42.37 4.61
195 196 2.094130 GCGGACTCTATATAAGCCACCC 60.094 54.545 0.00 0.00 0.00 4.61
196 197 2.496470 CGGACTCTATATAAGCCACCCC 59.504 54.545 0.00 0.00 0.00 4.95
197 198 2.838813 GGACTCTATATAAGCCACCCCC 59.161 54.545 0.00 0.00 0.00 5.40
213 214 0.912486 CCCCCTCCTCAGTGTAAAGG 59.088 60.000 0.00 0.00 0.00 3.11
214 215 0.912486 CCCCTCCTCAGTGTAAAGGG 59.088 60.000 15.42 15.42 45.34 3.95
215 216 1.657804 CCCTCCTCAGTGTAAAGGGT 58.342 55.000 14.59 0.00 41.56 4.34
216 217 1.985895 CCCTCCTCAGTGTAAAGGGTT 59.014 52.381 14.59 0.00 41.56 4.11
217 218 2.027100 CCCTCCTCAGTGTAAAGGGTTC 60.027 54.545 14.59 0.00 41.56 3.62
218 219 2.637872 CCTCCTCAGTGTAAAGGGTTCA 59.362 50.000 0.00 0.00 33.21 3.18
219 220 3.557264 CCTCCTCAGTGTAAAGGGTTCAC 60.557 52.174 0.00 0.00 33.21 3.18
220 221 3.042682 TCCTCAGTGTAAAGGGTTCACA 58.957 45.455 0.00 0.00 34.94 3.58
221 222 3.139077 CCTCAGTGTAAAGGGTTCACAC 58.861 50.000 0.00 0.00 42.27 3.82
222 223 3.139077 CTCAGTGTAAAGGGTTCACACC 58.861 50.000 0.00 0.00 42.81 4.16
233 234 3.202829 GGTTCACACCCTTGTAACTCA 57.797 47.619 0.00 0.00 37.03 3.41
234 235 3.751518 GGTTCACACCCTTGTAACTCAT 58.248 45.455 0.00 0.00 37.03 2.90
235 236 4.901868 GGTTCACACCCTTGTAACTCATA 58.098 43.478 0.00 0.00 37.03 2.15
236 237 4.694037 GGTTCACACCCTTGTAACTCATAC 59.306 45.833 0.00 0.00 37.03 2.39
237 238 4.182693 TCACACCCTTGTAACTCATACG 57.817 45.455 0.00 0.00 37.32 3.06
238 239 2.671396 CACACCCTTGTAACTCATACGC 59.329 50.000 0.00 0.00 37.32 4.42
239 240 2.300723 ACACCCTTGTAACTCATACGCA 59.699 45.455 0.00 0.00 37.32 5.24
240 241 3.055385 ACACCCTTGTAACTCATACGCAT 60.055 43.478 0.00 0.00 37.32 4.73
241 242 4.160814 ACACCCTTGTAACTCATACGCATA 59.839 41.667 0.00 0.00 37.32 3.14
242 243 5.163343 ACACCCTTGTAACTCATACGCATAT 60.163 40.000 0.00 0.00 37.32 1.78
243 244 6.041182 ACACCCTTGTAACTCATACGCATATA 59.959 38.462 0.00 0.00 37.32 0.86
244 245 6.926826 CACCCTTGTAACTCATACGCATATAA 59.073 38.462 0.00 0.00 37.32 0.98
245 246 7.602644 CACCCTTGTAACTCATACGCATATAAT 59.397 37.037 0.00 0.00 37.32 1.28
246 247 7.817962 ACCCTTGTAACTCATACGCATATAATC 59.182 37.037 0.00 0.00 37.32 1.75
247 248 7.277981 CCCTTGTAACTCATACGCATATAATCC 59.722 40.741 0.00 0.00 37.32 3.01
248 249 7.817478 CCTTGTAACTCATACGCATATAATCCA 59.183 37.037 0.00 0.00 37.32 3.41
249 250 8.757164 TTGTAACTCATACGCATATAATCCAG 57.243 34.615 0.00 0.00 37.32 3.86
250 251 7.892609 TGTAACTCATACGCATATAATCCAGT 58.107 34.615 0.00 0.00 37.32 4.00
251 252 8.027189 TGTAACTCATACGCATATAATCCAGTC 58.973 37.037 0.00 0.00 37.32 3.51
252 253 5.641709 ACTCATACGCATATAATCCAGTCG 58.358 41.667 0.00 0.00 0.00 4.18
253 254 5.414765 ACTCATACGCATATAATCCAGTCGA 59.585 40.000 0.00 0.00 0.00 4.20
254 255 5.637809 TCATACGCATATAATCCAGTCGAC 58.362 41.667 7.70 7.70 0.00 4.20
255 256 3.299340 ACGCATATAATCCAGTCGACC 57.701 47.619 13.01 0.00 0.00 4.79
256 257 2.251040 CGCATATAATCCAGTCGACCG 58.749 52.381 13.01 0.70 0.00 4.79
257 258 1.993370 GCATATAATCCAGTCGACCGC 59.007 52.381 13.01 0.00 0.00 5.68
258 259 2.607187 CATATAATCCAGTCGACCGCC 58.393 52.381 13.01 0.00 0.00 6.13
259 260 1.991121 TATAATCCAGTCGACCGCCT 58.009 50.000 13.01 0.00 0.00 5.52
260 261 1.991121 ATAATCCAGTCGACCGCCTA 58.009 50.000 13.01 0.00 0.00 3.93
261 262 1.027357 TAATCCAGTCGACCGCCTAC 58.973 55.000 13.01 0.00 0.00 3.18
262 263 2.001361 AATCCAGTCGACCGCCTACG 62.001 60.000 13.01 0.00 39.67 3.51
279 280 3.217743 GGGCTCCGAGACGTAGGG 61.218 72.222 0.00 0.00 0.00 3.53
280 281 3.902086 GGCTCCGAGACGTAGGGC 61.902 72.222 0.00 0.00 0.00 5.19
281 282 2.829458 GCTCCGAGACGTAGGGCT 60.829 66.667 0.00 0.00 0.00 5.19
282 283 3.111939 CTCCGAGACGTAGGGCTG 58.888 66.667 0.00 0.00 0.00 4.85
283 284 1.749638 CTCCGAGACGTAGGGCTGT 60.750 63.158 0.00 0.00 0.00 4.40
284 285 1.303888 TCCGAGACGTAGGGCTGTT 60.304 57.895 0.00 0.00 0.00 3.16
285 286 0.035152 TCCGAGACGTAGGGCTGTTA 60.035 55.000 0.00 0.00 0.00 2.41
286 287 0.100146 CCGAGACGTAGGGCTGTTAC 59.900 60.000 0.00 0.00 0.00 2.50
287 288 1.093159 CGAGACGTAGGGCTGTTACT 58.907 55.000 0.00 0.00 0.00 2.24
288 289 1.471684 CGAGACGTAGGGCTGTTACTT 59.528 52.381 0.00 0.00 0.00 2.24
289 290 2.477525 CGAGACGTAGGGCTGTTACTTC 60.478 54.545 0.00 0.00 0.00 3.01
290 291 1.823610 AGACGTAGGGCTGTTACTTCC 59.176 52.381 0.00 0.00 0.00 3.46
291 292 0.529378 ACGTAGGGCTGTTACTTCCG 59.471 55.000 0.00 0.00 0.00 4.30
292 293 0.529378 CGTAGGGCTGTTACTTCCGT 59.471 55.000 0.00 0.00 0.00 4.69
293 294 1.468736 CGTAGGGCTGTTACTTCCGTC 60.469 57.143 0.00 0.00 0.00 4.79
294 295 0.813184 TAGGGCTGTTACTTCCGTCG 59.187 55.000 0.00 0.00 0.00 5.12
295 296 0.896940 AGGGCTGTTACTTCCGTCGA 60.897 55.000 0.00 0.00 0.00 4.20
296 297 0.458025 GGGCTGTTACTTCCGTCGAG 60.458 60.000 0.00 0.00 0.00 4.04
297 298 0.524862 GGCTGTTACTTCCGTCGAGA 59.475 55.000 0.00 0.00 0.00 4.04
298 299 1.068055 GGCTGTTACTTCCGTCGAGAA 60.068 52.381 0.00 0.00 0.00 2.87
300 301 2.864968 CTGTTACTTCCGTCGAGAAGG 58.135 52.381 20.40 7.17 46.24 3.46
301 302 1.542915 TGTTACTTCCGTCGAGAAGGG 59.457 52.381 20.40 2.97 46.24 3.95
302 303 0.529378 TTACTTCCGTCGAGAAGGGC 59.471 55.000 20.40 0.00 46.24 5.19
303 304 0.323178 TACTTCCGTCGAGAAGGGCT 60.323 55.000 20.40 8.40 46.24 5.19
304 305 1.186267 ACTTCCGTCGAGAAGGGCTT 61.186 55.000 20.40 4.43 46.24 4.35
305 306 0.737715 CTTCCGTCGAGAAGGGCTTG 60.738 60.000 12.85 0.00 39.71 4.01
306 307 1.183030 TTCCGTCGAGAAGGGCTTGA 61.183 55.000 5.30 0.00 34.56 3.02
307 308 1.183030 TCCGTCGAGAAGGGCTTGAA 61.183 55.000 5.30 0.00 38.75 2.69
308 309 1.014564 CCGTCGAGAAGGGCTTGAAC 61.015 60.000 0.00 0.00 38.75 3.18
309 310 0.038159 CGTCGAGAAGGGCTTGAACT 60.038 55.000 0.00 0.00 38.75 3.01
310 311 1.715993 GTCGAGAAGGGCTTGAACTC 58.284 55.000 0.00 0.00 38.75 3.01
311 312 2.743195 CGAGAAGGGCTTGAACTCG 58.257 57.895 0.00 0.00 42.77 4.18
312 313 0.038159 CGAGAAGGGCTTGAACTCGT 60.038 55.000 0.00 0.00 43.19 4.18
313 314 1.201647 CGAGAAGGGCTTGAACTCGTA 59.798 52.381 0.00 0.00 43.19 3.43
314 315 2.352421 CGAGAAGGGCTTGAACTCGTAA 60.352 50.000 0.00 0.00 43.19 3.18
315 316 3.660865 GAGAAGGGCTTGAACTCGTAAA 58.339 45.455 0.00 0.00 0.00 2.01
316 317 4.254492 GAGAAGGGCTTGAACTCGTAAAT 58.746 43.478 0.00 0.00 0.00 1.40
317 318 4.254492 AGAAGGGCTTGAACTCGTAAATC 58.746 43.478 0.00 0.00 0.00 2.17
318 319 3.983044 AGGGCTTGAACTCGTAAATCT 57.017 42.857 0.00 0.00 0.00 2.40
319 320 3.863041 AGGGCTTGAACTCGTAAATCTC 58.137 45.455 0.00 0.00 0.00 2.75
320 321 3.515901 AGGGCTTGAACTCGTAAATCTCT 59.484 43.478 0.00 0.00 0.00 3.10
321 322 4.020128 AGGGCTTGAACTCGTAAATCTCTT 60.020 41.667 0.00 0.00 0.00 2.85
322 323 4.093556 GGGCTTGAACTCGTAAATCTCTTG 59.906 45.833 0.00 0.00 0.00 3.02
323 324 4.436183 GGCTTGAACTCGTAAATCTCTTGC 60.436 45.833 0.00 0.00 0.00 4.01
324 325 4.722346 GCTTGAACTCGTAAATCTCTTGCG 60.722 45.833 0.00 0.00 0.00 4.85
325 326 3.909430 TGAACTCGTAAATCTCTTGCGT 58.091 40.909 0.00 0.00 0.00 5.24
326 327 5.050644 TGAACTCGTAAATCTCTTGCGTA 57.949 39.130 0.00 0.00 0.00 4.42
327 328 5.647589 TGAACTCGTAAATCTCTTGCGTAT 58.352 37.500 0.00 0.00 0.00 3.06
328 329 6.788243 TGAACTCGTAAATCTCTTGCGTATA 58.212 36.000 0.00 0.00 0.00 1.47
329 330 6.690098 TGAACTCGTAAATCTCTTGCGTATAC 59.310 38.462 0.00 0.00 0.00 1.47
330 331 6.127810 ACTCGTAAATCTCTTGCGTATACA 57.872 37.500 3.32 0.00 0.00 2.29
331 332 6.558009 ACTCGTAAATCTCTTGCGTATACAA 58.442 36.000 3.32 0.00 0.00 2.41
332 333 6.471519 ACTCGTAAATCTCTTGCGTATACAAC 59.528 38.462 3.32 0.00 0.00 3.32
333 334 6.558009 TCGTAAATCTCTTGCGTATACAACT 58.442 36.000 3.32 0.00 0.00 3.16
334 335 7.696755 TCGTAAATCTCTTGCGTATACAACTA 58.303 34.615 3.32 0.00 0.00 2.24
335 336 7.641411 TCGTAAATCTCTTGCGTATACAACTAC 59.359 37.037 3.32 0.00 0.00 2.73
336 337 7.642978 CGTAAATCTCTTGCGTATACAACTACT 59.357 37.037 3.32 0.00 0.00 2.57
337 338 7.988904 AAATCTCTTGCGTATACAACTACTC 57.011 36.000 3.32 0.00 0.00 2.59
338 339 5.496133 TCTCTTGCGTATACAACTACTCC 57.504 43.478 3.32 0.00 0.00 3.85
339 340 4.945543 TCTCTTGCGTATACAACTACTCCA 59.054 41.667 3.32 0.00 0.00 3.86
340 341 5.593095 TCTCTTGCGTATACAACTACTCCAT 59.407 40.000 3.32 0.00 0.00 3.41
341 342 6.769341 TCTCTTGCGTATACAACTACTCCATA 59.231 38.462 3.32 0.00 0.00 2.74
342 343 6.967135 TCTTGCGTATACAACTACTCCATAG 58.033 40.000 3.32 0.00 36.89 2.23
343 344 5.117355 TGCGTATACAACTACTCCATAGC 57.883 43.478 3.32 0.00 33.73 2.97
344 345 4.825634 TGCGTATACAACTACTCCATAGCT 59.174 41.667 3.32 0.00 33.73 3.32
345 346 5.999600 TGCGTATACAACTACTCCATAGCTA 59.000 40.000 3.32 0.00 33.73 3.32
346 347 6.148976 TGCGTATACAACTACTCCATAGCTAG 59.851 42.308 3.32 0.00 33.73 3.42
347 348 6.403418 GCGTATACAACTACTCCATAGCTAGG 60.403 46.154 3.32 0.00 33.73 3.02
348 349 6.877855 CGTATACAACTACTCCATAGCTAGGA 59.122 42.308 7.04 9.11 33.73 2.94
349 350 7.553402 CGTATACAACTACTCCATAGCTAGGAT 59.447 40.741 7.04 3.93 33.99 3.24
350 351 7.948034 ATACAACTACTCCATAGCTAGGATC 57.052 40.000 7.04 0.00 33.99 3.36
351 352 5.959512 ACAACTACTCCATAGCTAGGATCT 58.040 41.667 7.04 1.88 33.99 2.75
352 353 6.377912 ACAACTACTCCATAGCTAGGATCTT 58.622 40.000 7.04 1.36 33.99 2.40
353 354 6.266558 ACAACTACTCCATAGCTAGGATCTTG 59.733 42.308 7.04 10.26 33.99 3.02
354 355 4.770010 ACTACTCCATAGCTAGGATCTTGC 59.230 45.833 7.04 0.00 33.99 4.01
355 356 2.903135 ACTCCATAGCTAGGATCTTGCC 59.097 50.000 7.04 0.00 33.03 4.52
356 357 3.172339 CTCCATAGCTAGGATCTTGCCT 58.828 50.000 7.04 0.00 42.15 4.75
357 358 3.169099 TCCATAGCTAGGATCTTGCCTC 58.831 50.000 7.04 0.00 39.50 4.70
358 359 3.172339 CCATAGCTAGGATCTTGCCTCT 58.828 50.000 7.04 0.00 39.50 3.69
359 360 3.195396 CCATAGCTAGGATCTTGCCTCTC 59.805 52.174 7.04 0.00 39.50 3.20
360 361 1.715785 AGCTAGGATCTTGCCTCTCC 58.284 55.000 0.00 0.00 39.50 3.71
361 362 1.062581 AGCTAGGATCTTGCCTCTCCA 60.063 52.381 0.00 0.00 39.50 3.86
362 363 1.977129 GCTAGGATCTTGCCTCTCCAT 59.023 52.381 0.00 0.00 39.50 3.41
363 364 2.371510 GCTAGGATCTTGCCTCTCCATT 59.628 50.000 0.00 0.00 39.50 3.16
364 365 3.580458 GCTAGGATCTTGCCTCTCCATTA 59.420 47.826 0.00 0.00 39.50 1.90
365 366 4.322650 GCTAGGATCTTGCCTCTCCATTAG 60.323 50.000 0.00 0.00 39.50 1.73
366 367 3.663198 AGGATCTTGCCTCTCCATTAGT 58.337 45.455 0.00 0.00 30.76 2.24
367 368 4.820775 AGGATCTTGCCTCTCCATTAGTA 58.179 43.478 0.00 0.00 30.76 1.82
368 369 4.591072 AGGATCTTGCCTCTCCATTAGTAC 59.409 45.833 0.00 0.00 30.76 2.73
369 370 4.262678 GGATCTTGCCTCTCCATTAGTACC 60.263 50.000 0.00 0.00 0.00 3.34
370 371 3.039011 TCTTGCCTCTCCATTAGTACCC 58.961 50.000 0.00 0.00 0.00 3.69
371 372 1.802553 TGCCTCTCCATTAGTACCCC 58.197 55.000 0.00 0.00 0.00 4.95
372 373 1.057471 GCCTCTCCATTAGTACCCCC 58.943 60.000 0.00 0.00 0.00 5.40
390 391 4.456662 CCCCCTACACTACTATCAGACT 57.543 50.000 0.00 0.00 0.00 3.24
391 392 4.805744 CCCCCTACACTACTATCAGACTT 58.194 47.826 0.00 0.00 0.00 3.01
392 393 5.950023 CCCCCTACACTACTATCAGACTTA 58.050 45.833 0.00 0.00 0.00 2.24
393 394 6.005198 CCCCCTACACTACTATCAGACTTAG 58.995 48.000 0.00 0.00 0.00 2.18
394 395 6.183361 CCCCCTACACTACTATCAGACTTAGA 60.183 46.154 0.00 0.00 0.00 2.10
395 396 7.288560 CCCCTACACTACTATCAGACTTAGAA 58.711 42.308 0.00 0.00 0.00 2.10
396 397 7.229106 CCCCTACACTACTATCAGACTTAGAAC 59.771 44.444 0.00 0.00 0.00 3.01
397 398 7.229106 CCCTACACTACTATCAGACTTAGAACC 59.771 44.444 0.00 0.00 0.00 3.62
398 399 7.774157 CCTACACTACTATCAGACTTAGAACCA 59.226 40.741 0.00 0.00 0.00 3.67
399 400 9.344772 CTACACTACTATCAGACTTAGAACCAT 57.655 37.037 0.00 0.00 0.00 3.55
400 401 8.001881 ACACTACTATCAGACTTAGAACCATG 57.998 38.462 0.00 0.00 0.00 3.66
401 402 7.834681 ACACTACTATCAGACTTAGAACCATGA 59.165 37.037 0.00 0.00 0.00 3.07
402 403 8.132362 CACTACTATCAGACTTAGAACCATGAC 58.868 40.741 0.00 0.00 0.00 3.06
403 404 7.834681 ACTACTATCAGACTTAGAACCATGACA 59.165 37.037 0.00 0.00 0.00 3.58
404 405 7.106439 ACTATCAGACTTAGAACCATGACAG 57.894 40.000 0.00 0.00 0.00 3.51
405 406 4.808414 TCAGACTTAGAACCATGACAGG 57.192 45.455 0.00 0.00 0.00 4.00
461 462 4.686972 CGAACATCGGATATATGGCAGAT 58.313 43.478 0.00 0.00 36.00 2.90
469 470 4.442052 CGGATATATGGCAGATGAATCCGT 60.442 45.833 26.68 0.00 45.73 4.69
619 620 5.305902 TCCCACTGTATGACTTTGTTCTGTA 59.694 40.000 0.00 0.00 0.00 2.74
716 734 6.049149 CGGGCTATTCATTTTAGTGAGAAGA 58.951 40.000 0.00 0.00 0.00 2.87
742 760 2.614983 AGTTACGTTTTGACGTGCCAAT 59.385 40.909 14.12 0.00 46.53 3.16
784 802 2.513259 GGGGAGGTGTGAACGTGGA 61.513 63.158 0.00 0.00 0.00 4.02
870 900 5.713861 GCTTCCCCATAGCATTTATCTCATT 59.286 40.000 0.00 0.00 38.51 2.57
880 913 1.640593 TTATCTCATTGCCGCCCCCA 61.641 55.000 0.00 0.00 0.00 4.96
885 918 3.661648 ATTGCCGCCCCCACTTCT 61.662 61.111 0.00 0.00 0.00 2.85
1084 1161 2.942710 CAAAGCTGCACATGGAGAAAG 58.057 47.619 4.37 0.00 35.31 2.62
1097 1174 0.686769 GAGAAAGCCCTCCCTACCGA 60.687 60.000 0.00 0.00 0.00 4.69
1192 1348 1.835927 GCCAGAGCAGGTGACTCCTT 61.836 60.000 0.00 0.00 45.67 3.36
1199 1355 0.179020 CAGGTGACTCCTTTGCCACA 60.179 55.000 0.00 0.00 45.67 4.17
1211 1379 2.066700 TTGCCACACCATCTGCCTCA 62.067 55.000 0.00 0.00 0.00 3.86
1261 1450 1.466024 GCGACGACGATGAAGAAGAGT 60.466 52.381 12.29 0.00 42.66 3.24
1326 1515 4.588528 TCCCTTATCTATTTTTGGGCATGC 59.411 41.667 9.90 9.90 34.89 4.06
1423 1612 1.607178 ACATGGGTGCATGGGTGTG 60.607 57.895 0.00 0.00 36.91 3.82
1494 1685 1.118356 ACTCCGATCCATGGCTCTCC 61.118 60.000 13.52 0.00 0.00 3.71
1539 1730 8.691661 TGCCAAATTTTAAGATAGATCTACCC 57.308 34.615 4.10 0.13 35.76 3.69
1551 1744 2.719705 AGATCTACCCACCACCCAAAAA 59.280 45.455 0.00 0.00 0.00 1.94
1644 1837 7.860373 TGCACTAAACTTCATGTCAATTTGTAC 59.140 33.333 0.00 0.00 0.00 2.90
1706 1900 4.566545 TGTCGTTCAATTTGCTCAACAT 57.433 36.364 0.00 0.00 0.00 2.71
1742 1936 3.716872 CCTGGAGTCCAATTACCATAGGT 59.283 47.826 14.17 0.00 34.36 3.08
1861 2055 3.367630 CCATGCCTTGTTTACGAAAATGC 59.632 43.478 0.00 0.00 0.00 3.56
2117 2333 4.224147 TGAAATCCTGGATCCGAAGTTGTA 59.776 41.667 10.14 0.00 0.00 2.41
2375 2632 6.379988 TCAGTCCTTTTATCTATTTTTGGGGC 59.620 38.462 0.00 0.00 0.00 5.80
2380 2637 2.854736 ATCTATTTTTGGGGCAGGCT 57.145 45.000 0.00 0.00 0.00 4.58
2384 2641 0.709992 ATTTTTGGGGCAGGCTAGGA 59.290 50.000 0.00 0.00 0.00 2.94
2399 2656 7.421599 GCAGGCTAGGATTTCTTTTTATCTTC 58.578 38.462 0.00 0.00 0.00 2.87
2408 2665 7.532209 GGATTTCTTTTTATCTTCGATCGATGC 59.468 37.037 20.18 0.00 0.00 3.91
2800 4771 8.723942 TTGTTGTGGTTTTAGTTTGCAATATT 57.276 26.923 0.00 0.00 0.00 1.28
2990 4961 2.915659 AGCCGGGTGTTCGTCTGA 60.916 61.111 4.72 0.00 0.00 3.27
2996 4967 2.740714 GGTGTTCGTCTGATGCGGC 61.741 63.158 0.00 0.00 0.00 6.53
3421 5414 7.221452 GCTTACTCAAAAATGCCATTAGATGTG 59.779 37.037 0.00 0.00 0.00 3.21
4034 6032 8.873186 TTCAATATCCATCATCATAAGCACAT 57.127 30.769 0.00 0.00 0.00 3.21
4106 6107 9.102757 AGTCATGCATGTAAGTTATAAGTCTTG 57.897 33.333 25.43 0.00 0.00 3.02
4280 6283 9.452287 AGTTTTACCAACTTAAGTGAGTGTTTA 57.548 29.630 9.34 0.00 0.00 2.01
4295 6298 1.213182 TGTTTAGTTCCAGCCACACCA 59.787 47.619 0.00 0.00 0.00 4.17
4330 6333 1.152756 GGGTCCCACATGGCATACC 60.153 63.158 1.78 3.45 33.07 2.73
4402 6405 8.602424 TCTCATTTTGATGAACTAACCTTAGGA 58.398 33.333 4.77 0.00 35.08 2.94
4476 6480 6.705825 CGACATGTATGGTTGATCCTTCATTA 59.294 38.462 0.00 0.00 37.07 1.90
4571 6580 8.927721 TCAACGTCATTTGAAGATATTTTACGA 58.072 29.630 0.00 0.00 32.42 3.43
4700 6709 2.147387 AGCGACCCAGAAACCCAGT 61.147 57.895 0.00 0.00 0.00 4.00
4902 6924 1.165907 CGCTTTCAGGGTGAAGCACA 61.166 55.000 8.56 0.00 37.70 4.57
4963 6985 4.681978 GGAAGTGCGCACCCTCGT 62.682 66.667 35.51 15.48 0.00 4.18
5100 7181 8.571336 GCTTGCTTTTGTATATATGGAAGATGT 58.429 33.333 0.00 0.00 0.00 3.06
5145 7226 2.298411 AAGTGGTGCTTGCTTTTGTG 57.702 45.000 0.00 0.00 35.80 3.33
5159 7240 7.629222 GCTTGCTTTTGTGTATATGGAAGATGT 60.629 37.037 0.00 0.00 0.00 3.06
5261 7343 0.463204 TTGGTGTGTGGTTTGGCATG 59.537 50.000 0.00 0.00 0.00 4.06
5331 7413 5.193099 AGTAGCATAAAACCCTGATTGGT 57.807 39.130 0.00 0.00 41.55 3.67
5377 7459 2.203800 TGTGAGCGCTCGTTAATAGG 57.796 50.000 30.75 0.00 0.00 2.57
5428 7510 4.041723 GTGTGTACATGTGGTTTTCAAGC 58.958 43.478 9.11 0.00 0.00 4.01
5608 7694 5.964758 TGTTTTCACAAGTCTTGAGCATTT 58.035 33.333 19.53 0.00 0.00 2.32
5641 7727 3.973305 ACACAATTTTCAATCCCCAACCT 59.027 39.130 0.00 0.00 0.00 3.50
5642 7728 4.202346 ACACAATTTTCAATCCCCAACCTG 60.202 41.667 0.00 0.00 0.00 4.00
5780 7882 1.523154 GCATTGAAGGTGCCCAACGA 61.523 55.000 0.00 0.00 36.61 3.85
5791 7893 1.024579 GCCCAACGACGACCAATCAT 61.025 55.000 0.00 0.00 0.00 2.45
5855 7957 2.042762 CCCCACATCTCTCCCCCA 59.957 66.667 0.00 0.00 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.094182 TCTAGTGGTTCGCTTCATGGTC 60.094 50.000 0.00 0.00 0.00 4.02
3 4 1.899814 TCTAGTGGTTCGCTTCATGGT 59.100 47.619 0.00 0.00 0.00 3.55
4 5 2.271800 GTCTAGTGGTTCGCTTCATGG 58.728 52.381 0.00 0.00 0.00 3.66
5 6 1.920574 CGTCTAGTGGTTCGCTTCATG 59.079 52.381 0.00 0.00 0.00 3.07
7 8 0.242825 CCGTCTAGTGGTTCGCTTCA 59.757 55.000 0.00 0.00 0.00 3.02
8 9 1.077089 GCCGTCTAGTGGTTCGCTTC 61.077 60.000 5.81 0.00 0.00 3.86
9 10 1.080025 GCCGTCTAGTGGTTCGCTT 60.080 57.895 5.81 0.00 0.00 4.68
10 11 2.572284 GCCGTCTAGTGGTTCGCT 59.428 61.111 5.81 0.00 0.00 4.93
11 12 2.508663 GGCCGTCTAGTGGTTCGC 60.509 66.667 0.00 0.00 0.00 4.70
12 13 1.153823 CTGGCCGTCTAGTGGTTCG 60.154 63.158 0.00 0.00 0.00 3.95
13 14 1.218316 CCTGGCCGTCTAGTGGTTC 59.782 63.158 0.00 0.94 0.00 3.62
14 15 1.229082 TCCTGGCCGTCTAGTGGTT 60.229 57.895 0.00 0.00 0.00 3.67
15 16 1.682684 CTCCTGGCCGTCTAGTGGT 60.683 63.158 0.00 0.00 0.00 4.16
16 17 0.757188 ATCTCCTGGCCGTCTAGTGG 60.757 60.000 0.00 0.00 0.00 4.00
17 18 0.671251 GATCTCCTGGCCGTCTAGTG 59.329 60.000 0.00 0.00 0.00 2.74
18 19 0.553819 AGATCTCCTGGCCGTCTAGT 59.446 55.000 0.00 0.00 0.00 2.57
19 20 2.570415 TAGATCTCCTGGCCGTCTAG 57.430 55.000 0.00 0.00 0.00 2.43
20 21 3.223435 CTTTAGATCTCCTGGCCGTCTA 58.777 50.000 0.00 0.00 0.00 2.59
21 22 2.035632 CTTTAGATCTCCTGGCCGTCT 58.964 52.381 0.00 0.00 0.00 4.18
22 23 1.757699 ACTTTAGATCTCCTGGCCGTC 59.242 52.381 0.00 0.00 0.00 4.79
23 24 1.757699 GACTTTAGATCTCCTGGCCGT 59.242 52.381 0.00 0.00 0.00 5.68
24 25 1.757118 TGACTTTAGATCTCCTGGCCG 59.243 52.381 0.00 0.00 0.00 6.13
25 26 2.769095 AGTGACTTTAGATCTCCTGGCC 59.231 50.000 0.00 0.00 0.00 5.36
26 27 3.704061 AGAGTGACTTTAGATCTCCTGGC 59.296 47.826 0.00 0.00 0.00 4.85
27 28 4.441356 GCAGAGTGACTTTAGATCTCCTGG 60.441 50.000 0.00 0.00 0.00 4.45
28 29 4.159321 TGCAGAGTGACTTTAGATCTCCTG 59.841 45.833 0.00 0.00 0.00 3.86
29 30 4.348486 TGCAGAGTGACTTTAGATCTCCT 58.652 43.478 0.00 0.00 0.00 3.69
30 31 4.727507 TGCAGAGTGACTTTAGATCTCC 57.272 45.455 0.00 0.00 0.00 3.71
31 32 4.507388 GCATGCAGAGTGACTTTAGATCTC 59.493 45.833 14.21 0.00 0.00 2.75
32 33 4.440880 GCATGCAGAGTGACTTTAGATCT 58.559 43.478 14.21 0.00 0.00 2.75
33 34 3.559242 GGCATGCAGAGTGACTTTAGATC 59.441 47.826 21.36 0.00 0.00 2.75
34 35 3.054875 TGGCATGCAGAGTGACTTTAGAT 60.055 43.478 21.36 0.00 0.00 1.98
35 36 2.302733 TGGCATGCAGAGTGACTTTAGA 59.697 45.455 21.36 0.00 0.00 2.10
36 37 2.703416 TGGCATGCAGAGTGACTTTAG 58.297 47.619 21.36 0.00 0.00 1.85
37 38 2.813754 GTTGGCATGCAGAGTGACTTTA 59.186 45.455 21.36 0.00 0.00 1.85
38 39 1.610522 GTTGGCATGCAGAGTGACTTT 59.389 47.619 21.36 0.00 0.00 2.66
39 40 1.242076 GTTGGCATGCAGAGTGACTT 58.758 50.000 21.36 0.00 0.00 3.01
40 41 0.952497 CGTTGGCATGCAGAGTGACT 60.952 55.000 21.36 0.00 0.00 3.41
41 42 1.499056 CGTTGGCATGCAGAGTGAC 59.501 57.895 21.36 7.09 0.00 3.67
42 43 1.672030 CCGTTGGCATGCAGAGTGA 60.672 57.895 21.36 0.00 0.00 3.41
43 44 1.915614 GACCGTTGGCATGCAGAGTG 61.916 60.000 21.36 7.11 0.00 3.51
44 45 1.672356 GACCGTTGGCATGCAGAGT 60.672 57.895 21.36 8.88 0.00 3.24
45 46 2.743752 CGACCGTTGGCATGCAGAG 61.744 63.158 21.36 7.35 0.00 3.35
46 47 2.741985 CGACCGTTGGCATGCAGA 60.742 61.111 21.36 3.79 0.00 4.26
47 48 3.803082 CCGACCGTTGGCATGCAG 61.803 66.667 21.36 7.36 0.00 4.41
48 49 4.634703 ACCGACCGTTGGCATGCA 62.635 61.111 21.36 2.54 0.00 3.96
49 50 3.799755 GACCGACCGTTGGCATGC 61.800 66.667 9.90 9.90 0.00 4.06
50 51 1.305219 AATGACCGACCGTTGGCATG 61.305 55.000 4.52 0.00 0.00 4.06
51 52 0.250793 TAATGACCGACCGTTGGCAT 59.749 50.000 4.52 6.78 0.00 4.40
52 53 0.035036 TTAATGACCGACCGTTGGCA 59.965 50.000 4.52 4.73 0.00 4.92
53 54 0.725117 CTTAATGACCGACCGTTGGC 59.275 55.000 4.52 0.00 0.00 4.52
54 55 2.088950 ACTTAATGACCGACCGTTGG 57.911 50.000 2.91 2.91 0.00 3.77
55 56 2.601763 GCTACTTAATGACCGACCGTTG 59.398 50.000 0.00 0.00 0.00 4.10
56 57 2.494870 AGCTACTTAATGACCGACCGTT 59.505 45.455 0.00 0.00 0.00 4.44
57 58 2.097825 AGCTACTTAATGACCGACCGT 58.902 47.619 0.00 0.00 0.00 4.83
58 59 2.865343 AGCTACTTAATGACCGACCG 57.135 50.000 0.00 0.00 0.00 4.79
59 60 6.018180 CCATAAAAGCTACTTAATGACCGACC 60.018 42.308 0.00 0.00 0.00 4.79
60 61 6.537660 ACCATAAAAGCTACTTAATGACCGAC 59.462 38.462 0.00 0.00 0.00 4.79
61 62 6.646267 ACCATAAAAGCTACTTAATGACCGA 58.354 36.000 0.00 0.00 0.00 4.69
62 63 6.537301 TGACCATAAAAGCTACTTAATGACCG 59.463 38.462 0.00 0.00 0.00 4.79
63 64 7.859325 TGACCATAAAAGCTACTTAATGACC 57.141 36.000 0.00 0.00 0.00 4.02
64 65 9.109393 TGATGACCATAAAAGCTACTTAATGAC 57.891 33.333 0.00 0.00 0.00 3.06
65 66 9.851686 ATGATGACCATAAAAGCTACTTAATGA 57.148 29.630 0.00 0.00 32.72 2.57
70 71 8.893727 GTGTTATGATGACCATAAAAGCTACTT 58.106 33.333 0.00 0.00 46.09 2.24
71 72 8.267894 AGTGTTATGATGACCATAAAAGCTACT 58.732 33.333 0.00 0.00 46.09 2.57
72 73 8.438676 AGTGTTATGATGACCATAAAAGCTAC 57.561 34.615 0.00 0.00 46.09 3.58
73 74 9.461312 AAAGTGTTATGATGACCATAAAAGCTA 57.539 29.630 0.00 0.00 46.09 3.32
74 75 7.944729 AAGTGTTATGATGACCATAAAAGCT 57.055 32.000 0.00 0.00 46.09 3.74
82 83 9.489084 GCTATACATAAAGTGTTATGATGACCA 57.511 33.333 12.24 0.00 46.58 4.02
83 84 8.648097 CGCTATACATAAAGTGTTATGATGACC 58.352 37.037 12.24 0.00 46.58 4.02
84 85 9.193133 ACGCTATACATAAAGTGTTATGATGAC 57.807 33.333 12.24 0.00 46.58 3.06
85 86 9.758651 AACGCTATACATAAAGTGTTATGATGA 57.241 29.630 12.24 0.18 46.58 2.92
88 89 9.467258 GGTAACGCTATACATAAAGTGTTATGA 57.533 33.333 12.24 0.00 46.58 2.15
89 90 9.251792 TGGTAACGCTATACATAAAGTGTTATG 57.748 33.333 10.58 3.21 45.61 1.90
90 91 9.472361 CTGGTAACGCTATACATAAAGTGTTAT 57.528 33.333 10.58 0.00 40.48 1.89
91 92 8.469200 ACTGGTAACGCTATACATAAAGTGTTA 58.531 33.333 4.79 4.79 40.48 2.41
92 93 7.325694 ACTGGTAACGCTATACATAAAGTGTT 58.674 34.615 6.52 6.52 40.48 3.32
93 94 6.870769 ACTGGTAACGCTATACATAAAGTGT 58.129 36.000 0.00 0.00 42.35 3.55
94 95 8.749499 GTTACTGGTAACGCTATACATAAAGTG 58.251 37.037 7.70 0.00 36.47 3.16
95 96 8.862550 GTTACTGGTAACGCTATACATAAAGT 57.137 34.615 7.70 0.00 36.47 2.66
109 110 1.159285 GGTTGGGCGTTACTGGTAAC 58.841 55.000 12.13 12.13 41.37 2.50
110 111 1.058284 AGGTTGGGCGTTACTGGTAA 58.942 50.000 0.00 0.00 0.00 2.85
111 112 1.058284 AAGGTTGGGCGTTACTGGTA 58.942 50.000 0.00 0.00 0.00 3.25
112 113 1.058284 TAAGGTTGGGCGTTACTGGT 58.942 50.000 0.00 0.00 0.00 4.00
113 114 2.188062 TTAAGGTTGGGCGTTACTGG 57.812 50.000 0.00 0.00 0.00 4.00
114 115 3.078837 ACATTAAGGTTGGGCGTTACTG 58.921 45.455 0.00 0.00 35.56 2.74
115 116 3.428413 ACATTAAGGTTGGGCGTTACT 57.572 42.857 0.00 0.00 0.00 2.24
116 117 5.121105 AGATACATTAAGGTTGGGCGTTAC 58.879 41.667 0.00 0.00 0.00 2.50
117 118 5.362105 AGATACATTAAGGTTGGGCGTTA 57.638 39.130 0.00 0.00 0.00 3.18
118 119 4.230745 AGATACATTAAGGTTGGGCGTT 57.769 40.909 0.00 0.00 0.00 4.84
119 120 3.926058 AGATACATTAAGGTTGGGCGT 57.074 42.857 0.00 0.00 0.00 5.68
120 121 6.459161 GGTTTAAGATACATTAAGGTTGGGCG 60.459 42.308 0.00 0.00 0.00 6.13
121 122 6.183360 GGGTTTAAGATACATTAAGGTTGGGC 60.183 42.308 0.00 0.00 0.00 5.36
122 123 7.068226 CAGGGTTTAAGATACATTAAGGTTGGG 59.932 40.741 0.00 0.00 0.00 4.12
123 124 7.416326 GCAGGGTTTAAGATACATTAAGGTTGG 60.416 40.741 0.00 0.00 0.00 3.77
124 125 7.122055 TGCAGGGTTTAAGATACATTAAGGTTG 59.878 37.037 0.00 0.00 0.00 3.77
125 126 7.179269 TGCAGGGTTTAAGATACATTAAGGTT 58.821 34.615 0.00 0.00 0.00 3.50
126 127 6.727394 TGCAGGGTTTAAGATACATTAAGGT 58.273 36.000 0.00 0.00 0.00 3.50
127 128 7.823745 ATGCAGGGTTTAAGATACATTAAGG 57.176 36.000 0.00 0.00 0.00 2.69
129 130 9.914834 AGTTATGCAGGGTTTAAGATACATTAA 57.085 29.630 0.00 0.00 0.00 1.40
130 131 9.337396 CAGTTATGCAGGGTTTAAGATACATTA 57.663 33.333 0.00 0.00 0.00 1.90
131 132 8.052748 TCAGTTATGCAGGGTTTAAGATACATT 58.947 33.333 0.00 0.00 0.00 2.71
132 133 7.573710 TCAGTTATGCAGGGTTTAAGATACAT 58.426 34.615 0.00 0.00 0.00 2.29
133 134 6.953101 TCAGTTATGCAGGGTTTAAGATACA 58.047 36.000 0.00 0.00 0.00 2.29
134 135 6.483640 CCTCAGTTATGCAGGGTTTAAGATAC 59.516 42.308 0.00 0.00 0.00 2.24
135 136 6.409234 CCCTCAGTTATGCAGGGTTTAAGATA 60.409 42.308 0.00 0.00 38.29 1.98
136 137 5.440610 CCTCAGTTATGCAGGGTTTAAGAT 58.559 41.667 0.00 0.00 0.00 2.40
137 138 4.324254 CCCTCAGTTATGCAGGGTTTAAGA 60.324 45.833 0.00 0.00 38.29 2.10
138 139 3.947834 CCCTCAGTTATGCAGGGTTTAAG 59.052 47.826 0.00 0.00 38.29 1.85
139 140 3.332485 ACCCTCAGTTATGCAGGGTTTAA 59.668 43.478 4.78 0.00 46.46 1.52
140 141 2.916934 ACCCTCAGTTATGCAGGGTTTA 59.083 45.455 4.78 0.00 46.46 2.01
141 142 1.710809 ACCCTCAGTTATGCAGGGTTT 59.289 47.619 4.78 0.00 46.46 3.27
142 143 1.372501 ACCCTCAGTTATGCAGGGTT 58.627 50.000 4.78 0.00 46.46 4.11
143 144 3.104837 ACCCTCAGTTATGCAGGGT 57.895 52.632 4.78 4.78 45.09 4.34
144 145 0.179073 CGACCCTCAGTTATGCAGGG 60.179 60.000 3.46 3.46 43.83 4.45
145 146 0.179073 CCGACCCTCAGTTATGCAGG 60.179 60.000 0.00 0.00 0.00 4.85
146 147 0.824109 TCCGACCCTCAGTTATGCAG 59.176 55.000 0.00 0.00 0.00 4.41
147 148 0.824109 CTCCGACCCTCAGTTATGCA 59.176 55.000 0.00 0.00 0.00 3.96
148 149 0.105039 CCTCCGACCCTCAGTTATGC 59.895 60.000 0.00 0.00 0.00 3.14
149 150 0.753262 CCCTCCGACCCTCAGTTATG 59.247 60.000 0.00 0.00 0.00 1.90
150 151 0.398664 CCCCTCCGACCCTCAGTTAT 60.399 60.000 0.00 0.00 0.00 1.89
151 152 1.001248 CCCCTCCGACCCTCAGTTA 59.999 63.158 0.00 0.00 0.00 2.24
152 153 2.284699 CCCCTCCGACCCTCAGTT 60.285 66.667 0.00 0.00 0.00 3.16
166 167 4.884023 TATATAGAGTCCGCCAGGCCCC 62.884 59.091 5.63 0.00 37.47 5.80
167 168 0.905337 ATATAGAGTCCGCCAGGCCC 60.905 60.000 5.63 0.00 37.47 5.80
168 169 1.848652 TATATAGAGTCCGCCAGGCC 58.151 55.000 5.63 0.00 37.47 5.19
169 170 2.417515 GCTTATATAGAGTCCGCCAGGC 60.418 54.545 0.00 0.00 37.47 4.85
170 171 2.166664 GGCTTATATAGAGTCCGCCAGG 59.833 54.545 0.00 0.00 36.16 4.45
171 172 2.826128 TGGCTTATATAGAGTCCGCCAG 59.174 50.000 0.00 0.00 40.76 4.85
172 173 2.561419 GTGGCTTATATAGAGTCCGCCA 59.439 50.000 0.00 0.00 43.12 5.69
173 174 2.094130 GGTGGCTTATATAGAGTCCGCC 60.094 54.545 14.42 14.42 35.44 6.13
174 175 2.094130 GGGTGGCTTATATAGAGTCCGC 60.094 54.545 0.00 0.00 0.00 5.54
175 176 2.496470 GGGGTGGCTTATATAGAGTCCG 59.504 54.545 0.00 0.00 0.00 4.79
176 177 2.838813 GGGGGTGGCTTATATAGAGTCC 59.161 54.545 0.00 0.00 0.00 3.85
194 195 0.912486 CCTTTACACTGAGGAGGGGG 59.088 60.000 0.00 0.00 34.91 5.40
195 196 0.912486 CCCTTTACACTGAGGAGGGG 59.088 60.000 0.00 0.00 42.73 4.79
197 198 2.637872 TGAACCCTTTACACTGAGGAGG 59.362 50.000 0.00 0.00 34.91 4.30
198 199 3.071023 TGTGAACCCTTTACACTGAGGAG 59.929 47.826 0.00 0.00 34.91 3.69
199 200 3.042682 TGTGAACCCTTTACACTGAGGA 58.957 45.455 0.00 0.00 34.91 3.71
200 201 3.139077 GTGTGAACCCTTTACACTGAGG 58.861 50.000 0.00 0.00 41.01 3.86
201 202 3.139077 GGTGTGAACCCTTTACACTGAG 58.861 50.000 9.18 0.00 43.11 3.35
202 203 2.158726 GGGTGTGAACCCTTTACACTGA 60.159 50.000 6.68 0.00 46.39 3.41
203 204 2.227194 GGGTGTGAACCCTTTACACTG 58.773 52.381 6.68 0.00 46.39 3.66
204 205 2.651382 GGGTGTGAACCCTTTACACT 57.349 50.000 6.68 0.00 46.39 3.55
213 214 3.202829 TGAGTTACAAGGGTGTGAACC 57.797 47.619 0.00 0.00 38.82 3.62
214 215 4.387862 CGTATGAGTTACAAGGGTGTGAAC 59.612 45.833 0.00 0.00 38.82 3.18
215 216 4.562082 CGTATGAGTTACAAGGGTGTGAA 58.438 43.478 0.00 0.00 38.82 3.18
216 217 3.615592 GCGTATGAGTTACAAGGGTGTGA 60.616 47.826 0.00 0.00 38.82 3.58
217 218 2.671396 GCGTATGAGTTACAAGGGTGTG 59.329 50.000 0.00 0.00 38.82 3.82
218 219 2.300723 TGCGTATGAGTTACAAGGGTGT 59.699 45.455 0.00 0.00 42.09 4.16
219 220 2.967362 TGCGTATGAGTTACAAGGGTG 58.033 47.619 0.00 0.00 0.00 4.61
220 221 3.906720 ATGCGTATGAGTTACAAGGGT 57.093 42.857 0.00 0.00 0.00 4.34
221 222 7.277981 GGATTATATGCGTATGAGTTACAAGGG 59.722 40.741 8.77 0.00 0.00 3.95
222 223 7.817478 TGGATTATATGCGTATGAGTTACAAGG 59.183 37.037 8.77 0.00 0.00 3.61
223 224 8.757164 TGGATTATATGCGTATGAGTTACAAG 57.243 34.615 8.77 0.00 0.00 3.16
224 225 8.364894 ACTGGATTATATGCGTATGAGTTACAA 58.635 33.333 8.77 0.00 0.00 2.41
225 226 7.892609 ACTGGATTATATGCGTATGAGTTACA 58.107 34.615 8.77 0.00 0.00 2.41
226 227 7.218393 CGACTGGATTATATGCGTATGAGTTAC 59.782 40.741 8.77 0.00 0.00 2.50
227 228 7.120138 TCGACTGGATTATATGCGTATGAGTTA 59.880 37.037 8.77 0.00 0.00 2.24
228 229 6.072119 TCGACTGGATTATATGCGTATGAGTT 60.072 38.462 8.77 0.00 0.00 3.01
229 230 5.414765 TCGACTGGATTATATGCGTATGAGT 59.585 40.000 8.77 3.09 0.00 3.41
230 231 5.739630 GTCGACTGGATTATATGCGTATGAG 59.260 44.000 8.70 0.19 0.00 2.90
231 232 5.392703 GGTCGACTGGATTATATGCGTATGA 60.393 44.000 16.46 0.34 0.00 2.15
232 233 4.798907 GGTCGACTGGATTATATGCGTATG 59.201 45.833 16.46 0.00 0.00 2.39
233 234 4.438336 CGGTCGACTGGATTATATGCGTAT 60.438 45.833 16.99 3.47 0.00 3.06
234 235 3.120095 CGGTCGACTGGATTATATGCGTA 60.120 47.826 16.99 0.00 0.00 4.42
235 236 2.351447 CGGTCGACTGGATTATATGCGT 60.351 50.000 16.99 0.00 0.00 5.24
236 237 2.251040 CGGTCGACTGGATTATATGCG 58.749 52.381 16.99 2.27 0.00 4.73
237 238 1.993370 GCGGTCGACTGGATTATATGC 59.007 52.381 25.20 1.92 0.00 3.14
238 239 2.231478 AGGCGGTCGACTGGATTATATG 59.769 50.000 25.20 0.09 28.47 1.78
239 240 2.526432 AGGCGGTCGACTGGATTATAT 58.474 47.619 25.20 0.00 28.47 0.86
240 241 1.991121 AGGCGGTCGACTGGATTATA 58.009 50.000 25.20 0.00 28.47 0.98
241 242 1.612463 GTAGGCGGTCGACTGGATTAT 59.388 52.381 25.20 3.78 34.01 1.28
242 243 1.027357 GTAGGCGGTCGACTGGATTA 58.973 55.000 25.20 5.08 34.01 1.75
243 244 1.814527 GTAGGCGGTCGACTGGATT 59.185 57.895 25.20 6.01 34.01 3.01
244 245 2.478890 CGTAGGCGGTCGACTGGAT 61.479 63.158 25.20 7.70 34.01 3.41
245 246 3.129502 CGTAGGCGGTCGACTGGA 61.130 66.667 25.20 0.00 34.01 3.86
262 263 3.217743 CCCTACGTCTCGGAGCCC 61.218 72.222 0.00 0.00 36.34 5.19
263 264 3.902086 GCCCTACGTCTCGGAGCC 61.902 72.222 0.00 0.00 36.34 4.70
264 265 2.829458 AGCCCTACGTCTCGGAGC 60.829 66.667 0.00 0.00 36.34 4.70
265 266 1.313812 AACAGCCCTACGTCTCGGAG 61.314 60.000 0.00 0.00 37.59 4.63
266 267 0.035152 TAACAGCCCTACGTCTCGGA 60.035 55.000 0.00 0.00 0.00 4.55
267 268 0.100146 GTAACAGCCCTACGTCTCGG 59.900 60.000 0.00 0.00 0.00 4.63
268 269 1.093159 AGTAACAGCCCTACGTCTCG 58.907 55.000 0.00 0.00 0.00 4.04
269 270 2.159268 GGAAGTAACAGCCCTACGTCTC 60.159 54.545 0.00 0.00 31.08 3.36
270 271 1.823610 GGAAGTAACAGCCCTACGTCT 59.176 52.381 0.00 0.00 31.08 4.18
271 272 1.468736 CGGAAGTAACAGCCCTACGTC 60.469 57.143 0.00 0.00 0.00 4.34
272 273 0.529378 CGGAAGTAACAGCCCTACGT 59.471 55.000 0.00 0.00 0.00 3.57
273 274 0.529378 ACGGAAGTAACAGCCCTACG 59.471 55.000 0.00 0.00 46.88 3.51
286 287 0.737715 CAAGCCCTTCTCGACGGAAG 60.738 60.000 15.16 15.16 41.49 3.46
287 288 1.183030 TCAAGCCCTTCTCGACGGAA 61.183 55.000 0.00 0.00 0.00 4.30
288 289 1.183030 TTCAAGCCCTTCTCGACGGA 61.183 55.000 0.00 0.00 0.00 4.69
289 290 1.014564 GTTCAAGCCCTTCTCGACGG 61.015 60.000 0.00 0.00 0.00 4.79
290 291 0.038159 AGTTCAAGCCCTTCTCGACG 60.038 55.000 0.00 0.00 0.00 5.12
291 292 1.715993 GAGTTCAAGCCCTTCTCGAC 58.284 55.000 0.00 0.00 0.00 4.20
292 293 0.243907 CGAGTTCAAGCCCTTCTCGA 59.756 55.000 10.37 0.00 46.92 4.04
293 294 2.743195 CGAGTTCAAGCCCTTCTCG 58.257 57.895 0.00 0.00 41.02 4.04
294 295 3.314541 TTACGAGTTCAAGCCCTTCTC 57.685 47.619 0.00 0.00 0.00 2.87
295 296 3.764237 TTTACGAGTTCAAGCCCTTCT 57.236 42.857 0.00 0.00 0.00 2.85
296 297 4.254492 AGATTTACGAGTTCAAGCCCTTC 58.746 43.478 0.00 0.00 0.00 3.46
297 298 4.020128 AGAGATTTACGAGTTCAAGCCCTT 60.020 41.667 0.00 0.00 0.00 3.95
298 299 3.515901 AGAGATTTACGAGTTCAAGCCCT 59.484 43.478 0.00 0.00 0.00 5.19
299 300 3.863041 AGAGATTTACGAGTTCAAGCCC 58.137 45.455 0.00 0.00 0.00 5.19
300 301 4.436183 GCAAGAGATTTACGAGTTCAAGCC 60.436 45.833 0.00 0.00 0.00 4.35
301 302 4.642953 GCAAGAGATTTACGAGTTCAAGC 58.357 43.478 0.00 0.00 0.00 4.01
302 303 4.386049 ACGCAAGAGATTTACGAGTTCAAG 59.614 41.667 0.00 0.00 43.62 3.02
303 304 4.304110 ACGCAAGAGATTTACGAGTTCAA 58.696 39.130 0.00 0.00 43.62 2.69
304 305 3.909430 ACGCAAGAGATTTACGAGTTCA 58.091 40.909 0.00 0.00 43.62 3.18
305 306 6.690098 TGTATACGCAAGAGATTTACGAGTTC 59.310 38.462 0.00 0.00 43.62 3.01
306 307 6.558009 TGTATACGCAAGAGATTTACGAGTT 58.442 36.000 0.00 0.00 43.62 3.01
307 308 6.127810 TGTATACGCAAGAGATTTACGAGT 57.872 37.500 0.00 0.00 43.62 4.18
308 309 6.691818 AGTTGTATACGCAAGAGATTTACGAG 59.308 38.462 0.00 0.00 43.62 4.18
309 310 6.558009 AGTTGTATACGCAAGAGATTTACGA 58.442 36.000 0.00 0.00 43.62 3.43
310 311 6.807708 AGTTGTATACGCAAGAGATTTACG 57.192 37.500 0.00 0.00 43.62 3.18
311 312 8.853469 AGTAGTTGTATACGCAAGAGATTTAC 57.147 34.615 0.00 0.00 43.62 2.01
312 313 8.133627 GGAGTAGTTGTATACGCAAGAGATTTA 58.866 37.037 0.00 0.00 43.62 1.40
313 314 6.979238 GGAGTAGTTGTATACGCAAGAGATTT 59.021 38.462 0.00 0.00 43.62 2.17
314 315 6.096423 TGGAGTAGTTGTATACGCAAGAGATT 59.904 38.462 0.00 0.00 43.62 2.40
315 316 5.593095 TGGAGTAGTTGTATACGCAAGAGAT 59.407 40.000 0.00 0.00 43.62 2.75
316 317 4.945543 TGGAGTAGTTGTATACGCAAGAGA 59.054 41.667 0.00 0.00 43.62 3.10
317 318 5.244785 TGGAGTAGTTGTATACGCAAGAG 57.755 43.478 0.00 0.00 43.62 2.85
318 319 5.847111 ATGGAGTAGTTGTATACGCAAGA 57.153 39.130 0.00 0.00 43.62 3.02
319 320 5.629849 GCTATGGAGTAGTTGTATACGCAAG 59.370 44.000 0.00 0.00 36.59 4.01
320 321 5.301045 AGCTATGGAGTAGTTGTATACGCAA 59.699 40.000 0.00 0.00 32.72 4.85
321 322 4.825634 AGCTATGGAGTAGTTGTATACGCA 59.174 41.667 0.00 0.00 32.72 5.24
322 323 5.373981 AGCTATGGAGTAGTTGTATACGC 57.626 43.478 0.00 0.00 32.72 4.42
323 324 6.877855 TCCTAGCTATGGAGTAGTTGTATACG 59.122 42.308 7.59 0.00 32.72 3.06
324 325 8.810990 ATCCTAGCTATGGAGTAGTTGTATAC 57.189 38.462 14.62 0.00 36.99 1.47
325 326 8.837737 AGATCCTAGCTATGGAGTAGTTGTATA 58.162 37.037 14.62 0.00 36.99 1.47
326 327 7.704727 AGATCCTAGCTATGGAGTAGTTGTAT 58.295 38.462 14.62 0.00 36.99 2.29
327 328 7.092748 AGATCCTAGCTATGGAGTAGTTGTA 57.907 40.000 14.62 0.00 36.99 2.41
328 329 5.959512 AGATCCTAGCTATGGAGTAGTTGT 58.040 41.667 14.62 0.59 36.99 3.32
329 330 6.686630 CAAGATCCTAGCTATGGAGTAGTTG 58.313 44.000 14.62 11.42 36.99 3.16
330 331 5.245075 GCAAGATCCTAGCTATGGAGTAGTT 59.755 44.000 14.62 1.70 36.99 2.24
331 332 4.770010 GCAAGATCCTAGCTATGGAGTAGT 59.230 45.833 14.62 1.99 36.99 2.73
332 333 4.159506 GGCAAGATCCTAGCTATGGAGTAG 59.840 50.000 14.62 7.96 36.99 2.57
333 334 4.090090 GGCAAGATCCTAGCTATGGAGTA 58.910 47.826 14.62 0.00 36.99 2.59
334 335 2.903135 GGCAAGATCCTAGCTATGGAGT 59.097 50.000 14.62 5.18 36.99 3.85
335 336 3.172339 AGGCAAGATCCTAGCTATGGAG 58.828 50.000 14.62 5.47 36.99 3.86
336 337 3.169099 GAGGCAAGATCCTAGCTATGGA 58.831 50.000 12.51 12.51 36.38 3.41
337 338 3.172339 AGAGGCAAGATCCTAGCTATGG 58.828 50.000 0.00 0.00 36.38 2.74
338 339 3.195396 GGAGAGGCAAGATCCTAGCTATG 59.805 52.174 0.00 0.00 36.38 2.23
339 340 3.181413 TGGAGAGGCAAGATCCTAGCTAT 60.181 47.826 0.00 0.00 36.38 2.97
340 341 2.177888 TGGAGAGGCAAGATCCTAGCTA 59.822 50.000 0.00 0.00 36.38 3.32
341 342 1.062581 TGGAGAGGCAAGATCCTAGCT 60.063 52.381 0.00 0.00 36.38 3.32
342 343 1.418334 TGGAGAGGCAAGATCCTAGC 58.582 55.000 0.00 0.00 36.38 3.42
343 344 4.837860 ACTAATGGAGAGGCAAGATCCTAG 59.162 45.833 0.00 0.00 36.38 3.02
344 345 4.820775 ACTAATGGAGAGGCAAGATCCTA 58.179 43.478 0.00 0.00 36.38 2.94
345 346 3.663198 ACTAATGGAGAGGCAAGATCCT 58.337 45.455 0.00 0.00 39.67 3.24
346 347 4.262678 GGTACTAATGGAGAGGCAAGATCC 60.263 50.000 0.00 0.00 0.00 3.36
347 348 4.262678 GGGTACTAATGGAGAGGCAAGATC 60.263 50.000 0.00 0.00 0.00 2.75
348 349 3.648545 GGGTACTAATGGAGAGGCAAGAT 59.351 47.826 0.00 0.00 0.00 2.40
349 350 3.039011 GGGTACTAATGGAGAGGCAAGA 58.961 50.000 0.00 0.00 0.00 3.02
350 351 2.104963 GGGGTACTAATGGAGAGGCAAG 59.895 54.545 0.00 0.00 0.00 4.01
351 352 2.124411 GGGGTACTAATGGAGAGGCAA 58.876 52.381 0.00 0.00 0.00 4.52
352 353 1.694693 GGGGGTACTAATGGAGAGGCA 60.695 57.143 0.00 0.00 0.00 4.75
353 354 1.057471 GGGGGTACTAATGGAGAGGC 58.943 60.000 0.00 0.00 0.00 4.70
369 370 4.456662 AGTCTGATAGTAGTGTAGGGGG 57.543 50.000 0.00 0.00 0.00 5.40
370 371 6.839454 TCTAAGTCTGATAGTAGTGTAGGGG 58.161 44.000 0.00 0.00 0.00 4.79
371 372 7.229106 GGTTCTAAGTCTGATAGTAGTGTAGGG 59.771 44.444 0.00 0.00 0.00 3.53
372 373 7.774157 TGGTTCTAAGTCTGATAGTAGTGTAGG 59.226 40.741 0.00 0.00 0.00 3.18
373 374 8.734218 TGGTTCTAAGTCTGATAGTAGTGTAG 57.266 38.462 0.00 0.00 0.00 2.74
374 375 9.121658 CATGGTTCTAAGTCTGATAGTAGTGTA 57.878 37.037 0.00 0.00 0.00 2.90
375 376 7.834681 TCATGGTTCTAAGTCTGATAGTAGTGT 59.165 37.037 0.00 0.00 0.00 3.55
376 377 8.132362 GTCATGGTTCTAAGTCTGATAGTAGTG 58.868 40.741 0.00 0.00 0.00 2.74
377 378 7.834681 TGTCATGGTTCTAAGTCTGATAGTAGT 59.165 37.037 0.00 0.00 0.00 2.73
378 379 8.226819 TGTCATGGTTCTAAGTCTGATAGTAG 57.773 38.462 0.00 0.00 0.00 2.57
379 380 7.285629 CCTGTCATGGTTCTAAGTCTGATAGTA 59.714 40.741 0.00 0.00 0.00 1.82
380 381 6.097554 CCTGTCATGGTTCTAAGTCTGATAGT 59.902 42.308 0.00 0.00 0.00 2.12
381 382 6.511416 CCTGTCATGGTTCTAAGTCTGATAG 58.489 44.000 0.00 0.00 0.00 2.08
382 383 5.163405 GCCTGTCATGGTTCTAAGTCTGATA 60.163 44.000 0.00 0.00 0.00 2.15
383 384 4.383552 GCCTGTCATGGTTCTAAGTCTGAT 60.384 45.833 0.00 0.00 0.00 2.90
384 385 3.055819 GCCTGTCATGGTTCTAAGTCTGA 60.056 47.826 0.00 0.00 0.00 3.27
385 386 3.265791 GCCTGTCATGGTTCTAAGTCTG 58.734 50.000 0.00 0.00 0.00 3.51
386 387 2.906389 TGCCTGTCATGGTTCTAAGTCT 59.094 45.455 0.00 0.00 0.00 3.24
387 388 3.334583 TGCCTGTCATGGTTCTAAGTC 57.665 47.619 0.00 0.00 0.00 3.01
388 389 3.679917 CGATGCCTGTCATGGTTCTAAGT 60.680 47.826 0.00 0.00 35.05 2.24
389 390 2.868583 CGATGCCTGTCATGGTTCTAAG 59.131 50.000 0.00 0.00 35.05 2.18
390 391 2.905075 CGATGCCTGTCATGGTTCTAA 58.095 47.619 0.00 0.00 35.05 2.10
391 392 1.473257 GCGATGCCTGTCATGGTTCTA 60.473 52.381 0.00 0.00 35.05 2.10
392 393 0.745845 GCGATGCCTGTCATGGTTCT 60.746 55.000 0.00 0.00 35.05 3.01
393 394 1.026182 TGCGATGCCTGTCATGGTTC 61.026 55.000 0.00 0.00 35.05 3.62
394 395 0.394762 ATGCGATGCCTGTCATGGTT 60.395 50.000 0.00 0.00 35.05 3.67
395 396 1.099295 CATGCGATGCCTGTCATGGT 61.099 55.000 0.00 0.00 35.05 3.55
396 397 1.652563 CATGCGATGCCTGTCATGG 59.347 57.895 0.00 0.00 35.05 3.66
397 398 0.816421 TCCATGCGATGCCTGTCATG 60.816 55.000 0.00 0.00 35.05 3.07
398 399 0.109913 ATCCATGCGATGCCTGTCAT 59.890 50.000 0.00 0.00 38.32 3.06
399 400 0.533531 GATCCATGCGATGCCTGTCA 60.534 55.000 1.91 0.00 0.00 3.58
400 401 0.533531 TGATCCATGCGATGCCTGTC 60.534 55.000 1.91 0.00 0.00 3.51
401 402 0.107066 TTGATCCATGCGATGCCTGT 60.107 50.000 1.91 0.00 0.00 4.00
402 403 0.309922 GTTGATCCATGCGATGCCTG 59.690 55.000 1.91 0.00 0.00 4.85
403 404 0.107066 TGTTGATCCATGCGATGCCT 60.107 50.000 1.91 0.00 0.00 4.75
404 405 0.956633 ATGTTGATCCATGCGATGCC 59.043 50.000 1.91 0.00 0.00 4.40
405 406 2.606308 GGAATGTTGATCCATGCGATGC 60.606 50.000 1.91 0.00 36.92 3.91
461 462 2.031919 AGCAACCGCACGGATTCA 59.968 55.556 17.40 0.00 42.27 2.57
469 470 1.092921 AAACTTCGTCAGCAACCGCA 61.093 50.000 0.00 0.00 42.27 5.69
619 620 3.589951 ATGCAACTGCTCCCTCATTAT 57.410 42.857 2.95 0.00 42.66 1.28
742 760 2.214347 CATTGTTCACACCACCACGTA 58.786 47.619 0.00 0.00 0.00 3.57
784 802 2.430694 GGGCAGTCAAAAGGAGTTGTTT 59.569 45.455 0.00 0.00 0.00 2.83
880 913 2.588464 TGGAGAAGAGGACGAGAAGT 57.412 50.000 0.00 0.00 0.00 3.01
885 918 1.272480 TGTGGATGGAGAAGAGGACGA 60.272 52.381 0.00 0.00 0.00 4.20
1040 1117 2.393768 CGCTTGGATGCTTCGTGCT 61.394 57.895 5.00 0.00 43.37 4.40
1084 1161 3.217743 CTCGTCGGTAGGGAGGGC 61.218 72.222 0.00 0.00 0.00 5.19
1192 1348 1.303561 GAGGCAGATGGTGTGGCAA 60.304 57.895 3.64 0.00 42.81 4.52
1199 1355 1.276859 TGGCAGATGAGGCAGATGGT 61.277 55.000 0.00 0.00 39.34 3.55
1284 1473 3.326880 GGGACTGAACAAGGAAACCTAGA 59.673 47.826 0.00 0.00 31.13 2.43
1326 1515 8.743714 AGATGGAATAAAAGCAAAAACTCTAGG 58.256 33.333 0.00 0.00 0.00 3.02
1423 1612 3.090532 AATGAGGAGCCGACCCCC 61.091 66.667 0.00 0.00 0.00 5.40
1494 1685 3.369756 GCATCAACACATTTTGGATGCAG 59.630 43.478 17.22 0.00 38.50 4.41
1552 1745 9.927668 CCATATATAAGAAATTTCGGGCAAAAT 57.072 29.630 12.42 4.60 0.00 1.82
1644 1837 2.086054 AGCGTGAGAGGCTAGTTTTG 57.914 50.000 0.00 0.00 37.59 2.44
1706 1900 4.949856 GGACTCCAGGAATCAAGCAATTTA 59.050 41.667 0.00 0.00 0.00 1.40
2282 2536 5.870433 TGACTAACGTCTTCTTTGTTGACAA 59.130 36.000 0.00 0.00 40.86 3.18
2344 2601 8.794335 AAAATAGATAAAAGGACTGACCAGAC 57.206 34.615 3.76 0.00 42.04 3.51
2375 2632 7.495934 TCGAAGATAAAAAGAAATCCTAGCCTG 59.504 37.037 0.00 0.00 0.00 4.85
2380 2637 9.982651 ATCGATCGAAGATAAAAAGAAATCCTA 57.017 29.630 23.50 0.00 45.12 2.94
2384 2641 7.852945 GTGCATCGATCGAAGATAAAAAGAAAT 59.147 33.333 23.50 0.00 45.12 2.17
2399 2656 3.221964 TGATATGGAGTGCATCGATCG 57.778 47.619 9.36 9.36 0.00 3.69
2688 4659 7.275560 CGTAATGACAGTACTGACATGAATGAA 59.724 37.037 31.85 15.96 43.11 2.57
2996 4967 4.748144 GGGCAGGGGAGGCAACAG 62.748 72.222 0.00 0.00 41.41 3.16
3014 4985 3.788766 GGCGACGACCACATGTGC 61.789 66.667 20.81 6.93 0.00 4.57
3483 5476 7.825331 TTGGATGGTCAACAAGTTTTACATA 57.175 32.000 0.00 0.00 0.00 2.29
4106 6107 9.840427 AACATACAGATGTACTAATGCAAAAAC 57.160 29.630 0.00 0.00 45.93 2.43
4131 6134 3.070476 TGATGTAACATGGCAGAGCAA 57.930 42.857 0.00 0.00 0.00 3.91
4175 6178 5.691754 CCTTTAGTGCACCAAAATTCACTTC 59.308 40.000 14.63 0.00 40.01 3.01
4188 6191 1.000274 CCAAACAGCCCTTTAGTGCAC 60.000 52.381 9.40 9.40 0.00 4.57
4252 6255 8.344446 ACACTCACTTAAGTTGGTAAAACTTT 57.656 30.769 5.07 0.00 40.58 2.66
4259 6262 7.712205 GGAACTAAACACTCACTTAAGTTGGTA 59.288 37.037 5.07 0.00 0.00 3.25
4280 6283 0.620556 CCTATGGTGTGGCTGGAACT 59.379 55.000 0.00 0.00 0.00 3.01
4402 6405 3.807553 CCACACATTTTTCCCAAGCTTT 58.192 40.909 0.00 0.00 0.00 3.51
4439 6442 5.069119 ACCATACATGTCGAAGAGAGCATAA 59.931 40.000 0.00 0.00 36.95 1.90
4598 6607 5.439721 TGATAATTCAGCAGGCACATAGTT 58.560 37.500 0.00 0.00 0.00 2.24
4700 6709 1.836166 CTTCTGCCTCCTGAAGATCCA 59.164 52.381 4.86 0.00 44.92 3.41
4826 6848 2.170397 TGCATGGTTGATGGTACTCGAT 59.830 45.455 0.00 0.00 31.99 3.59
4827 6849 1.552792 TGCATGGTTGATGGTACTCGA 59.447 47.619 0.00 0.00 31.99 4.04
4828 6850 1.935873 CTGCATGGTTGATGGTACTCG 59.064 52.381 0.00 0.00 31.99 4.18
4829 6851 2.939103 GACTGCATGGTTGATGGTACTC 59.061 50.000 0.00 0.00 31.99 2.59
4904 6926 5.066968 TCATCAAGTAGTCAACATACGCA 57.933 39.130 0.00 0.00 0.00 5.24
4912 6934 5.489792 AAGAAGCCTCATCAAGTAGTCAA 57.510 39.130 0.00 0.00 0.00 3.18
4963 6985 5.046304 ACCAAAAGAGCATCAGTTCTAGCTA 60.046 40.000 0.00 0.00 37.48 3.32
5100 7181 2.831685 ACTGGTGCACATAGTTCGAA 57.168 45.000 20.43 0.00 0.00 3.71
5106 7187 6.266323 CACTTAGTAGTACTGGTGCACATAG 58.734 44.000 20.43 17.94 30.98 2.23
5145 7226 8.916654 CACATAGTTCGAACATCTTCCATATAC 58.083 37.037 28.78 0.00 0.00 1.47
5159 7240 2.831685 ACTGGTGCACATAGTTCGAA 57.168 45.000 20.43 0.00 0.00 3.71
5261 7343 2.544267 AGCACGAGTTTAACAAGCAGAC 59.456 45.455 0.00 0.00 0.00 3.51
5331 7413 8.040716 GCTTAACTAGCTTCAAATGAACCTAA 57.959 34.615 0.00 0.00 46.77 2.69
5377 7459 8.887036 TCATGTATACCATAACACATCAGAAC 57.113 34.615 0.00 0.00 30.71 3.01
5428 7510 4.217118 CCTTTTTGAGTCACCATCTTCCTG 59.783 45.833 0.00 0.00 0.00 3.86
5608 7694 8.091449 GGATTGAAAATTGTGTACATAAACCCA 58.909 33.333 9.23 3.20 0.00 4.51
5744 7834 1.444836 TGCAACGGCGCTTATTTAGT 58.555 45.000 6.90 0.00 45.35 2.24
5855 7957 2.351706 TGGTTTTTGAGCGTACCCTT 57.648 45.000 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.