Multiple sequence alignment - TraesCS7B01G147500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G147500 chr7B 100.000 6845 0 0 1 6845 193536259 193529415 0.000000e+00 12641.0
1 TraesCS7B01G147500 chr7B 100.000 59 0 0 2324 2382 614405257 614405315 7.260000e-20 110.0
2 TraesCS7B01G147500 chr7D 96.089 3580 120 7 2383 5955 207547341 207550907 0.000000e+00 5818.0
3 TraesCS7B01G147500 chr7D 93.849 1512 62 10 437 1943 207545528 207547013 0.000000e+00 2248.0
4 TraesCS7B01G147500 chr7D 95.349 344 16 0 1979 2322 207547013 207547356 1.300000e-151 547.0
5 TraesCS7B01G147500 chr7D 90.432 324 16 3 5973 6290 207550895 207551209 4.940000e-111 412.0
6 TraesCS7B01G147500 chr7D 96.047 253 8 2 6573 6824 207559088 207559339 1.780000e-110 411.0
7 TraesCS7B01G147500 chr7A 88.392 1387 119 20 3165 4525 220096708 220098078 0.000000e+00 1631.0
8 TraesCS7B01G147500 chr7A 89.320 824 83 5 4580 5400 220098426 220099247 0.000000e+00 1029.0
9 TraesCS7B01G147500 chr7A 90.987 699 48 6 2383 3067 220096044 220096741 0.000000e+00 928.0
10 TraesCS7B01G147500 chr7A 85.327 443 48 8 5513 5947 220099371 220099804 6.300000e-120 442.0
11 TraesCS7B01G147500 chr7A 90.087 343 28 2 1981 2322 220095722 220096059 2.270000e-119 440.0
12 TraesCS7B01G147500 chr7A 81.901 547 57 18 374 915 220093585 220094094 2.280000e-114 424.0
13 TraesCS7B01G147500 chr7A 85.714 350 34 8 5975 6323 220099798 220100132 8.440000e-94 355.0
14 TraesCS7B01G147500 chr7A 92.149 242 18 1 6578 6819 220100610 220100850 2.360000e-89 340.0
15 TraesCS7B01G147500 chr7A 81.364 220 15 8 953 1149 220094083 220094299 9.190000e-34 156.0
16 TraesCS7B01G147500 chr7A 100.000 61 0 0 2322 2382 92441182 92441242 5.610000e-21 113.0
17 TraesCS7B01G147500 chr6A 98.165 109 2 0 3069 3177 511618213 511618105 2.520000e-44 191.0
18 TraesCS7B01G147500 chr3A 98.165 109 2 0 3069 3177 379168564 379168672 2.520000e-44 191.0
19 TraesCS7B01G147500 chr3A 94.118 119 7 0 3069 3187 264038318 264038436 1.520000e-41 182.0
20 TraesCS7B01G147500 chr3A 95.522 67 3 0 2316 2382 120587 120521 2.610000e-19 108.0
21 TraesCS7B01G147500 chr1A 95.726 117 4 1 3071 3187 497521736 497521851 3.260000e-43 187.0
22 TraesCS7B01G147500 chr6D 97.248 109 3 0 3069 3177 94662790 94662682 1.170000e-42 185.0
23 TraesCS7B01G147500 chr6D 97.248 109 3 0 3069 3177 126434320 126434212 1.170000e-42 185.0
24 TraesCS7B01G147500 chr2A 96.330 109 4 0 3069 3177 377827816 377827924 5.450000e-41 180.0
25 TraesCS7B01G147500 chr5B 92.063 126 8 2 3069 3192 384589774 384589649 7.060000e-40 176.0
26 TraesCS7B01G147500 chr5B 100.000 59 0 0 2324 2382 513980381 513980323 7.260000e-20 110.0
27 TraesCS7B01G147500 chr5B 88.889 81 6 3 2304 2382 532626103 532626182 5.650000e-16 97.1
28 TraesCS7B01G147500 chr2B 100.000 60 0 0 2323 2382 137449114 137449055 2.020000e-20 111.0
29 TraesCS7B01G147500 chr1B 100.000 59 0 0 2324 2382 453802445 453802503 7.260000e-20 110.0
30 TraesCS7B01G147500 chr1B 98.387 62 0 1 2321 2382 576050448 576050508 2.610000e-19 108.0
31 TraesCS7B01G147500 chr1B 94.203 69 1 2 2323 2390 429981906 429981840 1.210000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G147500 chr7B 193529415 193536259 6844 True 12641.000000 12641 100.00000 1 6845 1 chr7B.!!$R1 6844
1 TraesCS7B01G147500 chr7D 207545528 207551209 5681 False 2256.250000 5818 93.92975 437 6290 4 chr7D.!!$F2 5853
2 TraesCS7B01G147500 chr7A 220093585 220100850 7265 False 638.333333 1631 87.24900 374 6819 9 chr7A.!!$F2 6445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
200 201 0.032813 AGCATGGGGGAAGATTGTGG 60.033 55.000 0.00 0.0 0.00 4.17 F
293 294 0.032952 CGGGACCCACCATATACACG 59.967 60.000 12.15 0.0 41.20 4.49 F
1228 1258 0.379316 GTGTTCGTGTGTTTGGTCCC 59.621 55.000 0.00 0.0 0.00 4.46 F
1964 2123 0.753867 TGCTAGTGAACGTGGACCAA 59.246 50.000 0.00 0.0 0.00 3.67 F
2267 3028 0.962356 CCAATGTCAAGCCGCCTTCT 60.962 55.000 0.00 0.0 0.00 2.85 F
3550 4361 0.975040 AGACCTTCAGCCGATGAGCT 60.975 55.000 0.00 0.0 46.45 4.09 F
3944 4757 1.202521 TGCTGACGTGATTGACTGTGT 60.203 47.619 0.00 0.0 0.00 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1979 2138 1.003118 AGGAAAGGCATGCGAGTAACA 59.997 47.619 12.44 0.00 0.00 2.41 R
1986 2746 3.506108 CCAGAGGAAAGGCATGCG 58.494 61.111 12.44 0.00 0.00 4.73 R
2722 3486 0.179100 CGTCACTGGCCAGATGTAGG 60.179 60.000 39.19 20.13 0.00 3.18 R
3242 4024 1.717194 AAAAGATGCAATTGCGCAGG 58.283 45.000 24.58 5.75 46.99 4.85 R
4057 4870 1.269703 ATCCCTGGTGTACCCCGAAC 61.270 60.000 0.00 0.00 34.29 3.95 R
5053 6184 0.322816 GAAGCAGACCCAATGCCTGA 60.323 55.000 0.00 0.00 44.97 3.86 R
5935 7118 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.180377 ACTCCATATGAGGTACGGAAGA 57.820 45.455 3.65 0.00 46.01 2.87
22 23 4.543689 ACTCCATATGAGGTACGGAAGAA 58.456 43.478 3.65 0.00 46.01 2.52
23 24 4.960469 ACTCCATATGAGGTACGGAAGAAA 59.040 41.667 3.65 0.00 46.01 2.52
24 25 5.069251 ACTCCATATGAGGTACGGAAGAAAG 59.931 44.000 3.65 0.00 46.01 2.62
25 26 4.344102 TCCATATGAGGTACGGAAGAAAGG 59.656 45.833 3.65 0.00 0.00 3.11
26 27 4.503296 CCATATGAGGTACGGAAGAAAGGG 60.503 50.000 3.65 0.00 0.00 3.95
27 28 0.611714 TGAGGTACGGAAGAAAGGGC 59.388 55.000 0.00 0.00 0.00 5.19
28 29 0.107800 GAGGTACGGAAGAAAGGGCC 60.108 60.000 0.00 0.00 0.00 5.80
29 30 0.838987 AGGTACGGAAGAAAGGGCCA 60.839 55.000 6.18 0.00 0.00 5.36
30 31 0.255033 GGTACGGAAGAAAGGGCCAT 59.745 55.000 6.18 0.00 0.00 4.40
31 32 1.487558 GGTACGGAAGAAAGGGCCATA 59.512 52.381 6.18 0.00 0.00 2.74
32 33 2.105993 GGTACGGAAGAAAGGGCCATAT 59.894 50.000 6.18 0.00 0.00 1.78
33 34 2.348411 ACGGAAGAAAGGGCCATATG 57.652 50.000 6.18 0.00 0.00 1.78
34 35 1.843851 ACGGAAGAAAGGGCCATATGA 59.156 47.619 6.18 0.00 0.00 2.15
35 36 2.158755 ACGGAAGAAAGGGCCATATGAG 60.159 50.000 6.18 0.00 0.00 2.90
36 37 2.811873 CGGAAGAAAGGGCCATATGAGG 60.812 54.545 6.18 0.00 0.00 3.86
37 38 2.175715 GGAAGAAAGGGCCATATGAGGT 59.824 50.000 6.18 0.00 0.00 3.85
38 39 3.394606 GGAAGAAAGGGCCATATGAGGTA 59.605 47.826 6.18 0.00 0.00 3.08
39 40 4.390264 GAAGAAAGGGCCATATGAGGTAC 58.610 47.826 6.18 0.00 0.00 3.34
40 41 2.368875 AGAAAGGGCCATATGAGGTACG 59.631 50.000 6.18 0.00 0.00 3.67
41 42 1.056660 AAGGGCCATATGAGGTACGG 58.943 55.000 6.18 0.00 0.00 4.02
42 43 0.105142 AGGGCCATATGAGGTACGGT 60.105 55.000 6.18 0.00 0.00 4.83
43 44 0.763035 GGGCCATATGAGGTACGGTT 59.237 55.000 4.39 0.00 0.00 4.44
44 45 1.270678 GGGCCATATGAGGTACGGTTC 60.271 57.143 4.39 0.00 0.00 3.62
45 46 1.270678 GGCCATATGAGGTACGGTTCC 60.271 57.143 3.65 0.00 0.00 3.62
46 47 1.414919 GCCATATGAGGTACGGTTCCA 59.585 52.381 3.65 0.00 0.00 3.53
47 48 2.548067 GCCATATGAGGTACGGTTCCAG 60.548 54.545 3.65 0.00 0.00 3.86
48 49 2.548067 CCATATGAGGTACGGTTCCAGC 60.548 54.545 3.65 0.00 0.00 4.85
49 50 2.154567 TATGAGGTACGGTTCCAGCT 57.845 50.000 6.57 0.00 0.00 4.24
50 51 1.276622 ATGAGGTACGGTTCCAGCTT 58.723 50.000 6.57 0.00 0.00 3.74
51 52 1.053424 TGAGGTACGGTTCCAGCTTT 58.947 50.000 6.57 0.00 0.00 3.51
52 53 1.418637 TGAGGTACGGTTCCAGCTTTT 59.581 47.619 6.57 0.00 0.00 2.27
53 54 2.074576 GAGGTACGGTTCCAGCTTTTC 58.925 52.381 6.57 0.00 0.00 2.29
54 55 1.162698 GGTACGGTTCCAGCTTTTCC 58.837 55.000 0.00 0.00 0.00 3.13
55 56 1.543871 GGTACGGTTCCAGCTTTTCCA 60.544 52.381 0.00 0.00 0.00 3.53
56 57 2.433436 GTACGGTTCCAGCTTTTCCAT 58.567 47.619 0.00 0.00 0.00 3.41
57 58 1.534729 ACGGTTCCAGCTTTTCCATC 58.465 50.000 0.00 0.00 0.00 3.51
58 59 0.447801 CGGTTCCAGCTTTTCCATCG 59.552 55.000 0.00 0.00 0.00 3.84
59 60 1.821216 GGTTCCAGCTTTTCCATCGA 58.179 50.000 0.00 0.00 0.00 3.59
60 61 2.159382 GGTTCCAGCTTTTCCATCGAA 58.841 47.619 0.00 0.00 0.00 3.71
61 62 2.755103 GGTTCCAGCTTTTCCATCGAAT 59.245 45.455 0.00 0.00 0.00 3.34
62 63 3.428045 GGTTCCAGCTTTTCCATCGAATG 60.428 47.826 0.00 0.00 0.00 2.67
73 74 3.932545 CCATCGAATGGTTCCAACAAA 57.067 42.857 0.00 0.00 45.54 2.83
74 75 4.250116 CCATCGAATGGTTCCAACAAAA 57.750 40.909 0.00 0.00 45.54 2.44
75 76 4.626042 CCATCGAATGGTTCCAACAAAAA 58.374 39.130 0.00 0.00 45.54 1.94
98 99 2.985847 GCGGGGTGCAGCTTTTCT 60.986 61.111 16.65 0.00 45.45 2.52
99 100 2.956987 CGGGGTGCAGCTTTTCTG 59.043 61.111 16.65 0.00 45.62 3.02
107 108 1.881602 CAGCTTTTCTGCAGCTCCC 59.118 57.895 9.47 0.00 44.77 4.30
108 109 1.303970 AGCTTTTCTGCAGCTCCCC 60.304 57.895 9.47 0.00 44.77 4.81
109 110 2.346541 GCTTTTCTGCAGCTCCCCC 61.347 63.158 9.47 0.00 34.15 5.40
110 111 2.034066 TTTTCTGCAGCTCCCCCG 59.966 61.111 9.47 0.00 0.00 5.73
111 112 4.722700 TTTCTGCAGCTCCCCCGC 62.723 66.667 9.47 0.00 0.00 6.13
130 131 4.778143 GCCCCGGTTGAGCGTCAT 62.778 66.667 0.00 0.00 0.00 3.06
131 132 2.511600 CCCCGGTTGAGCGTCATC 60.512 66.667 0.00 0.00 0.00 2.92
132 133 2.885644 CCCGGTTGAGCGTCATCG 60.886 66.667 0.00 0.00 40.37 3.84
147 148 2.661537 TCGCACACGAGCACTTGG 60.662 61.111 0.00 0.00 45.12 3.61
148 149 4.374702 CGCACACGAGCACTTGGC 62.375 66.667 0.00 0.00 43.93 4.52
149 150 4.030452 GCACACGAGCACTTGGCC 62.030 66.667 0.00 0.00 46.50 5.36
150 151 3.716006 CACACGAGCACTTGGCCG 61.716 66.667 0.00 0.00 46.50 6.13
158 159 3.052082 CACTTGGCCGCTGGTGAG 61.052 66.667 10.37 0.00 32.12 3.51
159 160 3.241530 ACTTGGCCGCTGGTGAGA 61.242 61.111 0.00 0.00 0.00 3.27
160 161 2.270205 CTTGGCCGCTGGTGAGAT 59.730 61.111 0.00 0.00 0.00 2.75
161 162 1.264749 ACTTGGCCGCTGGTGAGATA 61.265 55.000 0.00 0.00 0.00 1.98
162 163 0.531532 CTTGGCCGCTGGTGAGATAG 60.532 60.000 0.00 0.00 0.00 2.08
163 164 2.280457 GGCCGCTGGTGAGATAGC 60.280 66.667 0.00 0.00 36.60 2.97
164 165 2.801631 GGCCGCTGGTGAGATAGCT 61.802 63.158 0.00 0.00 37.78 3.32
165 166 1.144936 GCCGCTGGTGAGATAGCTT 59.855 57.895 0.00 0.00 37.78 3.74
166 167 1.156645 GCCGCTGGTGAGATAGCTTG 61.157 60.000 0.00 0.00 37.78 4.01
167 168 0.176680 CCGCTGGTGAGATAGCTTGT 59.823 55.000 0.00 0.00 37.78 3.16
168 169 1.284657 CGCTGGTGAGATAGCTTGTG 58.715 55.000 0.00 0.00 37.78 3.33
169 170 1.661341 GCTGGTGAGATAGCTTGTGG 58.339 55.000 0.00 0.00 36.99 4.17
170 171 1.208052 GCTGGTGAGATAGCTTGTGGA 59.792 52.381 0.00 0.00 36.99 4.02
171 172 2.741228 GCTGGTGAGATAGCTTGTGGAG 60.741 54.545 0.00 0.00 36.99 3.86
172 173 1.833630 TGGTGAGATAGCTTGTGGAGG 59.166 52.381 0.00 0.00 0.00 4.30
173 174 1.834263 GGTGAGATAGCTTGTGGAGGT 59.166 52.381 0.00 0.00 39.87 3.85
174 175 2.237392 GGTGAGATAGCTTGTGGAGGTT 59.763 50.000 0.00 0.00 37.30 3.50
175 176 3.265791 GTGAGATAGCTTGTGGAGGTTG 58.734 50.000 0.00 0.00 37.30 3.77
176 177 2.284190 GAGATAGCTTGTGGAGGTTGC 58.716 52.381 0.00 0.00 37.30 4.17
177 178 1.009829 GATAGCTTGTGGAGGTTGCG 58.990 55.000 0.00 0.00 37.30 4.85
178 179 0.613260 ATAGCTTGTGGAGGTTGCGA 59.387 50.000 0.00 0.00 37.30 5.10
179 180 0.037326 TAGCTTGTGGAGGTTGCGAG 60.037 55.000 0.00 0.00 37.30 5.03
180 181 2.328099 GCTTGTGGAGGTTGCGAGG 61.328 63.158 0.00 0.00 0.00 4.63
181 182 1.371183 CTTGTGGAGGTTGCGAGGA 59.629 57.895 0.00 0.00 0.00 3.71
182 183 0.671781 CTTGTGGAGGTTGCGAGGAG 60.672 60.000 0.00 0.00 0.00 3.69
193 194 2.507944 CGAGGAGCATGGGGGAAG 59.492 66.667 0.00 0.00 0.00 3.46
194 195 2.066393 CGAGGAGCATGGGGGAAGA 61.066 63.158 0.00 0.00 0.00 2.87
195 196 1.414061 CGAGGAGCATGGGGGAAGAT 61.414 60.000 0.00 0.00 0.00 2.40
196 197 0.849417 GAGGAGCATGGGGGAAGATT 59.151 55.000 0.00 0.00 0.00 2.40
197 198 0.554792 AGGAGCATGGGGGAAGATTG 59.445 55.000 0.00 0.00 0.00 2.67
198 199 0.259938 GGAGCATGGGGGAAGATTGT 59.740 55.000 0.00 0.00 0.00 2.71
199 200 1.396653 GAGCATGGGGGAAGATTGTG 58.603 55.000 0.00 0.00 0.00 3.33
200 201 0.032813 AGCATGGGGGAAGATTGTGG 60.033 55.000 0.00 0.00 0.00 4.17
201 202 0.033208 GCATGGGGGAAGATTGTGGA 60.033 55.000 0.00 0.00 0.00 4.02
202 203 2.025863 GCATGGGGGAAGATTGTGGAG 61.026 57.143 0.00 0.00 0.00 3.86
203 204 0.929244 ATGGGGGAAGATTGTGGAGG 59.071 55.000 0.00 0.00 0.00 4.30
204 205 0.178846 TGGGGGAAGATTGTGGAGGA 60.179 55.000 0.00 0.00 0.00 3.71
205 206 0.548510 GGGGGAAGATTGTGGAGGAG 59.451 60.000 0.00 0.00 0.00 3.69
206 207 1.290134 GGGGAAGATTGTGGAGGAGT 58.710 55.000 0.00 0.00 0.00 3.85
207 208 2.478292 GGGGAAGATTGTGGAGGAGTA 58.522 52.381 0.00 0.00 0.00 2.59
208 209 2.436173 GGGGAAGATTGTGGAGGAGTAG 59.564 54.545 0.00 0.00 0.00 2.57
209 210 3.375699 GGGAAGATTGTGGAGGAGTAGA 58.624 50.000 0.00 0.00 0.00 2.59
210 211 3.386402 GGGAAGATTGTGGAGGAGTAGAG 59.614 52.174 0.00 0.00 0.00 2.43
211 212 3.181470 GGAAGATTGTGGAGGAGTAGAGC 60.181 52.174 0.00 0.00 0.00 4.09
212 213 2.393646 AGATTGTGGAGGAGTAGAGCC 58.606 52.381 0.00 0.00 0.00 4.70
213 214 1.067821 GATTGTGGAGGAGTAGAGCCG 59.932 57.143 0.00 0.00 0.00 5.52
214 215 0.251653 TTGTGGAGGAGTAGAGCCGT 60.252 55.000 0.00 0.00 0.00 5.68
215 216 0.965866 TGTGGAGGAGTAGAGCCGTG 60.966 60.000 0.00 0.00 0.00 4.94
216 217 0.680280 GTGGAGGAGTAGAGCCGTGA 60.680 60.000 0.00 0.00 0.00 4.35
217 218 0.259065 TGGAGGAGTAGAGCCGTGAT 59.741 55.000 0.00 0.00 0.00 3.06
218 219 0.671251 GGAGGAGTAGAGCCGTGATG 59.329 60.000 0.00 0.00 0.00 3.07
219 220 0.671251 GAGGAGTAGAGCCGTGATGG 59.329 60.000 0.00 0.00 42.50 3.51
229 230 3.770040 CGTGATGGCGGGAGGTGA 61.770 66.667 0.00 0.00 0.00 4.02
230 231 2.668632 GTGATGGCGGGAGGTGAA 59.331 61.111 0.00 0.00 0.00 3.18
231 232 1.002624 GTGATGGCGGGAGGTGAAA 60.003 57.895 0.00 0.00 0.00 2.69
232 233 1.026718 GTGATGGCGGGAGGTGAAAG 61.027 60.000 0.00 0.00 0.00 2.62
233 234 1.198094 TGATGGCGGGAGGTGAAAGA 61.198 55.000 0.00 0.00 0.00 2.52
234 235 0.035439 GATGGCGGGAGGTGAAAGAA 60.035 55.000 0.00 0.00 0.00 2.52
235 236 0.404040 ATGGCGGGAGGTGAAAGAAA 59.596 50.000 0.00 0.00 0.00 2.52
236 237 0.250727 TGGCGGGAGGTGAAAGAAAG 60.251 55.000 0.00 0.00 0.00 2.62
237 238 0.036306 GGCGGGAGGTGAAAGAAAGA 59.964 55.000 0.00 0.00 0.00 2.52
238 239 1.443802 GCGGGAGGTGAAAGAAAGAG 58.556 55.000 0.00 0.00 0.00 2.85
239 240 1.946283 GCGGGAGGTGAAAGAAAGAGG 60.946 57.143 0.00 0.00 0.00 3.69
240 241 1.623811 CGGGAGGTGAAAGAAAGAGGA 59.376 52.381 0.00 0.00 0.00 3.71
241 242 2.038557 CGGGAGGTGAAAGAAAGAGGAA 59.961 50.000 0.00 0.00 0.00 3.36
242 243 3.496160 CGGGAGGTGAAAGAAAGAGGAAA 60.496 47.826 0.00 0.00 0.00 3.13
243 244 4.075682 GGGAGGTGAAAGAAAGAGGAAAG 58.924 47.826 0.00 0.00 0.00 2.62
244 245 4.075682 GGAGGTGAAAGAAAGAGGAAAGG 58.924 47.826 0.00 0.00 0.00 3.11
245 246 4.446455 GGAGGTGAAAGAAAGAGGAAAGGT 60.446 45.833 0.00 0.00 0.00 3.50
246 247 5.130705 AGGTGAAAGAAAGAGGAAAGGTT 57.869 39.130 0.00 0.00 0.00 3.50
247 248 6.262056 AGGTGAAAGAAAGAGGAAAGGTTA 57.738 37.500 0.00 0.00 0.00 2.85
248 249 6.669631 AGGTGAAAGAAAGAGGAAAGGTTAA 58.330 36.000 0.00 0.00 0.00 2.01
249 250 6.773200 AGGTGAAAGAAAGAGGAAAGGTTAAG 59.227 38.462 0.00 0.00 0.00 1.85
250 251 6.016192 GGTGAAAGAAAGAGGAAAGGTTAAGG 60.016 42.308 0.00 0.00 0.00 2.69
251 252 6.016192 GTGAAAGAAAGAGGAAAGGTTAAGGG 60.016 42.308 0.00 0.00 0.00 3.95
252 253 4.659529 AGAAAGAGGAAAGGTTAAGGGG 57.340 45.455 0.00 0.00 0.00 4.79
253 254 3.988186 AGAAAGAGGAAAGGTTAAGGGGT 59.012 43.478 0.00 0.00 0.00 4.95
254 255 5.167921 AGAAAGAGGAAAGGTTAAGGGGTA 58.832 41.667 0.00 0.00 0.00 3.69
255 256 5.613973 AGAAAGAGGAAAGGTTAAGGGGTAA 59.386 40.000 0.00 0.00 0.00 2.85
256 257 6.277283 AGAAAGAGGAAAGGTTAAGGGGTAAT 59.723 38.462 0.00 0.00 0.00 1.89
257 258 5.452341 AGAGGAAAGGTTAAGGGGTAATG 57.548 43.478 0.00 0.00 0.00 1.90
258 259 5.105853 AGAGGAAAGGTTAAGGGGTAATGA 58.894 41.667 0.00 0.00 0.00 2.57
259 260 5.554350 AGAGGAAAGGTTAAGGGGTAATGAA 59.446 40.000 0.00 0.00 0.00 2.57
260 261 6.046286 AGAGGAAAGGTTAAGGGGTAATGAAA 59.954 38.462 0.00 0.00 0.00 2.69
261 262 6.253758 AGGAAAGGTTAAGGGGTAATGAAAG 58.746 40.000 0.00 0.00 0.00 2.62
262 263 5.421056 GGAAAGGTTAAGGGGTAATGAAAGG 59.579 44.000 0.00 0.00 0.00 3.11
263 264 4.603094 AGGTTAAGGGGTAATGAAAGGG 57.397 45.455 0.00 0.00 0.00 3.95
264 265 3.271225 AGGTTAAGGGGTAATGAAAGGGG 59.729 47.826 0.00 0.00 0.00 4.79
265 266 3.012047 GGTTAAGGGGTAATGAAAGGGGT 59.988 47.826 0.00 0.00 0.00 4.95
266 267 4.275810 GTTAAGGGGTAATGAAAGGGGTC 58.724 47.826 0.00 0.00 0.00 4.46
267 268 0.916809 AGGGGTAATGAAAGGGGTCG 59.083 55.000 0.00 0.00 0.00 4.79
268 269 0.106868 GGGGTAATGAAAGGGGTCGG 60.107 60.000 0.00 0.00 0.00 4.79
269 270 0.622136 GGGTAATGAAAGGGGTCGGT 59.378 55.000 0.00 0.00 0.00 4.69
270 271 1.407851 GGGTAATGAAAGGGGTCGGTC 60.408 57.143 0.00 0.00 0.00 4.79
271 272 1.648504 GTAATGAAAGGGGTCGGTCG 58.351 55.000 0.00 0.00 0.00 4.79
272 273 0.108041 TAATGAAAGGGGTCGGTCGC 60.108 55.000 0.00 0.00 0.00 5.19
273 274 3.659089 ATGAAAGGGGTCGGTCGCG 62.659 63.158 0.00 0.00 0.00 5.87
288 289 4.250305 GCGCGGGACCCACCATAT 62.250 66.667 12.15 0.00 41.20 1.78
289 290 2.874664 GCGCGGGACCCACCATATA 61.875 63.158 12.15 0.00 41.20 0.86
290 291 1.005394 CGCGGGACCCACCATATAC 60.005 63.158 12.15 0.00 41.20 1.47
291 292 1.750341 CGCGGGACCCACCATATACA 61.750 60.000 12.15 0.00 41.20 2.29
292 293 0.250166 GCGGGACCCACCATATACAC 60.250 60.000 12.15 0.00 41.20 2.90
293 294 0.032952 CGGGACCCACCATATACACG 59.967 60.000 12.15 0.00 41.20 4.49
294 295 1.125633 GGGACCCACCATATACACGT 58.874 55.000 5.33 0.00 41.20 4.49
295 296 1.202604 GGGACCCACCATATACACGTG 60.203 57.143 15.48 15.48 41.20 4.49
296 297 1.483415 GGACCCACCATATACACGTGT 59.517 52.381 26.52 26.52 38.79 4.49
297 298 2.482490 GGACCCACCATATACACGTGTC 60.482 54.545 27.16 5.73 38.79 3.67
298 299 2.429610 GACCCACCATATACACGTGTCT 59.570 50.000 27.16 18.64 0.00 3.41
299 300 2.429610 ACCCACCATATACACGTGTCTC 59.570 50.000 27.16 0.00 0.00 3.36
300 301 2.543031 CCCACCATATACACGTGTCTCG 60.543 54.545 27.16 12.12 46.00 4.04
317 318 4.337060 GTGCGGGGCGGTTGTTTC 62.337 66.667 0.00 0.00 0.00 2.78
320 321 4.020378 CGGGGCGGTTGTTTCGTG 62.020 66.667 0.00 0.00 0.00 4.35
321 322 4.337060 GGGGCGGTTGTTTCGTGC 62.337 66.667 0.00 0.00 0.00 5.34
322 323 4.337060 GGGCGGTTGTTTCGTGCC 62.337 66.667 0.00 0.00 44.98 5.01
323 324 4.676586 GGCGGTTGTTTCGTGCCG 62.677 66.667 0.00 0.00 46.17 5.69
344 345 2.360225 GGGCCGGCGGAAAGTTTA 60.360 61.111 33.44 0.00 0.00 2.01
345 346 2.404186 GGGCCGGCGGAAAGTTTAG 61.404 63.158 33.44 0.00 0.00 1.85
346 347 2.483745 GCCGGCGGAAAGTTTAGC 59.516 61.111 33.44 6.68 0.00 3.09
347 348 3.047718 GCCGGCGGAAAGTTTAGCC 62.048 63.158 33.44 19.32 45.67 3.93
349 350 3.184206 GGCGGAAAGTTTAGCCGG 58.816 61.111 15.95 0.00 44.92 6.13
350 351 2.483745 GCGGAAAGTTTAGCCGGC 59.516 61.111 21.89 21.89 44.92 6.13
351 352 3.047718 GCGGAAAGTTTAGCCGGCC 62.048 63.158 26.15 7.74 44.92 6.13
352 353 1.673009 CGGAAAGTTTAGCCGGCCA 60.673 57.895 26.15 6.66 41.29 5.36
353 354 1.644786 CGGAAAGTTTAGCCGGCCAG 61.645 60.000 26.15 1.16 41.29 4.85
354 355 1.506718 GAAAGTTTAGCCGGCCAGC 59.493 57.895 26.15 12.83 0.00 4.85
355 356 1.934220 GAAAGTTTAGCCGGCCAGCC 61.934 60.000 26.15 9.45 0.00 4.85
368 369 2.978010 CAGCCGGCTCCAAACGTT 60.978 61.111 30.29 0.00 0.00 3.99
369 370 2.203294 AGCCGGCTCCAAACGTTT 60.203 55.556 27.08 7.96 0.00 3.60
370 371 1.826487 AGCCGGCTCCAAACGTTTT 60.826 52.632 27.08 0.00 0.00 2.43
371 372 1.066752 GCCGGCTCCAAACGTTTTT 59.933 52.632 22.15 0.00 0.00 1.94
372 373 0.937699 GCCGGCTCCAAACGTTTTTC 60.938 55.000 22.15 0.62 0.00 2.29
373 374 0.666374 CCGGCTCCAAACGTTTTTCT 59.334 50.000 11.66 0.00 0.00 2.52
374 375 1.874872 CCGGCTCCAAACGTTTTTCTA 59.125 47.619 11.66 0.00 0.00 2.10
375 376 2.291190 CCGGCTCCAAACGTTTTTCTAA 59.709 45.455 11.66 0.00 0.00 2.10
376 377 3.243134 CCGGCTCCAAACGTTTTTCTAAA 60.243 43.478 11.66 0.00 0.00 1.85
377 378 4.352887 CGGCTCCAAACGTTTTTCTAAAA 58.647 39.130 11.66 0.00 0.00 1.52
378 379 4.205588 CGGCTCCAAACGTTTTTCTAAAAC 59.794 41.667 11.66 5.23 0.00 2.43
379 380 4.505191 GGCTCCAAACGTTTTTCTAAAACC 59.495 41.667 11.66 1.69 0.00 3.27
380 381 5.103687 GCTCCAAACGTTTTTCTAAAACCA 58.896 37.500 11.66 0.00 0.00 3.67
381 382 5.577554 GCTCCAAACGTTTTTCTAAAACCAA 59.422 36.000 11.66 0.00 0.00 3.67
382 383 6.237728 GCTCCAAACGTTTTTCTAAAACCAAG 60.238 38.462 11.66 0.00 0.00 3.61
383 384 5.577554 TCCAAACGTTTTTCTAAAACCAAGC 59.422 36.000 11.66 0.00 0.00 4.01
384 385 5.220510 CCAAACGTTTTTCTAAAACCAAGCC 60.221 40.000 11.66 0.00 0.00 4.35
390 391 1.209127 CTAAAACCAAGCCCGCGTG 59.791 57.895 4.92 0.00 0.00 5.34
417 418 0.823356 ACAACTGCACACCACCATCC 60.823 55.000 0.00 0.00 0.00 3.51
421 422 0.745845 CTGCACACCACCATCCTAGC 60.746 60.000 0.00 0.00 0.00 3.42
448 449 1.067635 ACGGGTTTACATTAGCGTCGT 60.068 47.619 0.00 0.00 0.00 4.34
456 457 1.802365 ACATTAGCGTCGTTGGTTTCC 59.198 47.619 0.00 0.00 0.00 3.13
553 559 4.530710 ACTACGCCAAGAGTGAAATGTA 57.469 40.909 0.00 0.00 0.00 2.29
568 574 6.538742 AGTGAAATGTACAAAGCGCACTATAT 59.461 34.615 11.47 0.00 33.99 0.86
573 579 7.962964 ATGTACAAAGCGCACTATATAATGT 57.037 32.000 11.47 3.37 0.00 2.71
632 639 5.448225 CGAGCAATCATTTTGTGAGCACTAT 60.448 40.000 1.99 0.00 40.92 2.12
643 650 2.092211 GTGAGCACTATCGAACCAAACG 59.908 50.000 0.00 0.00 0.00 3.60
654 661 9.017509 ACTATCGAACCAAACGAGGATATTATA 57.982 33.333 0.00 0.00 42.81 0.98
783 791 2.658593 GACGTGTCACTGCAGCGT 60.659 61.111 15.27 15.00 38.55 5.07
786 794 4.017877 GTGTCACTGCAGCGTGGC 62.018 66.667 15.27 8.85 39.86 5.01
870 878 1.363744 GTGCTCCATATATGCGCTCC 58.636 55.000 19.49 10.76 34.76 4.70
934 942 1.221414 GAGCTCGCTCTCTCTCTCTC 58.779 60.000 11.49 0.00 39.80 3.20
935 943 0.833287 AGCTCGCTCTCTCTCTCTCT 59.167 55.000 0.00 0.00 0.00 3.10
936 944 1.202580 AGCTCGCTCTCTCTCTCTCTC 60.203 57.143 0.00 0.00 0.00 3.20
937 945 1.202580 GCTCGCTCTCTCTCTCTCTCT 60.203 57.143 0.00 0.00 0.00 3.10
938 946 2.748605 CTCGCTCTCTCTCTCTCTCTC 58.251 57.143 0.00 0.00 0.00 3.20
939 947 2.363680 CTCGCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
940 948 2.362397 TCGCTCTCTCTCTCTCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
941 949 2.363680 CGCTCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
942 950 3.551863 CGCTCTCTCTCTCTCTCTCTCTC 60.552 56.522 0.00 0.00 0.00 3.20
943 951 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
944 952 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
945 953 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
946 954 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
947 955 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
948 956 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
949 957 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
950 958 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
951 959 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
952 960 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
953 961 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
954 962 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
958 966 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
1037 1055 4.671590 TGGACGAGGAGGCGGTGA 62.672 66.667 0.00 0.00 35.12 4.02
1138 1168 1.354705 GCCCCTCTTCCTACAAAACCT 59.645 52.381 0.00 0.00 0.00 3.50
1159 1189 2.984623 GAGGTAACACCCCCGACC 59.015 66.667 0.00 0.00 39.75 4.79
1160 1190 1.914764 GAGGTAACACCCCCGACCA 60.915 63.158 0.00 0.00 39.75 4.02
1176 1206 0.995024 ACCATCCCTTCTCCAGGTTG 59.005 55.000 0.00 0.00 42.02 3.77
1228 1258 0.379316 GTGTTCGTGTGTTTGGTCCC 59.621 55.000 0.00 0.00 0.00 4.46
1230 1260 0.810823 GTTCGTGTGTTTGGTCCCGA 60.811 55.000 0.00 0.00 0.00 5.14
1334 1424 1.305802 TGGGTGTAGTCGCCTCCAT 60.306 57.895 0.00 0.00 43.20 3.41
1491 1640 3.627395 AGCGAGGTCAAATACATCCAA 57.373 42.857 0.00 0.00 35.44 3.53
1879 2033 4.058124 CCTTGTCTGAGATTCAAACGACA 58.942 43.478 0.00 0.00 0.00 4.35
1880 2034 4.511454 CCTTGTCTGAGATTCAAACGACAA 59.489 41.667 10.17 10.17 38.57 3.18
1949 2108 6.377146 TCTGTACATCTCAGTTACACATGCTA 59.623 38.462 0.00 0.00 34.86 3.49
1952 2111 5.414360 ACATCTCAGTTACACATGCTAGTG 58.586 41.667 7.43 7.43 44.93 2.74
1962 2121 1.337823 ACATGCTAGTGAACGTGGACC 60.338 52.381 0.00 0.00 0.00 4.46
1963 2122 0.973632 ATGCTAGTGAACGTGGACCA 59.026 50.000 0.00 0.00 0.00 4.02
1964 2123 0.753867 TGCTAGTGAACGTGGACCAA 59.246 50.000 0.00 0.00 0.00 3.67
1965 2124 1.346395 TGCTAGTGAACGTGGACCAAT 59.654 47.619 0.00 0.00 0.00 3.16
1966 2125 2.563620 TGCTAGTGAACGTGGACCAATA 59.436 45.455 0.00 0.00 0.00 1.90
1967 2126 3.196901 TGCTAGTGAACGTGGACCAATAT 59.803 43.478 0.00 0.00 0.00 1.28
1968 2127 3.555956 GCTAGTGAACGTGGACCAATATG 59.444 47.826 0.00 0.00 0.00 1.78
1969 2128 3.973206 AGTGAACGTGGACCAATATGA 57.027 42.857 0.00 0.00 0.00 2.15
1971 2130 4.000988 AGTGAACGTGGACCAATATGAAC 58.999 43.478 0.00 0.00 0.00 3.18
1973 2132 5.046878 AGTGAACGTGGACCAATATGAACTA 60.047 40.000 0.00 0.00 0.00 2.24
1974 2133 5.063060 GTGAACGTGGACCAATATGAACTAC 59.937 44.000 0.00 0.00 0.00 2.73
1976 2135 4.755411 ACGTGGACCAATATGAACTACAG 58.245 43.478 0.00 0.00 0.00 2.74
1977 2136 4.222145 ACGTGGACCAATATGAACTACAGT 59.778 41.667 0.00 0.00 0.00 3.55
1978 2137 5.419788 ACGTGGACCAATATGAACTACAGTA 59.580 40.000 0.00 0.00 0.00 2.74
1979 2138 6.097839 ACGTGGACCAATATGAACTACAGTAT 59.902 38.462 0.00 0.00 0.00 2.12
2022 2782 4.578928 TCTGGCTCTTTCCTTGTTTTACAC 59.421 41.667 0.00 0.00 0.00 2.90
2267 3028 0.962356 CCAATGTCAAGCCGCCTTCT 60.962 55.000 0.00 0.00 0.00 2.85
2292 3053 6.814146 TGTTTGGTTGAATGTTCAGGTTAAAC 59.186 34.615 13.69 13.69 38.61 2.01
2306 3067 4.825085 CAGGTTAAACTTACCCTTCTTGCA 59.175 41.667 0.00 0.00 36.27 4.08
2307 3068 5.300792 CAGGTTAAACTTACCCTTCTTGCAA 59.699 40.000 0.00 0.00 36.27 4.08
2308 3069 6.015434 CAGGTTAAACTTACCCTTCTTGCAAT 60.015 38.462 0.00 0.00 36.27 3.56
2309 3070 6.553476 AGGTTAAACTTACCCTTCTTGCAATT 59.447 34.615 0.00 0.00 36.27 2.32
2310 3071 7.070696 AGGTTAAACTTACCCTTCTTGCAATTT 59.929 33.333 0.00 0.00 36.27 1.82
2311 3072 7.713507 GGTTAAACTTACCCTTCTTGCAATTTT 59.286 33.333 0.00 0.00 0.00 1.82
2312 3073 8.547894 GTTAAACTTACCCTTCTTGCAATTTTG 58.452 33.333 0.00 0.00 0.00 2.44
2360 3121 3.564218 GATCCCCGGCCTCTGCAT 61.564 66.667 0.00 0.00 40.13 3.96
2361 3122 3.543536 GATCCCCGGCCTCTGCATC 62.544 68.421 0.00 0.00 40.13 3.91
2363 3124 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
2380 3141 3.748623 GCATGATGCATACGGCCA 58.251 55.556 13.36 0.00 44.26 5.36
2381 3142 2.260247 GCATGATGCATACGGCCAT 58.740 52.632 13.36 0.00 44.26 4.40
2407 3168 5.880054 TTTGCCTTTATCTGCTACTGTTC 57.120 39.130 0.00 0.00 0.00 3.18
2443 3204 8.263940 TGTCGAATCCCTTAAAATCTAACTTG 57.736 34.615 0.00 0.00 0.00 3.16
2722 3486 1.843851 TGGTATCATGGTCCCCAAGAC 59.156 52.381 0.00 0.00 45.51 3.01
2757 3521 5.923114 CCAGTGACGAATGATAACTATCTGG 59.077 44.000 0.00 0.00 33.88 3.86
2977 3751 5.417811 TGGTACGTCACTTCTTTTTACACA 58.582 37.500 0.00 0.00 0.00 3.72
3047 3821 7.706179 TGCTTCACCATGTTTTCTTTTCTTTAG 59.294 33.333 0.00 0.00 0.00 1.85
3139 3913 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
3245 4027 6.662414 ACAACGACAATAATGTGATACCTG 57.338 37.500 0.00 0.00 40.74 4.00
3246 4028 5.064707 ACAACGACAATAATGTGATACCTGC 59.935 40.000 0.00 0.00 40.74 4.85
3268 4078 4.607557 GCGCAATTGCATCTTTTATCATGC 60.608 41.667 28.77 15.37 44.87 4.06
3371 4181 8.141909 GGAGACAAGTTAACTTTATGCCTTTTT 58.858 33.333 18.25 0.00 33.11 1.94
3374 4184 9.738832 GACAAGTTAACTTTATGCCTTTTTACA 57.261 29.630 18.25 0.00 33.11 2.41
3468 4278 4.579454 TTACGATCGTTCCCCTATTGAG 57.421 45.455 27.88 0.00 0.00 3.02
3488 4298 6.882610 TGAGCACATTTCTCTTTAACACAT 57.117 33.333 0.00 0.00 0.00 3.21
3520 4331 2.980246 AAACTTGCCTTCCCTAAGCT 57.020 45.000 0.00 0.00 0.00 3.74
3546 4357 3.252974 ACTTTAGACCTTCAGCCGATG 57.747 47.619 0.00 0.00 0.00 3.84
3550 4361 0.975040 AGACCTTCAGCCGATGAGCT 60.975 55.000 0.00 0.00 46.45 4.09
3577 4388 9.959749 GAAAGATTGGACTTTGTACAAATGTAA 57.040 29.630 20.83 13.66 39.98 2.41
3795 4608 1.948834 CCATGATGCTTGGATGCGTAA 59.051 47.619 0.00 0.00 36.26 3.18
3944 4757 1.202521 TGCTGACGTGATTGACTGTGT 60.203 47.619 0.00 0.00 0.00 3.72
3964 4777 5.296780 TGTGTCCTTCAAGTGACAAAAGATC 59.703 40.000 9.51 0.00 42.67 2.75
4057 4870 4.115516 CCGTACATCTGTCATTCCTGAAG 58.884 47.826 0.00 0.00 31.85 3.02
4161 4977 5.769484 ATCACAGCATGGAGATGATTTTC 57.231 39.130 0.00 0.00 43.62 2.29
4356 5172 3.202906 TGGGAAGTTTGTCAAGTTCTCG 58.797 45.455 8.76 0.00 43.49 4.04
4370 5186 4.625607 AGTTCTCGGACTTTCTGGAATT 57.374 40.909 0.00 0.00 0.00 2.17
4463 5279 8.245195 TCAATTTTAATCCCTTAGGTTATGCC 57.755 34.615 0.00 0.00 37.58 4.40
4604 5732 9.149225 GATGTCATGACCATGTATTCTCTTATC 57.851 37.037 22.85 9.81 39.72 1.75
4619 5747 6.611613 TCTCTTATCGGCAAGGAATATGAT 57.388 37.500 0.00 0.00 0.00 2.45
4641 5769 7.915508 TGATAATCATGAAATGTACCGAACAC 58.084 34.615 0.00 0.00 46.80 3.32
4992 6123 5.660417 AGTCATGATCCAGTCAACAGATAGT 59.340 40.000 0.00 0.00 40.97 2.12
5053 6184 1.692519 AGCTTGTTTACACTCTCCCGT 59.307 47.619 0.00 0.00 0.00 5.28
5065 6196 2.933287 TCCCGTCAGGCATTGGGT 60.933 61.111 0.51 0.00 42.54 4.51
5066 6197 2.438434 CCCGTCAGGCATTGGGTC 60.438 66.667 0.00 0.00 36.86 4.46
5075 6206 0.610232 GGCATTGGGTCTGCTTCTGT 60.610 55.000 0.00 0.00 39.60 3.41
5086 6217 4.503296 GGTCTGCTTCTGTTTCCTCACTAA 60.503 45.833 0.00 0.00 0.00 2.24
5106 6237 6.428159 CACTAACAGATGTTAAGGAGTTTGCT 59.572 38.462 6.85 0.00 39.70 3.91
5169 6300 5.713025 AGTGTGCATTTTATCATCAACCAC 58.287 37.500 0.00 0.00 0.00 4.16
5366 6497 7.339976 AGTGAGGAGATACAAGAGTAAGTTACC 59.660 40.741 9.46 1.85 33.13 2.85
5482 6658 7.121168 GGGCATTCATATAGCTAACAGCAATAA 59.879 37.037 0.00 0.00 45.56 1.40
5532 6708 5.701290 AGTGACAGTATTTGACCTTTGCTAC 59.299 40.000 0.00 0.00 0.00 3.58
5613 6790 1.736645 CGTTACTGTCGGTGGCCTG 60.737 63.158 3.32 0.00 0.00 4.85
5741 6918 1.966762 CGCCCAAGAATGCACCTTT 59.033 52.632 0.00 0.00 0.00 3.11
5786 6963 1.962822 CGCCTTCTGCTGCTCACAA 60.963 57.895 0.00 0.00 38.05 3.33
5823 7000 0.677731 GCATTCTGCTGGTAGTGGCA 60.678 55.000 0.00 0.00 40.96 4.92
5935 7118 7.041508 AGCTATCATCTTGCTATTTTGTGCTAC 60.042 37.037 0.00 0.00 33.98 3.58
5937 7120 6.182039 TCATCTTGCTATTTTGTGCTACAC 57.818 37.500 0.00 0.00 34.56 2.90
5939 7122 5.356882 TCTTGCTATTTTGTGCTACACAC 57.643 39.130 0.00 0.00 44.47 3.82
5948 7131 3.842869 TGCTACACACACACACACA 57.157 47.368 0.00 0.00 0.00 3.72
5949 7132 1.364721 TGCTACACACACACACACAC 58.635 50.000 0.00 0.00 0.00 3.82
5952 7135 2.342179 CTACACACACACACACACACA 58.658 47.619 0.00 0.00 0.00 3.72
5953 7136 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5954 7137 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5955 7138 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5956 7139 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5957 7140 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5958 7141 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5959 7142 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5960 7143 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5961 7144 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5962 7145 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5963 7146 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5964 7147 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5965 7148 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5966 7149 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5967 7150 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5968 7151 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5969 7152 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5970 7153 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5971 7154 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5972 7155 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5973 7156 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5974 7157 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5975 7158 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5989 7172 3.809279 CACACACACACACACACATATCT 59.191 43.478 0.00 0.00 0.00 1.98
6078 7262 3.194755 TCGGTTTATCACTCTAGCAAGCA 59.805 43.478 0.00 0.00 0.00 3.91
6216 7406 2.226437 GCGCTGTGAAAATTGAGGAAGA 59.774 45.455 0.00 0.00 0.00 2.87
6231 7421 6.166984 TGAGGAAGAGTGCATATTTCTAGG 57.833 41.667 0.00 0.00 0.00 3.02
6235 7425 6.156949 AGGAAGAGTGCATATTTCTAGGTTCA 59.843 38.462 0.00 0.00 0.00 3.18
6236 7426 6.481644 GGAAGAGTGCATATTTCTAGGTTCAG 59.518 42.308 0.00 0.00 0.00 3.02
6237 7427 5.363939 AGAGTGCATATTTCTAGGTTCAGC 58.636 41.667 0.00 0.00 0.00 4.26
6238 7428 4.455606 AGTGCATATTTCTAGGTTCAGCC 58.544 43.478 0.00 0.00 37.58 4.85
6239 7429 4.080356 AGTGCATATTTCTAGGTTCAGCCA 60.080 41.667 0.00 0.00 40.61 4.75
6240 7430 4.823989 GTGCATATTTCTAGGTTCAGCCAT 59.176 41.667 0.00 0.00 40.61 4.40
6241 7431 5.300286 GTGCATATTTCTAGGTTCAGCCATT 59.700 40.000 0.00 0.00 40.61 3.16
6242 7432 5.532406 TGCATATTTCTAGGTTCAGCCATTC 59.468 40.000 0.00 0.00 40.61 2.67
6253 7443 3.334583 TCAGCCATTCAGGTGTAAGAC 57.665 47.619 0.00 0.00 40.61 3.01
6274 7464 4.251268 ACCTCGGCAGTGTTAAATAAGTC 58.749 43.478 0.00 0.00 0.00 3.01
6313 7503 1.069022 CCGAAGAAACATGTGTGCAGG 60.069 52.381 0.00 0.00 0.00 4.85
6316 7506 1.609208 AGAAACATGTGTGCAGGACC 58.391 50.000 0.00 0.00 0.00 4.46
6318 7508 1.680735 GAAACATGTGTGCAGGACCAA 59.319 47.619 0.00 0.00 0.00 3.67
6319 7509 1.321474 AACATGTGTGCAGGACCAAG 58.679 50.000 0.00 0.00 0.00 3.61
6320 7510 0.473755 ACATGTGTGCAGGACCAAGA 59.526 50.000 0.00 0.00 0.00 3.02
6326 7561 0.947244 GTGCAGGACCAAGACAAGTG 59.053 55.000 0.00 0.00 0.00 3.16
6327 7562 0.819259 TGCAGGACCAAGACAAGTGC 60.819 55.000 0.00 0.00 0.00 4.40
6334 7569 1.285023 CAAGACAAGTGCAGGCAGC 59.715 57.895 0.00 0.00 45.96 5.25
6347 7582 3.898529 GCAGGCAGCAATCTGATTATTC 58.101 45.455 1.98 0.00 42.95 1.75
6352 7587 2.545526 CAGCAATCTGATTATTCGGCGT 59.454 45.455 6.85 0.00 42.95 5.68
6357 7592 5.404366 GCAATCTGATTATTCGGCGTTAGTA 59.596 40.000 6.85 0.00 0.00 1.82
6371 7606 5.050363 CGGCGTTAGTATGTAAAATCAGCAT 60.050 40.000 0.00 0.00 0.00 3.79
6402 7637 1.203287 GAGAAAACCAGCCAGGATTGC 59.797 52.381 0.00 0.00 41.22 3.56
6446 7681 8.682016 GCCGAACAAAATATTCAGATAAAATCG 58.318 33.333 0.00 0.00 0.00 3.34
6448 7683 8.682016 CGAACAAAATATTCAGATAAAATCGCC 58.318 33.333 0.00 0.00 0.00 5.54
6449 7684 9.515020 GAACAAAATATTCAGATAAAATCGCCA 57.485 29.630 0.00 0.00 0.00 5.69
6450 7685 9.520204 AACAAAATATTCAGATAAAATCGCCAG 57.480 29.630 0.00 0.00 0.00 4.85
6452 7687 9.903682 CAAAATATTCAGATAAAATCGCCAGAT 57.096 29.630 0.00 0.00 39.12 2.90
6467 7702 3.551046 CGCCAGATATCTGTGTCACCTAC 60.551 52.174 27.03 7.59 42.27 3.18
6477 7712 5.931294 TCTGTGTCACCTACAAACCATTAA 58.069 37.500 0.00 0.00 40.63 1.40
6483 7718 4.998672 TCACCTACAAACCATTAAGTTCGG 59.001 41.667 0.00 0.00 0.00 4.30
6486 7721 1.538075 ACAAACCATTAAGTTCGGGCG 59.462 47.619 0.00 0.00 0.00 6.13
6507 7743 4.201576 CGAAGCGTCTCAAAACAACTTAC 58.798 43.478 0.00 0.00 0.00 2.34
6523 7759 7.160547 ACAACTTACCTTTTTCTCCGAAAAA 57.839 32.000 12.33 12.33 0.00 1.94
6544 7799 2.400467 AGGAGGCTGTACCCGATTAT 57.600 50.000 0.00 0.00 40.58 1.28
6546 7801 2.158295 AGGAGGCTGTACCCGATTATCT 60.158 50.000 0.00 0.00 40.58 1.98
6551 7806 3.502920 GCTGTACCCGATTATCTCATCG 58.497 50.000 0.00 0.00 44.78 3.84
6586 7999 8.961634 TGATATTCTCTCGGTTATAAGATCCAG 58.038 37.037 0.00 0.00 0.00 3.86
6599 8012 1.625818 AGATCCAGCGGAACAAACTCT 59.374 47.619 1.44 0.00 34.34 3.24
6609 8022 4.065088 CGGAACAAACTCTCCAAAGATGA 58.935 43.478 0.00 0.00 0.00 2.92
6629 8042 0.463833 GACCGCCGGAATCTTGGATT 60.464 55.000 11.71 0.00 0.00 3.01
6642 8055 3.858886 TGGATTTCACCCAAGCCAA 57.141 47.368 0.00 0.00 39.30 4.52
6643 8056 1.337118 TGGATTTCACCCAAGCCAAC 58.663 50.000 0.00 0.00 39.30 3.77
6647 8060 4.966787 TCACCCAAGCCAACGCCC 62.967 66.667 0.00 0.00 34.57 6.13
6653 8066 2.037136 CAAGCCAACGCCCTGAGAG 61.037 63.158 0.00 0.00 34.57 3.20
6682 8095 4.899239 CCGGCTCCTCGTCATGCC 62.899 72.222 0.00 0.00 41.76 4.40
6707 8120 1.531602 GGTTCAGCAGGGCAGGTTT 60.532 57.895 0.00 0.00 0.00 3.27
6712 8125 2.116125 GCAGGGCAGGTTTGAGGT 59.884 61.111 0.00 0.00 0.00 3.85
6718 8131 1.515521 GGCAGGTTTGAGGTTGTCCG 61.516 60.000 0.00 0.00 39.05 4.79
6785 8198 2.124403 CCTGGCCATGAGCAGACC 60.124 66.667 5.51 0.00 46.50 3.85
6819 8232 1.369625 CAAACGGCAGATACTCCACC 58.630 55.000 0.00 0.00 0.00 4.61
6821 8234 0.968901 AACGGCAGATACTCCACCGA 60.969 55.000 6.76 0.00 46.71 4.69
6822 8235 1.360551 CGGCAGATACTCCACCGAG 59.639 63.158 0.00 0.00 46.71 4.63
6823 8236 1.742768 GGCAGATACTCCACCGAGG 59.257 63.158 0.00 0.00 40.77 4.63
6824 8237 1.742768 GCAGATACTCCACCGAGGG 59.257 63.158 0.00 0.00 40.77 4.30
6825 8238 1.043673 GCAGATACTCCACCGAGGGT 61.044 60.000 0.00 0.00 40.77 4.34
6826 8239 1.033574 CAGATACTCCACCGAGGGTC 58.966 60.000 0.00 0.00 40.77 4.46
6827 8240 0.106116 AGATACTCCACCGAGGGTCC 60.106 60.000 0.00 0.00 40.77 4.46
6828 8241 1.453762 GATACTCCACCGAGGGTCCG 61.454 65.000 0.00 0.00 40.77 4.79
6829 8242 1.929860 ATACTCCACCGAGGGTCCGA 61.930 60.000 0.00 0.00 40.77 4.55
6830 8243 2.547640 TACTCCACCGAGGGTCCGAG 62.548 65.000 6.80 6.80 40.77 4.63
6831 8244 4.753662 TCCACCGAGGGTCCGAGG 62.754 72.222 0.00 3.05 38.24 4.63
6839 8252 3.787001 GGGTCCGAGGCCCAGAAG 61.787 72.222 14.15 0.00 45.40 2.85
6840 8253 2.683933 GGTCCGAGGCCCAGAAGA 60.684 66.667 0.00 0.00 0.00 2.87
6841 8254 2.726351 GGTCCGAGGCCCAGAAGAG 61.726 68.421 0.00 0.00 0.00 2.85
6842 8255 3.077556 TCCGAGGCCCAGAAGAGC 61.078 66.667 0.00 0.00 0.00 4.09
6843 8256 3.393970 CCGAGGCCCAGAAGAGCA 61.394 66.667 0.00 0.00 0.00 4.26
6844 8257 2.186384 CGAGGCCCAGAAGAGCAG 59.814 66.667 0.00 0.00 0.00 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.344102 CCTTTCTTCCGTACCTCATATGGA 59.656 45.833 2.13 0.00 45.78 3.41
3 4 4.503296 CCCTTTCTTCCGTACCTCATATGG 60.503 50.000 2.13 0.00 40.95 2.74
4 5 4.632153 CCCTTTCTTCCGTACCTCATATG 58.368 47.826 0.00 0.00 0.00 1.78
5 6 3.071167 GCCCTTTCTTCCGTACCTCATAT 59.929 47.826 0.00 0.00 0.00 1.78
6 7 2.433239 GCCCTTTCTTCCGTACCTCATA 59.567 50.000 0.00 0.00 0.00 2.15
7 8 1.209747 GCCCTTTCTTCCGTACCTCAT 59.790 52.381 0.00 0.00 0.00 2.90
8 9 0.611714 GCCCTTTCTTCCGTACCTCA 59.388 55.000 0.00 0.00 0.00 3.86
10 11 0.838987 TGGCCCTTTCTTCCGTACCT 60.839 55.000 0.00 0.00 0.00 3.08
12 13 2.994186 TATGGCCCTTTCTTCCGTAC 57.006 50.000 0.00 0.00 0.00 3.67
13 14 3.042682 TCATATGGCCCTTTCTTCCGTA 58.957 45.455 0.00 0.00 0.00 4.02
14 15 1.843851 TCATATGGCCCTTTCTTCCGT 59.156 47.619 0.00 0.00 0.00 4.69
15 16 2.498167 CTCATATGGCCCTTTCTTCCG 58.502 52.381 0.00 0.00 0.00 4.30
16 17 2.175715 ACCTCATATGGCCCTTTCTTCC 59.824 50.000 0.00 0.00 0.00 3.46
17 18 3.584733 ACCTCATATGGCCCTTTCTTC 57.415 47.619 0.00 0.00 0.00 2.87
18 19 3.181454 CGTACCTCATATGGCCCTTTCTT 60.181 47.826 0.00 0.00 0.00 2.52
19 20 2.368875 CGTACCTCATATGGCCCTTTCT 59.631 50.000 0.00 0.00 0.00 2.52
20 21 2.550208 CCGTACCTCATATGGCCCTTTC 60.550 54.545 0.00 0.00 33.01 2.62
21 22 1.420138 CCGTACCTCATATGGCCCTTT 59.580 52.381 0.00 0.00 33.01 3.11
22 23 1.056660 CCGTACCTCATATGGCCCTT 58.943 55.000 0.00 0.00 33.01 3.95
23 24 0.105142 ACCGTACCTCATATGGCCCT 60.105 55.000 0.00 0.00 43.12 5.19
24 25 0.763035 AACCGTACCTCATATGGCCC 59.237 55.000 0.00 0.00 43.12 5.80
25 26 1.270678 GGAACCGTACCTCATATGGCC 60.271 57.143 2.13 0.00 43.12 5.36
26 27 1.414919 TGGAACCGTACCTCATATGGC 59.585 52.381 2.13 0.00 43.12 4.40
27 28 2.548067 GCTGGAACCGTACCTCATATGG 60.548 54.545 2.13 0.00 44.69 2.74
28 29 2.365617 AGCTGGAACCGTACCTCATATG 59.634 50.000 0.00 0.00 0.00 1.78
29 30 2.679082 AGCTGGAACCGTACCTCATAT 58.321 47.619 0.00 0.00 0.00 1.78
30 31 2.154567 AGCTGGAACCGTACCTCATA 57.845 50.000 0.00 0.00 0.00 2.15
31 32 1.276622 AAGCTGGAACCGTACCTCAT 58.723 50.000 0.00 0.00 0.00 2.90
32 33 1.053424 AAAGCTGGAACCGTACCTCA 58.947 50.000 0.00 0.00 0.00 3.86
33 34 2.074576 GAAAAGCTGGAACCGTACCTC 58.925 52.381 0.00 0.00 0.00 3.85
34 35 1.271217 GGAAAAGCTGGAACCGTACCT 60.271 52.381 0.00 0.00 0.00 3.08
35 36 1.162698 GGAAAAGCTGGAACCGTACC 58.837 55.000 0.00 0.00 0.00 3.34
36 37 1.886886 TGGAAAAGCTGGAACCGTAC 58.113 50.000 0.00 0.00 0.00 3.67
37 38 2.706890 GATGGAAAAGCTGGAACCGTA 58.293 47.619 0.00 0.00 0.00 4.02
38 39 1.534729 GATGGAAAAGCTGGAACCGT 58.465 50.000 0.00 0.00 0.00 4.83
39 40 0.447801 CGATGGAAAAGCTGGAACCG 59.552 55.000 0.00 0.00 0.00 4.44
40 41 1.821216 TCGATGGAAAAGCTGGAACC 58.179 50.000 0.00 0.00 0.00 3.62
41 42 3.762779 CATTCGATGGAAAAGCTGGAAC 58.237 45.455 0.00 0.00 35.40 3.62
81 82 2.985847 AGAAAAGCTGCACCCCGC 60.986 61.111 1.02 0.00 42.89 6.13
82 83 2.956987 CAGAAAAGCTGCACCCCG 59.043 61.111 1.02 0.00 37.90 5.73
91 92 2.346541 GGGGGAGCTGCAGAAAAGC 61.347 63.158 20.43 1.38 41.15 3.51
92 93 2.042831 CGGGGGAGCTGCAGAAAAG 61.043 63.158 20.43 0.00 0.00 2.27
93 94 2.034066 CGGGGGAGCTGCAGAAAA 59.966 61.111 20.43 0.00 0.00 2.29
94 95 4.722700 GCGGGGGAGCTGCAGAAA 62.723 66.667 20.43 0.00 0.00 2.52
113 114 4.778143 ATGACGCTCAACCGGGGC 62.778 66.667 6.32 3.48 0.00 5.80
114 115 2.511600 GATGACGCTCAACCGGGG 60.512 66.667 6.32 0.00 0.00 5.73
115 116 2.885644 CGATGACGCTCAACCGGG 60.886 66.667 6.32 0.00 0.00 5.73
125 126 2.804931 TGCTCGTGTGCGATGACG 60.805 61.111 0.00 0.00 46.80 4.35
126 127 1.284982 AAGTGCTCGTGTGCGATGAC 61.285 55.000 0.00 0.00 46.80 3.06
127 128 1.006220 AAGTGCTCGTGTGCGATGA 60.006 52.632 0.00 0.00 46.80 2.92
128 129 1.131218 CAAGTGCTCGTGTGCGATG 59.869 57.895 0.00 0.00 46.80 3.84
129 130 2.029288 CCAAGTGCTCGTGTGCGAT 61.029 57.895 1.21 0.00 46.80 4.58
130 131 2.661537 CCAAGTGCTCGTGTGCGA 60.662 61.111 1.21 0.00 45.79 5.10
131 132 4.374702 GCCAAGTGCTCGTGTGCG 62.375 66.667 1.21 0.00 36.87 5.34
132 133 4.030452 GGCCAAGTGCTCGTGTGC 62.030 66.667 0.00 4.32 40.92 4.57
133 134 3.716006 CGGCCAAGTGCTCGTGTG 61.716 66.667 2.24 0.00 40.92 3.82
141 142 2.809861 ATCTCACCAGCGGCCAAGTG 62.810 60.000 2.24 4.19 0.00 3.16
142 143 1.264749 TATCTCACCAGCGGCCAAGT 61.265 55.000 2.24 0.00 0.00 3.16
143 144 0.531532 CTATCTCACCAGCGGCCAAG 60.532 60.000 2.24 0.00 0.00 3.61
144 145 1.522092 CTATCTCACCAGCGGCCAA 59.478 57.895 2.24 0.00 0.00 4.52
145 146 3.094062 GCTATCTCACCAGCGGCCA 62.094 63.158 2.24 0.00 0.00 5.36
146 147 2.280457 GCTATCTCACCAGCGGCC 60.280 66.667 0.00 0.00 0.00 6.13
147 148 1.144936 AAGCTATCTCACCAGCGGC 59.855 57.895 0.00 0.00 42.74 6.53
148 149 0.176680 ACAAGCTATCTCACCAGCGG 59.823 55.000 0.00 0.00 42.74 5.52
149 150 1.284657 CACAAGCTATCTCACCAGCG 58.715 55.000 0.00 0.00 42.74 5.18
150 151 1.208052 TCCACAAGCTATCTCACCAGC 59.792 52.381 0.00 0.00 38.09 4.85
151 152 2.158986 CCTCCACAAGCTATCTCACCAG 60.159 54.545 0.00 0.00 0.00 4.00
152 153 1.833630 CCTCCACAAGCTATCTCACCA 59.166 52.381 0.00 0.00 0.00 4.17
153 154 1.834263 ACCTCCACAAGCTATCTCACC 59.166 52.381 0.00 0.00 0.00 4.02
154 155 3.265791 CAACCTCCACAAGCTATCTCAC 58.734 50.000 0.00 0.00 0.00 3.51
155 156 2.355108 GCAACCTCCACAAGCTATCTCA 60.355 50.000 0.00 0.00 0.00 3.27
156 157 2.284190 GCAACCTCCACAAGCTATCTC 58.716 52.381 0.00 0.00 0.00 2.75
157 158 1.406069 CGCAACCTCCACAAGCTATCT 60.406 52.381 0.00 0.00 0.00 1.98
158 159 1.009829 CGCAACCTCCACAAGCTATC 58.990 55.000 0.00 0.00 0.00 2.08
159 160 0.613260 TCGCAACCTCCACAAGCTAT 59.387 50.000 0.00 0.00 0.00 2.97
160 161 0.037326 CTCGCAACCTCCACAAGCTA 60.037 55.000 0.00 0.00 0.00 3.32
161 162 1.302033 CTCGCAACCTCCACAAGCT 60.302 57.895 0.00 0.00 0.00 3.74
162 163 2.328099 CCTCGCAACCTCCACAAGC 61.328 63.158 0.00 0.00 0.00 4.01
163 164 0.671781 CTCCTCGCAACCTCCACAAG 60.672 60.000 0.00 0.00 0.00 3.16
164 165 1.371183 CTCCTCGCAACCTCCACAA 59.629 57.895 0.00 0.00 0.00 3.33
165 166 3.059982 CTCCTCGCAACCTCCACA 58.940 61.111 0.00 0.00 0.00 4.17
166 167 2.435059 GCTCCTCGCAACCTCCAC 60.435 66.667 0.00 0.00 38.92 4.02
175 176 3.764160 CTTCCCCCATGCTCCTCGC 62.764 68.421 0.00 0.00 39.77 5.03
176 177 1.414061 ATCTTCCCCCATGCTCCTCG 61.414 60.000 0.00 0.00 0.00 4.63
177 178 0.849417 AATCTTCCCCCATGCTCCTC 59.151 55.000 0.00 0.00 0.00 3.71
178 179 0.554792 CAATCTTCCCCCATGCTCCT 59.445 55.000 0.00 0.00 0.00 3.69
179 180 0.259938 ACAATCTTCCCCCATGCTCC 59.740 55.000 0.00 0.00 0.00 4.70
180 181 1.396653 CACAATCTTCCCCCATGCTC 58.603 55.000 0.00 0.00 0.00 4.26
181 182 0.032813 CCACAATCTTCCCCCATGCT 60.033 55.000 0.00 0.00 0.00 3.79
182 183 0.033208 TCCACAATCTTCCCCCATGC 60.033 55.000 0.00 0.00 0.00 4.06
183 184 1.410648 CCTCCACAATCTTCCCCCATG 60.411 57.143 0.00 0.00 0.00 3.66
184 185 0.929244 CCTCCACAATCTTCCCCCAT 59.071 55.000 0.00 0.00 0.00 4.00
185 186 0.178846 TCCTCCACAATCTTCCCCCA 60.179 55.000 0.00 0.00 0.00 4.96
186 187 0.548510 CTCCTCCACAATCTTCCCCC 59.451 60.000 0.00 0.00 0.00 5.40
187 188 1.290134 ACTCCTCCACAATCTTCCCC 58.710 55.000 0.00 0.00 0.00 4.81
188 189 3.375699 TCTACTCCTCCACAATCTTCCC 58.624 50.000 0.00 0.00 0.00 3.97
189 190 3.181470 GCTCTACTCCTCCACAATCTTCC 60.181 52.174 0.00 0.00 0.00 3.46
190 191 3.181470 GGCTCTACTCCTCCACAATCTTC 60.181 52.174 0.00 0.00 0.00 2.87
191 192 2.769095 GGCTCTACTCCTCCACAATCTT 59.231 50.000 0.00 0.00 0.00 2.40
192 193 2.393646 GGCTCTACTCCTCCACAATCT 58.606 52.381 0.00 0.00 0.00 2.40
193 194 1.067821 CGGCTCTACTCCTCCACAATC 59.932 57.143 0.00 0.00 0.00 2.67
194 195 1.115467 CGGCTCTACTCCTCCACAAT 58.885 55.000 0.00 0.00 0.00 2.71
195 196 0.251653 ACGGCTCTACTCCTCCACAA 60.252 55.000 0.00 0.00 0.00 3.33
196 197 0.965866 CACGGCTCTACTCCTCCACA 60.966 60.000 0.00 0.00 0.00 4.17
197 198 0.680280 TCACGGCTCTACTCCTCCAC 60.680 60.000 0.00 0.00 0.00 4.02
198 199 0.259065 ATCACGGCTCTACTCCTCCA 59.741 55.000 0.00 0.00 0.00 3.86
199 200 0.671251 CATCACGGCTCTACTCCTCC 59.329 60.000 0.00 0.00 0.00 4.30
200 201 0.671251 CCATCACGGCTCTACTCCTC 59.329 60.000 0.00 0.00 0.00 3.71
201 202 2.814023 CCATCACGGCTCTACTCCT 58.186 57.895 0.00 0.00 0.00 3.69
212 213 2.796483 TTTCACCTCCCGCCATCACG 62.796 60.000 0.00 0.00 0.00 4.35
213 214 1.002624 TTTCACCTCCCGCCATCAC 60.003 57.895 0.00 0.00 0.00 3.06
214 215 1.198094 TCTTTCACCTCCCGCCATCA 61.198 55.000 0.00 0.00 0.00 3.07
215 216 0.035439 TTCTTTCACCTCCCGCCATC 60.035 55.000 0.00 0.00 0.00 3.51
216 217 0.404040 TTTCTTTCACCTCCCGCCAT 59.596 50.000 0.00 0.00 0.00 4.40
217 218 0.250727 CTTTCTTTCACCTCCCGCCA 60.251 55.000 0.00 0.00 0.00 5.69
218 219 0.036306 TCTTTCTTTCACCTCCCGCC 59.964 55.000 0.00 0.00 0.00 6.13
219 220 1.443802 CTCTTTCTTTCACCTCCCGC 58.556 55.000 0.00 0.00 0.00 6.13
220 221 1.623811 TCCTCTTTCTTTCACCTCCCG 59.376 52.381 0.00 0.00 0.00 5.14
221 222 3.790089 TTCCTCTTTCTTTCACCTCCC 57.210 47.619 0.00 0.00 0.00 4.30
222 223 4.075682 CCTTTCCTCTTTCTTTCACCTCC 58.924 47.826 0.00 0.00 0.00 4.30
223 224 4.720046 ACCTTTCCTCTTTCTTTCACCTC 58.280 43.478 0.00 0.00 0.00 3.85
224 225 4.797912 ACCTTTCCTCTTTCTTTCACCT 57.202 40.909 0.00 0.00 0.00 4.00
225 226 6.016192 CCTTAACCTTTCCTCTTTCTTTCACC 60.016 42.308 0.00 0.00 0.00 4.02
226 227 6.016192 CCCTTAACCTTTCCTCTTTCTTTCAC 60.016 42.308 0.00 0.00 0.00 3.18
227 228 6.068670 CCCTTAACCTTTCCTCTTTCTTTCA 58.931 40.000 0.00 0.00 0.00 2.69
228 229 5.477291 CCCCTTAACCTTTCCTCTTTCTTTC 59.523 44.000 0.00 0.00 0.00 2.62
229 230 5.103215 ACCCCTTAACCTTTCCTCTTTCTTT 60.103 40.000 0.00 0.00 0.00 2.52
230 231 4.419200 ACCCCTTAACCTTTCCTCTTTCTT 59.581 41.667 0.00 0.00 0.00 2.52
231 232 3.988186 ACCCCTTAACCTTTCCTCTTTCT 59.012 43.478 0.00 0.00 0.00 2.52
232 233 4.383931 ACCCCTTAACCTTTCCTCTTTC 57.616 45.455 0.00 0.00 0.00 2.62
233 234 5.935668 TTACCCCTTAACCTTTCCTCTTT 57.064 39.130 0.00 0.00 0.00 2.52
234 235 5.554350 TCATTACCCCTTAACCTTTCCTCTT 59.446 40.000 0.00 0.00 0.00 2.85
235 236 5.105853 TCATTACCCCTTAACCTTTCCTCT 58.894 41.667 0.00 0.00 0.00 3.69
236 237 5.446260 TCATTACCCCTTAACCTTTCCTC 57.554 43.478 0.00 0.00 0.00 3.71
237 238 5.871324 TTCATTACCCCTTAACCTTTCCT 57.129 39.130 0.00 0.00 0.00 3.36
238 239 5.421056 CCTTTCATTACCCCTTAACCTTTCC 59.579 44.000 0.00 0.00 0.00 3.13
239 240 5.421056 CCCTTTCATTACCCCTTAACCTTTC 59.579 44.000 0.00 0.00 0.00 2.62
240 241 5.338632 CCCTTTCATTACCCCTTAACCTTT 58.661 41.667 0.00 0.00 0.00 3.11
241 242 4.264668 CCCCTTTCATTACCCCTTAACCTT 60.265 45.833 0.00 0.00 0.00 3.50
242 243 3.271225 CCCCTTTCATTACCCCTTAACCT 59.729 47.826 0.00 0.00 0.00 3.50
243 244 3.012047 ACCCCTTTCATTACCCCTTAACC 59.988 47.826 0.00 0.00 0.00 2.85
244 245 4.275810 GACCCCTTTCATTACCCCTTAAC 58.724 47.826 0.00 0.00 0.00 2.01
245 246 3.054213 CGACCCCTTTCATTACCCCTTAA 60.054 47.826 0.00 0.00 0.00 1.85
246 247 2.506644 CGACCCCTTTCATTACCCCTTA 59.493 50.000 0.00 0.00 0.00 2.69
247 248 1.283905 CGACCCCTTTCATTACCCCTT 59.716 52.381 0.00 0.00 0.00 3.95
248 249 0.916809 CGACCCCTTTCATTACCCCT 59.083 55.000 0.00 0.00 0.00 4.79
249 250 0.106868 CCGACCCCTTTCATTACCCC 60.107 60.000 0.00 0.00 0.00 4.95
250 251 0.622136 ACCGACCCCTTTCATTACCC 59.378 55.000 0.00 0.00 0.00 3.69
251 252 1.741394 CGACCGACCCCTTTCATTACC 60.741 57.143 0.00 0.00 0.00 2.85
252 253 1.648504 CGACCGACCCCTTTCATTAC 58.351 55.000 0.00 0.00 0.00 1.89
253 254 0.108041 GCGACCGACCCCTTTCATTA 60.108 55.000 0.00 0.00 0.00 1.90
254 255 1.376812 GCGACCGACCCCTTTCATT 60.377 57.895 0.00 0.00 0.00 2.57
255 256 2.267961 GCGACCGACCCCTTTCAT 59.732 61.111 0.00 0.00 0.00 2.57
256 257 4.367023 CGCGACCGACCCCTTTCA 62.367 66.667 0.00 0.00 36.29 2.69
271 272 2.874664 TATATGGTGGGTCCCGCGC 61.875 63.158 15.47 8.96 34.37 6.86
272 273 1.005394 GTATATGGTGGGTCCCGCG 60.005 63.158 15.47 0.00 34.37 6.46
273 274 0.250166 GTGTATATGGTGGGTCCCGC 60.250 60.000 13.61 13.61 34.77 6.13
274 275 0.032952 CGTGTATATGGTGGGTCCCG 59.967 60.000 2.65 0.00 34.77 5.14
275 276 1.125633 ACGTGTATATGGTGGGTCCC 58.874 55.000 0.00 0.00 34.77 4.46
276 277 1.483415 ACACGTGTATATGGTGGGTCC 59.517 52.381 21.98 0.00 36.02 4.46
277 278 2.429610 AGACACGTGTATATGGTGGGTC 59.570 50.000 23.44 4.22 36.02 4.46
278 279 2.429610 GAGACACGTGTATATGGTGGGT 59.570 50.000 23.44 0.00 36.02 4.51
279 280 2.543031 CGAGACACGTGTATATGGTGGG 60.543 54.545 23.44 0.00 36.02 4.61
280 281 2.727777 CGAGACACGTGTATATGGTGG 58.272 52.381 23.44 1.51 36.02 4.61
300 301 4.337060 GAAACAACCGCCCCGCAC 62.337 66.667 0.00 0.00 0.00 5.34
303 304 4.020378 CACGAAACAACCGCCCCG 62.020 66.667 0.00 0.00 0.00 5.73
304 305 4.337060 GCACGAAACAACCGCCCC 62.337 66.667 0.00 0.00 0.00 5.80
305 306 4.337060 GGCACGAAACAACCGCCC 62.337 66.667 0.00 0.00 36.73 6.13
327 328 2.360225 TAAACTTTCCGCCGGCCC 60.360 61.111 23.46 0.00 0.00 5.80
328 329 3.047718 GCTAAACTTTCCGCCGGCC 62.048 63.158 23.46 2.84 0.00 6.13
329 330 2.483745 GCTAAACTTTCCGCCGGC 59.516 61.111 19.07 19.07 0.00 6.13
330 331 3.184206 GGCTAAACTTTCCGCCGG 58.816 61.111 0.00 0.00 32.22 6.13
332 333 3.047718 GCCGGCTAAACTTTCCGCC 62.048 63.158 22.15 5.17 41.68 6.13
333 334 2.483745 GCCGGCTAAACTTTCCGC 59.516 61.111 22.15 0.00 41.68 5.54
334 335 1.644786 CTGGCCGGCTAAACTTTCCG 61.645 60.000 28.56 0.93 42.58 4.30
335 336 1.934220 GCTGGCCGGCTAAACTTTCC 61.934 60.000 30.01 6.48 0.00 3.13
336 337 1.506718 GCTGGCCGGCTAAACTTTC 59.493 57.895 30.01 7.32 0.00 2.62
337 338 1.977009 GGCTGGCCGGCTAAACTTT 60.977 57.895 34.76 0.00 34.85 2.66
338 339 2.361230 GGCTGGCCGGCTAAACTT 60.361 61.111 34.76 0.00 34.85 2.66
351 352 2.070654 AAAACGTTTGGAGCCGGCTG 62.071 55.000 38.41 21.38 0.00 4.85
352 353 1.388837 AAAAACGTTTGGAGCCGGCT 61.389 50.000 33.48 33.48 0.00 5.52
353 354 0.937699 GAAAAACGTTTGGAGCCGGC 60.938 55.000 21.89 21.89 0.00 6.13
354 355 0.666374 AGAAAAACGTTTGGAGCCGG 59.334 50.000 15.46 0.00 0.00 6.13
355 356 3.612472 TTAGAAAAACGTTTGGAGCCG 57.388 42.857 15.46 0.00 0.00 5.52
356 357 4.505191 GGTTTTAGAAAAACGTTTGGAGCC 59.495 41.667 15.46 5.76 0.00 4.70
357 358 5.103687 TGGTTTTAGAAAAACGTTTGGAGC 58.896 37.500 15.46 4.56 38.42 4.70
358 359 6.237728 GCTTGGTTTTAGAAAAACGTTTGGAG 60.238 38.462 15.46 1.14 38.42 3.86
359 360 5.577554 GCTTGGTTTTAGAAAAACGTTTGGA 59.422 36.000 15.46 0.00 38.42 3.53
360 361 5.220510 GGCTTGGTTTTAGAAAAACGTTTGG 60.221 40.000 15.46 0.00 38.42 3.28
361 362 5.220510 GGGCTTGGTTTTAGAAAAACGTTTG 60.221 40.000 15.46 0.00 38.42 2.93
362 363 4.871557 GGGCTTGGTTTTAGAAAAACGTTT 59.128 37.500 7.96 7.96 38.42 3.60
363 364 4.435425 GGGCTTGGTTTTAGAAAAACGTT 58.565 39.130 0.00 0.00 38.42 3.99
364 365 3.489568 CGGGCTTGGTTTTAGAAAAACGT 60.490 43.478 8.66 0.00 38.42 3.99
365 366 3.047093 CGGGCTTGGTTTTAGAAAAACG 58.953 45.455 8.66 0.00 38.42 3.60
366 367 2.798283 GCGGGCTTGGTTTTAGAAAAAC 59.202 45.455 6.70 6.70 36.16 2.43
367 368 2.544069 CGCGGGCTTGGTTTTAGAAAAA 60.544 45.455 0.00 0.00 0.00 1.94
368 369 1.001158 CGCGGGCTTGGTTTTAGAAAA 60.001 47.619 0.00 0.00 0.00 2.29
369 370 0.594110 CGCGGGCTTGGTTTTAGAAA 59.406 50.000 0.00 0.00 0.00 2.52
370 371 0.535553 ACGCGGGCTTGGTTTTAGAA 60.536 50.000 12.47 0.00 0.00 2.10
371 372 1.071814 ACGCGGGCTTGGTTTTAGA 59.928 52.632 12.47 0.00 0.00 2.10
372 373 1.209127 CACGCGGGCTTGGTTTTAG 59.791 57.895 12.47 0.00 0.00 1.85
373 374 2.262303 CCACGCGGGCTTGGTTTTA 61.262 57.895 12.47 0.00 31.60 1.52
374 375 3.601685 CCACGCGGGCTTGGTTTT 61.602 61.111 12.47 0.00 31.60 2.43
375 376 4.887190 ACCACGCGGGCTTGGTTT 62.887 61.111 15.25 0.00 44.67 3.27
417 418 3.929094 TGTAAACCCGTGTTTAGGCTAG 58.071 45.455 3.31 0.00 45.16 3.42
421 422 4.201744 CGCTAATGTAAACCCGTGTTTAGG 60.202 45.833 3.31 0.00 45.16 2.69
464 465 2.329379 GGACGATTCGGTCATATGAGC 58.671 52.381 22.31 22.31 38.70 4.26
465 466 2.585845 CGGACGATTCGGTCATATGAG 58.414 52.381 5.42 0.00 38.70 2.90
466 467 1.335597 GCGGACGATTCGGTCATATGA 60.336 52.381 11.29 0.00 38.70 2.15
471 476 2.126228 GTGCGGACGATTCGGTCA 60.126 61.111 11.29 0.00 38.70 4.02
494 499 1.481871 GAGTTCAGGTCCCCACGATA 58.518 55.000 0.00 0.00 0.00 2.92
511 517 2.472695 TGATCAACTGGGAAACGGAG 57.527 50.000 0.00 0.00 0.00 4.63
518 524 2.614481 GGCGTAGTTTGATCAACTGGGA 60.614 50.000 7.89 0.00 45.98 4.37
553 559 5.364778 TGGACATTATATAGTGCGCTTTGT 58.635 37.500 9.73 0.00 0.00 2.83
573 579 7.238710 AGGGCTTTTCTATCTAACTTTTTGGA 58.761 34.615 0.00 0.00 0.00 3.53
609 615 4.170292 AGTGCTCACAAAATGATTGCTC 57.830 40.909 2.63 0.00 36.48 4.26
632 639 7.041635 TGTATAATATCCTCGTTTGGTTCGA 57.958 36.000 0.00 0.00 35.96 3.71
767 775 2.961721 CACGCTGCAGTGACACGT 60.962 61.111 32.90 21.04 44.43 4.49
880 888 0.401356 TGGAAATGCTCTGGTGCTCA 59.599 50.000 0.00 0.00 0.00 4.26
921 929 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
922 930 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
934 942 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
935 943 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
936 944 5.598005 AGAAGAGAGAGAGAGAGAGAGAGAG 59.402 48.000 0.00 0.00 0.00 3.20
937 945 5.523588 AGAAGAGAGAGAGAGAGAGAGAGA 58.476 45.833 0.00 0.00 0.00 3.10
938 946 5.221422 GGAGAAGAGAGAGAGAGAGAGAGAG 60.221 52.000 0.00 0.00 0.00 3.20
939 947 4.651503 GGAGAAGAGAGAGAGAGAGAGAGA 59.348 50.000 0.00 0.00 0.00 3.10
940 948 4.202305 GGGAGAAGAGAGAGAGAGAGAGAG 60.202 54.167 0.00 0.00 0.00 3.20
941 949 3.711704 GGGAGAAGAGAGAGAGAGAGAGA 59.288 52.174 0.00 0.00 0.00 3.10
942 950 3.493350 CGGGAGAAGAGAGAGAGAGAGAG 60.493 56.522 0.00 0.00 0.00 3.20
943 951 2.434336 CGGGAGAAGAGAGAGAGAGAGA 59.566 54.545 0.00 0.00 0.00 3.10
944 952 2.838736 CGGGAGAAGAGAGAGAGAGAG 58.161 57.143 0.00 0.00 0.00 3.20
945 953 1.134220 GCGGGAGAAGAGAGAGAGAGA 60.134 57.143 0.00 0.00 0.00 3.10
946 954 1.308998 GCGGGAGAAGAGAGAGAGAG 58.691 60.000 0.00 0.00 0.00 3.20
947 955 0.106918 GGCGGGAGAAGAGAGAGAGA 60.107 60.000 0.00 0.00 0.00 3.10
948 956 1.106944 GGGCGGGAGAAGAGAGAGAG 61.107 65.000 0.00 0.00 0.00 3.20
949 957 1.076632 GGGCGGGAGAAGAGAGAGA 60.077 63.158 0.00 0.00 0.00 3.10
950 958 2.485795 CGGGCGGGAGAAGAGAGAG 61.486 68.421 0.00 0.00 0.00 3.20
951 959 2.440430 CGGGCGGGAGAAGAGAGA 60.440 66.667 0.00 0.00 0.00 3.10
952 960 2.756283 ACGGGCGGGAGAAGAGAG 60.756 66.667 0.00 0.00 0.00 3.20
953 961 3.068691 CACGGGCGGGAGAAGAGA 61.069 66.667 0.00 0.00 0.00 3.10
954 962 3.358076 GACACGGGCGGGAGAAGAG 62.358 68.421 0.00 0.00 0.00 2.85
1037 1055 2.114625 TCTCTCCACCACGACCGT 59.885 61.111 0.00 0.00 0.00 4.83
1042 1060 4.436998 GGCGGTCTCTCCACCACG 62.437 72.222 0.00 0.00 38.25 4.94
1228 1258 2.415010 CACGCCTCTCCCTCATCG 59.585 66.667 0.00 0.00 0.00 3.84
1230 1260 1.305297 TCACACGCCTCTCCCTCAT 60.305 57.895 0.00 0.00 0.00 2.90
1334 1424 1.814429 TGTTTCCAGGAGGAGAACCA 58.186 50.000 0.12 0.00 46.74 3.67
1462 1611 3.695830 TTTGACCTCGCTTCCTTACAT 57.304 42.857 0.00 0.00 0.00 2.29
1470 1619 3.627395 TGGATGTATTTGACCTCGCTT 57.373 42.857 0.00 0.00 0.00 4.68
1473 1622 7.312154 TCAAATTTTGGATGTATTTGACCTCG 58.688 34.615 9.18 0.00 41.07 4.63
1648 1802 3.159486 GCAAGCAATGCGAAAGAAAAC 57.841 42.857 0.00 0.00 46.87 2.43
1798 1952 5.182001 GCCATCGATAACATATTTTGCCTCT 59.818 40.000 0.00 0.00 0.00 3.69
1949 2108 3.973206 TCATATTGGTCCACGTTCACT 57.027 42.857 0.00 0.00 0.00 3.41
1952 2111 5.172934 TGTAGTTCATATTGGTCCACGTTC 58.827 41.667 0.00 0.00 0.00 3.95
1962 2121 8.691727 GCGAGTAACATACTGTAGTTCATATTG 58.308 37.037 0.00 0.00 39.59 1.90
1963 2122 8.410912 TGCGAGTAACATACTGTAGTTCATATT 58.589 33.333 0.00 0.00 39.59 1.28
1964 2123 7.937649 TGCGAGTAACATACTGTAGTTCATAT 58.062 34.615 0.00 0.00 39.59 1.78
1965 2124 7.324354 TGCGAGTAACATACTGTAGTTCATA 57.676 36.000 0.00 0.00 39.59 2.15
1966 2125 6.203808 TGCGAGTAACATACTGTAGTTCAT 57.796 37.500 0.00 0.00 39.59 2.57
1967 2126 5.632244 TGCGAGTAACATACTGTAGTTCA 57.368 39.130 0.00 0.00 39.59 3.18
1968 2127 5.051641 GCATGCGAGTAACATACTGTAGTTC 60.052 44.000 0.00 1.56 39.59 3.01
1969 2128 4.804139 GCATGCGAGTAACATACTGTAGTT 59.196 41.667 0.00 1.54 39.59 2.24
1971 2130 3.736252 GGCATGCGAGTAACATACTGTAG 59.264 47.826 12.44 0.00 39.59 2.74
1973 2132 2.168521 AGGCATGCGAGTAACATACTGT 59.831 45.455 12.44 0.00 39.59 3.55
1974 2133 2.826428 AGGCATGCGAGTAACATACTG 58.174 47.619 12.44 0.00 39.59 2.74
1976 2135 3.002348 GGAAAGGCATGCGAGTAACATAC 59.998 47.826 12.44 0.00 0.00 2.39
1977 2136 3.118408 AGGAAAGGCATGCGAGTAACATA 60.118 43.478 12.44 0.00 0.00 2.29
1978 2137 2.017049 GGAAAGGCATGCGAGTAACAT 58.983 47.619 12.44 0.00 0.00 2.71
1979 2138 1.003118 AGGAAAGGCATGCGAGTAACA 59.997 47.619 12.44 0.00 0.00 2.41
1986 2746 3.506108 CCAGAGGAAAGGCATGCG 58.494 61.111 12.44 0.00 0.00 4.73
2183 2944 5.803020 ACCTTTCAGTGCGAGAATAAATC 57.197 39.130 0.00 0.00 0.00 2.17
2267 3028 6.531503 TTAACCTGAACATTCAACCAAACA 57.468 33.333 0.00 0.00 36.64 2.83
2343 3104 3.543536 GATGCAGAGGCCGGGGATC 62.544 68.421 2.18 9.34 40.13 3.36
2344 3105 3.564218 GATGCAGAGGCCGGGGAT 61.564 66.667 2.18 0.00 40.13 3.85
2346 3107 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2348 3109 4.478371 TGCTGATGCAGAGGCCGG 62.478 66.667 0.00 0.00 45.31 6.13
2359 3120 1.162698 GCCGTATGCATCATGCTGAT 58.837 50.000 11.84 0.00 45.31 2.90
2360 3121 0.886043 GGCCGTATGCATCATGCTGA 60.886 55.000 11.84 0.00 45.31 4.26
2361 3122 1.167781 TGGCCGTATGCATCATGCTG 61.168 55.000 11.84 0.00 45.31 4.41
2362 3123 0.251033 ATGGCCGTATGCATCATGCT 60.251 50.000 11.84 0.00 45.31 3.79
2363 3124 1.452110 TATGGCCGTATGCATCATGC 58.548 50.000 0.19 1.35 45.29 4.06
2364 3125 4.707030 AATTATGGCCGTATGCATCATG 57.293 40.909 0.19 0.00 43.89 3.07
2365 3126 5.472148 CAAAATTATGGCCGTATGCATCAT 58.528 37.500 0.19 2.41 43.89 2.45
2366 3127 4.795635 GCAAAATTATGGCCGTATGCATCA 60.796 41.667 19.10 0.00 43.89 3.07
2367 3128 3.674753 GCAAAATTATGGCCGTATGCATC 59.325 43.478 19.10 0.00 43.89 3.91
2368 3129 3.554752 GGCAAAATTATGGCCGTATGCAT 60.555 43.478 23.31 3.79 43.89 3.96
2369 3130 2.223923 GGCAAAATTATGGCCGTATGCA 60.224 45.455 23.31 4.24 43.89 3.96
2370 3131 2.403259 GGCAAAATTATGGCCGTATGC 58.597 47.619 16.73 16.73 39.79 3.14
2376 3137 4.751600 GCAGATAAAGGCAAAATTATGGCC 59.248 41.667 0.00 0.00 46.33 5.36
2377 3138 5.604565 AGCAGATAAAGGCAAAATTATGGC 58.395 37.500 0.00 0.00 45.57 4.40
2378 3139 7.864379 CAGTAGCAGATAAAGGCAAAATTATGG 59.136 37.037 0.00 0.00 0.00 2.74
2379 3140 8.408601 ACAGTAGCAGATAAAGGCAAAATTATG 58.591 33.333 0.00 0.00 0.00 1.90
2380 3141 8.525290 ACAGTAGCAGATAAAGGCAAAATTAT 57.475 30.769 0.00 0.00 0.00 1.28
2381 3142 7.938140 ACAGTAGCAGATAAAGGCAAAATTA 57.062 32.000 0.00 0.00 0.00 1.40
2407 3168 4.833390 AGGGATTCGACAAAAGAAGTAGG 58.167 43.478 0.00 0.00 0.00 3.18
2443 3204 1.731709 TGTCACGCTGCACATATGAAC 59.268 47.619 10.38 1.10 0.00 3.18
2722 3486 0.179100 CGTCACTGGCCAGATGTAGG 60.179 60.000 39.19 20.13 0.00 3.18
2757 3521 2.489722 GGACAAAAGATGTTGGAGGCTC 59.510 50.000 5.78 5.78 44.12 4.70
2977 3751 9.201989 TGTACTCAATGATTTCATAGGTACTCT 57.798 33.333 19.33 0.00 41.75 3.24
3047 3821 6.357367 TCCAGGTTAAGATCTTATTTCAGGC 58.643 40.000 15.82 1.88 0.00 4.85
3226 4008 3.362986 GCGCAGGTATCACATTATTGTCG 60.363 47.826 0.30 0.00 32.34 4.35
3242 4024 1.717194 AAAAGATGCAATTGCGCAGG 58.283 45.000 24.58 5.75 46.99 4.85
3245 4027 4.607557 GCATGATAAAAGATGCAATTGCGC 60.608 41.667 24.58 18.65 43.75 6.09
3246 4028 4.084745 GGCATGATAAAAGATGCAATTGCG 60.085 41.667 24.58 7.28 45.70 4.85
3371 4181 8.629158 AGTGATTCACAAGCAAACTTAAATGTA 58.371 29.630 18.57 0.00 36.74 2.29
3374 4184 7.945134 AGAGTGATTCACAAGCAAACTTAAAT 58.055 30.769 18.57 0.00 36.74 1.40
3468 4278 8.970691 ATGTAATGTGTTAAAGAGAAATGTGC 57.029 30.769 0.00 0.00 0.00 4.57
3488 4298 6.377146 GGAAGGCAAGTTTAATGAGGATGTAA 59.623 38.462 0.00 0.00 0.00 2.41
3520 4331 4.382685 CGGCTGAAGGTCTAAAGTTGGATA 60.383 45.833 0.00 0.00 0.00 2.59
3546 4357 5.470098 TGTACAAAGTCCAATCTTTCAGCTC 59.530 40.000 0.00 0.00 35.77 4.09
3550 4361 8.006298 ACATTTGTACAAAGTCCAATCTTTCA 57.994 30.769 24.22 0.00 35.77 2.69
3598 4409 7.715657 AGTGTTCTGCATTTTCTTAAACATCA 58.284 30.769 0.00 0.00 0.00 3.07
3683 4496 3.876309 AAACAGCCTGAAGGGTAGAAA 57.124 42.857 0.00 0.00 45.47 2.52
3795 4608 8.527810 TGGAACAATTAAACAGAGTTGAACTTT 58.472 29.630 0.00 0.00 31.92 2.66
3855 4668 1.915489 TCTCCACTGGCACCATTATGT 59.085 47.619 0.00 0.00 0.00 2.29
3944 4757 4.956085 TCGATCTTTTGTCACTTGAAGGA 58.044 39.130 0.00 0.00 0.00 3.36
3964 4777 5.122239 TGGAACTCATGCAAATAAGAACTCG 59.878 40.000 0.00 0.00 0.00 4.18
4057 4870 1.269703 ATCCCTGGTGTACCCCGAAC 61.270 60.000 0.00 0.00 34.29 3.95
4161 4977 7.973388 TCAACTTCCACAGAAAACAACATTAAG 59.027 33.333 0.00 0.00 0.00 1.85
4232 5048 8.993424 AGGTATGAGGACACTACAAGAATTTAT 58.007 33.333 0.00 0.00 0.00 1.40
4356 5172 4.832823 TCCTTTCCAAATTCCAGAAAGTCC 59.167 41.667 17.02 0.00 43.14 3.85
4370 5186 5.012239 CAGACAAATCCTGATCCTTTCCAA 58.988 41.667 0.00 0.00 33.65 3.53
4505 5321 6.859112 ATGCTCCTTAAACTAGAACTCTCA 57.141 37.500 0.00 0.00 0.00 3.27
4586 5714 4.883083 TGCCGATAAGAGAATACATGGTC 58.117 43.478 0.00 0.00 0.00 4.02
4604 5732 6.990341 TCATGATTATCATATTCCTTGCCG 57.010 37.500 7.44 0.00 34.28 5.69
4619 5747 5.220510 GCGTGTTCGGTACATTTCATGATTA 60.221 40.000 0.00 0.00 39.39 1.75
4641 5769 2.623186 GCTATTTGCCGACGTTTTGCG 61.623 52.381 0.00 0.00 40.41 4.85
4817 5946 4.783227 AGGGACTCCACTGATTAAAGCTTA 59.217 41.667 0.00 0.00 34.83 3.09
4992 6123 4.142204 TGCTTCAATTTCACAAGAACAGCA 60.142 37.500 0.00 0.00 32.39 4.41
5053 6184 0.322816 GAAGCAGACCCAATGCCTGA 60.323 55.000 0.00 0.00 44.97 3.86
5065 6196 4.100963 TGTTAGTGAGGAAACAGAAGCAGA 59.899 41.667 0.00 0.00 32.11 4.26
5066 6197 4.380531 TGTTAGTGAGGAAACAGAAGCAG 58.619 43.478 0.00 0.00 32.11 4.24
5075 6206 7.016268 ACTCCTTAACATCTGTTAGTGAGGAAA 59.984 37.037 21.87 7.55 41.11 3.13
5086 6217 4.973168 TCAGCAAACTCCTTAACATCTGT 58.027 39.130 0.00 0.00 0.00 3.41
5106 6237 1.269723 CTGTCGACAACTACAGCCTCA 59.730 52.381 20.49 0.00 36.96 3.86
5154 6285 3.509575 GGCTGGTGTGGTTGATGATAAAA 59.490 43.478 0.00 0.00 0.00 1.52
5169 6300 2.486982 CAGATCTGTCAAAAGGCTGGTG 59.513 50.000 14.95 0.00 0.00 4.17
5366 6497 4.070581 ACACGAATGAAAGATCGCAAAG 57.929 40.909 0.00 0.00 42.61 2.77
5496 6672 9.567776 TCAAATACTGTCACTTATCCAAAAGAA 57.432 29.630 0.00 0.00 0.00 2.52
5532 6708 5.105228 ACAAGAATTCCCTGCCAATACAATG 60.105 40.000 0.65 0.00 0.00 2.82
5613 6790 2.346803 TGATTCTTGAGTAGTTGCGCC 58.653 47.619 4.18 0.00 0.00 6.53
5760 6937 4.301505 GCAGAAGGCGATGAACCA 57.698 55.556 0.00 0.00 0.00 3.67
5786 6963 1.293498 CAGGTGCTTACAGCCGTCT 59.707 57.895 0.00 0.00 45.66 4.18
5823 7000 3.216800 TCAAAGCAGAAGAGTTGCACAT 58.783 40.909 0.00 0.00 43.92 3.21
5892 7071 1.566018 GCTTGCGCAAGTCTAACGGT 61.566 55.000 41.19 0.00 40.45 4.83
5935 7118 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5937 7120 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5939 7122 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5947 7130 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5948 7131 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5949 7132 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5952 7135 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5953 7136 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5954 7137 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5955 7138 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5956 7139 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5957 7140 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5958 7141 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5959 7142 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5960 7143 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5961 7144 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5962 7145 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5963 7146 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5964 7147 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5965 7148 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5966 7149 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
5967 7150 3.809279 AGATATGTGTGTGTGTGTGTGTG 59.191 43.478 0.00 0.00 0.00 3.82
5968 7151 3.809279 CAGATATGTGTGTGTGTGTGTGT 59.191 43.478 0.00 0.00 0.00 3.72
5969 7152 3.187022 CCAGATATGTGTGTGTGTGTGTG 59.813 47.826 0.00 0.00 0.00 3.82
5970 7153 3.402110 CCAGATATGTGTGTGTGTGTGT 58.598 45.455 0.00 0.00 0.00 3.72
5971 7154 2.160219 GCCAGATATGTGTGTGTGTGTG 59.840 50.000 0.00 0.00 0.00 3.82
5972 7155 2.426522 GCCAGATATGTGTGTGTGTGT 58.573 47.619 0.00 0.00 0.00 3.72
5973 7156 1.394572 CGCCAGATATGTGTGTGTGTG 59.605 52.381 0.00 0.00 0.00 3.82
5974 7157 1.001974 ACGCCAGATATGTGTGTGTGT 59.998 47.619 0.00 0.00 0.00 3.72
5975 7158 1.725641 ACGCCAGATATGTGTGTGTG 58.274 50.000 0.00 0.00 0.00 3.82
5989 7172 0.032952 AGCTACAGAAACGAACGCCA 59.967 50.000 0.00 0.00 0.00 5.69
6043 7226 6.320418 AGTGATAAACCGAACCTTTTCAGTTT 59.680 34.615 4.60 4.60 42.47 2.66
6046 7229 5.701290 AGAGTGATAAACCGAACCTTTTCAG 59.299 40.000 0.00 0.00 0.00 3.02
6051 7234 4.222145 TGCTAGAGTGATAAACCGAACCTT 59.778 41.667 0.00 0.00 0.00 3.50
6078 7262 6.341316 ACTGTATGAAATATCGAGCACTTGT 58.659 36.000 0.00 0.00 0.00 3.16
6127 7311 3.328382 TGGTAAGACAACATCTTCCCG 57.672 47.619 0.00 0.00 44.99 5.14
6174 7364 4.379793 CGCAACACATTCTTTTCAGCTAAC 59.620 41.667 0.00 0.00 0.00 2.34
6216 7406 4.080356 TGGCTGAACCTAGAAATATGCACT 60.080 41.667 0.00 0.00 40.22 4.40
6231 7421 3.437049 GTCTTACACCTGAATGGCTGAAC 59.563 47.826 0.00 0.00 40.22 3.18
6235 7425 2.789409 GGTCTTACACCTGAATGGCT 57.211 50.000 0.00 0.00 42.84 4.75
6253 7443 4.330074 CAGACTTATTTAACACTGCCGAGG 59.670 45.833 0.00 0.00 0.00 4.63
6291 7481 0.387239 GCACACATGTTTCTTCGGCC 60.387 55.000 0.00 0.00 0.00 6.13
6295 7485 2.030805 GGTCCTGCACACATGTTTCTTC 60.031 50.000 0.00 0.00 0.00 2.87
6313 7503 0.819259 TGCCTGCACTTGTCTTGGTC 60.819 55.000 0.00 0.00 0.00 4.02
6316 7506 1.285023 GCTGCCTGCACTTGTCTTG 59.715 57.895 0.00 0.00 42.31 3.02
6326 7561 3.608707 CGAATAATCAGATTGCTGCCTGC 60.609 47.826 5.85 0.00 42.01 4.85
6327 7562 3.058432 CCGAATAATCAGATTGCTGCCTG 60.058 47.826 5.85 0.00 42.01 4.85
6334 7569 5.907197 ACTAACGCCGAATAATCAGATTG 57.093 39.130 5.85 0.00 0.00 2.67
6335 7570 7.152645 ACATACTAACGCCGAATAATCAGATT 58.847 34.615 0.20 0.20 0.00 2.40
6339 7574 8.645730 TTTTACATACTAACGCCGAATAATCA 57.354 30.769 0.00 0.00 0.00 2.57
6345 7580 5.005971 GCTGATTTTACATACTAACGCCGAA 59.994 40.000 0.00 0.00 0.00 4.30
6347 7582 4.269123 TGCTGATTTTACATACTAACGCCG 59.731 41.667 0.00 0.00 0.00 6.46
6352 7587 9.494271 GGATCTCATGCTGATTTTACATACTAA 57.506 33.333 0.00 0.00 0.00 2.24
6357 7592 5.768662 CAGGGATCTCATGCTGATTTTACAT 59.231 40.000 0.00 0.00 0.00 2.29
6371 7606 2.631384 TGGTTTTCTCCAGGGATCTCA 58.369 47.619 0.00 0.00 33.19 3.27
6380 7615 1.075601 ATCCTGGCTGGTTTTCTCCA 58.924 50.000 10.44 0.00 37.07 3.86
6381 7616 1.821136 CAATCCTGGCTGGTTTTCTCC 59.179 52.381 10.44 0.00 37.07 3.71
6449 7684 5.483937 TGGTTTGTAGGTGACACAGATATCT 59.516 40.000 8.08 0.00 37.96 1.98
6450 7685 5.730550 TGGTTTGTAGGTGACACAGATATC 58.269 41.667 8.08 0.00 37.96 1.63
6452 7687 5.755409 ATGGTTTGTAGGTGACACAGATA 57.245 39.130 8.08 0.00 37.96 1.98
6453 7688 4.640771 ATGGTTTGTAGGTGACACAGAT 57.359 40.909 8.08 0.00 37.96 2.90
6454 7689 4.431416 AATGGTTTGTAGGTGACACAGA 57.569 40.909 8.08 0.00 37.96 3.41
6456 7691 5.686753 ACTTAATGGTTTGTAGGTGACACA 58.313 37.500 8.08 0.00 37.96 3.72
6467 7702 1.807742 TCGCCCGAACTTAATGGTTTG 59.192 47.619 0.00 0.00 0.00 2.93
6477 7712 3.628280 GAGACGCTTCGCCCGAACT 62.628 63.158 0.00 0.00 0.00 3.01
6483 7718 0.306533 TTGTTTTGAGACGCTTCGCC 59.693 50.000 0.00 0.00 0.00 5.54
6486 7721 4.272748 AGGTAAGTTGTTTTGAGACGCTTC 59.727 41.667 0.00 0.00 0.00 3.86
6523 7759 1.286248 AATCGGGTACAGCCTCCTTT 58.714 50.000 0.00 0.00 37.43 3.11
6524 7760 2.170012 TAATCGGGTACAGCCTCCTT 57.830 50.000 0.00 0.00 37.43 3.36
6528 7764 2.958818 TGAGATAATCGGGTACAGCCT 58.041 47.619 0.00 0.00 37.43 4.58
6529 7765 3.673594 CGATGAGATAATCGGGTACAGCC 60.674 52.174 0.00 0.00 44.49 4.85
6544 7799 5.948758 AGAATATCATGCTAGGACGATGAGA 59.051 40.000 2.79 0.00 29.85 3.27
6546 7801 5.948758 AGAGAATATCATGCTAGGACGATGA 59.051 40.000 2.79 0.00 0.00 2.92
6551 7806 4.461081 ACCGAGAGAATATCATGCTAGGAC 59.539 45.833 0.00 0.00 0.00 3.85
6586 7999 2.218603 TCTTTGGAGAGTTTGTTCCGC 58.781 47.619 0.00 0.00 36.22 5.54
6599 8012 1.218047 CGGCGGTCTCATCTTTGGA 59.782 57.895 0.00 0.00 0.00 3.53
6609 8022 1.338136 ATCCAAGATTCCGGCGGTCT 61.338 55.000 27.32 19.55 0.00 3.85
6629 8042 2.909965 GGCGTTGGCTTGGGTGAA 60.910 61.111 0.00 0.00 39.81 3.18
6640 8053 1.411977 AGATGATCTCTCAGGGCGTTG 59.588 52.381 0.00 0.00 34.12 4.10
6642 8055 1.039068 CAGATGATCTCTCAGGGCGT 58.961 55.000 0.00 0.00 34.12 5.68
6643 8056 0.319727 GCAGATGATCTCTCAGGGCG 60.320 60.000 0.00 0.00 34.12 6.13
6647 8060 1.603425 CGGCTGCAGATGATCTCTCAG 60.603 57.143 20.43 13.77 34.12 3.35
6653 8066 1.960250 GAGCCGGCTGCAGATGATC 60.960 63.158 38.41 12.91 44.83 2.92
6682 8095 1.301677 GCCCTGCTGAACCTCTTTCG 61.302 60.000 0.00 0.00 36.97 3.46
6707 8120 2.741092 GACAGGCGGACAACCTCA 59.259 61.111 0.00 0.00 34.42 3.86
6712 8125 2.201708 TGTACGGACAGGCGGACAA 61.202 57.895 0.00 0.00 0.00 3.18
6731 8144 2.151502 TGACCATCTCTCTGTCTCCC 57.848 55.000 0.00 0.00 0.00 4.30
6738 8151 4.209538 CTGAGACTCATGACCATCTCTCT 58.790 47.826 20.00 2.84 38.72 3.10
6799 8212 1.369625 GTGGAGTATCTGCCGTTTGG 58.630 55.000 0.00 0.00 34.42 3.28
6806 8219 1.043673 ACCCTCGGTGGAGTATCTGC 61.044 60.000 0.00 0.00 38.70 4.26
6822 8235 3.787001 CTTCTGGGCCTCGGACCC 61.787 72.222 5.13 6.92 44.50 4.46
6823 8236 2.683933 TCTTCTGGGCCTCGGACC 60.684 66.667 4.53 0.00 45.60 4.46
6824 8237 2.896443 CTCTTCTGGGCCTCGGAC 59.104 66.667 4.53 0.00 0.00 4.79
6825 8238 3.077556 GCTCTTCTGGGCCTCGGA 61.078 66.667 4.53 0.00 0.00 4.55
6826 8239 3.382803 CTGCTCTTCTGGGCCTCGG 62.383 68.421 4.53 0.00 0.00 4.63
6827 8240 2.186384 CTGCTCTTCTGGGCCTCG 59.814 66.667 4.53 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.