Multiple sequence alignment - TraesCS7B01G146300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G146300 chr7B 100.000 8838 0 0 1 8838 190793296 190802133 0.000000e+00 16321.0
1 TraesCS7B01G146300 chr7B 93.842 341 20 1 1 340 125499736 125499396 6.120000e-141 512.0
2 TraesCS7B01G146300 chr7B 91.813 342 25 3 1 340 688155060 688155400 2.890000e-129 473.0
3 TraesCS7B01G146300 chr7B 91.026 156 11 2 6583 6735 129309834 129309989 3.230000e-49 207.0
4 TraesCS7B01G146300 chr7D 95.969 6301 177 39 340 6604 210400144 210393885 0.000000e+00 10157.0
5 TraesCS7B01G146300 chr7D 96.383 1631 37 11 6730 8352 210393884 210392268 0.000000e+00 2665.0
6 TraesCS7B01G146300 chr7D 89.116 294 20 5 664 954 210571224 210570940 1.090000e-93 355.0
7 TraesCS7B01G146300 chr7D 92.417 211 14 1 8417 8625 210392234 210392024 5.190000e-77 300.0
8 TraesCS7B01G146300 chr7D 84.259 216 14 6 8570 8784 210392024 210391828 9.050000e-45 193.0
9 TraesCS7B01G146300 chr7A 93.401 3137 131 32 340 3438 222945545 222942447 0.000000e+00 4577.0
10 TraesCS7B01G146300 chr7A 95.853 1712 56 7 3557 5260 222941120 222939416 0.000000e+00 2754.0
11 TraesCS7B01G146300 chr7A 95.187 1683 65 10 6730 8404 222937728 222936054 0.000000e+00 2645.0
12 TraesCS7B01G146300 chr7A 94.498 1345 59 6 5260 6602 222939062 222937731 0.000000e+00 2060.0
13 TraesCS7B01G146300 chr7A 92.434 304 16 3 3557 3853 222941735 222941432 2.280000e-115 427.0
14 TraesCS7B01G146300 chr7A 87.963 324 28 9 8417 8740 222934899 222934587 1.080000e-98 372.0
15 TraesCS7B01G146300 chr7A 90.278 288 17 4 668 954 223071641 223071364 5.040000e-97 366.0
16 TraesCS7B01G146300 chr7A 88.889 288 20 6 668 954 223016730 223016454 2.360000e-90 344.0
17 TraesCS7B01G146300 chr7A 96.522 115 4 0 3435 3549 222942325 222942211 3.260000e-44 191.0
18 TraesCS7B01G146300 chrUn 92.733 344 22 3 1 343 23143899 23143558 2.220000e-135 494.0
19 TraesCS7B01G146300 chrUn 91.789 341 27 1 1 340 41792927 41792587 2.890000e-129 473.0
20 TraesCS7B01G146300 chr2B 92.669 341 23 2 1 340 793482332 793481993 2.870000e-134 490.0
21 TraesCS7B01G146300 chr2B 92.669 341 22 3 1 340 759682088 759682426 1.030000e-133 488.0
22 TraesCS7B01G146300 chr2B 90.551 127 11 1 3557 3682 423002355 423002481 5.490000e-37 167.0
23 TraesCS7B01G146300 chr3B 92.082 341 26 1 1 340 792633468 792633128 6.210000e-131 479.0
24 TraesCS7B01G146300 chr3B 91.570 344 27 2 1 343 746327971 746327629 2.890000e-129 473.0
25 TraesCS7B01G146300 chr3B 96.241 133 5 0 6596 6728 155655784 155655652 1.490000e-52 219.0
26 TraesCS7B01G146300 chr3B 89.349 169 14 4 6562 6728 692220524 692220690 8.990000e-50 209.0
27 TraesCS7B01G146300 chr3B 90.385 156 11 3 6573 6728 578395746 578395595 1.500000e-47 202.0
28 TraesCS7B01G146300 chr3B 92.157 51 4 0 6505 6555 822193973 822193923 1.230000e-08 73.1
29 TraesCS7B01G146300 chr6B 92.082 341 24 3 1 340 422692633 422692971 2.230000e-130 477.0
30 TraesCS7B01G146300 chr5B 95.588 136 6 0 6600 6735 456281612 456281477 1.490000e-52 219.0
31 TraesCS7B01G146300 chr2D 96.947 131 3 1 6599 6728 619720676 619720546 1.490000e-52 219.0
32 TraesCS7B01G146300 chr1A 94.366 142 5 3 6596 6735 203071047 203070907 1.930000e-51 215.0
33 TraesCS7B01G146300 chr1A 88.806 134 14 1 3550 3682 225509833 225509700 7.100000e-36 163.0
34 TraesCS7B01G146300 chr1A 88.976 127 12 2 3557 3682 330726289 330726414 1.190000e-33 156.0
35 TraesCS7B01G146300 chr3A 93.662 142 8 1 6591 6732 328931108 328930968 2.500000e-50 211.0
36 TraesCS7B01G146300 chr3A 94.118 51 2 1 6507 6556 12979378 12979428 9.510000e-10 76.8
37 TraesCS7B01G146300 chr6A 92.617 149 6 4 6587 6731 554386274 554386127 8.990000e-50 209.0
38 TraesCS7B01G146300 chr1B 89.764 127 12 1 3557 3682 249629908 249630034 2.550000e-35 161.0
39 TraesCS7B01G146300 chr1B 95.833 48 2 0 6507 6554 493871919 493871872 2.650000e-10 78.7
40 TraesCS7B01G146300 chr5A 88.976 127 13 1 3557 3682 286734882 286734756 1.190000e-33 156.0
41 TraesCS7B01G146300 chr1D 88.618 123 14 0 3560 3682 169060589 169060467 5.530000e-32 150.0
42 TraesCS7B01G146300 chr5D 95.745 47 2 0 6507 6553 324411882 324411836 9.510000e-10 76.8
43 TraesCS7B01G146300 chr5D 95.652 46 2 0 6507 6552 542700735 542700690 3.420000e-09 75.0
44 TraesCS7B01G146300 chr3D 92.157 51 3 1 6507 6556 7258075 7258025 4.430000e-08 71.3
45 TraesCS7B01G146300 chr3D 90.566 53 5 0 6507 6559 30004965 30005017 4.430000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G146300 chr7B 190793296 190802133 8837 False 16321.000000 16321 100.000 1 8838 1 chr7B.!!$F2 8837
1 TraesCS7B01G146300 chr7D 210391828 210400144 8316 True 3328.750000 10157 92.257 340 8784 4 chr7D.!!$R2 8444
2 TraesCS7B01G146300 chr7A 222934587 222945545 10958 True 1860.857143 4577 93.694 340 8740 7 chr7A.!!$R3 8400

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
301 302 0.037790 GCACTCTCAGGACGCTCTTT 60.038 55.000 0.00 0.00 0.00 2.52 F
586 598 0.179032 TGTTGCTTGATCCACCACGT 60.179 50.000 0.00 0.00 0.00 4.49 F
1424 1452 0.108472 GGGGCCTGTAGTTGTACGAC 60.108 60.000 0.84 4.97 30.95 4.34 F
1675 1703 0.319211 TGATCACGCTCGGTTTCGTT 60.319 50.000 0.00 0.00 36.73 3.85 F
1780 1820 0.459489 TTGTGTTTGTTGCTGGGCTC 59.541 50.000 0.00 0.00 0.00 4.70 F
1782 1822 1.133945 TGTGTTTGTTGCTGGGCTCTA 60.134 47.619 0.00 0.00 0.00 2.43 F
2840 2888 1.209261 TGCAACTGTGAAGAGGTGACA 59.791 47.619 0.00 0.00 31.73 3.58 F
3761 5026 3.630312 GGTCTAAGTTTGTGGCTGAAACA 59.370 43.478 12.43 0.00 36.03 2.83 F
4237 5502 1.004044 ACAGCAAACCAGCAGCTCTAT 59.996 47.619 0.00 0.00 36.26 1.98 F
5316 6937 1.348064 TGTCAGTAGGAACACTGGGG 58.652 55.000 3.61 0.00 44.98 4.96 F
6040 7661 1.708993 TTGCTGCCACCAAGGACTCT 61.709 55.000 0.00 0.00 41.22 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 1431 0.322322 CGTACAACTACAGGCCCCAA 59.678 55.000 0.00 0.00 0.00 4.12 R
1475 1503 0.454600 TGAGACCTAACCGCGTCATC 59.545 55.000 4.92 0.00 0.00 2.92 R
2694 2741 1.313772 ACAATAAACTGCGCACACCA 58.686 45.000 5.66 0.00 0.00 4.17 R
3103 3152 2.782163 CGTTTGATCTCTTCTCGCGTA 58.218 47.619 5.77 0.00 0.00 4.42 R
3204 3253 4.875544 TCGAAGTGGAAAGTTTCTGTTG 57.124 40.909 15.05 3.24 0.00 3.33 R
3730 4995 6.098266 AGCCACAAACTTAGACCTGAATTTTT 59.902 34.615 0.00 0.00 0.00 1.94 R
4237 5502 0.179073 GCGCTTAGAAGATGGCTCCA 60.179 55.000 0.00 0.00 0.00 3.86 R
5348 6969 0.454957 CGCATGTACCAGCAAGTTGC 60.455 55.000 20.44 20.44 45.46 4.17 R
6214 7836 1.216977 CCACAGCCACCATGCAATG 59.783 57.895 0.00 0.00 46.21 2.82 R
6604 8227 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
8005 9636 0.680061 AGTCCGAAACCAGTCCTCAC 59.320 55.000 0.00 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 7.887996 TTTGATTTATGTGATGAAACAAGCC 57.112 32.000 0.00 0.00 32.81 4.35
60 61 5.639757 TGATTTATGTGATGAAACAAGCCG 58.360 37.500 0.00 0.00 32.81 5.52
61 62 5.414144 TGATTTATGTGATGAAACAAGCCGA 59.586 36.000 0.00 0.00 32.81 5.54
62 63 5.697473 TTTATGTGATGAAACAAGCCGAA 57.303 34.783 0.00 0.00 32.81 4.30
63 64 5.697473 TTATGTGATGAAACAAGCCGAAA 57.303 34.783 0.00 0.00 32.81 3.46
64 65 4.582701 ATGTGATGAAACAAGCCGAAAA 57.417 36.364 0.00 0.00 32.81 2.29
65 66 3.701241 TGTGATGAAACAAGCCGAAAAC 58.299 40.909 0.00 0.00 0.00 2.43
66 67 3.129462 TGTGATGAAACAAGCCGAAAACA 59.871 39.130 0.00 0.00 0.00 2.83
67 68 3.485743 GTGATGAAACAAGCCGAAAACAC 59.514 43.478 0.00 0.00 0.00 3.32
68 69 2.181426 TGAAACAAGCCGAAAACACG 57.819 45.000 0.00 0.00 0.00 4.49
69 70 0.843872 GAAACAAGCCGAAAACACGC 59.156 50.000 0.00 0.00 0.00 5.34
70 71 0.526739 AAACAAGCCGAAAACACGCC 60.527 50.000 0.00 0.00 0.00 5.68
71 72 2.426752 CAAGCCGAAAACACGCCG 60.427 61.111 0.00 0.00 0.00 6.46
72 73 2.589442 AAGCCGAAAACACGCCGA 60.589 55.556 0.00 0.00 0.00 5.54
73 74 2.181521 AAGCCGAAAACACGCCGAA 61.182 52.632 0.00 0.00 0.00 4.30
74 75 2.383027 AAGCCGAAAACACGCCGAAC 62.383 55.000 0.00 0.00 0.00 3.95
75 76 2.888998 GCCGAAAACACGCCGAACT 61.889 57.895 0.00 0.00 0.00 3.01
76 77 1.559149 GCCGAAAACACGCCGAACTA 61.559 55.000 0.00 0.00 0.00 2.24
77 78 1.073177 CCGAAAACACGCCGAACTAT 58.927 50.000 0.00 0.00 0.00 2.12
78 79 1.201877 CCGAAAACACGCCGAACTATG 60.202 52.381 0.00 0.00 0.00 2.23
79 80 1.458064 CGAAAACACGCCGAACTATGT 59.542 47.619 0.00 0.00 0.00 2.29
80 81 2.720590 CGAAAACACGCCGAACTATGTG 60.721 50.000 0.00 0.00 38.28 3.21
81 82 2.157834 AAACACGCCGAACTATGTGA 57.842 45.000 0.00 0.00 36.25 3.58
82 83 1.710013 AACACGCCGAACTATGTGAG 58.290 50.000 0.00 0.00 36.25 3.51
83 84 0.108804 ACACGCCGAACTATGTGAGG 60.109 55.000 0.00 0.00 36.25 3.86
84 85 0.172578 CACGCCGAACTATGTGAGGA 59.827 55.000 0.00 0.00 34.29 3.71
85 86 0.456221 ACGCCGAACTATGTGAGGAG 59.544 55.000 0.00 0.00 0.00 3.69
86 87 0.872021 CGCCGAACTATGTGAGGAGC 60.872 60.000 0.00 0.00 0.00 4.70
87 88 0.461961 GCCGAACTATGTGAGGAGCT 59.538 55.000 0.00 0.00 0.00 4.09
88 89 1.681793 GCCGAACTATGTGAGGAGCTA 59.318 52.381 0.00 0.00 0.00 3.32
89 90 2.100916 GCCGAACTATGTGAGGAGCTAA 59.899 50.000 0.00 0.00 0.00 3.09
90 91 3.243907 GCCGAACTATGTGAGGAGCTAAT 60.244 47.826 0.00 0.00 0.00 1.73
91 92 4.740934 GCCGAACTATGTGAGGAGCTAATT 60.741 45.833 0.00 0.00 0.00 1.40
92 93 4.747108 CCGAACTATGTGAGGAGCTAATTG 59.253 45.833 0.00 0.00 0.00 2.32
93 94 5.451937 CCGAACTATGTGAGGAGCTAATTGA 60.452 44.000 0.00 0.00 0.00 2.57
94 95 6.219473 CGAACTATGTGAGGAGCTAATTGAT 58.781 40.000 0.00 0.00 0.00 2.57
95 96 6.703607 CGAACTATGTGAGGAGCTAATTGATT 59.296 38.462 0.00 0.00 0.00 2.57
96 97 7.095857 CGAACTATGTGAGGAGCTAATTGATTC 60.096 40.741 0.00 0.00 0.00 2.52
97 98 6.529220 ACTATGTGAGGAGCTAATTGATTCC 58.471 40.000 0.00 0.00 0.00 3.01
98 99 5.643421 ATGTGAGGAGCTAATTGATTCCT 57.357 39.130 6.25 6.25 42.60 3.36
99 100 6.753913 ATGTGAGGAGCTAATTGATTCCTA 57.246 37.500 6.48 0.00 40.07 2.94
100 101 6.166984 TGTGAGGAGCTAATTGATTCCTAG 57.833 41.667 6.48 0.00 40.07 3.02
101 102 5.663106 TGTGAGGAGCTAATTGATTCCTAGT 59.337 40.000 6.48 0.00 40.07 2.57
102 103 6.156949 TGTGAGGAGCTAATTGATTCCTAGTT 59.843 38.462 6.48 0.00 40.07 2.24
103 104 6.481644 GTGAGGAGCTAATTGATTCCTAGTTG 59.518 42.308 6.48 0.00 40.07 3.16
104 105 5.372373 AGGAGCTAATTGATTCCTAGTTGC 58.628 41.667 5.06 0.00 38.26 4.17
105 106 5.131809 AGGAGCTAATTGATTCCTAGTTGCT 59.868 40.000 5.06 0.00 38.26 3.91
106 107 5.825151 GGAGCTAATTGATTCCTAGTTGCTT 59.175 40.000 0.00 0.00 27.66 3.91
107 108 6.238593 GGAGCTAATTGATTCCTAGTTGCTTG 60.239 42.308 0.00 0.00 27.66 4.01
108 109 5.067023 AGCTAATTGATTCCTAGTTGCTTGC 59.933 40.000 0.00 0.00 0.00 4.01
109 110 4.361451 AATTGATTCCTAGTTGCTTGCG 57.639 40.909 0.00 0.00 0.00 4.85
110 111 2.760634 TGATTCCTAGTTGCTTGCGA 57.239 45.000 0.00 0.00 0.00 5.10
111 112 3.052455 TGATTCCTAGTTGCTTGCGAA 57.948 42.857 0.00 0.00 0.00 4.70
112 113 3.407698 TGATTCCTAGTTGCTTGCGAAA 58.592 40.909 0.00 0.00 0.00 3.46
113 114 3.818210 TGATTCCTAGTTGCTTGCGAAAA 59.182 39.130 0.00 0.00 0.00 2.29
114 115 4.458989 TGATTCCTAGTTGCTTGCGAAAAT 59.541 37.500 0.00 0.00 0.00 1.82
115 116 4.846779 TTCCTAGTTGCTTGCGAAAATT 57.153 36.364 0.00 0.00 0.00 1.82
116 117 4.419522 TCCTAGTTGCTTGCGAAAATTC 57.580 40.909 0.00 0.00 0.00 2.17
117 118 3.818210 TCCTAGTTGCTTGCGAAAATTCA 59.182 39.130 0.00 0.00 0.00 2.57
118 119 3.914364 CCTAGTTGCTTGCGAAAATTCAC 59.086 43.478 0.00 0.00 0.00 3.18
119 120 2.384382 AGTTGCTTGCGAAAATTCACG 58.616 42.857 0.00 0.00 0.00 4.35
127 128 1.323791 CGAAAATTCACGCCGAAACC 58.676 50.000 0.00 0.00 37.12 3.27
128 129 1.693467 GAAAATTCACGCCGAAACCC 58.307 50.000 0.00 0.00 37.12 4.11
129 130 0.039888 AAAATTCACGCCGAAACCCG 60.040 50.000 0.00 0.00 37.12 5.28
130 131 2.466520 AAATTCACGCCGAAACCCGC 62.467 55.000 0.00 0.00 37.12 6.13
146 147 3.501548 GCCGAACCGCGCCAAATA 61.502 61.111 0.00 0.00 39.11 1.40
147 148 2.830285 GCCGAACCGCGCCAAATAT 61.830 57.895 0.00 0.00 39.11 1.28
148 149 1.010125 CCGAACCGCGCCAAATATG 60.010 57.895 0.00 0.00 39.11 1.78
160 161 1.266718 CCAAATATGGGCCGATTCACG 59.733 52.381 5.24 0.00 43.51 4.35
161 162 0.951558 AAATATGGGCCGATTCACGC 59.048 50.000 5.24 0.00 41.07 5.34
162 163 0.179032 AATATGGGCCGATTCACGCA 60.179 50.000 5.24 0.00 41.07 5.24
163 164 0.603707 ATATGGGCCGATTCACGCAG 60.604 55.000 5.24 0.00 41.07 5.18
165 166 2.746277 GGGCCGATTCACGCAGTT 60.746 61.111 0.00 0.00 41.61 3.16
166 167 1.448893 GGGCCGATTCACGCAGTTA 60.449 57.895 0.00 0.00 41.61 2.24
167 168 0.814010 GGGCCGATTCACGCAGTTAT 60.814 55.000 0.00 0.00 41.61 1.89
168 169 0.582005 GGCCGATTCACGCAGTTATC 59.418 55.000 0.00 0.00 41.61 1.75
169 170 0.229753 GCCGATTCACGCAGTTATCG 59.770 55.000 0.00 0.00 45.86 2.92
171 172 0.852777 CGATTCACGCAGTTATCGGG 59.147 55.000 0.00 0.00 43.96 5.14
172 173 0.582005 GATTCACGCAGTTATCGGGC 59.418 55.000 0.00 0.00 41.61 6.13
173 174 0.814010 ATTCACGCAGTTATCGGGCC 60.814 55.000 0.00 0.00 41.61 5.80
174 175 2.125310 CACGCAGTTATCGGGCCA 60.125 61.111 4.39 0.00 41.61 5.36
175 176 1.523711 CACGCAGTTATCGGGCCAT 60.524 57.895 4.39 0.00 41.61 4.40
176 177 1.095228 CACGCAGTTATCGGGCCATT 61.095 55.000 4.39 0.00 41.61 3.16
177 178 0.393808 ACGCAGTTATCGGGCCATTT 60.394 50.000 4.39 0.00 37.78 2.32
178 179 0.307760 CGCAGTTATCGGGCCATTTC 59.692 55.000 4.39 0.00 0.00 2.17
179 180 1.680338 GCAGTTATCGGGCCATTTCT 58.320 50.000 4.39 0.00 0.00 2.52
180 181 1.334869 GCAGTTATCGGGCCATTTCTG 59.665 52.381 4.39 6.31 0.00 3.02
181 182 2.917933 CAGTTATCGGGCCATTTCTGA 58.082 47.619 4.39 0.00 0.00 3.27
182 183 3.278574 CAGTTATCGGGCCATTTCTGAA 58.721 45.455 4.39 0.00 0.00 3.02
183 184 3.065371 CAGTTATCGGGCCATTTCTGAAC 59.935 47.826 4.39 0.00 0.00 3.18
184 185 3.013921 GTTATCGGGCCATTTCTGAACA 58.986 45.455 4.39 0.00 0.00 3.18
185 186 2.442236 ATCGGGCCATTTCTGAACAT 57.558 45.000 4.39 0.00 0.00 2.71
186 187 3.576078 ATCGGGCCATTTCTGAACATA 57.424 42.857 4.39 0.00 0.00 2.29
187 188 3.576078 TCGGGCCATTTCTGAACATAT 57.424 42.857 4.39 0.00 0.00 1.78
188 189 3.897239 TCGGGCCATTTCTGAACATATT 58.103 40.909 4.39 0.00 0.00 1.28
189 190 4.277476 TCGGGCCATTTCTGAACATATTT 58.723 39.130 4.39 0.00 0.00 1.40
190 191 4.097741 TCGGGCCATTTCTGAACATATTTG 59.902 41.667 4.39 0.00 0.00 2.32
191 192 4.696455 GGGCCATTTCTGAACATATTTGG 58.304 43.478 4.39 0.00 0.00 3.28
192 193 4.443315 GGGCCATTTCTGAACATATTTGGG 60.443 45.833 4.39 0.00 0.00 4.12
193 194 4.162131 GGCCATTTCTGAACATATTTGGGT 59.838 41.667 0.00 0.00 0.00 4.51
194 195 5.351458 GCCATTTCTGAACATATTTGGGTC 58.649 41.667 0.00 0.00 0.00 4.46
195 196 5.581605 CCATTTCTGAACATATTTGGGTCG 58.418 41.667 0.00 0.00 0.00 4.79
196 197 5.356751 CCATTTCTGAACATATTTGGGTCGA 59.643 40.000 0.00 0.00 0.00 4.20
197 198 6.127758 CCATTTCTGAACATATTTGGGTCGAA 60.128 38.462 0.00 0.00 0.00 3.71
198 199 6.885952 TTTCTGAACATATTTGGGTCGAAA 57.114 33.333 0.00 0.00 0.00 3.46
199 200 6.494893 TTCTGAACATATTTGGGTCGAAAG 57.505 37.500 0.00 0.00 0.00 2.62
200 201 4.394920 TCTGAACATATTTGGGTCGAAAGC 59.605 41.667 0.00 0.00 0.00 3.51
201 202 4.331968 TGAACATATTTGGGTCGAAAGCT 58.668 39.130 0.00 0.00 0.00 3.74
202 203 4.155826 TGAACATATTTGGGTCGAAAGCTG 59.844 41.667 0.00 0.00 0.00 4.24
203 204 3.016736 ACATATTTGGGTCGAAAGCTGG 58.983 45.455 0.00 0.00 0.00 4.85
204 205 2.122783 TATTTGGGTCGAAAGCTGGG 57.877 50.000 0.00 0.00 0.00 4.45
205 206 1.250840 ATTTGGGTCGAAAGCTGGGC 61.251 55.000 0.00 0.00 0.00 5.36
206 207 2.351924 TTTGGGTCGAAAGCTGGGCT 62.352 55.000 0.00 0.00 42.56 5.19
207 208 2.747855 GGGTCGAAAGCTGGGCTG 60.748 66.667 0.00 0.00 39.62 4.85
208 209 2.347490 GGTCGAAAGCTGGGCTGA 59.653 61.111 0.00 0.00 39.62 4.26
209 210 1.302511 GGTCGAAAGCTGGGCTGAA 60.303 57.895 0.00 0.00 39.62 3.02
210 211 0.678048 GGTCGAAAGCTGGGCTGAAT 60.678 55.000 0.00 0.00 39.62 2.57
211 212 1.168714 GTCGAAAGCTGGGCTGAATT 58.831 50.000 0.00 0.00 39.62 2.17
212 213 1.131315 GTCGAAAGCTGGGCTGAATTC 59.869 52.381 0.00 0.00 39.62 2.17
213 214 0.097674 CGAAAGCTGGGCTGAATTCG 59.902 55.000 9.37 9.37 39.06 3.34
214 215 0.453390 GAAAGCTGGGCTGAATTCGG 59.547 55.000 10.10 10.10 39.62 4.30
221 222 3.880846 GCTGAATTCGGCGCCTGG 61.881 66.667 26.68 10.37 38.61 4.45
222 223 3.204827 CTGAATTCGGCGCCTGGG 61.205 66.667 26.68 9.50 0.00 4.45
223 224 4.794648 TGAATTCGGCGCCTGGGG 62.795 66.667 26.68 9.07 0.00 4.96
273 274 2.124487 CCCCCAGCGCCGATTTTA 60.124 61.111 2.29 0.00 0.00 1.52
274 275 1.528309 CCCCCAGCGCCGATTTTAT 60.528 57.895 2.29 0.00 0.00 1.40
275 276 1.515521 CCCCCAGCGCCGATTTTATC 61.516 60.000 2.29 0.00 0.00 1.75
276 277 0.817634 CCCCAGCGCCGATTTTATCA 60.818 55.000 2.29 0.00 0.00 2.15
277 278 0.307760 CCCAGCGCCGATTTTATCAC 59.692 55.000 2.29 0.00 0.00 3.06
278 279 0.307760 CCAGCGCCGATTTTATCACC 59.692 55.000 2.29 0.00 0.00 4.02
279 280 0.042188 CAGCGCCGATTTTATCACCG 60.042 55.000 2.29 0.00 0.00 4.94
280 281 1.157870 AGCGCCGATTTTATCACCGG 61.158 55.000 2.29 0.00 44.34 5.28
281 282 1.155424 GCGCCGATTTTATCACCGGA 61.155 55.000 9.46 0.00 44.29 5.14
282 283 0.859232 CGCCGATTTTATCACCGGAG 59.141 55.000 9.46 0.00 44.29 4.63
283 284 0.586802 GCCGATTTTATCACCGGAGC 59.413 55.000 9.46 0.00 44.29 4.70
284 285 1.948104 CCGATTTTATCACCGGAGCA 58.052 50.000 9.46 0.00 44.29 4.26
285 286 1.597663 CCGATTTTATCACCGGAGCAC 59.402 52.381 9.46 0.00 44.29 4.40
286 287 2.550978 CGATTTTATCACCGGAGCACT 58.449 47.619 9.46 0.00 0.00 4.40
287 288 2.540101 CGATTTTATCACCGGAGCACTC 59.460 50.000 9.46 0.00 0.00 3.51
288 289 3.738281 CGATTTTATCACCGGAGCACTCT 60.738 47.826 9.46 0.00 0.00 3.24
289 290 2.961526 TTTATCACCGGAGCACTCTC 57.038 50.000 9.46 0.00 38.62 3.20
290 291 1.847328 TTATCACCGGAGCACTCTCA 58.153 50.000 9.46 0.00 41.13 3.27
291 292 1.393603 TATCACCGGAGCACTCTCAG 58.606 55.000 9.46 0.00 41.13 3.35
295 296 2.487428 CGGAGCACTCTCAGGACG 59.513 66.667 0.00 0.00 41.13 4.79
296 297 2.183046 GGAGCACTCTCAGGACGC 59.817 66.667 0.00 0.00 41.13 5.19
297 298 2.347322 GGAGCACTCTCAGGACGCT 61.347 63.158 0.00 0.00 41.13 5.07
298 299 1.138671 GAGCACTCTCAGGACGCTC 59.861 63.158 0.00 0.00 41.98 5.03
299 300 1.304052 AGCACTCTCAGGACGCTCT 60.304 57.895 0.00 0.00 0.00 4.09
300 301 0.897863 AGCACTCTCAGGACGCTCTT 60.898 55.000 0.00 0.00 0.00 2.85
301 302 0.037790 GCACTCTCAGGACGCTCTTT 60.038 55.000 0.00 0.00 0.00 2.52
302 303 1.606737 GCACTCTCAGGACGCTCTTTT 60.607 52.381 0.00 0.00 0.00 2.27
303 304 2.760374 CACTCTCAGGACGCTCTTTTT 58.240 47.619 0.00 0.00 0.00 1.94
304 305 2.734079 CACTCTCAGGACGCTCTTTTTC 59.266 50.000 0.00 0.00 0.00 2.29
305 306 1.989165 CTCTCAGGACGCTCTTTTTCG 59.011 52.381 0.00 0.00 0.00 3.46
306 307 1.611977 TCTCAGGACGCTCTTTTTCGA 59.388 47.619 0.00 0.00 0.00 3.71
307 308 1.721926 CTCAGGACGCTCTTTTTCGAC 59.278 52.381 0.00 0.00 0.00 4.20
308 309 0.435008 CAGGACGCTCTTTTTCGACG 59.565 55.000 0.00 0.00 0.00 5.12
309 310 1.130009 GGACGCTCTTTTTCGACGC 59.870 57.895 0.00 0.00 0.00 5.19
310 311 1.130009 GACGCTCTTTTTCGACGCC 59.870 57.895 0.00 0.00 0.00 5.68
311 312 2.224205 GACGCTCTTTTTCGACGCCC 62.224 60.000 0.00 0.00 0.00 6.13
312 313 2.027625 CGCTCTTTTTCGACGCCCT 61.028 57.895 0.00 0.00 0.00 5.19
313 314 1.497722 GCTCTTTTTCGACGCCCTG 59.502 57.895 0.00 0.00 0.00 4.45
314 315 1.912371 GCTCTTTTTCGACGCCCTGG 61.912 60.000 0.00 0.00 0.00 4.45
315 316 1.298859 CTCTTTTTCGACGCCCTGGG 61.299 60.000 8.86 8.86 0.00 4.45
316 317 2.281900 TTTTTCGACGCCCTGGGG 60.282 61.111 16.03 7.28 38.57 4.96
337 338 2.109799 CGAATGGCCGGAGATGCT 59.890 61.111 5.05 0.00 0.00 3.79
338 339 1.958205 CGAATGGCCGGAGATGCTC 60.958 63.158 5.05 0.00 0.00 4.26
376 377 6.094881 ACCAATGGATATTCGTTTGTAACCTG 59.905 38.462 6.16 0.00 0.00 4.00
377 378 6.317642 CCAATGGATATTCGTTTGTAACCTGA 59.682 38.462 0.00 0.00 0.00 3.86
378 379 6.920569 ATGGATATTCGTTTGTAACCTGAC 57.079 37.500 0.00 0.00 0.00 3.51
380 381 4.269363 GGATATTCGTTTGTAACCTGACCG 59.731 45.833 0.00 0.00 0.00 4.79
450 462 5.339990 CCTTTTAATAATTGCTCACACCCG 58.660 41.667 0.00 0.00 0.00 5.28
474 486 3.694043 TTTCCCATTCAGTGACATCGA 57.306 42.857 0.00 0.00 0.00 3.59
579 591 1.896220 TCACACCTGTTGCTTGATCC 58.104 50.000 0.00 0.00 0.00 3.36
586 598 0.179032 TGTTGCTTGATCCACCACGT 60.179 50.000 0.00 0.00 0.00 4.49
600 612 1.227147 CACGTCGTGTCCAACTGGT 60.227 57.895 17.30 0.00 36.34 4.00
912 925 5.793457 GCGTTAAAAATGCTGTAATTCGTCT 59.207 36.000 0.00 0.00 40.27 4.18
1011 1024 3.476419 CCCGTCGCCTAACCCCAT 61.476 66.667 0.00 0.00 0.00 4.00
1012 1025 2.135581 CCCGTCGCCTAACCCCATA 61.136 63.158 0.00 0.00 0.00 2.74
1330 1344 2.651361 CGTGAGTTCGAGGGCAGT 59.349 61.111 0.00 0.00 0.00 4.40
1331 1345 1.444553 CGTGAGTTCGAGGGCAGTC 60.445 63.158 0.00 0.00 0.00 3.51
1357 1371 0.249489 ACTCCATCGCGGTAAGATGC 60.249 55.000 6.13 0.00 42.92 3.91
1359 1373 1.961277 CCATCGCGGTAAGATGCCC 60.961 63.158 6.13 0.00 42.92 5.36
1403 1431 4.578898 TTCGCGTCGGTGTGTGCT 62.579 61.111 5.77 0.00 0.00 4.40
1409 1437 4.947147 TCGGTGTGTGCTTGGGGC 62.947 66.667 0.00 0.00 42.22 5.80
1424 1452 0.108472 GGGGCCTGTAGTTGTACGAC 60.108 60.000 0.84 4.97 30.95 4.34
1444 1472 4.091509 CGACTTGTGCTATTGTGTTACCTC 59.908 45.833 0.00 0.00 0.00 3.85
1475 1503 1.462670 GCTTCTTTCACTTGCTCTCCG 59.537 52.381 0.00 0.00 0.00 4.63
1566 1594 3.500680 TGCCAACTGTCGGTTCTAATTTC 59.499 43.478 0.00 0.00 35.74 2.17
1605 1633 6.072098 CGTATATAGACTACACTGTGCTTCG 58.928 44.000 7.90 0.00 0.00 3.79
1665 1693 3.935203 CTGAAATAACCTGTGATCACGCT 59.065 43.478 20.54 7.56 0.00 5.07
1675 1703 0.319211 TGATCACGCTCGGTTTCGTT 60.319 50.000 0.00 0.00 36.73 3.85
1780 1820 0.459489 TTGTGTTTGTTGCTGGGCTC 59.541 50.000 0.00 0.00 0.00 4.70
1782 1822 1.133945 TGTGTTTGTTGCTGGGCTCTA 60.134 47.619 0.00 0.00 0.00 2.43
1807 1847 2.304761 TGTACTCCCAGGCAAGGTTTAG 59.695 50.000 0.00 0.00 0.00 1.85
1924 1967 5.444663 AAAGTTTGGATGAAGCTCTGTTC 57.555 39.130 0.00 0.00 0.00 3.18
1926 1969 4.723309 AGTTTGGATGAAGCTCTGTTCTT 58.277 39.130 0.00 0.00 0.00 2.52
1971 2014 4.241681 GTTGCAGTTTGAACCTTGAACAA 58.758 39.130 0.00 0.00 0.00 2.83
2096 2141 6.476243 TTCGTTCTCCTGTTGCTTTATTAC 57.524 37.500 0.00 0.00 0.00 1.89
2099 2144 6.367969 TCGTTCTCCTGTTGCTTTATTACTTC 59.632 38.462 0.00 0.00 0.00 3.01
2562 2609 9.708092 GAAAAGGAGTTCACTGTTAATAGTACT 57.292 33.333 4.38 6.07 0.00 2.73
2787 2835 4.869297 TGTTTTGCATGGAGTTTTTGTCAG 59.131 37.500 0.00 0.00 0.00 3.51
2840 2888 1.209261 TGCAACTGTGAAGAGGTGACA 59.791 47.619 0.00 0.00 31.73 3.58
2972 3021 6.256975 GTGTATAATGAACACGCTATTGGACA 59.743 38.462 0.00 0.00 38.03 4.02
3103 3152 9.635155 CTGGAAGACATAAATCACCTGAGGTGT 62.635 44.444 29.17 14.41 45.86 4.16
3204 3253 4.432741 GGAACTGGCAGGGAGGGC 62.433 72.222 20.34 0.95 0.00 5.19
3439 3613 6.555315 CAACAATGGCCTTAATGTCTACTTC 58.445 40.000 3.32 0.00 0.00 3.01
3490 3664 7.651304 TCTGAATTTTGATTTGCATTGTAACGT 59.349 29.630 0.00 0.00 0.00 3.99
3574 4832 3.690422 ACAATGTATTAATTGCACGCGG 58.310 40.909 12.47 0.00 40.54 6.46
3647 4910 6.959639 TGGTTTGATGGCCTAGATTAATTC 57.040 37.500 3.32 0.00 0.00 2.17
3730 4995 7.936496 ACATCACCAATAACAATGTATGACA 57.064 32.000 0.00 0.00 0.00 3.58
3761 5026 3.630312 GGTCTAAGTTTGTGGCTGAAACA 59.370 43.478 12.43 0.00 36.03 2.83
3973 5238 5.298276 AGAAACTTGCCGAATAGACAAAACA 59.702 36.000 0.00 0.00 0.00 2.83
3988 5253 4.193090 ACAAAACAATCAGTACGACCACA 58.807 39.130 0.00 0.00 0.00 4.17
4237 5502 1.004044 ACAGCAAACCAGCAGCTCTAT 59.996 47.619 0.00 0.00 36.26 1.98
5055 6320 8.590204 TCAAAGTAAGTCACCTCATACATACAA 58.410 33.333 0.00 0.00 0.00 2.41
5118 6383 3.691118 TGCAAGTGCCTGTTCTGATTATC 59.309 43.478 0.00 0.00 41.18 1.75
5316 6937 1.348064 TGTCAGTAGGAACACTGGGG 58.652 55.000 3.61 0.00 44.98 4.96
5444 7065 5.821470 CAGCTTTGATCTCCATGTGACTAAT 59.179 40.000 0.00 0.00 0.00 1.73
5512 7133 2.357637 TGAATTTAAGGCATAGGCACGC 59.642 45.455 0.15 0.00 43.71 5.34
5989 7610 9.194271 CATGTGATATGTCATTAGACTCTTCTG 57.806 37.037 0.00 0.00 45.20 3.02
6040 7661 1.708993 TTGCTGCCACCAAGGACTCT 61.709 55.000 0.00 0.00 41.22 3.24
6214 7836 8.630278 ACTTACATCACATTACACGAGATAAC 57.370 34.615 0.00 0.00 0.00 1.89
6409 8031 5.841957 AAGACAAACAGAAGCATGAAGTT 57.158 34.783 0.00 0.00 0.00 2.66
6574 8197 3.889538 AGTAGATGGTAGCAATAGACGCA 59.110 43.478 0.00 0.00 0.00 5.24
6605 8228 9.664332 ACATCCTCATCAGCAATATTATTACTC 57.336 33.333 0.00 0.00 0.00 2.59
6606 8229 9.107177 CATCCTCATCAGCAATATTATTACTCC 57.893 37.037 0.00 0.00 0.00 3.85
6607 8230 7.624549 TCCTCATCAGCAATATTATTACTCCC 58.375 38.462 0.00 0.00 0.00 4.30
6608 8231 7.459125 TCCTCATCAGCAATATTATTACTCCCT 59.541 37.037 0.00 0.00 0.00 4.20
6609 8232 7.768120 CCTCATCAGCAATATTATTACTCCCTC 59.232 40.741 0.00 0.00 0.00 4.30
6610 8233 7.624549 TCATCAGCAATATTATTACTCCCTCC 58.375 38.462 0.00 0.00 0.00 4.30
6611 8234 6.037786 TCAGCAATATTATTACTCCCTCCG 57.962 41.667 0.00 0.00 0.00 4.63
6612 8235 5.542635 TCAGCAATATTATTACTCCCTCCGT 59.457 40.000 0.00 0.00 0.00 4.69
6613 8236 5.869888 CAGCAATATTATTACTCCCTCCGTC 59.130 44.000 0.00 0.00 0.00 4.79
6614 8237 5.046520 AGCAATATTATTACTCCCTCCGTCC 60.047 44.000 0.00 0.00 0.00 4.79
6615 8238 5.408356 CAATATTATTACTCCCTCCGTCCG 58.592 45.833 0.00 0.00 0.00 4.79
6616 8239 1.696063 TTATTACTCCCTCCGTCCGG 58.304 55.000 0.00 0.00 0.00 5.14
6617 8240 0.846015 TATTACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
6618 8241 0.032813 ATTACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
6619 8242 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
6620 8243 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
6621 8244 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
6622 8245 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
6623 8246 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
6624 8247 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
6625 8248 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
6626 8249 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
6627 8250 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
6628 8251 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
6629 8252 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
6630 8253 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
6631 8254 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
6632 8255 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
6633 8256 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
6634 8257 5.064707 CGTCCGGAAATACTTGTCATCAAAT 59.935 40.000 5.23 0.00 32.87 2.32
6635 8258 6.403200 CGTCCGGAAATACTTGTCATCAAATT 60.403 38.462 5.23 0.00 32.87 1.82
6636 8259 6.747280 GTCCGGAAATACTTGTCATCAAATTG 59.253 38.462 5.23 0.00 32.87 2.32
6637 8260 6.035843 CCGGAAATACTTGTCATCAAATTGG 58.964 40.000 0.00 0.00 32.87 3.16
6638 8261 6.127758 CCGGAAATACTTGTCATCAAATTGGA 60.128 38.462 0.00 0.00 32.87 3.53
6639 8262 7.416664 CCGGAAATACTTGTCATCAAATTGGAT 60.417 37.037 0.00 0.00 32.87 3.41
6640 8263 8.620416 CGGAAATACTTGTCATCAAATTGGATA 58.380 33.333 0.00 0.00 32.87 2.59
6647 8270 8.526147 ACTTGTCATCAAATTGGATAAAAGAGG 58.474 33.333 14.06 0.27 32.87 3.69
6648 8271 8.648698 TTGTCATCAAATTGGATAAAAGAGGA 57.351 30.769 0.00 0.00 0.00 3.71
6649 8272 8.827832 TGTCATCAAATTGGATAAAAGAGGAT 57.172 30.769 0.00 0.00 0.00 3.24
6650 8273 8.689061 TGTCATCAAATTGGATAAAAGAGGATG 58.311 33.333 0.00 0.00 0.00 3.51
6651 8274 8.689972 GTCATCAAATTGGATAAAAGAGGATGT 58.310 33.333 0.00 0.00 32.47 3.06
6652 8275 9.919416 TCATCAAATTGGATAAAAGAGGATGTA 57.081 29.630 0.00 0.00 32.47 2.29
6661 8284 9.607333 TGGATAAAAGAGGATGTATCTAGATGT 57.393 33.333 15.79 1.25 0.00 3.06
6707 8330 9.918630 CTCTTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
6714 8337 7.307493 TCCATTTTGATGACAAGTATTCTCG 57.693 36.000 0.00 0.00 37.32 4.04
6715 8338 6.316140 TCCATTTTGATGACAAGTATTCTCGG 59.684 38.462 0.00 0.00 37.32 4.63
6716 8339 6.316140 CCATTTTGATGACAAGTATTCTCGGA 59.684 38.462 0.00 0.00 37.32 4.55
6717 8340 6.721571 TTTTGATGACAAGTATTCTCGGAC 57.278 37.500 0.00 0.00 37.32 4.79
6718 8341 4.028852 TGATGACAAGTATTCTCGGACG 57.971 45.455 0.00 0.00 0.00 4.79
6719 8342 2.933495 TGACAAGTATTCTCGGACGG 57.067 50.000 0.00 0.00 0.00 4.79
6720 8343 2.439409 TGACAAGTATTCTCGGACGGA 58.561 47.619 0.00 0.00 0.00 4.69
6721 8344 2.422479 TGACAAGTATTCTCGGACGGAG 59.578 50.000 3.68 3.68 44.58 4.63
6722 8345 1.749634 ACAAGTATTCTCGGACGGAGG 59.250 52.381 9.88 0.00 43.34 4.30
6723 8346 1.067212 CAAGTATTCTCGGACGGAGGG 59.933 57.143 9.88 0.00 43.34 4.30
6724 8347 0.549950 AGTATTCTCGGACGGAGGGA 59.450 55.000 9.88 0.77 43.34 4.20
6725 8348 0.953003 GTATTCTCGGACGGAGGGAG 59.047 60.000 9.88 0.00 43.34 4.30
6726 8349 0.549950 TATTCTCGGACGGAGGGAGT 59.450 55.000 9.88 0.00 43.34 3.85
6727 8350 0.549950 ATTCTCGGACGGAGGGAGTA 59.450 55.000 9.88 0.00 43.34 2.59
6728 8351 0.107312 TTCTCGGACGGAGGGAGTAG 60.107 60.000 9.88 0.00 43.34 2.57
6738 8361 2.688958 CGGAGGGAGTAGAAGTTACTGG 59.311 54.545 0.00 0.00 0.00 4.00
6774 8397 3.193479 ACAAGTCGCATCATAGTCTGTCA 59.807 43.478 0.00 0.00 0.00 3.58
6791 8414 8.371770 AGTCTGTCATACTTTTCTTGAGTTTC 57.628 34.615 0.00 0.00 0.00 2.78
6855 8479 7.268447 CGTAGCTTATGTTAGTGTTTGAAAAGC 59.732 37.037 0.00 0.00 37.63 3.51
7293 8918 6.966021 TCACTCTGTTATTTTGTTGGTTAGC 58.034 36.000 0.00 0.00 0.00 3.09
7310 8937 3.005205 GCCTTTTGGGTTGCCTTTG 57.995 52.632 0.00 0.00 40.82 2.77
7356 8983 3.005554 ACTGAGTGCACTGCATAATGAC 58.994 45.455 27.27 6.78 41.91 3.06
7511 9138 2.435805 CTGGTAGCTCATTTAGAGGGCA 59.564 50.000 0.00 0.00 44.86 5.36
7575 9202 2.266055 CCTTCAGGCACCGAGTCC 59.734 66.667 0.00 0.00 0.00 3.85
7605 9232 2.147958 GCAAAACCCGACATGAGTGTA 58.852 47.619 0.00 0.00 39.09 2.90
7913 9544 2.167281 CCCTTGTCGATGATCAGTCTGT 59.833 50.000 0.09 0.00 0.00 3.41
7973 9604 7.256286 GGCTTACTCAGACTCGAAATAAGTTA 58.744 38.462 0.00 0.00 0.00 2.24
7981 9612 7.116376 TCAGACTCGAAATAAGTTACAGCTTTG 59.884 37.037 0.00 0.00 0.00 2.77
7982 9613 7.116376 CAGACTCGAAATAAGTTACAGCTTTGA 59.884 37.037 0.00 0.00 0.00 2.69
7983 9614 7.656137 AGACTCGAAATAAGTTACAGCTTTGAA 59.344 33.333 0.00 0.00 0.00 2.69
8005 9636 3.569701 AGTTGTATTGGTGGTTGCTTCAG 59.430 43.478 0.00 0.00 0.00 3.02
8021 9652 3.217242 CAGTGAGGACTGGTTTCGG 57.783 57.895 0.00 0.00 45.26 4.30
8039 9670 1.071699 CGGACTTGACCAAAAGGAGGA 59.928 52.381 0.00 0.00 0.00 3.71
8362 9999 2.335933 ACTTGCTAGTTGTACCCTGGT 58.664 47.619 0.00 0.00 0.00 4.00
8375 10012 1.427368 ACCCTGGTTGTGAATTGGCTA 59.573 47.619 0.00 0.00 0.00 3.93
8414 11153 6.973843 TCCATGCTGAATTTATGTATGCTTC 58.026 36.000 0.00 0.00 0.00 3.86
8415 11154 5.854866 CCATGCTGAATTTATGTATGCTTCG 59.145 40.000 0.00 0.00 0.00 3.79
8434 11213 3.833732 TCGTAGTTATCCTGGCTGATCT 58.166 45.455 0.00 0.00 0.00 2.75
8471 11250 5.754406 AGTCTGCTGTAGTAGTGTATACTCG 59.246 44.000 4.17 0.00 38.36 4.18
8520 11299 0.736325 ATACGCGTCTGTGCTGAACC 60.736 55.000 18.63 0.00 0.00 3.62
8521 11300 2.077821 TACGCGTCTGTGCTGAACCA 62.078 55.000 18.63 0.00 0.00 3.67
8524 11303 0.593128 GCGTCTGTGCTGAACCAATT 59.407 50.000 0.00 0.00 0.00 2.32
8525 11304 1.400242 GCGTCTGTGCTGAACCAATTC 60.400 52.381 0.00 0.00 35.18 2.17
8555 11334 1.007387 GTTGTTGCTTTGGCCCTCG 60.007 57.895 0.00 0.00 37.74 4.63
8605 11441 7.526608 GGCAAAAACTAATGCGCATATATCTA 58.473 34.615 25.61 10.98 43.47 1.98
8679 11515 1.341852 TGTTTGAGCGTAGGCACAGTA 59.658 47.619 10.48 0.00 40.82 2.74
8684 11520 3.670625 TGAGCGTAGGCACAGTATTTTT 58.329 40.909 10.48 0.00 43.41 1.94
8685 11521 3.682858 TGAGCGTAGGCACAGTATTTTTC 59.317 43.478 10.48 0.00 43.41 2.29
8740 11576 1.202330 AAGCTGCTCAGACTATGCCT 58.798 50.000 1.00 0.00 0.00 4.75
8741 11577 1.202330 AGCTGCTCAGACTATGCCTT 58.798 50.000 0.00 0.00 0.00 4.35
8768 11604 2.193536 GCCCAACCCATGATACGGC 61.194 63.158 0.00 0.00 0.00 5.68
8770 11606 0.819259 CCCAACCCATGATACGGCAG 60.819 60.000 0.00 0.00 0.00 4.85
8775 11611 1.980765 ACCCATGATACGGCAGATCAT 59.019 47.619 0.00 5.51 43.34 2.45
8780 11616 4.559153 CATGATACGGCAGATCATACACA 58.441 43.478 9.96 0.00 41.16 3.72
8781 11617 3.977427 TGATACGGCAGATCATACACAC 58.023 45.455 0.00 0.00 0.00 3.82
8782 11618 2.485266 TACGGCAGATCATACACACG 57.515 50.000 0.00 0.00 0.00 4.49
8783 11619 0.530744 ACGGCAGATCATACACACGT 59.469 50.000 0.00 0.00 0.00 4.49
8784 11620 1.200483 CGGCAGATCATACACACGTC 58.800 55.000 0.00 0.00 0.00 4.34
8785 11621 1.200483 GGCAGATCATACACACGTCG 58.800 55.000 0.00 0.00 0.00 5.12
8786 11622 1.200483 GCAGATCATACACACGTCGG 58.800 55.000 0.00 0.00 0.00 4.79
8787 11623 1.469251 GCAGATCATACACACGTCGGT 60.469 52.381 0.00 0.00 0.00 4.69
8796 11632 2.989824 CACGTCGGTGGAGGGAGT 60.990 66.667 0.00 0.00 40.58 3.85
8797 11633 2.989824 ACGTCGGTGGAGGGAGTG 60.990 66.667 0.00 0.00 32.40 3.51
8798 11634 2.675423 CGTCGGTGGAGGGAGTGA 60.675 66.667 0.00 0.00 0.00 3.41
8799 11635 2.701780 CGTCGGTGGAGGGAGTGAG 61.702 68.421 0.00 0.00 0.00 3.51
8800 11636 2.037367 TCGGTGGAGGGAGTGAGG 59.963 66.667 0.00 0.00 0.00 3.86
8801 11637 3.077556 CGGTGGAGGGAGTGAGGG 61.078 72.222 0.00 0.00 0.00 4.30
8802 11638 2.450243 GGTGGAGGGAGTGAGGGA 59.550 66.667 0.00 0.00 0.00 4.20
8803 11639 1.687493 GGTGGAGGGAGTGAGGGAG 60.687 68.421 0.00 0.00 0.00 4.30
8804 11640 1.388531 GTGGAGGGAGTGAGGGAGA 59.611 63.158 0.00 0.00 0.00 3.71
8805 11641 0.973496 GTGGAGGGAGTGAGGGAGAC 60.973 65.000 0.00 0.00 0.00 3.36
8806 11642 1.149782 TGGAGGGAGTGAGGGAGACT 61.150 60.000 0.00 0.00 0.00 3.24
8807 11643 0.686112 GGAGGGAGTGAGGGAGACTG 60.686 65.000 0.00 0.00 0.00 3.51
8808 11644 1.305718 AGGGAGTGAGGGAGACTGC 60.306 63.158 0.00 0.00 0.00 4.40
8809 11645 1.610673 GGGAGTGAGGGAGACTGCA 60.611 63.158 0.00 0.00 33.67 4.41
8810 11646 1.594310 GGAGTGAGGGAGACTGCAC 59.406 63.158 0.00 0.00 32.37 4.57
8811 11647 1.214062 GAGTGAGGGAGACTGCACG 59.786 63.158 0.00 0.00 34.50 5.34
8812 11648 2.433318 GTGAGGGAGACTGCACGC 60.433 66.667 0.00 0.00 0.00 5.34
8813 11649 4.056125 TGAGGGAGACTGCACGCG 62.056 66.667 3.53 3.53 0.00 6.01
8814 11650 3.749064 GAGGGAGACTGCACGCGA 61.749 66.667 15.93 0.00 0.00 5.87
8815 11651 3.069980 GAGGGAGACTGCACGCGAT 62.070 63.158 15.93 0.00 0.00 4.58
8816 11652 2.583593 GGGAGACTGCACGCGATC 60.584 66.667 15.93 3.92 0.00 3.69
8817 11653 2.181777 GGAGACTGCACGCGATCA 59.818 61.111 15.93 9.16 0.00 2.92
8818 11654 1.875813 GGAGACTGCACGCGATCAG 60.876 63.158 15.93 20.88 36.45 2.90
8819 11655 1.875813 GAGACTGCACGCGATCAGG 60.876 63.158 26.42 14.44 34.76 3.86
8820 11656 2.181777 GACTGCACGCGATCAGGA 59.818 61.111 26.42 10.67 34.76 3.86
8821 11657 1.875813 GACTGCACGCGATCAGGAG 60.876 63.158 26.42 19.14 34.76 3.69
8822 11658 2.271607 GACTGCACGCGATCAGGAGA 62.272 60.000 26.42 0.09 34.76 3.71
8823 11659 1.588403 CTGCACGCGATCAGGAGAG 60.588 63.158 15.93 0.00 0.00 3.20
8824 11660 2.959071 GCACGCGATCAGGAGAGC 60.959 66.667 15.93 0.00 0.00 4.09
8825 11661 2.279120 CACGCGATCAGGAGAGCC 60.279 66.667 15.93 0.00 0.00 4.70
8826 11662 3.532155 ACGCGATCAGGAGAGCCC 61.532 66.667 15.93 0.00 33.31 5.19
8827 11663 4.637489 CGCGATCAGGAGAGCCCG 62.637 72.222 0.00 0.00 40.87 6.13
8828 11664 4.959596 GCGATCAGGAGAGCCCGC 62.960 72.222 0.00 0.00 40.87 6.13
8829 11665 4.637489 CGATCAGGAGAGCCCGCG 62.637 72.222 0.00 0.00 40.87 6.46
8830 11666 4.292178 GATCAGGAGAGCCCGCGG 62.292 72.222 21.04 21.04 40.87 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.585099 GGCTTGTTTCATCACATAAATCAAATA 57.415 29.630 0.00 0.00 0.00 1.40
34 35 7.276218 CGGCTTGTTTCATCACATAAATCAAAT 59.724 33.333 0.00 0.00 0.00 2.32
35 36 6.585702 CGGCTTGTTTCATCACATAAATCAAA 59.414 34.615 0.00 0.00 0.00 2.69
36 37 6.072230 TCGGCTTGTTTCATCACATAAATCAA 60.072 34.615 0.00 0.00 0.00 2.57
37 38 5.414144 TCGGCTTGTTTCATCACATAAATCA 59.586 36.000 0.00 0.00 0.00 2.57
38 39 5.879237 TCGGCTTGTTTCATCACATAAATC 58.121 37.500 0.00 0.00 0.00 2.17
39 40 5.895636 TCGGCTTGTTTCATCACATAAAT 57.104 34.783 0.00 0.00 0.00 1.40
40 41 5.697473 TTCGGCTTGTTTCATCACATAAA 57.303 34.783 0.00 0.00 0.00 1.40
41 42 5.697473 TTTCGGCTTGTTTCATCACATAA 57.303 34.783 0.00 0.00 0.00 1.90
42 43 5.009110 TGTTTTCGGCTTGTTTCATCACATA 59.991 36.000 0.00 0.00 0.00 2.29
43 44 4.202101 TGTTTTCGGCTTGTTTCATCACAT 60.202 37.500 0.00 0.00 0.00 3.21
44 45 3.129462 TGTTTTCGGCTTGTTTCATCACA 59.871 39.130 0.00 0.00 0.00 3.58
45 46 3.485743 GTGTTTTCGGCTTGTTTCATCAC 59.514 43.478 0.00 0.00 0.00 3.06
46 47 3.701241 GTGTTTTCGGCTTGTTTCATCA 58.299 40.909 0.00 0.00 0.00 3.07
47 48 2.719046 CGTGTTTTCGGCTTGTTTCATC 59.281 45.455 0.00 0.00 0.00 2.92
48 49 2.726633 CGTGTTTTCGGCTTGTTTCAT 58.273 42.857 0.00 0.00 0.00 2.57
49 50 1.795889 GCGTGTTTTCGGCTTGTTTCA 60.796 47.619 0.00 0.00 0.00 2.69
50 51 0.843872 GCGTGTTTTCGGCTTGTTTC 59.156 50.000 0.00 0.00 0.00 2.78
51 52 2.952273 GCGTGTTTTCGGCTTGTTT 58.048 47.368 0.00 0.00 0.00 2.83
52 53 4.702020 GCGTGTTTTCGGCTTGTT 57.298 50.000 0.00 0.00 0.00 2.83
58 59 1.073177 ATAGTTCGGCGTGTTTTCGG 58.927 50.000 6.85 0.00 0.00 4.30
59 60 1.458064 ACATAGTTCGGCGTGTTTTCG 59.542 47.619 6.85 0.00 0.00 3.46
60 61 2.477375 TCACATAGTTCGGCGTGTTTTC 59.523 45.455 6.85 0.00 0.00 2.29
61 62 2.478894 CTCACATAGTTCGGCGTGTTTT 59.521 45.455 6.85 0.00 0.00 2.43
62 63 2.066262 CTCACATAGTTCGGCGTGTTT 58.934 47.619 6.85 0.00 0.00 2.83
63 64 1.671850 CCTCACATAGTTCGGCGTGTT 60.672 52.381 6.85 0.00 0.00 3.32
64 65 0.108804 CCTCACATAGTTCGGCGTGT 60.109 55.000 6.85 0.00 0.00 4.49
65 66 0.172578 TCCTCACATAGTTCGGCGTG 59.827 55.000 6.85 0.00 0.00 5.34
66 67 0.456221 CTCCTCACATAGTTCGGCGT 59.544 55.000 6.85 0.00 0.00 5.68
67 68 0.872021 GCTCCTCACATAGTTCGGCG 60.872 60.000 0.00 0.00 0.00 6.46
68 69 0.461961 AGCTCCTCACATAGTTCGGC 59.538 55.000 0.00 0.00 0.00 5.54
69 70 4.592485 ATTAGCTCCTCACATAGTTCGG 57.408 45.455 0.00 0.00 0.00 4.30
70 71 5.592054 TCAATTAGCTCCTCACATAGTTCG 58.408 41.667 0.00 0.00 0.00 3.95
71 72 7.172361 GGAATCAATTAGCTCCTCACATAGTTC 59.828 40.741 0.00 0.00 0.00 3.01
72 73 6.995091 GGAATCAATTAGCTCCTCACATAGTT 59.005 38.462 0.00 0.00 0.00 2.24
73 74 6.328672 AGGAATCAATTAGCTCCTCACATAGT 59.671 38.462 0.00 0.00 32.68 2.12
74 75 6.767456 AGGAATCAATTAGCTCCTCACATAG 58.233 40.000 0.00 0.00 32.68 2.23
75 76 6.753913 AGGAATCAATTAGCTCCTCACATA 57.246 37.500 0.00 0.00 32.68 2.29
76 77 5.643421 AGGAATCAATTAGCTCCTCACAT 57.357 39.130 0.00 0.00 32.68 3.21
77 78 5.663106 ACTAGGAATCAATTAGCTCCTCACA 59.337 40.000 0.00 0.00 39.13 3.58
78 79 6.168270 ACTAGGAATCAATTAGCTCCTCAC 57.832 41.667 0.00 0.00 39.13 3.51
79 80 6.586344 CAACTAGGAATCAATTAGCTCCTCA 58.414 40.000 0.00 0.00 39.13 3.86
80 81 5.468409 GCAACTAGGAATCAATTAGCTCCTC 59.532 44.000 0.00 0.00 39.13 3.71
81 82 5.131809 AGCAACTAGGAATCAATTAGCTCCT 59.868 40.000 0.00 6.62 41.29 3.69
82 83 5.372373 AGCAACTAGGAATCAATTAGCTCC 58.628 41.667 0.00 0.00 0.00 4.70
83 84 6.723282 CAAGCAACTAGGAATCAATTAGCTC 58.277 40.000 0.00 0.00 0.00 4.09
84 85 5.067023 GCAAGCAACTAGGAATCAATTAGCT 59.933 40.000 0.00 0.00 0.00 3.32
85 86 5.277047 GCAAGCAACTAGGAATCAATTAGC 58.723 41.667 0.00 0.00 0.00 3.09
86 87 5.294306 TCGCAAGCAACTAGGAATCAATTAG 59.706 40.000 0.00 0.00 37.18 1.73
87 88 5.182487 TCGCAAGCAACTAGGAATCAATTA 58.818 37.500 0.00 0.00 37.18 1.40
88 89 4.009675 TCGCAAGCAACTAGGAATCAATT 58.990 39.130 0.00 0.00 37.18 2.32
89 90 3.609853 TCGCAAGCAACTAGGAATCAAT 58.390 40.909 0.00 0.00 37.18 2.57
90 91 3.052455 TCGCAAGCAACTAGGAATCAA 57.948 42.857 0.00 0.00 37.18 2.57
91 92 2.760634 TCGCAAGCAACTAGGAATCA 57.239 45.000 0.00 0.00 37.18 2.57
92 93 4.419522 TTTTCGCAAGCAACTAGGAATC 57.580 40.909 0.00 0.00 37.18 2.52
93 94 5.048083 TGAATTTTCGCAAGCAACTAGGAAT 60.048 36.000 0.00 0.00 37.18 3.01
94 95 4.277174 TGAATTTTCGCAAGCAACTAGGAA 59.723 37.500 0.00 0.00 37.18 3.36
95 96 3.818210 TGAATTTTCGCAAGCAACTAGGA 59.182 39.130 0.00 0.00 37.18 2.94
96 97 3.914364 GTGAATTTTCGCAAGCAACTAGG 59.086 43.478 0.00 0.00 37.62 3.02
97 98 3.599514 CGTGAATTTTCGCAAGCAACTAG 59.400 43.478 4.88 0.00 37.55 2.57
98 99 3.550561 CGTGAATTTTCGCAAGCAACTA 58.449 40.909 4.88 0.00 37.55 2.24
99 100 2.384382 CGTGAATTTTCGCAAGCAACT 58.616 42.857 4.88 0.00 37.55 3.16
100 101 2.816974 CGTGAATTTTCGCAAGCAAC 57.183 45.000 4.88 0.00 37.55 4.17
108 109 1.323791 GGTTTCGGCGTGAATTTTCG 58.676 50.000 6.85 0.04 36.22 3.46
109 110 1.693467 GGGTTTCGGCGTGAATTTTC 58.307 50.000 6.85 0.00 36.22 2.29
110 111 0.039888 CGGGTTTCGGCGTGAATTTT 60.040 50.000 6.85 0.00 36.22 1.82
111 112 1.577421 CGGGTTTCGGCGTGAATTT 59.423 52.632 6.85 0.00 36.22 1.82
112 113 2.973316 GCGGGTTTCGGCGTGAATT 61.973 57.895 6.85 0.00 39.69 2.17
113 114 3.428282 GCGGGTTTCGGCGTGAAT 61.428 61.111 6.85 0.00 39.69 2.57
130 131 1.010125 CATATTTGGCGCGGTTCGG 60.010 57.895 8.83 0.00 38.94 4.30
131 132 1.010125 CCATATTTGGCGCGGTTCG 60.010 57.895 8.83 0.00 35.85 3.95
132 133 1.358759 CCCATATTTGGCGCGGTTC 59.641 57.895 8.83 0.00 42.15 3.62
133 134 2.781158 GCCCATATTTGGCGCGGTT 61.781 57.895 8.83 0.00 42.15 4.44
134 135 3.216292 GCCCATATTTGGCGCGGT 61.216 61.111 8.83 0.00 42.15 5.68
140 141 1.266718 CGTGAATCGGCCCATATTTGG 59.733 52.381 0.00 0.00 38.11 3.28
141 142 1.334960 GCGTGAATCGGCCCATATTTG 60.335 52.381 0.00 0.00 40.26 2.32
142 143 0.951558 GCGTGAATCGGCCCATATTT 59.048 50.000 0.00 0.00 40.26 1.40
143 144 0.179032 TGCGTGAATCGGCCCATATT 60.179 50.000 0.00 0.00 40.26 1.28
144 145 0.603707 CTGCGTGAATCGGCCCATAT 60.604 55.000 0.00 0.00 40.26 1.78
145 146 1.227527 CTGCGTGAATCGGCCCATA 60.228 57.895 0.00 0.00 40.26 2.74
146 147 2.514592 CTGCGTGAATCGGCCCAT 60.515 61.111 0.00 0.00 40.26 4.00
147 148 2.173758 TAACTGCGTGAATCGGCCCA 62.174 55.000 0.00 0.00 40.26 5.36
148 149 0.814010 ATAACTGCGTGAATCGGCCC 60.814 55.000 0.00 0.00 40.26 5.80
149 150 0.582005 GATAACTGCGTGAATCGGCC 59.418 55.000 0.00 0.00 40.26 6.13
150 151 0.229753 CGATAACTGCGTGAATCGGC 59.770 55.000 13.65 0.00 38.01 5.54
152 153 0.852777 CCCGATAACTGCGTGAATCG 59.147 55.000 14.13 14.13 40.60 3.34
153 154 0.582005 GCCCGATAACTGCGTGAATC 59.418 55.000 0.00 0.00 0.00 2.52
154 155 0.814010 GGCCCGATAACTGCGTGAAT 60.814 55.000 0.00 0.00 0.00 2.57
155 156 1.448893 GGCCCGATAACTGCGTGAA 60.449 57.895 0.00 0.00 0.00 3.18
156 157 1.966901 ATGGCCCGATAACTGCGTGA 61.967 55.000 0.00 0.00 0.00 4.35
157 158 1.095228 AATGGCCCGATAACTGCGTG 61.095 55.000 0.00 0.00 0.00 5.34
158 159 0.393808 AAATGGCCCGATAACTGCGT 60.394 50.000 0.00 0.00 0.00 5.24
159 160 0.307760 GAAATGGCCCGATAACTGCG 59.692 55.000 0.00 0.00 0.00 5.18
160 161 1.334869 CAGAAATGGCCCGATAACTGC 59.665 52.381 0.00 0.00 0.00 4.40
161 162 2.917933 TCAGAAATGGCCCGATAACTG 58.082 47.619 0.00 2.82 0.00 3.16
162 163 3.279434 GTTCAGAAATGGCCCGATAACT 58.721 45.455 0.00 0.00 0.00 2.24
163 164 3.013921 TGTTCAGAAATGGCCCGATAAC 58.986 45.455 0.00 0.00 0.00 1.89
164 165 3.358111 TGTTCAGAAATGGCCCGATAA 57.642 42.857 0.00 0.00 0.00 1.75
165 166 3.576078 ATGTTCAGAAATGGCCCGATA 57.424 42.857 0.00 0.00 0.00 2.92
166 167 2.442236 ATGTTCAGAAATGGCCCGAT 57.558 45.000 0.00 0.00 0.00 4.18
167 168 3.576078 ATATGTTCAGAAATGGCCCGA 57.424 42.857 0.00 0.00 0.00 5.14
168 169 4.362279 CAAATATGTTCAGAAATGGCCCG 58.638 43.478 0.00 0.00 0.00 6.13
169 170 4.443315 CCCAAATATGTTCAGAAATGGCCC 60.443 45.833 0.00 0.00 0.00 5.80
170 171 4.162131 ACCCAAATATGTTCAGAAATGGCC 59.838 41.667 0.00 0.00 0.00 5.36
171 172 5.343307 ACCCAAATATGTTCAGAAATGGC 57.657 39.130 0.00 0.00 0.00 4.40
172 173 5.356751 TCGACCCAAATATGTTCAGAAATGG 59.643 40.000 0.00 0.00 0.00 3.16
173 174 6.435430 TCGACCCAAATATGTTCAGAAATG 57.565 37.500 0.00 0.00 0.00 2.32
174 175 7.461182 TTTCGACCCAAATATGTTCAGAAAT 57.539 32.000 0.00 0.00 0.00 2.17
175 176 6.569610 GCTTTCGACCCAAATATGTTCAGAAA 60.570 38.462 0.00 0.00 0.00 2.52
176 177 5.106317 GCTTTCGACCCAAATATGTTCAGAA 60.106 40.000 0.00 0.00 0.00 3.02
177 178 4.394920 GCTTTCGACCCAAATATGTTCAGA 59.605 41.667 0.00 0.00 0.00 3.27
178 179 4.396166 AGCTTTCGACCCAAATATGTTCAG 59.604 41.667 0.00 0.00 0.00 3.02
179 180 4.155826 CAGCTTTCGACCCAAATATGTTCA 59.844 41.667 0.00 0.00 0.00 3.18
180 181 4.438744 CCAGCTTTCGACCCAAATATGTTC 60.439 45.833 0.00 0.00 0.00 3.18
181 182 3.443681 CCAGCTTTCGACCCAAATATGTT 59.556 43.478 0.00 0.00 0.00 2.71
182 183 3.016736 CCAGCTTTCGACCCAAATATGT 58.983 45.455 0.00 0.00 0.00 2.29
183 184 2.358898 CCCAGCTTTCGACCCAAATATG 59.641 50.000 0.00 0.00 0.00 1.78
184 185 2.654863 CCCAGCTTTCGACCCAAATAT 58.345 47.619 0.00 0.00 0.00 1.28
185 186 1.953311 GCCCAGCTTTCGACCCAAATA 60.953 52.381 0.00 0.00 0.00 1.40
186 187 1.250840 GCCCAGCTTTCGACCCAAAT 61.251 55.000 0.00 0.00 0.00 2.32
187 188 1.901464 GCCCAGCTTTCGACCCAAA 60.901 57.895 0.00 0.00 0.00 3.28
188 189 2.282180 GCCCAGCTTTCGACCCAA 60.282 61.111 0.00 0.00 0.00 4.12
189 190 3.249189 AGCCCAGCTTTCGACCCA 61.249 61.111 0.00 0.00 33.89 4.51
190 191 2.747855 CAGCCCAGCTTTCGACCC 60.748 66.667 0.00 0.00 36.40 4.46
191 192 0.678048 ATTCAGCCCAGCTTTCGACC 60.678 55.000 0.00 0.00 36.40 4.79
192 193 1.131315 GAATTCAGCCCAGCTTTCGAC 59.869 52.381 0.00 0.00 36.40 4.20
193 194 1.453155 GAATTCAGCCCAGCTTTCGA 58.547 50.000 0.00 0.00 36.40 3.71
194 195 0.097674 CGAATTCAGCCCAGCTTTCG 59.902 55.000 6.22 7.31 39.06 3.46
195 196 0.453390 CCGAATTCAGCCCAGCTTTC 59.547 55.000 6.22 0.00 36.40 2.62
196 197 1.598701 GCCGAATTCAGCCCAGCTTT 61.599 55.000 6.22 0.00 36.40 3.51
197 198 2.048603 GCCGAATTCAGCCCAGCTT 61.049 57.895 6.22 0.00 36.40 3.74
198 199 2.439156 GCCGAATTCAGCCCAGCT 60.439 61.111 6.22 0.00 40.77 4.24
199 200 3.880846 CGCCGAATTCAGCCCAGC 61.881 66.667 8.06 0.00 0.00 4.85
200 201 3.880846 GCGCCGAATTCAGCCCAG 61.881 66.667 8.06 0.00 0.00 4.45
204 205 3.880846 CCAGGCGCCGAATTCAGC 61.881 66.667 23.20 4.78 0.00 4.26
205 206 3.204827 CCCAGGCGCCGAATTCAG 61.205 66.667 23.20 5.59 0.00 3.02
206 207 4.794648 CCCCAGGCGCCGAATTCA 62.795 66.667 23.20 0.00 0.00 2.57
256 257 1.515521 GATAAAATCGGCGCTGGGGG 61.516 60.000 17.88 0.00 0.00 5.40
257 258 0.817634 TGATAAAATCGGCGCTGGGG 60.818 55.000 17.88 0.00 0.00 4.96
258 259 0.307760 GTGATAAAATCGGCGCTGGG 59.692 55.000 17.88 1.40 0.00 4.45
259 260 0.307760 GGTGATAAAATCGGCGCTGG 59.692 55.000 17.88 4.31 0.00 4.85
260 261 0.042188 CGGTGATAAAATCGGCGCTG 60.042 55.000 10.86 10.86 0.00 5.18
261 262 1.157870 CCGGTGATAAAATCGGCGCT 61.158 55.000 7.64 0.00 35.95 5.92
262 263 1.155424 TCCGGTGATAAAATCGGCGC 61.155 55.000 0.00 0.00 41.98 6.53
263 264 0.859232 CTCCGGTGATAAAATCGGCG 59.141 55.000 0.00 0.00 41.98 6.46
264 265 0.586802 GCTCCGGTGATAAAATCGGC 59.413 55.000 7.92 0.00 41.98 5.54
265 266 1.597663 GTGCTCCGGTGATAAAATCGG 59.402 52.381 7.92 0.00 43.42 4.18
266 267 2.540101 GAGTGCTCCGGTGATAAAATCG 59.460 50.000 7.92 0.00 0.00 3.34
267 268 3.798202 AGAGTGCTCCGGTGATAAAATC 58.202 45.455 7.92 0.00 0.00 2.17
268 269 3.197766 TGAGAGTGCTCCGGTGATAAAAT 59.802 43.478 7.92 0.00 40.55 1.82
269 270 2.565391 TGAGAGTGCTCCGGTGATAAAA 59.435 45.455 7.92 0.00 40.55 1.52
270 271 2.166459 CTGAGAGTGCTCCGGTGATAAA 59.834 50.000 7.92 0.00 40.55 1.40
271 272 1.751351 CTGAGAGTGCTCCGGTGATAA 59.249 52.381 7.92 0.00 40.55 1.75
272 273 1.393603 CTGAGAGTGCTCCGGTGATA 58.606 55.000 7.92 0.00 40.55 2.15
273 274 1.326213 CCTGAGAGTGCTCCGGTGAT 61.326 60.000 7.92 0.00 39.79 3.06
274 275 1.979155 CCTGAGAGTGCTCCGGTGA 60.979 63.158 7.92 0.00 39.79 4.02
275 276 1.979155 TCCTGAGAGTGCTCCGGTG 60.979 63.158 0.00 0.00 43.67 4.94
276 277 1.979693 GTCCTGAGAGTGCTCCGGT 60.980 63.158 0.00 0.00 43.67 5.28
277 278 2.888863 GTCCTGAGAGTGCTCCGG 59.111 66.667 0.00 0.00 44.35 5.14
278 279 2.487428 CGTCCTGAGAGTGCTCCG 59.513 66.667 0.00 0.00 40.55 4.63
279 280 2.183046 GCGTCCTGAGAGTGCTCC 59.817 66.667 0.00 0.00 40.55 4.70
280 281 1.138671 GAGCGTCCTGAGAGTGCTC 59.861 63.158 4.53 4.53 41.72 4.26
281 282 0.897863 AAGAGCGTCCTGAGAGTGCT 60.898 55.000 0.00 0.00 37.56 4.40
282 283 0.037790 AAAGAGCGTCCTGAGAGTGC 60.038 55.000 0.00 0.00 0.00 4.40
283 284 2.447244 AAAAGAGCGTCCTGAGAGTG 57.553 50.000 0.00 0.00 0.00 3.51
284 285 2.608261 CGAAAAAGAGCGTCCTGAGAGT 60.608 50.000 0.00 0.00 0.00 3.24
285 286 1.989165 CGAAAAAGAGCGTCCTGAGAG 59.011 52.381 0.00 0.00 0.00 3.20
286 287 1.611977 TCGAAAAAGAGCGTCCTGAGA 59.388 47.619 0.00 0.00 0.00 3.27
287 288 1.721926 GTCGAAAAAGAGCGTCCTGAG 59.278 52.381 0.00 0.00 0.00 3.35
288 289 1.779569 GTCGAAAAAGAGCGTCCTGA 58.220 50.000 0.00 0.00 0.00 3.86
289 290 0.435008 CGTCGAAAAAGAGCGTCCTG 59.565 55.000 0.00 0.00 0.00 3.86
290 291 1.282930 GCGTCGAAAAAGAGCGTCCT 61.283 55.000 0.00 0.00 0.00 3.85
291 292 1.130009 GCGTCGAAAAAGAGCGTCC 59.870 57.895 0.00 0.00 0.00 4.79
292 293 1.130009 GGCGTCGAAAAAGAGCGTC 59.870 57.895 0.00 0.00 0.00 5.19
293 294 2.315386 GGGCGTCGAAAAAGAGCGT 61.315 57.895 0.00 0.00 0.00 5.07
294 295 2.027625 AGGGCGTCGAAAAAGAGCG 61.028 57.895 0.00 0.00 0.00 5.03
295 296 1.497722 CAGGGCGTCGAAAAAGAGC 59.502 57.895 0.00 0.00 0.00 4.09
296 297 1.298859 CCCAGGGCGTCGAAAAAGAG 61.299 60.000 0.00 0.00 0.00 2.85
297 298 1.302192 CCCAGGGCGTCGAAAAAGA 60.302 57.895 0.00 0.00 0.00 2.52
298 299 2.332654 CCCCAGGGCGTCGAAAAAG 61.333 63.158 0.00 0.00 0.00 2.27
299 300 2.281900 CCCCAGGGCGTCGAAAAA 60.282 61.111 0.00 0.00 0.00 1.94
300 301 4.338710 CCCCCAGGGCGTCGAAAA 62.339 66.667 0.00 0.00 35.35 2.29
320 321 1.958205 GAGCATCTCCGGCCATTCG 60.958 63.158 2.24 0.00 0.00 3.34
321 322 4.055654 GAGCATCTCCGGCCATTC 57.944 61.111 2.24 0.00 0.00 2.67
332 333 2.278854 GTTCTCCAAGCTCAGAGCATC 58.721 52.381 24.64 0.00 45.56 3.91
333 334 1.065564 GGTTCTCCAAGCTCAGAGCAT 60.066 52.381 24.64 10.10 45.56 3.79
334 335 0.322975 GGTTCTCCAAGCTCAGAGCA 59.677 55.000 24.64 2.43 45.56 4.26
335 336 0.322975 TGGTTCTCCAAGCTCAGAGC 59.677 55.000 15.25 15.25 41.25 4.09
380 381 6.802834 GGTCTCTCGGATTAAGACGATTATTC 59.197 42.308 4.97 0.00 40.25 1.75
390 402 3.024547 TGGTGAGGTCTCTCGGATTAAG 58.975 50.000 0.00 0.00 42.79 1.85
395 407 1.241990 CGTTGGTGAGGTCTCTCGGA 61.242 60.000 0.00 0.00 42.79 4.55
450 462 5.584649 TCGATGTCACTGAATGGGAAAATAC 59.415 40.000 0.00 0.00 0.00 1.89
474 486 4.790123 GCTTCGAGCATACACGTCTCTTAT 60.790 45.833 0.00 0.00 41.89 1.73
510 522 0.537143 TTCACGTTGGATGCCAGCTT 60.537 50.000 0.00 0.00 33.81 3.74
579 591 1.227147 AGTTGGACACGACGTGGTG 60.227 57.895 29.86 26.49 43.54 4.17
586 598 0.762418 ATGGAACCAGTTGGACACGA 59.238 50.000 4.92 0.00 38.94 4.35
600 612 1.425066 AGACAAGGTGCTGGAATGGAA 59.575 47.619 0.00 0.00 0.00 3.53
773 785 7.485418 AACTCGTGTACAAATACAATTGTGA 57.515 32.000 21.42 5.83 42.99 3.58
1011 1024 2.445845 CGCCTGGAGGTGGGGATA 60.446 66.667 0.00 0.00 41.84 2.59
1330 1344 3.207354 GCGATGGAGTCTTCGGGA 58.793 61.111 14.79 0.00 39.83 5.14
1331 1345 2.278857 CGCGATGGAGTCTTCGGG 60.279 66.667 0.00 14.84 43.12 5.14
1403 1431 0.322322 CGTACAACTACAGGCCCCAA 59.678 55.000 0.00 0.00 0.00 4.12
1409 1437 2.729882 GCACAAGTCGTACAACTACAGG 59.270 50.000 0.00 0.00 0.00 4.00
1424 1452 3.994392 ACGAGGTAACACAATAGCACAAG 59.006 43.478 0.00 0.00 41.41 3.16
1444 1472 1.529438 TGAAAGAAGCGGCACTAAACG 59.471 47.619 1.45 0.00 0.00 3.60
1475 1503 0.454600 TGAGACCTAACCGCGTCATC 59.545 55.000 4.92 0.00 0.00 2.92
1566 1594 2.846039 ATACGACTAGAAGGCACACG 57.154 50.000 0.00 0.00 0.00 4.49
1605 1633 2.866762 CACTAACTGAATTCGCCTAGGC 59.133 50.000 24.75 24.75 37.85 3.93
1716 1756 2.035449 GCCTTGTAAAAAGTCCCACCAC 59.965 50.000 0.00 0.00 0.00 4.16
1780 1820 0.968901 TGCCTGGGAGTACACGGTAG 60.969 60.000 0.00 0.00 0.00 3.18
1782 1822 1.827399 CTTGCCTGGGAGTACACGGT 61.827 60.000 0.00 0.00 0.00 4.83
1807 1847 6.035112 GCAACTCTGTAGTAGTGCTGAATAAC 59.965 42.308 0.00 0.00 36.79 1.89
1853 1893 2.732412 TTGGTGTTTGTGTGTGTTGG 57.268 45.000 0.00 0.00 0.00 3.77
1854 1894 5.604010 AAATTTGGTGTTTGTGTGTGTTG 57.396 34.783 0.00 0.00 0.00 3.33
1865 1905 8.755028 AGTAGGAAAGTACAAAAATTTGGTGTT 58.245 29.630 11.76 1.66 42.34 3.32
1866 1906 8.301252 AGTAGGAAAGTACAAAAATTTGGTGT 57.699 30.769 10.38 11.36 42.34 4.16
1924 1967 3.504906 ACCAACATCATGCAGAAGTCAAG 59.495 43.478 0.00 0.00 0.00 3.02
1926 1969 3.144657 ACCAACATCATGCAGAAGTCA 57.855 42.857 0.00 0.00 0.00 3.41
1971 2014 3.508845 AACTCACCCTATGCACAAACT 57.491 42.857 0.00 0.00 0.00 2.66
2096 2141 5.007136 GCCCTCTCAAAAACATCTATCGAAG 59.993 44.000 0.00 0.00 0.00 3.79
2099 2144 4.191544 TGCCCTCTCAAAAACATCTATCG 58.808 43.478 0.00 0.00 0.00 2.92
2355 2401 7.741027 AGCATCCATAAGTGAATACTGAATG 57.259 36.000 0.00 0.00 37.19 2.67
2493 2539 4.843728 ACTTGAGATTTAAAGGGCGATGA 58.156 39.130 0.00 0.00 0.00 2.92
2562 2609 5.923204 AGAAGAGAAAGAGAAGAACAAGCA 58.077 37.500 0.00 0.00 0.00 3.91
2694 2741 1.313772 ACAATAAACTGCGCACACCA 58.686 45.000 5.66 0.00 0.00 4.17
2698 2745 3.560503 TGCTTTACAATAAACTGCGCAC 58.439 40.909 5.66 0.00 0.00 5.34
2840 2888 8.870075 ATAATCCAGCTAGAAAAACAGACTTT 57.130 30.769 0.00 0.00 0.00 2.66
2942 2990 5.779806 AGCGTGTTCATTATACACTTGAC 57.220 39.130 0.00 0.00 42.83 3.18
2962 3011 3.328050 AGCCTATAAGGGTGTCCAATAGC 59.672 47.826 0.00 0.00 45.86 2.97
3103 3152 2.782163 CGTTTGATCTCTTCTCGCGTA 58.218 47.619 5.77 0.00 0.00 4.42
3204 3253 4.875544 TCGAAGTGGAAAGTTTCTGTTG 57.124 40.909 15.05 3.24 0.00 3.33
3730 4995 6.098266 AGCCACAAACTTAGACCTGAATTTTT 59.902 34.615 0.00 0.00 0.00 1.94
3761 5026 7.865706 ACGAAGCAAACCTAAAGATATGATT 57.134 32.000 0.00 0.00 0.00 2.57
3907 5172 5.710567 AGTTGGTCTTAATAGGAAACAAGCC 59.289 40.000 0.00 0.00 0.00 4.35
4237 5502 0.179073 GCGCTTAGAAGATGGCTCCA 60.179 55.000 0.00 0.00 0.00 3.86
5140 6405 9.886132 AGAAACATAGATTATTAACACGGTCTT 57.114 29.630 0.00 0.00 0.00 3.01
5201 6466 6.992123 TGTCTGCTAGGATATGTGGTTAAATG 59.008 38.462 0.00 0.00 0.00 2.32
5206 6471 5.636903 AATGTCTGCTAGGATATGTGGTT 57.363 39.130 0.00 0.00 0.00 3.67
5207 6472 6.942163 ATAATGTCTGCTAGGATATGTGGT 57.058 37.500 0.00 0.00 0.00 4.16
5348 6969 0.454957 CGCATGTACCAGCAAGTTGC 60.455 55.000 20.44 20.44 45.46 4.17
5444 7065 5.850557 TTGGCTTTTCATTCAAGTTCTCA 57.149 34.783 0.00 0.00 0.00 3.27
5512 7133 9.709495 TGAAAAGAAATATTCCATTGGAAAGTG 57.291 29.630 21.52 0.00 45.41 3.16
5851 7472 5.948992 ATGAACTAGAAACTGCAAGGAAC 57.051 39.130 0.00 0.00 39.30 3.62
5989 7610 7.226523 ACCTTCAAACAAAATTGGCAGATAAAC 59.773 33.333 0.00 0.00 0.00 2.01
6040 7661 2.542020 TGTTGAAATGGCGAGACAGA 57.458 45.000 0.00 0.00 0.00 3.41
6183 7805 8.234887 TCGTGTAATGTGATGTAAGTAACAAG 57.765 34.615 0.00 0.00 42.70 3.16
6214 7836 1.216977 CCACAGCCACCATGCAATG 59.783 57.895 0.00 0.00 46.21 2.82
6409 8031 7.055667 TCCTTTTGTGTACAATTTGCCATAA 57.944 32.000 0.00 0.00 35.55 1.90
6503 8126 1.070376 GTGTCGTGGTTTTAGTTCGGC 60.070 52.381 0.00 0.00 0.00 5.54
6574 8197 7.834881 AATATTGCTGATGAGGATGTTTGAT 57.165 32.000 0.00 0.00 0.00 2.57
6604 8227 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
6605 8228 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
6606 8229 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
6607 8230 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
6608 8231 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
6609 8232 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
6610 8233 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
6611 8234 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
6612 8235 6.127758 CCAATTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
6613 8236 6.035843 CCAATTTGATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
6614 8237 6.851609 TCCAATTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
6621 8244 8.526147 CCTCTTTTATCCAATTTGATGACAAGT 58.474 33.333 2.33 0.00 37.32 3.16
6622 8245 8.742777 TCCTCTTTTATCCAATTTGATGACAAG 58.257 33.333 2.33 2.68 37.32 3.16
6623 8246 8.648698 TCCTCTTTTATCCAATTTGATGACAA 57.351 30.769 2.33 0.00 0.00 3.18
6624 8247 8.689061 CATCCTCTTTTATCCAATTTGATGACA 58.311 33.333 2.33 0.00 0.00 3.58
6625 8248 8.689972 ACATCCTCTTTTATCCAATTTGATGAC 58.310 33.333 2.33 0.00 32.39 3.06
6626 8249 8.827832 ACATCCTCTTTTATCCAATTTGATGA 57.172 30.769 2.33 0.00 32.39 2.92
6635 8258 9.607333 ACATCTAGATACATCCTCTTTTATCCA 57.393 33.333 4.54 0.00 0.00 3.41
6681 8304 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
6688 8311 9.045223 CGAGAATACTTGTCATCAAAATGGATA 57.955 33.333 0.00 0.00 33.42 2.59
6689 8312 7.012704 CCGAGAATACTTGTCATCAAAATGGAT 59.987 37.037 0.00 0.00 33.42 3.41
6690 8313 6.316140 CCGAGAATACTTGTCATCAAAATGGA 59.684 38.462 0.00 0.00 33.42 3.41
6691 8314 6.316140 TCCGAGAATACTTGTCATCAAAATGG 59.684 38.462 0.00 0.00 33.42 3.16
6692 8315 7.182761 GTCCGAGAATACTTGTCATCAAAATG 58.817 38.462 0.00 0.00 32.87 2.32
6693 8316 6.036083 CGTCCGAGAATACTTGTCATCAAAAT 59.964 38.462 0.00 0.00 32.87 1.82
6694 8317 5.347635 CGTCCGAGAATACTTGTCATCAAAA 59.652 40.000 0.00 0.00 32.87 2.44
6695 8318 4.862574 CGTCCGAGAATACTTGTCATCAAA 59.137 41.667 0.00 0.00 32.87 2.69
6696 8319 4.421058 CGTCCGAGAATACTTGTCATCAA 58.579 43.478 0.00 0.00 0.00 2.57
6697 8320 3.181490 CCGTCCGAGAATACTTGTCATCA 60.181 47.826 0.00 0.00 0.00 3.07
6698 8321 3.066342 TCCGTCCGAGAATACTTGTCATC 59.934 47.826 0.00 0.00 0.00 2.92
6699 8322 3.021695 TCCGTCCGAGAATACTTGTCAT 58.978 45.455 0.00 0.00 0.00 3.06
6700 8323 2.422479 CTCCGTCCGAGAATACTTGTCA 59.578 50.000 0.00 0.00 41.63 3.58
6701 8324 2.223525 CCTCCGTCCGAGAATACTTGTC 60.224 54.545 0.00 0.00 41.63 3.18
6702 8325 1.749634 CCTCCGTCCGAGAATACTTGT 59.250 52.381 0.00 0.00 41.63 3.16
6703 8326 1.067212 CCCTCCGTCCGAGAATACTTG 59.933 57.143 0.00 0.00 41.63 3.16
6704 8327 1.064166 TCCCTCCGTCCGAGAATACTT 60.064 52.381 0.00 0.00 41.63 2.24
6705 8328 0.549950 TCCCTCCGTCCGAGAATACT 59.450 55.000 0.00 0.00 41.63 2.12
6706 8329 0.953003 CTCCCTCCGTCCGAGAATAC 59.047 60.000 0.00 0.00 41.63 1.89
6707 8330 0.549950 ACTCCCTCCGTCCGAGAATA 59.450 55.000 0.00 0.00 41.63 1.75
6708 8331 0.549950 TACTCCCTCCGTCCGAGAAT 59.450 55.000 0.00 0.00 41.63 2.40
6709 8332 0.107312 CTACTCCCTCCGTCCGAGAA 60.107 60.000 0.00 0.00 41.63 2.87
6710 8333 0.979709 TCTACTCCCTCCGTCCGAGA 60.980 60.000 0.00 0.00 41.63 4.04
6711 8334 0.107312 TTCTACTCCCTCCGTCCGAG 60.107 60.000 0.00 0.00 38.46 4.63
6712 8335 0.107312 CTTCTACTCCCTCCGTCCGA 60.107 60.000 0.00 0.00 0.00 4.55
6713 8336 0.394080 ACTTCTACTCCCTCCGTCCG 60.394 60.000 0.00 0.00 0.00 4.79
6714 8337 1.849977 AACTTCTACTCCCTCCGTCC 58.150 55.000 0.00 0.00 0.00 4.79
6715 8338 3.377798 CAGTAACTTCTACTCCCTCCGTC 59.622 52.174 0.00 0.00 0.00 4.79
6716 8339 3.354467 CAGTAACTTCTACTCCCTCCGT 58.646 50.000 0.00 0.00 0.00 4.69
6717 8340 2.688958 CCAGTAACTTCTACTCCCTCCG 59.311 54.545 0.00 0.00 0.00 4.63
6718 8341 2.431419 GCCAGTAACTTCTACTCCCTCC 59.569 54.545 0.00 0.00 0.00 4.30
6719 8342 3.097614 TGCCAGTAACTTCTACTCCCTC 58.902 50.000 0.00 0.00 0.00 4.30
6720 8343 2.832733 GTGCCAGTAACTTCTACTCCCT 59.167 50.000 0.00 0.00 0.00 4.20
6721 8344 2.832733 AGTGCCAGTAACTTCTACTCCC 59.167 50.000 0.00 0.00 0.00 4.30
6722 8345 3.510360 TCAGTGCCAGTAACTTCTACTCC 59.490 47.826 0.00 0.00 0.00 3.85
6723 8346 4.381079 CCTCAGTGCCAGTAACTTCTACTC 60.381 50.000 0.00 0.00 0.00 2.59
6724 8347 3.511934 CCTCAGTGCCAGTAACTTCTACT 59.488 47.826 0.00 0.00 0.00 2.57
6725 8348 3.510360 TCCTCAGTGCCAGTAACTTCTAC 59.490 47.826 0.00 0.00 0.00 2.59
6726 8349 3.774734 TCCTCAGTGCCAGTAACTTCTA 58.225 45.455 0.00 0.00 0.00 2.10
6727 8350 2.609747 TCCTCAGTGCCAGTAACTTCT 58.390 47.619 0.00 0.00 0.00 2.85
6728 8351 3.402628 TTCCTCAGTGCCAGTAACTTC 57.597 47.619 0.00 0.00 0.00 3.01
6738 8361 2.221981 CGACTTGTTCTTTCCTCAGTGC 59.778 50.000 0.00 0.00 0.00 4.40
6791 8414 3.856521 TCCAAATTGCACGCAAATAATCG 59.143 39.130 8.76 0.00 39.55 3.34
6855 8479 8.875803 GCAATTCAAATGGGCATATACAATATG 58.124 33.333 3.08 3.08 0.00 1.78
7178 8803 5.989777 TCAGCTTCTACTTGAGTACCAAAAC 59.010 40.000 0.00 0.00 33.76 2.43
7293 8918 2.093235 TGTTCAAAGGCAACCCAAAAGG 60.093 45.455 0.00 0.00 43.78 3.11
7309 8936 2.618241 AGAAGCTTTCGCAATGTGTTCA 59.382 40.909 0.00 0.00 39.10 3.18
7310 8937 2.975851 CAGAAGCTTTCGCAATGTGTTC 59.024 45.455 0.00 0.00 39.10 3.18
7511 9138 2.743183 GCACCTGCTTTCATCGGAGTAT 60.743 50.000 0.00 0.00 38.21 2.12
7830 9457 2.285442 CTCCGGGTCCCTTTCCCT 60.285 66.667 6.29 0.00 42.56 4.20
7913 9544 5.316167 ACTGATGAAAACTGCTTGGTATGA 58.684 37.500 0.00 0.00 0.00 2.15
7973 9604 4.037923 CCACCAATACAACTTCAAAGCTGT 59.962 41.667 4.40 4.40 38.71 4.40
7981 9612 4.037446 TGAAGCAACCACCAATACAACTTC 59.963 41.667 0.00 0.00 33.36 3.01
7982 9613 3.957497 TGAAGCAACCACCAATACAACTT 59.043 39.130 0.00 0.00 0.00 2.66
7983 9614 3.561143 TGAAGCAACCACCAATACAACT 58.439 40.909 0.00 0.00 0.00 3.16
8005 9636 0.680061 AGTCCGAAACCAGTCCTCAC 59.320 55.000 0.00 0.00 0.00 3.51
8020 9651 2.505405 GTCCTCCTTTTGGTCAAGTCC 58.495 52.381 0.00 0.00 41.38 3.85
8021 9652 2.505405 GGTCCTCCTTTTGGTCAAGTC 58.495 52.381 0.00 0.00 41.38 3.01
8173 9808 9.482175 AGGAAATAACAGAGACATAAGACTACT 57.518 33.333 0.00 0.00 0.00 2.57
8285 9922 5.589452 AGAACGTTGTTACACCCAAATGTAA 59.411 36.000 5.00 0.00 41.63 2.41
8286 9923 5.007823 CAGAACGTTGTTACACCCAAATGTA 59.992 40.000 5.00 0.00 33.85 2.29
8304 9941 1.966451 GGCAGGGTGTTCCAGAACG 60.966 63.158 6.08 0.00 43.94 3.95
8362 9999 3.084536 TGCCAGATAGCCAATTCACAA 57.915 42.857 0.00 0.00 0.00 3.33
8375 10012 0.178961 ATGGATGCTGCATGCCAGAT 60.179 50.000 27.65 14.29 44.64 2.90
8414 11153 3.319405 ACAGATCAGCCAGGATAACTACG 59.681 47.826 0.00 0.00 0.00 3.51
8415 11154 4.100189 ACACAGATCAGCCAGGATAACTAC 59.900 45.833 0.00 0.00 0.00 2.73
8434 11213 3.758755 AGCAGACTGATGAAGAACACA 57.241 42.857 6.65 0.00 0.00 3.72
8605 11441 6.109359 GTGATCTTGGAGTGCTTACAAGTAT 58.891 40.000 11.81 6.21 41.64 2.12
8717 11553 1.326852 CATAGTCTGAGCAGCTTTGCG 59.673 52.381 0.00 0.00 40.27 4.85
8754 11590 1.768275 TGATCTGCCGTATCATGGGTT 59.232 47.619 0.00 0.00 0.00 4.11
8755 11591 1.423584 TGATCTGCCGTATCATGGGT 58.576 50.000 0.00 0.00 0.00 4.51
8768 11604 2.185262 CACCGACGTGTGTATGATCTG 58.815 52.381 0.00 0.00 35.10 2.90
8770 11606 1.133598 TCCACCGACGTGTGTATGATC 59.866 52.381 13.14 0.00 38.41 2.92
8775 11611 2.270257 CCCTCCACCGACGTGTGTA 61.270 63.158 13.14 0.25 38.41 2.90
8780 11616 2.989824 CACTCCCTCCACCGACGT 60.990 66.667 0.00 0.00 0.00 4.34
8781 11617 2.675423 TCACTCCCTCCACCGACG 60.675 66.667 0.00 0.00 0.00 5.12
8782 11618 2.352032 CCTCACTCCCTCCACCGAC 61.352 68.421 0.00 0.00 0.00 4.79
8783 11619 2.037367 CCTCACTCCCTCCACCGA 59.963 66.667 0.00 0.00 0.00 4.69
8784 11620 3.077556 CCCTCACTCCCTCCACCG 61.078 72.222 0.00 0.00 0.00 4.94
8785 11621 1.687493 CTCCCTCACTCCCTCCACC 60.687 68.421 0.00 0.00 0.00 4.61
8786 11622 0.973496 GTCTCCCTCACTCCCTCCAC 60.973 65.000 0.00 0.00 0.00 4.02
8787 11623 1.149782 AGTCTCCCTCACTCCCTCCA 61.150 60.000 0.00 0.00 0.00 3.86
8788 11624 0.686112 CAGTCTCCCTCACTCCCTCC 60.686 65.000 0.00 0.00 0.00 4.30
8789 11625 1.326951 GCAGTCTCCCTCACTCCCTC 61.327 65.000 0.00 0.00 0.00 4.30
8790 11626 1.305718 GCAGTCTCCCTCACTCCCT 60.306 63.158 0.00 0.00 0.00 4.20
8791 11627 1.610673 TGCAGTCTCCCTCACTCCC 60.611 63.158 0.00 0.00 0.00 4.30
8792 11628 1.594310 GTGCAGTCTCCCTCACTCC 59.406 63.158 0.00 0.00 0.00 3.85
8793 11629 1.214062 CGTGCAGTCTCCCTCACTC 59.786 63.158 0.00 0.00 0.00 3.51
8794 11630 2.936912 GCGTGCAGTCTCCCTCACT 61.937 63.158 0.00 0.00 0.00 3.41
8795 11631 2.433318 GCGTGCAGTCTCCCTCAC 60.433 66.667 0.00 0.00 0.00 3.51
8796 11632 4.056125 CGCGTGCAGTCTCCCTCA 62.056 66.667 0.00 0.00 0.00 3.86
8797 11633 2.945398 GATCGCGTGCAGTCTCCCTC 62.945 65.000 5.77 0.00 0.00 4.30
8798 11634 3.069980 GATCGCGTGCAGTCTCCCT 62.070 63.158 5.77 0.00 0.00 4.20
8799 11635 2.583593 GATCGCGTGCAGTCTCCC 60.584 66.667 5.77 0.00 0.00 4.30
8800 11636 1.875813 CTGATCGCGTGCAGTCTCC 60.876 63.158 18.27 0.00 0.00 3.71
8801 11637 1.875813 CCTGATCGCGTGCAGTCTC 60.876 63.158 22.39 5.81 0.00 3.36
8802 11638 2.182791 CCTGATCGCGTGCAGTCT 59.817 61.111 22.39 0.00 0.00 3.24
8803 11639 1.875813 CTCCTGATCGCGTGCAGTC 60.876 63.158 22.39 9.62 0.00 3.51
8804 11640 2.182791 CTCCTGATCGCGTGCAGT 59.817 61.111 22.39 1.35 0.00 4.40
8805 11641 1.588403 CTCTCCTGATCGCGTGCAG 60.588 63.158 19.16 19.16 0.00 4.41
8806 11642 2.491621 CTCTCCTGATCGCGTGCA 59.508 61.111 5.77 4.61 0.00 4.57
8807 11643 2.959071 GCTCTCCTGATCGCGTGC 60.959 66.667 5.77 0.00 0.00 5.34
8808 11644 2.279120 GGCTCTCCTGATCGCGTG 60.279 66.667 5.77 0.00 0.00 5.34
8809 11645 3.532155 GGGCTCTCCTGATCGCGT 61.532 66.667 5.77 0.00 0.00 6.01
8810 11646 4.637489 CGGGCTCTCCTGATCGCG 62.637 72.222 0.00 0.00 41.45 5.87
8811 11647 4.959596 GCGGGCTCTCCTGATCGC 62.960 72.222 0.00 0.00 41.45 4.58
8812 11648 4.637489 CGCGGGCTCTCCTGATCG 62.637 72.222 0.00 0.00 41.45 3.69
8813 11649 4.292178 CCGCGGGCTCTCCTGATC 62.292 72.222 20.10 0.00 41.45 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.