Multiple sequence alignment - TraesCS7B01G144600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G144600 chr7B 100.000 4571 0 0 1 4571 186862572 186867142 0.000000e+00 8442.0
1 TraesCS7B01G144600 chr7B 100.000 107 0 0 580 686 134635186 134635080 1.000000e-46 198.0
2 TraesCS7B01G144600 chr7D 95.703 1280 47 5 1481 2756 214337206 214335931 0.000000e+00 2052.0
3 TraesCS7B01G144600 chr7D 94.180 1220 41 10 2758 3951 214335740 214334525 0.000000e+00 1832.0
4 TraesCS7B01G144600 chr7D 90.256 626 30 11 869 1472 214339198 214338582 0.000000e+00 789.0
5 TraesCS7B01G144600 chr7D 86.051 552 58 10 2 536 214341038 214340489 3.970000e-160 575.0
6 TraesCS7B01G144600 chr7D 93.846 195 9 3 685 879 214339420 214339229 1.610000e-74 291.0
7 TraesCS7B01G144600 chr7D 90.476 147 7 3 4112 4251 214334526 214334380 2.170000e-43 187.0
8 TraesCS7B01G144600 chr7A 95.234 1259 46 6 2696 3951 226719661 226718414 0.000000e+00 1980.0
9 TraesCS7B01G144600 chr7A 94.541 1154 58 5 1481 2630 226721212 226720060 0.000000e+00 1777.0
10 TraesCS7B01G144600 chr7A 92.691 602 36 4 869 1468 226722022 226721427 0.000000e+00 861.0
11 TraesCS7B01G144600 chr7A 85.714 476 49 11 113 581 226722695 226722232 6.880000e-133 484.0
12 TraesCS7B01G144600 chr7A 92.308 299 14 4 4112 4405 226718415 226718121 2.540000e-112 416.0
13 TraesCS7B01G144600 chr7A 83.838 198 13 4 685 879 226722233 226722052 2.190000e-38 171.0
14 TraesCS7B01G144600 chr7A 88.372 86 8 2 4405 4488 166333631 166333546 8.090000e-18 102.0
15 TraesCS7B01G144600 chr1B 97.076 171 4 1 3947 4116 268402696 268402866 2.080000e-73 287.0
16 TraesCS7B01G144600 chr5A 94.536 183 8 2 3935 4115 290391681 290391863 9.680000e-72 281.0
17 TraesCS7B01G144600 chr5A 89.024 82 9 0 4402 4483 4008988 4009069 8.090000e-18 102.0
18 TraesCS7B01G144600 chr3A 95.480 177 6 2 3939 4114 705529401 705529226 9.680000e-72 281.0
19 TraesCS7B01G144600 chr3A 95.726 117 5 0 577 693 654060037 654059921 6.040000e-44 189.0
20 TraesCS7B01G144600 chr3A 71.933 595 137 16 1 581 640842117 640842695 3.690000e-31 147.0
21 TraesCS7B01G144600 chr3A 86.916 107 12 1 4384 4490 675873028 675873132 8.030000e-23 119.0
22 TraesCS7B01G144600 chr2A 95.000 180 6 3 3936 4115 478761347 478761523 3.480000e-71 279.0
23 TraesCS7B01G144600 chrUn 94.475 181 8 2 3947 4126 36763664 36763843 1.250000e-70 278.0
24 TraesCS7B01G144600 chr4B 95.930 172 6 1 3943 4113 143898156 143897985 1.250000e-70 278.0
25 TraesCS7B01G144600 chr4B 93.583 187 8 4 3944 4127 424705062 424705247 4.500000e-70 276.0
26 TraesCS7B01G144600 chr4B 94.958 119 6 0 580 698 522075430 522075312 2.170000e-43 187.0
27 TraesCS7B01G144600 chr6A 92.708 192 10 4 3950 4140 560082598 560082786 1.620000e-69 274.0
28 TraesCS7B01G144600 chr6A 97.391 115 3 0 575 689 408886072 408886186 3.610000e-46 196.0
29 TraesCS7B01G144600 chr5D 90.291 206 14 6 3919 4122 181626304 181626103 9.750000e-67 265.0
30 TraesCS7B01G144600 chr5D 87.850 107 13 0 4384 4490 399614677 399614571 4.800000e-25 126.0
31 TraesCS7B01G144600 chr6B 100.000 110 0 0 577 686 15270460 15270351 2.160000e-48 204.0
32 TraesCS7B01G144600 chr6B 74.638 138 30 4 290 423 8793620 8793484 6.390000e-04 56.5
33 TraesCS7B01G144600 chr2B 96.694 121 3 1 3505 3624 229995161 229995041 2.790000e-47 200.0
34 TraesCS7B01G144600 chr2B 85.217 115 17 0 4376 4490 175632679 175632793 8.030000e-23 119.0
35 TraesCS7B01G144600 chr4A 96.552 116 4 0 578 693 715367587 715367472 4.670000e-45 193.0
36 TraesCS7B01G144600 chr1A 95.763 118 3 2 580 696 119717403 119717287 6.040000e-44 189.0
37 TraesCS7B01G144600 chr1A 74.286 385 79 16 205 581 548667973 548667601 1.330000e-30 145.0
38 TraesCS7B01G144600 chr6D 96.460 113 4 0 574 686 73071616 73071728 2.170000e-43 187.0
39 TraesCS7B01G144600 chr3D 95.455 110 5 0 580 689 419583109 419583000 4.700000e-40 176.0
40 TraesCS7B01G144600 chr3D 74.611 386 71 22 7 377 562216551 562216178 1.330000e-30 145.0
41 TraesCS7B01G144600 chr3D 75.155 322 62 15 130 442 501309139 501309451 7.980000e-28 135.0
42 TraesCS7B01G144600 chr3D 87.209 86 11 0 4405 4490 540569225 540569140 1.050000e-16 99.0
43 TraesCS7B01G144600 chr5B 87.850 107 13 0 4384 4490 479726990 479726884 4.800000e-25 126.0
44 TraesCS7B01G144600 chr1D 86.916 107 14 0 4384 4490 483953868 483953762 2.230000e-23 121.0
45 TraesCS7B01G144600 chr1D 74.603 189 39 7 191 377 453043404 453043585 1.760000e-09 75.0
46 TraesCS7B01G144600 chr2D 85.047 107 16 0 4384 4490 122866720 122866826 4.830000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G144600 chr7B 186862572 186867142 4570 False 8442.000000 8442 100.000 1 4571 1 chr7B.!!$F1 4570
1 TraesCS7B01G144600 chr7D 214334380 214341038 6658 True 954.333333 2052 91.752 2 4251 6 chr7D.!!$R1 4249
2 TraesCS7B01G144600 chr7A 226718121 226722695 4574 True 948.166667 1980 90.721 113 4405 6 chr7A.!!$R2 4292

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
983 2073 0.036010 AGATCACAAGTGAAGGGGCG 60.036 55.0 7.02 0.0 43.58 6.13 F
1345 2453 0.322546 GGGAGAACGCCATTGAGGTT 60.323 55.0 0.00 0.0 40.61 3.50 F
2600 5091 0.533085 GAGCCCCGTTATTCCTCTGC 60.533 60.0 0.00 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2581 5072 0.533085 GCAGAGGAATAACGGGGCTC 60.533 60.000 0.0 0.0 0.00 4.70 R
3004 6017 2.735762 CGAACAGCTTACTCTGGTAGCC 60.736 54.545 0.0 0.0 38.36 3.93 R
4501 7551 0.032813 TGGGGTCTAACCGTCTAGGG 60.033 60.000 0.0 0.0 46.96 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.271597 GGCAAAGCCTTTCTCCTCTCA 60.272 52.381 0.00 0.00 46.69 3.27
41 42 5.044993 AGCCTTTCTCCTCTCAATCTTCATT 60.045 40.000 0.00 0.00 0.00 2.57
44 45 5.768980 TTCTCCTCTCAATCTTCATTGGT 57.231 39.130 0.00 0.00 40.08 3.67
51 52 3.081061 TCAATCTTCATTGGTGAACCCG 58.919 45.455 0.00 0.00 39.36 5.28
59 60 1.611519 TTGGTGAACCCGTGAATTCC 58.388 50.000 2.27 0.00 35.15 3.01
92 94 1.202794 TGCTGCTCAAGTGGTTGATGA 60.203 47.619 0.00 0.00 41.96 2.92
96 98 1.878102 GCTCAAGTGGTTGATGACGGT 60.878 52.381 0.00 0.00 41.96 4.83
99 101 2.158885 TCAAGTGGTTGATGACGGTGAA 60.159 45.455 0.00 0.00 37.79 3.18
101 103 1.691976 AGTGGTTGATGACGGTGAAGA 59.308 47.619 0.00 0.00 0.00 2.87
102 104 2.069273 GTGGTTGATGACGGTGAAGAG 58.931 52.381 0.00 0.00 0.00 2.85
108 110 3.099905 TGATGACGGTGAAGAGAATCCT 58.900 45.455 0.00 0.00 33.66 3.24
136 138 2.028294 TCGGCTCCGTCTAGTAGATAGG 60.028 54.545 14.95 14.95 40.74 2.57
139 141 3.502979 GGCTCCGTCTAGTAGATAGGTTG 59.497 52.174 18.45 14.73 31.83 3.77
147 149 6.322201 CGTCTAGTAGATAGGTTGGGGTTTTA 59.678 42.308 2.51 0.00 31.83 1.52
150 152 9.956558 TCTAGTAGATAGGTTGGGGTTTTAATA 57.043 33.333 0.00 0.00 31.83 0.98
151 153 9.993454 CTAGTAGATAGGTTGGGGTTTTAATAC 57.007 37.037 0.00 0.00 0.00 1.89
153 155 8.712103 AGTAGATAGGTTGGGGTTTTAATACTC 58.288 37.037 0.00 0.00 0.00 2.59
155 157 7.935405 AGATAGGTTGGGGTTTTAATACTCAA 58.065 34.615 0.00 1.10 0.00 3.02
179 186 3.776781 CGGCGGTGGATGGTGGTA 61.777 66.667 0.00 0.00 0.00 3.25
188 195 4.704965 GGTGGATGGTGGTACTTCTTATC 58.295 47.826 0.00 0.00 0.00 1.75
189 196 4.409247 GGTGGATGGTGGTACTTCTTATCT 59.591 45.833 0.00 0.00 0.00 1.98
232 239 4.803088 CGATCCTTCTCAAGTTCATCAGTC 59.197 45.833 0.00 0.00 0.00 3.51
244 251 4.398358 AGTTCATCAGTCGAGACGGATTAA 59.602 41.667 14.48 11.15 42.16 1.40
253 260 2.734492 CGAGACGGATTAAACGGAGCTT 60.734 50.000 7.66 0.00 35.23 3.74
314 321 5.178797 CGAGGTTAGGTTTTCTCATCATGT 58.821 41.667 0.00 0.00 0.00 3.21
321 328 6.032956 AGGTTTTCTCATCATGTGTACGTA 57.967 37.500 0.00 0.00 0.00 3.57
350 357 5.583854 CGAGATTTGATGTCAGGTTCTTCAT 59.416 40.000 0.00 0.00 0.00 2.57
374 382 3.924073 TCGATTCATTGTTCAACGACGAT 59.076 39.130 0.00 0.00 0.00 3.73
377 385 5.500771 CGATTCATTGTTCAACGACGATGAT 60.501 40.000 8.72 0.00 45.30 2.45
382 390 2.918600 TGTTCAACGACGATGATTACGG 59.081 45.455 8.72 0.00 34.93 4.02
390 398 0.673985 CGATGATTACGGCTCCAGGA 59.326 55.000 0.00 0.00 0.00 3.86
393 401 0.106708 TGATTACGGCTCCAGGATGC 59.893 55.000 0.00 0.00 31.97 3.91
395 403 0.394565 ATTACGGCTCCAGGATGCTC 59.605 55.000 9.85 1.91 31.97 4.26
403 411 2.289320 GCTCCAGGATGCTCGTCATTAT 60.289 50.000 0.00 0.00 35.05 1.28
407 415 2.050144 AGGATGCTCGTCATTATGGGT 58.950 47.619 0.00 0.00 35.05 4.51
424 433 1.404035 GGGTCGTGCACAAAGACTTTT 59.596 47.619 18.64 0.00 35.42 2.27
450 465 4.862018 GCTATCATCAATAAGTCGGCTCTC 59.138 45.833 0.00 0.00 0.00 3.20
510 526 2.736721 CTGACGACGACAATGGTCATTT 59.263 45.455 0.00 0.00 44.54 2.32
579 1620 8.184192 CGCTTTGTATTTCTGATGAACCTTTAT 58.816 33.333 0.00 0.00 31.02 1.40
584 1625 9.832445 TGTATTTCTGATGAACCTTTATACTCC 57.168 33.333 0.00 0.00 29.28 3.85
585 1626 9.274206 GTATTTCTGATGAACCTTTATACTCCC 57.726 37.037 0.00 0.00 31.02 4.30
586 1627 7.510675 TTTCTGATGAACCTTTATACTCCCT 57.489 36.000 0.00 0.00 31.02 4.20
587 1628 6.732896 TCTGATGAACCTTTATACTCCCTC 57.267 41.667 0.00 0.00 0.00 4.30
588 1629 5.602978 TCTGATGAACCTTTATACTCCCTCC 59.397 44.000 0.00 0.00 0.00 4.30
589 1630 4.344102 TGATGAACCTTTATACTCCCTCCG 59.656 45.833 0.00 0.00 0.00 4.63
590 1631 3.716431 TGAACCTTTATACTCCCTCCGT 58.284 45.455 0.00 0.00 0.00 4.69
591 1632 4.098894 TGAACCTTTATACTCCCTCCGTT 58.901 43.478 0.00 0.00 0.00 4.44
592 1633 4.161001 TGAACCTTTATACTCCCTCCGTTC 59.839 45.833 0.00 0.00 0.00 3.95
593 1634 2.692041 ACCTTTATACTCCCTCCGTTCG 59.308 50.000 0.00 0.00 0.00 3.95
594 1635 2.035576 CCTTTATACTCCCTCCGTTCGG 59.964 54.545 4.74 4.74 0.00 4.30
595 1636 2.734755 TTATACTCCCTCCGTTCGGA 57.265 50.000 13.34 13.34 0.00 4.55
596 1637 2.734755 TATACTCCCTCCGTTCGGAA 57.265 50.000 14.79 0.00 33.41 4.30
597 1638 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
598 1639 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
599 1640 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
600 1641 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
601 1642 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
602 1643 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
603 1644 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
604 1645 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
605 1646 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
606 1647 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
607 1648 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
608 1649 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
609 1650 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
610 1651 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
611 1652 4.383649 CGTTCGGAATTACTTGTCTCGAAA 59.616 41.667 0.00 0.00 37.00 3.46
612 1653 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
613 1654 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
614 1655 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
615 1656 5.350365 TCGGAATTACTTGTCTCGAAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
616 1657 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
617 1658 6.037172 CGGAATTACTTGTCTCGAAAATGGAT 59.963 38.462 0.00 0.00 0.00 3.41
618 1659 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
619 1660 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
620 1661 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
621 1662 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
622 1663 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
623 1664 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
624 1665 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
625 1666 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
626 1667 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
627 1668 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
628 1669 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
629 1670 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
630 1671 9.350951 TCTCGAAAATGGATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
631 1672 9.967346 CTCGAAAATGGATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
658 1699 9.664332 AATATGTCTAGATACATCCATTTCTGC 57.336 33.333 0.00 0.00 40.52 4.26
659 1700 5.532557 TGTCTAGATACATCCATTTCTGCG 58.467 41.667 0.00 0.00 0.00 5.18
660 1701 5.301805 TGTCTAGATACATCCATTTCTGCGA 59.698 40.000 0.00 0.00 0.00 5.10
661 1702 5.631512 GTCTAGATACATCCATTTCTGCGAC 59.368 44.000 0.00 0.00 0.00 5.19
662 1703 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
663 1704 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
664 1705 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
665 1706 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
666 1707 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
667 1708 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
668 1709 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
669 1710 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
670 1711 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
671 1712 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
672 1713 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
673 1714 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
674 1715 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
675 1716 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
676 1717 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
677 1718 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
678 1719 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
679 1720 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
680 1721 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
681 1722 2.564062 ACAAGTAATTCCGAACGGAGGA 59.436 45.455 15.34 3.20 46.06 3.71
696 1737 3.054287 ACGGAGGAAGTAGATCTCAGTCA 60.054 47.826 0.00 0.00 32.17 3.41
704 1745 8.482128 AGGAAGTAGATCTCAGTCATTTTAAGG 58.518 37.037 0.00 0.00 0.00 2.69
717 1758 9.807649 CAGTCATTTTAAGGAAAAATATGAGGG 57.192 33.333 0.00 0.00 44.27 4.30
729 1770 7.039714 GGAAAAATATGAGGGAAAACACAGACT 60.040 37.037 0.00 0.00 0.00 3.24
732 1773 1.843851 TGAGGGAAAACACAGACTGGT 59.156 47.619 7.51 0.00 0.00 4.00
749 1790 5.048434 AGACTGGTGAGCAAAGAAAATTAGC 60.048 40.000 0.00 0.00 0.00 3.09
901 1985 2.672996 CAACGCCAACCCTCCCTG 60.673 66.667 0.00 0.00 0.00 4.45
905 1990 2.035783 GCCAACCCTCCCTGTTCC 59.964 66.667 0.00 0.00 0.00 3.62
921 2006 1.485480 GTTCCTTCTGCCTACCTACCC 59.515 57.143 0.00 0.00 0.00 3.69
942 2032 2.452114 CCTCCCCCTCACCTCACT 59.548 66.667 0.00 0.00 0.00 3.41
983 2073 0.036010 AGATCACAAGTGAAGGGGCG 60.036 55.000 7.02 0.00 43.58 6.13
986 2076 1.228124 CACAAGTGAAGGGGCGGAA 60.228 57.895 0.00 0.00 0.00 4.30
1088 2180 8.209584 CAGAATCCTCTCCATCTTCTTTCATAA 58.790 37.037 0.00 0.00 0.00 1.90
1192 2286 1.784301 TTCTTTGGGGACGGCATGGA 61.784 55.000 0.00 0.00 0.00 3.41
1345 2453 0.322546 GGGAGAACGCCATTGAGGTT 60.323 55.000 0.00 0.00 40.61 3.50
1356 2464 3.448660 GCCATTGAGGTTTAATTGGAGCT 59.551 43.478 0.00 0.00 40.61 4.09
1359 2467 6.490040 GCCATTGAGGTTTAATTGGAGCTATA 59.510 38.462 0.00 0.00 40.61 1.31
1399 2507 3.439293 AGTGAAACGAGCGTGATGATAG 58.561 45.455 0.00 0.00 45.86 2.08
1419 2527 6.500400 TGATAGATCCCCATTTCCTATTCGAA 59.500 38.462 0.00 0.00 0.00 3.71
1472 2583 7.301868 TGGAGTGGAAATCTTAAAAGCAATT 57.698 32.000 0.00 0.00 0.00 2.32
1474 2585 7.656948 TGGAGTGGAAATCTTAAAAGCAATTTG 59.343 33.333 0.00 0.00 32.27 2.32
1476 2587 9.428097 GAGTGGAAATCTTAAAAGCAATTTGAT 57.572 29.630 0.00 0.00 32.27 2.57
1490 2601 9.822185 AAAGCAATTTGATAAAGAGTCAAAACT 57.178 25.926 0.00 2.21 45.50 2.66
1506 3993 6.540551 AGTCAAAACTCTTTCTTCAGGAAGAC 59.459 38.462 11.09 0.00 46.13 3.01
1507 3994 5.823045 TCAAAACTCTTTCTTCAGGAAGACC 59.177 40.000 11.09 0.00 46.13 3.85
1524 4011 1.609072 GACCACTGAAACAAAGCCCTC 59.391 52.381 0.00 0.00 0.00 4.30
1531 4018 1.000274 GAAACAAAGCCCTCGCAATGT 60.000 47.619 0.00 0.00 37.58 2.71
1579 4067 9.310716 AGAAATTCAGCTTTTTCTTGAAAGAAG 57.689 29.630 9.28 10.63 45.01 2.85
1582 4070 8.813643 ATTCAGCTTTTTCTTGAAAGAAGATG 57.186 30.769 18.52 18.52 45.01 2.90
1591 4079 2.795329 TGAAAGAAGATGCCCCTCAAC 58.205 47.619 0.00 0.00 0.00 3.18
1592 4080 2.108075 TGAAAGAAGATGCCCCTCAACA 59.892 45.455 0.00 0.00 0.00 3.33
1593 4081 2.206576 AAGAAGATGCCCCTCAACAC 57.793 50.000 0.00 0.00 0.00 3.32
1595 4083 1.280421 AGAAGATGCCCCTCAACACTC 59.720 52.381 0.00 0.00 0.00 3.51
1596 4084 1.003580 GAAGATGCCCCTCAACACTCA 59.996 52.381 0.00 0.00 0.00 3.41
1597 4085 0.617413 AGATGCCCCTCAACACTCAG 59.383 55.000 0.00 0.00 0.00 3.35
1623 4112 5.060662 TCTTGAAGTGGACTAATCTGTCG 57.939 43.478 0.00 0.00 37.81 4.35
1633 4122 4.246458 GACTAATCTGTCGGTGCTTTCTT 58.754 43.478 0.00 0.00 0.00 2.52
1661 4150 4.204978 GCGAAATTACGAGCCAATTTGATG 59.795 41.667 0.00 0.00 36.09 3.07
1745 4234 1.165270 TTCAGATCGACGTGAGCTCA 58.835 50.000 13.74 13.74 42.71 4.26
1852 4341 8.383619 CGAGGTTTCACTTCAATAAATCACTAG 58.616 37.037 0.00 0.00 0.00 2.57
2102 4591 7.604164 ACATGGCATATAATGTGTACTTAGCTC 59.396 37.037 0.00 0.00 35.71 4.09
2202 4691 5.105064 GGTTCTAAACTGCTCCATACACCTA 60.105 44.000 0.00 0.00 0.00 3.08
2206 4695 4.844349 AACTGCTCCATACACCTACATT 57.156 40.909 0.00 0.00 0.00 2.71
2211 4700 5.853936 TGCTCCATACACCTACATTATGTC 58.146 41.667 0.00 0.00 0.00 3.06
2424 4913 5.316167 AGTATGACCATTGTTGCTTCTTCA 58.684 37.500 0.00 0.00 0.00 3.02
2434 4923 8.610896 CCATTGTTGCTTCTTCAATTTTTGTTA 58.389 29.630 0.00 0.00 30.74 2.41
2510 4999 6.630203 ACCTGTTGGTATCCTTTGTGTATA 57.370 37.500 0.00 0.00 46.43 1.47
2534 5023 3.560636 ACTGCTTTTGGTACTGACACT 57.439 42.857 0.00 0.00 0.00 3.55
2535 5024 3.206150 ACTGCTTTTGGTACTGACACTG 58.794 45.455 0.00 0.00 0.00 3.66
2580 5071 5.538053 TGGCACAAGACTTGGAATCATTTTA 59.462 36.000 19.16 0.00 31.92 1.52
2581 5072 6.095377 GGCACAAGACTTGGAATCATTTTAG 58.905 40.000 19.16 0.00 34.12 1.85
2600 5091 0.533085 GAGCCCCGTTATTCCTCTGC 60.533 60.000 0.00 0.00 0.00 4.26
2618 5109 5.062308 CCTCTGCGAGAAACTGTATTGTAAC 59.938 44.000 7.07 0.00 0.00 2.50
2660 5151 2.422377 GCTAAATGAACATACCGGGGGT 60.422 50.000 6.32 0.00 40.16 4.95
2663 5154 2.430248 ATGAACATACCGGGGGTTTC 57.570 50.000 6.32 3.69 37.09 2.78
2760 5773 3.110705 AGTCCTGTGCCAGATACAATCT 58.889 45.455 4.00 0.00 41.15 2.40
2845 5858 2.521733 AAGCAAATAACGCGTGCCCG 62.522 55.000 14.98 1.50 39.13 6.13
2978 5991 4.464008 AGCATCTGAAAACAACAGAGGAA 58.536 39.130 12.50 0.00 45.14 3.36
3004 6017 4.497473 TTGCGAATTAAAACTGTCCCAG 57.503 40.909 0.00 0.00 37.52 4.45
3082 6095 2.946329 TCAACTTGCCGCACTTTCTTTA 59.054 40.909 0.00 0.00 0.00 1.85
3089 6102 2.292292 GCCGCACTTTCTTTACCTCAAA 59.708 45.455 0.00 0.00 0.00 2.69
3127 6141 5.105106 TGACCACTGTTGTCTTCAGTCTTAA 60.105 40.000 12.51 0.00 43.14 1.85
3209 6223 4.940654 GCATAGAAGGAGCAGAAGAACTTT 59.059 41.667 0.00 0.00 0.00 2.66
3436 6450 3.075283 TGTCCCTTTTGCCTCTTATCCAA 59.925 43.478 0.00 0.00 0.00 3.53
3604 6620 8.979534 AGGAACTTCTTTACGGATTATACTTCT 58.020 33.333 0.00 0.00 27.25 2.85
3694 6711 8.487176 CAACAAAAGTTACAAGTCATTTATGGC 58.513 33.333 0.00 0.00 0.00 4.40
3748 6765 9.982651 TCCTACTATATTTGCAGTAATTCTGAC 57.017 33.333 8.52 2.53 46.27 3.51
3754 6771 8.887036 ATATTTGCAGTAATTCTGACGTGATA 57.113 30.769 0.00 0.00 46.27 2.15
3782 6799 7.643123 TGGAGAAATAGATTAGGAAGGCTTTT 58.357 34.615 0.00 0.00 0.00 2.27
3786 6803 8.275040 AGAAATAGATTAGGAAGGCTTTTAGCA 58.725 33.333 0.00 0.00 44.75 3.49
3866 6907 9.233232 CGCAAGGAGGTGAAAAATAATTTATAC 57.767 33.333 0.00 0.00 0.00 1.47
3931 6972 3.311106 CTGAATTGTGTCATGTTGTGCC 58.689 45.455 0.00 0.00 0.00 5.01
3942 6983 9.271828 TGTGTCATGTTGTGCCTATATTATAAG 57.728 33.333 0.00 0.00 0.00 1.73
3961 7002 9.716556 ATTATAAGATGATATACTCCCTCCGTT 57.283 33.333 0.00 0.00 0.00 4.44
3962 7003 5.986501 AAGATGATATACTCCCTCCGTTC 57.013 43.478 0.00 0.00 0.00 3.95
3963 7004 4.345854 AGATGATATACTCCCTCCGTTCC 58.654 47.826 0.00 0.00 0.00 3.62
3964 7005 3.897657 TGATATACTCCCTCCGTTCCT 57.102 47.619 0.00 0.00 0.00 3.36
3965 7006 5.253330 AGATGATATACTCCCTCCGTTCCTA 59.747 44.000 0.00 0.00 0.00 2.94
3966 7007 5.329191 TGATATACTCCCTCCGTTCCTAA 57.671 43.478 0.00 0.00 0.00 2.69
3967 7008 5.708544 TGATATACTCCCTCCGTTCCTAAA 58.291 41.667 0.00 0.00 0.00 1.85
3968 7009 6.320518 TGATATACTCCCTCCGTTCCTAAAT 58.679 40.000 0.00 0.00 0.00 1.40
3969 7010 7.472741 TGATATACTCCCTCCGTTCCTAAATA 58.527 38.462 0.00 0.00 0.00 1.40
3970 7011 8.120538 TGATATACTCCCTCCGTTCCTAAATAT 58.879 37.037 0.00 0.00 0.00 1.28
3971 7012 8.912614 ATATACTCCCTCCGTTCCTAAATATT 57.087 34.615 0.00 0.00 0.00 1.28
3972 7013 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3973 7014 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3974 7015 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3975 7016 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3976 7017 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3977 7018 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3978 7019 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3979 7020 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3980 7021 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3981 7022 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3982 7023 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3983 7024 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3998 7039 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
4010 7051 7.946655 TTTCAACAAGTGACTACATACAGAG 57.053 36.000 0.00 0.00 35.39 3.35
4011 7052 5.470368 TCAACAAGTGACTACATACAGAGC 58.530 41.667 0.00 0.00 0.00 4.09
4012 7053 5.010617 TCAACAAGTGACTACATACAGAGCA 59.989 40.000 0.00 0.00 0.00 4.26
4013 7054 5.468540 ACAAGTGACTACATACAGAGCAA 57.531 39.130 0.00 0.00 0.00 3.91
4014 7055 5.853936 ACAAGTGACTACATACAGAGCAAA 58.146 37.500 0.00 0.00 0.00 3.68
4015 7056 6.288294 ACAAGTGACTACATACAGAGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
4016 7057 6.936900 ACAAGTGACTACATACAGAGCAAAAT 59.063 34.615 0.00 0.00 0.00 1.82
4017 7058 6.974932 AGTGACTACATACAGAGCAAAATG 57.025 37.500 0.00 0.00 0.00 2.32
4018 7059 6.701340 AGTGACTACATACAGAGCAAAATGA 58.299 36.000 0.00 0.00 0.00 2.57
4019 7060 6.815641 AGTGACTACATACAGAGCAAAATGAG 59.184 38.462 0.00 0.00 0.00 2.90
4020 7061 6.591834 GTGACTACATACAGAGCAAAATGAGT 59.408 38.462 0.00 0.00 0.00 3.41
4021 7062 6.591448 TGACTACATACAGAGCAAAATGAGTG 59.409 38.462 0.00 0.00 0.00 3.51
4022 7063 6.701340 ACTACATACAGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
4023 7064 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
4024 7065 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
4025 7066 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
4026 7067 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
4027 7068 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
4028 7069 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
4029 7070 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
4030 7071 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
4068 7109 5.447624 CATACATCCGTATGTGGTAGTCA 57.552 43.478 3.56 0.00 46.70 3.41
4069 7110 6.025749 CATACATCCGTATGTGGTAGTCAT 57.974 41.667 3.56 0.00 46.70 3.06
4070 7111 6.455647 CATACATCCGTATGTGGTAGTCATT 58.544 40.000 3.56 0.00 46.70 2.57
4071 7112 5.353394 ACATCCGTATGTGGTAGTCATTT 57.647 39.130 0.00 0.00 44.79 2.32
4072 7113 5.116180 ACATCCGTATGTGGTAGTCATTTG 58.884 41.667 0.00 0.00 44.79 2.32
4073 7114 5.105106 ACATCCGTATGTGGTAGTCATTTGA 60.105 40.000 0.00 0.00 44.79 2.69
4074 7115 5.408880 TCCGTATGTGGTAGTCATTTGAA 57.591 39.130 0.00 0.00 0.00 2.69
4075 7116 5.795972 TCCGTATGTGGTAGTCATTTGAAA 58.204 37.500 0.00 0.00 0.00 2.69
4076 7117 6.411376 TCCGTATGTGGTAGTCATTTGAAAT 58.589 36.000 0.00 0.00 0.00 2.17
4077 7118 6.315144 TCCGTATGTGGTAGTCATTTGAAATG 59.685 38.462 11.54 11.54 0.00 2.32
4078 7119 6.093495 CCGTATGTGGTAGTCATTTGAAATGT 59.907 38.462 16.62 2.38 0.00 2.71
4079 7120 7.180079 CGTATGTGGTAGTCATTTGAAATGTC 58.820 38.462 16.62 11.74 0.00 3.06
4080 7121 7.064609 CGTATGTGGTAGTCATTTGAAATGTCT 59.935 37.037 18.62 18.62 0.00 3.41
4081 7122 9.378551 GTATGTGGTAGTCATTTGAAATGTCTA 57.621 33.333 16.93 16.93 0.00 2.59
4082 7123 7.905604 TGTGGTAGTCATTTGAAATGTCTAG 57.094 36.000 19.92 0.00 0.00 2.43
4083 7124 7.676004 TGTGGTAGTCATTTGAAATGTCTAGA 58.324 34.615 19.92 10.61 0.00 2.43
4084 7125 8.154203 TGTGGTAGTCATTTGAAATGTCTAGAA 58.846 33.333 19.92 11.56 0.00 2.10
4085 7126 8.999431 GTGGTAGTCATTTGAAATGTCTAGAAA 58.001 33.333 19.92 9.72 0.00 2.52
4086 7127 9.219603 TGGTAGTCATTTGAAATGTCTAGAAAG 57.780 33.333 19.92 0.00 0.00 2.62
4087 7128 9.436957 GGTAGTCATTTGAAATGTCTAGAAAGA 57.563 33.333 19.92 3.04 0.00 2.52
4104 7145 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4105 7146 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4106 7147 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4107 7148 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4108 7149 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4109 7150 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4110 7151 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4111 7152 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
4112 7153 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
4177 7221 8.571461 ACAAGATTATCACAATTCATCAGTGT 57.429 30.769 0.00 0.00 34.94 3.55
4263 7311 6.476380 GCACAACAAAATCAAAGAATCACAGA 59.524 34.615 0.00 0.00 0.00 3.41
4265 7313 8.323140 CACAACAAAATCAAAGAATCACAGAAC 58.677 33.333 0.00 0.00 0.00 3.01
4325 7375 2.200373 TGGAAAGGTAAAGCTCTGGC 57.800 50.000 0.00 0.00 39.06 4.85
4327 7377 2.041620 TGGAAAGGTAAAGCTCTGGCAT 59.958 45.455 0.00 0.00 41.70 4.40
4330 7380 2.604046 AGGTAAAGCTCTGGCATACG 57.396 50.000 0.00 0.00 41.70 3.06
4358 7408 7.913297 GCATTAAGTATTTTTCCTGTTGCGATA 59.087 33.333 0.00 0.00 0.00 2.92
4359 7409 9.221775 CATTAAGTATTTTTCCTGTTGCGATAC 57.778 33.333 0.00 0.00 0.00 2.24
4360 7410 6.811253 AAGTATTTTTCCTGTTGCGATACA 57.189 33.333 0.00 0.00 0.00 2.29
4361 7411 6.811253 AGTATTTTTCCTGTTGCGATACAA 57.189 33.333 0.00 0.00 35.33 2.41
4362 7412 7.209471 AGTATTTTTCCTGTTGCGATACAAA 57.791 32.000 0.00 0.00 40.82 2.83
4363 7413 7.653647 AGTATTTTTCCTGTTGCGATACAAAA 58.346 30.769 0.00 0.00 40.82 2.44
4367 7417 4.695217 TCCTGTTGCGATACAAAAATCC 57.305 40.909 0.00 0.00 40.82 3.01
4375 7425 5.270083 TGCGATACAAAAATCCAAATAGCG 58.730 37.500 0.00 0.00 0.00 4.26
4382 7432 5.150683 CAAAAATCCAAATAGCGAACGACA 58.849 37.500 0.00 0.00 0.00 4.35
4392 7442 1.080093 CGAACGACAGGCCTAGCAA 60.080 57.895 3.98 0.00 0.00 3.91
4405 7455 0.035630 CTAGCAAAGTGGCAGAGGCT 60.036 55.000 7.80 7.80 40.87 4.58
4406 7456 0.036010 TAGCAAAGTGGCAGAGGCTC 60.036 55.000 6.34 6.34 40.87 4.70
4407 7457 1.303155 GCAAAGTGGCAGAGGCTCT 60.303 57.895 12.24 12.24 40.87 4.09
4408 7458 1.304509 GCAAAGTGGCAGAGGCTCTC 61.305 60.000 15.60 9.59 40.87 3.20
4409 7459 0.676151 CAAAGTGGCAGAGGCTCTCC 60.676 60.000 15.60 18.32 40.87 3.71
4410 7460 1.130054 AAAGTGGCAGAGGCTCTCCA 61.130 55.000 23.36 23.36 40.87 3.86
4411 7461 1.835927 AAGTGGCAGAGGCTCTCCAC 61.836 60.000 34.70 34.70 41.14 4.02
4412 7462 2.121385 TGGCAGAGGCTCTCCACT 59.879 61.111 23.36 0.02 40.87 4.00
4413 7463 1.537397 TGGCAGAGGCTCTCCACTT 60.537 57.895 23.36 0.00 40.87 3.16
4414 7464 1.078567 GGCAGAGGCTCTCCACTTG 60.079 63.158 15.60 4.29 40.87 3.16
4415 7465 1.676384 GCAGAGGCTCTCCACTTGT 59.324 57.895 15.60 0.00 36.96 3.16
4416 7466 0.673022 GCAGAGGCTCTCCACTTGTG 60.673 60.000 15.60 2.69 36.96 3.33
4417 7467 0.036577 CAGAGGCTCTCCACTTGTGG 60.037 60.000 15.60 13.24 30.44 4.17
4418 7468 1.376553 GAGGCTCTCCACTTGTGGC 60.377 63.158 14.49 3.40 33.74 5.01
4419 7469 2.360475 GGCTCTCCACTTGTGGCC 60.360 66.667 14.49 8.66 0.00 5.36
4420 7470 2.753029 GCTCTCCACTTGTGGCCT 59.247 61.111 14.49 0.00 0.00 5.19
4421 7471 1.553690 GGCTCTCCACTTGTGGCCTA 61.554 60.000 14.49 2.37 36.96 3.93
4422 7472 0.324943 GCTCTCCACTTGTGGCCTAA 59.675 55.000 14.49 0.00 0.00 2.69
4423 7473 1.271379 GCTCTCCACTTGTGGCCTAAA 60.271 52.381 14.49 0.00 0.00 1.85
4424 7474 2.704572 CTCTCCACTTGTGGCCTAAAG 58.295 52.381 14.49 10.42 0.00 1.85
4425 7475 1.351017 TCTCCACTTGTGGCCTAAAGG 59.649 52.381 18.52 11.82 38.53 3.11
4426 7476 1.073923 CTCCACTTGTGGCCTAAAGGT 59.926 52.381 18.52 3.01 37.57 3.50
4427 7477 1.073284 TCCACTTGTGGCCTAAAGGTC 59.927 52.381 18.52 0.00 41.09 3.85
4428 7478 1.073923 CCACTTGTGGCCTAAAGGTCT 59.926 52.381 18.52 0.00 41.34 3.85
4429 7479 2.489073 CCACTTGTGGCCTAAAGGTCTT 60.489 50.000 18.52 0.00 41.34 3.01
4430 7480 2.554032 CACTTGTGGCCTAAAGGTCTTG 59.446 50.000 18.52 7.21 41.34 3.02
4431 7481 2.162681 CTTGTGGCCTAAAGGTCTTGG 58.837 52.381 3.32 0.00 41.34 3.61
4432 7482 0.404040 TGTGGCCTAAAGGTCTTGGG 59.596 55.000 3.32 0.00 41.34 4.12
4433 7483 0.404426 GTGGCCTAAAGGTCTTGGGT 59.596 55.000 3.32 0.00 41.34 4.51
4434 7484 0.696501 TGGCCTAAAGGTCTTGGGTC 59.303 55.000 3.32 0.00 41.34 4.46
4435 7485 0.034380 GGCCTAAAGGTCTTGGGTCC 60.034 60.000 0.00 0.00 36.72 4.46
4436 7486 0.392595 GCCTAAAGGTCTTGGGTCCG 60.393 60.000 0.00 0.00 37.57 4.79
4437 7487 1.272807 CCTAAAGGTCTTGGGTCCGA 58.727 55.000 0.00 0.00 0.00 4.55
4438 7488 1.626825 CCTAAAGGTCTTGGGTCCGAA 59.373 52.381 0.00 0.00 0.00 4.30
4439 7489 2.238898 CCTAAAGGTCTTGGGTCCGAAT 59.761 50.000 0.00 0.00 0.00 3.34
4440 7490 2.491675 AAAGGTCTTGGGTCCGAATC 57.508 50.000 0.00 0.00 0.00 2.52
4441 7491 1.358152 AAGGTCTTGGGTCCGAATCA 58.642 50.000 0.00 0.00 0.00 2.57
4442 7492 0.905357 AGGTCTTGGGTCCGAATCAG 59.095 55.000 0.00 0.00 0.00 2.90
4443 7493 0.613777 GGTCTTGGGTCCGAATCAGT 59.386 55.000 0.00 0.00 0.00 3.41
4444 7494 1.405661 GGTCTTGGGTCCGAATCAGTC 60.406 57.143 0.00 0.00 0.00 3.51
4445 7495 1.550976 GTCTTGGGTCCGAATCAGTCT 59.449 52.381 0.00 0.00 0.00 3.24
4446 7496 1.825474 TCTTGGGTCCGAATCAGTCTC 59.175 52.381 0.00 0.00 0.00 3.36
4447 7497 1.550524 CTTGGGTCCGAATCAGTCTCA 59.449 52.381 0.00 0.00 0.00 3.27
4448 7498 1.866015 TGGGTCCGAATCAGTCTCAT 58.134 50.000 0.00 0.00 0.00 2.90
4449 7499 2.187958 TGGGTCCGAATCAGTCTCATT 58.812 47.619 0.00 0.00 0.00 2.57
4450 7500 2.093500 TGGGTCCGAATCAGTCTCATTG 60.093 50.000 0.00 0.00 0.00 2.82
4451 7501 1.936547 GGTCCGAATCAGTCTCATTGC 59.063 52.381 0.00 0.00 0.00 3.56
4452 7502 2.621338 GTCCGAATCAGTCTCATTGCA 58.379 47.619 0.00 0.00 0.00 4.08
4453 7503 2.606725 GTCCGAATCAGTCTCATTGCAG 59.393 50.000 0.00 0.00 0.00 4.41
4454 7504 2.497273 TCCGAATCAGTCTCATTGCAGA 59.503 45.455 0.00 0.00 0.00 4.26
4455 7505 3.055891 TCCGAATCAGTCTCATTGCAGAA 60.056 43.478 0.00 0.00 0.00 3.02
4456 7506 3.875727 CCGAATCAGTCTCATTGCAGAAT 59.124 43.478 0.00 0.00 0.00 2.40
4457 7507 4.334759 CCGAATCAGTCTCATTGCAGAATT 59.665 41.667 0.00 0.00 0.00 2.17
4458 7508 5.525012 CCGAATCAGTCTCATTGCAGAATTA 59.475 40.000 0.00 0.00 0.00 1.40
4459 7509 6.204301 CCGAATCAGTCTCATTGCAGAATTAT 59.796 38.462 0.00 0.00 0.00 1.28
4460 7510 7.255035 CCGAATCAGTCTCATTGCAGAATTATT 60.255 37.037 0.00 0.00 0.00 1.40
4461 7511 8.768019 CGAATCAGTCTCATTGCAGAATTATTA 58.232 33.333 0.00 0.00 0.00 0.98
4464 7514 7.868775 TCAGTCTCATTGCAGAATTATTATGC 58.131 34.615 16.50 16.50 40.40 3.14
4473 7523 7.275888 TGCAGAATTATTATGCAAGGGTAAG 57.724 36.000 22.50 0.00 46.31 2.34
4474 7524 6.265196 TGCAGAATTATTATGCAAGGGTAAGG 59.735 38.462 22.50 0.00 46.31 2.69
4475 7525 6.681777 CAGAATTATTATGCAAGGGTAAGGC 58.318 40.000 0.00 0.00 0.00 4.35
4476 7526 6.491403 CAGAATTATTATGCAAGGGTAAGGCT 59.509 38.462 0.00 0.00 0.00 4.58
4477 7527 6.491403 AGAATTATTATGCAAGGGTAAGGCTG 59.509 38.462 0.00 0.00 0.00 4.85
4478 7528 3.669939 ATTATGCAAGGGTAAGGCTGT 57.330 42.857 0.00 0.00 0.00 4.40
4479 7529 2.710096 TATGCAAGGGTAAGGCTGTC 57.290 50.000 0.00 0.00 0.00 3.51
4480 7530 0.995024 ATGCAAGGGTAAGGCTGTCT 59.005 50.000 0.00 0.00 0.00 3.41
4481 7531 1.651737 TGCAAGGGTAAGGCTGTCTA 58.348 50.000 0.00 0.00 0.00 2.59
4482 7532 1.555075 TGCAAGGGTAAGGCTGTCTAG 59.445 52.381 0.00 0.00 0.00 2.43
4483 7533 1.555533 GCAAGGGTAAGGCTGTCTAGT 59.444 52.381 0.00 0.00 0.00 2.57
4484 7534 2.764572 GCAAGGGTAAGGCTGTCTAGTA 59.235 50.000 0.00 0.00 0.00 1.82
4485 7535 3.197116 GCAAGGGTAAGGCTGTCTAGTAA 59.803 47.826 0.00 0.00 0.00 2.24
4486 7536 4.141688 GCAAGGGTAAGGCTGTCTAGTAAT 60.142 45.833 0.00 0.00 0.00 1.89
4487 7537 5.629366 GCAAGGGTAAGGCTGTCTAGTAATT 60.629 44.000 0.00 0.00 0.00 1.40
4488 7538 5.873146 AGGGTAAGGCTGTCTAGTAATTC 57.127 43.478 0.00 0.00 0.00 2.17
4489 7539 4.654724 AGGGTAAGGCTGTCTAGTAATTCC 59.345 45.833 0.00 0.00 0.00 3.01
4490 7540 4.501058 GGGTAAGGCTGTCTAGTAATTCCG 60.501 50.000 0.00 0.00 0.00 4.30
4491 7541 4.340381 GGTAAGGCTGTCTAGTAATTCCGA 59.660 45.833 0.00 0.00 0.00 4.55
4492 7542 5.163478 GGTAAGGCTGTCTAGTAATTCCGAA 60.163 44.000 0.00 0.00 0.00 4.30
4493 7543 5.416271 AAGGCTGTCTAGTAATTCCGAAA 57.584 39.130 0.00 0.00 0.00 3.46
4494 7544 5.615925 AGGCTGTCTAGTAATTCCGAAAT 57.384 39.130 0.00 0.00 0.00 2.17
4495 7545 5.990668 AGGCTGTCTAGTAATTCCGAAATT 58.009 37.500 0.00 0.00 38.61 1.82
4496 7546 6.049790 AGGCTGTCTAGTAATTCCGAAATTC 58.950 40.000 0.00 0.00 36.49 2.17
4497 7547 5.236695 GGCTGTCTAGTAATTCCGAAATTCC 59.763 44.000 0.00 0.00 36.49 3.01
4498 7548 5.236695 GCTGTCTAGTAATTCCGAAATTCCC 59.763 44.000 0.00 0.00 36.49 3.97
4499 7549 6.555463 TGTCTAGTAATTCCGAAATTCCCT 57.445 37.500 0.00 0.00 36.49 4.20
4500 7550 6.954232 TGTCTAGTAATTCCGAAATTCCCTT 58.046 36.000 0.00 0.00 36.49 3.95
4501 7551 7.046033 TGTCTAGTAATTCCGAAATTCCCTTC 58.954 38.462 0.00 0.00 36.49 3.46
4502 7552 6.482641 GTCTAGTAATTCCGAAATTCCCTTCC 59.517 42.308 0.00 0.00 36.49 3.46
4503 7553 4.533815 AGTAATTCCGAAATTCCCTTCCC 58.466 43.478 0.00 0.00 36.49 3.97
4504 7554 3.757947 AATTCCGAAATTCCCTTCCCT 57.242 42.857 0.00 0.00 28.70 4.20
4505 7555 4.873724 AATTCCGAAATTCCCTTCCCTA 57.126 40.909 0.00 0.00 28.70 3.53
4506 7556 3.926058 TTCCGAAATTCCCTTCCCTAG 57.074 47.619 0.00 0.00 0.00 3.02
4507 7557 3.124856 TCCGAAATTCCCTTCCCTAGA 57.875 47.619 0.00 0.00 0.00 2.43
4508 7558 2.770232 TCCGAAATTCCCTTCCCTAGAC 59.230 50.000 0.00 0.00 0.00 2.59
4509 7559 2.483188 CCGAAATTCCCTTCCCTAGACG 60.483 54.545 0.00 0.00 0.00 4.18
4510 7560 2.483188 CGAAATTCCCTTCCCTAGACGG 60.483 54.545 0.00 0.00 0.00 4.79
4511 7561 2.265526 AATTCCCTTCCCTAGACGGT 57.734 50.000 0.00 0.00 29.21 4.83
4512 7562 2.265526 ATTCCCTTCCCTAGACGGTT 57.734 50.000 0.00 0.00 29.21 4.44
4513 7563 2.925966 TTCCCTTCCCTAGACGGTTA 57.074 50.000 0.00 0.00 29.21 2.85
4514 7564 2.449137 TCCCTTCCCTAGACGGTTAG 57.551 55.000 0.00 0.00 29.21 2.34
4515 7565 1.925255 TCCCTTCCCTAGACGGTTAGA 59.075 52.381 0.00 0.00 29.21 2.10
4516 7566 2.030371 CCCTTCCCTAGACGGTTAGAC 58.970 57.143 0.00 0.00 29.21 2.59
4517 7567 2.030371 CCTTCCCTAGACGGTTAGACC 58.970 57.143 0.00 0.00 34.05 3.85
4518 7568 2.030371 CTTCCCTAGACGGTTAGACCC 58.970 57.143 0.00 0.00 33.75 4.46
4519 7569 0.259938 TCCCTAGACGGTTAGACCCC 59.740 60.000 0.00 0.00 33.75 4.95
4520 7570 0.032813 CCCTAGACGGTTAGACCCCA 60.033 60.000 0.00 0.00 33.75 4.96
4521 7571 1.412649 CCCTAGACGGTTAGACCCCAT 60.413 57.143 0.00 0.00 33.75 4.00
4522 7572 1.962100 CCTAGACGGTTAGACCCCATC 59.038 57.143 0.00 0.00 33.75 3.51
4523 7573 2.424523 CCTAGACGGTTAGACCCCATCT 60.425 54.545 0.00 0.00 41.95 2.90
4524 7574 2.249309 AGACGGTTAGACCCCATCTT 57.751 50.000 0.00 0.00 39.04 2.40
4525 7575 1.831736 AGACGGTTAGACCCCATCTTG 59.168 52.381 0.00 0.00 39.04 3.02
4526 7576 1.553704 GACGGTTAGACCCCATCTTGT 59.446 52.381 0.00 0.00 39.04 3.16
4527 7577 1.278127 ACGGTTAGACCCCATCTTGTG 59.722 52.381 0.00 0.00 39.04 3.33
4528 7578 1.751437 GGTTAGACCCCATCTTGTGC 58.249 55.000 0.00 0.00 39.04 4.57
4529 7579 1.369625 GTTAGACCCCATCTTGTGCG 58.630 55.000 0.00 0.00 39.04 5.34
4530 7580 0.981183 TTAGACCCCATCTTGTGCGT 59.019 50.000 0.00 0.00 39.04 5.24
4531 7581 0.535335 TAGACCCCATCTTGTGCGTC 59.465 55.000 0.00 0.00 39.04 5.19
4532 7582 1.745489 GACCCCATCTTGTGCGTCC 60.745 63.158 0.00 0.00 0.00 4.79
4533 7583 2.438434 CCCCATCTTGTGCGTCCC 60.438 66.667 0.00 0.00 0.00 4.46
4534 7584 2.350895 CCCATCTTGTGCGTCCCA 59.649 61.111 0.00 0.00 0.00 4.37
4535 7585 1.077501 CCCATCTTGTGCGTCCCAT 60.078 57.895 0.00 0.00 0.00 4.00
4536 7586 0.680921 CCCATCTTGTGCGTCCCATT 60.681 55.000 0.00 0.00 0.00 3.16
4537 7587 0.734889 CCATCTTGTGCGTCCCATTC 59.265 55.000 0.00 0.00 0.00 2.67
4538 7588 1.679944 CCATCTTGTGCGTCCCATTCT 60.680 52.381 0.00 0.00 0.00 2.40
4539 7589 2.086869 CATCTTGTGCGTCCCATTCTT 58.913 47.619 0.00 0.00 0.00 2.52
4540 7590 2.270352 TCTTGTGCGTCCCATTCTTT 57.730 45.000 0.00 0.00 0.00 2.52
4541 7591 2.151202 TCTTGTGCGTCCCATTCTTTC 58.849 47.619 0.00 0.00 0.00 2.62
4542 7592 0.871722 TTGTGCGTCCCATTCTTTCG 59.128 50.000 0.00 0.00 0.00 3.46
4543 7593 0.034198 TGTGCGTCCCATTCTTTCGA 59.966 50.000 0.00 0.00 0.00 3.71
4544 7594 1.338674 TGTGCGTCCCATTCTTTCGAT 60.339 47.619 0.00 0.00 0.00 3.59
4545 7595 2.093921 TGTGCGTCCCATTCTTTCGATA 60.094 45.455 0.00 0.00 0.00 2.92
4546 7596 2.933906 GTGCGTCCCATTCTTTCGATAA 59.066 45.455 0.00 0.00 0.00 1.75
4547 7597 3.372822 GTGCGTCCCATTCTTTCGATAAA 59.627 43.478 0.00 0.00 0.00 1.40
4548 7598 4.004314 TGCGTCCCATTCTTTCGATAAAA 58.996 39.130 0.00 0.00 0.00 1.52
4549 7599 4.638421 TGCGTCCCATTCTTTCGATAAAAT 59.362 37.500 0.00 0.00 0.00 1.82
4550 7600 5.205565 GCGTCCCATTCTTTCGATAAAATC 58.794 41.667 0.00 0.00 0.00 2.17
4551 7601 5.748592 CGTCCCATTCTTTCGATAAAATCC 58.251 41.667 0.00 0.00 0.00 3.01
4552 7602 5.295787 CGTCCCATTCTTTCGATAAAATCCA 59.704 40.000 0.00 0.00 0.00 3.41
4553 7603 6.183360 CGTCCCATTCTTTCGATAAAATCCAA 60.183 38.462 0.00 0.00 0.00 3.53
4554 7604 7.543756 GTCCCATTCTTTCGATAAAATCCAAA 58.456 34.615 0.00 0.00 0.00 3.28
4555 7605 8.197439 GTCCCATTCTTTCGATAAAATCCAAAT 58.803 33.333 0.00 0.00 0.00 2.32
4556 7606 9.415008 TCCCATTCTTTCGATAAAATCCAAATA 57.585 29.630 0.00 0.00 0.00 1.40
4557 7607 9.683069 CCCATTCTTTCGATAAAATCCAAATAG 57.317 33.333 0.00 0.00 0.00 1.73
4558 7608 9.185192 CCATTCTTTCGATAAAATCCAAATAGC 57.815 33.333 0.00 0.00 0.00 2.97
4559 7609 9.734620 CATTCTTTCGATAAAATCCAAATAGCA 57.265 29.630 0.00 0.00 0.00 3.49
4560 7610 9.956720 ATTCTTTCGATAAAATCCAAATAGCAG 57.043 29.630 0.00 0.00 0.00 4.24
4561 7611 8.731275 TCTTTCGATAAAATCCAAATAGCAGA 57.269 30.769 0.00 0.00 0.00 4.26
4562 7612 8.830580 TCTTTCGATAAAATCCAAATAGCAGAG 58.169 33.333 0.00 0.00 0.00 3.35
4563 7613 7.496529 TTCGATAAAATCCAAATAGCAGAGG 57.503 36.000 0.00 0.00 0.00 3.69
4564 7614 6.826668 TCGATAAAATCCAAATAGCAGAGGA 58.173 36.000 0.00 0.00 34.12 3.71
4565 7615 7.279615 TCGATAAAATCCAAATAGCAGAGGAA 58.720 34.615 0.00 0.00 33.17 3.36
4566 7616 7.773224 TCGATAAAATCCAAATAGCAGAGGAAA 59.227 33.333 0.00 0.00 33.17 3.13
4567 7617 8.405531 CGATAAAATCCAAATAGCAGAGGAAAA 58.594 33.333 0.00 0.00 33.17 2.29
4570 7620 7.722949 AAATCCAAATAGCAGAGGAAAATGA 57.277 32.000 0.00 0.00 33.17 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.361104 TTTGCCCTAGCCGCCTTG 60.361 61.111 0.00 0.00 38.69 3.61
23 24 4.779489 TCACCAATGAAGATTGAGAGGAGA 59.221 41.667 0.00 0.00 41.49 3.71
32 33 2.819608 CACGGGTTCACCAATGAAGATT 59.180 45.455 0.00 0.00 45.58 2.40
41 42 0.250989 GGGAATTCACGGGTTCACCA 60.251 55.000 7.93 0.00 40.22 4.17
44 45 0.326927 GGAGGGAATTCACGGGTTCA 59.673 55.000 7.93 0.00 0.00 3.18
51 52 0.106967 GCAGAGGGGAGGGAATTCAC 60.107 60.000 7.93 3.01 0.00 3.18
59 60 3.795041 CAGCAGGCAGAGGGGAGG 61.795 72.222 0.00 0.00 0.00 4.30
92 94 2.419297 GCATCAGGATTCTCTTCACCGT 60.419 50.000 0.00 0.00 0.00 4.83
96 98 2.102084 CGAGGCATCAGGATTCTCTTCA 59.898 50.000 0.00 0.00 0.00 3.02
99 101 1.047002 CCGAGGCATCAGGATTCTCT 58.953 55.000 0.00 0.00 0.00 3.10
101 103 1.053264 AGCCGAGGCATCAGGATTCT 61.053 55.000 17.18 0.00 44.88 2.40
102 104 0.602372 GAGCCGAGGCATCAGGATTC 60.602 60.000 17.18 0.00 44.88 2.52
108 110 2.904178 TAGACGGAGCCGAGGCATCA 62.904 60.000 16.83 0.00 44.88 3.07
136 138 7.201794 GCCTCTATTGAGTATTAAAACCCCAAC 60.202 40.741 3.47 0.00 38.61 3.77
139 141 5.469084 CGCCTCTATTGAGTATTAAAACCCC 59.531 44.000 3.47 0.00 38.61 4.95
147 149 1.000955 CCGCCGCCTCTATTGAGTATT 59.999 52.381 3.47 0.00 38.61 1.89
150 152 2.058595 ACCGCCGCCTCTATTGAGT 61.059 57.895 3.47 0.00 38.61 3.41
151 153 1.592669 CACCGCCGCCTCTATTGAG 60.593 63.158 0.00 0.00 39.92 3.02
153 155 2.383245 ATCCACCGCCGCCTCTATTG 62.383 60.000 0.00 0.00 0.00 1.90
155 157 2.524394 ATCCACCGCCGCCTCTAT 60.524 61.111 0.00 0.00 0.00 1.98
179 186 7.067496 TGGAAAACTGACTCAGATAAGAAGT 57.933 36.000 13.25 0.00 35.18 3.01
188 195 2.421619 GAGCCTGGAAAACTGACTCAG 58.578 52.381 4.36 4.36 37.52 3.35
189 196 1.072331 GGAGCCTGGAAAACTGACTCA 59.928 52.381 0.00 0.00 30.79 3.41
232 239 1.197910 GCTCCGTTTAATCCGTCTCG 58.802 55.000 0.00 0.00 0.00 4.04
244 251 4.839121 TGAATATACACCAAAGCTCCGTT 58.161 39.130 0.00 0.00 0.00 4.44
253 260 5.130975 AGGAGCTGACATGAATATACACCAA 59.869 40.000 0.00 0.00 0.00 3.67
321 328 3.254060 CCTGACATCAAATCTCGTCGTT 58.746 45.455 0.00 0.00 0.00 3.85
350 357 5.096849 TCGTCGTTGAACAATGAATCGATA 58.903 37.500 10.42 0.00 37.99 2.92
374 382 0.106708 GCATCCTGGAGCCGTAATCA 59.893 55.000 1.52 0.00 0.00 2.57
377 385 1.823295 GAGCATCCTGGAGCCGTAA 59.177 57.895 1.52 0.00 0.00 3.18
382 390 0.179062 AATGACGAGCATCCTGGAGC 60.179 55.000 1.52 6.30 35.78 4.70
390 398 1.412710 ACGACCCATAATGACGAGCAT 59.587 47.619 0.00 0.00 39.43 3.79
393 401 1.209128 GCACGACCCATAATGACGAG 58.791 55.000 0.00 0.00 0.00 4.18
395 403 0.650512 GTGCACGACCCATAATGACG 59.349 55.000 0.00 0.00 0.00 4.35
403 411 0.107410 AAGTCTTTGTGCACGACCCA 60.107 50.000 13.13 0.00 0.00 4.51
407 415 3.673746 CAGAAAAGTCTTTGTGCACGA 57.326 42.857 13.13 7.71 30.00 4.35
424 433 4.281941 AGCCGACTTATTGATGATAGCAGA 59.718 41.667 0.00 0.00 0.00 4.26
440 455 3.782632 TCTCATACGAGAGCCGACT 57.217 52.632 0.00 0.00 43.55 4.18
450 465 1.937846 CCGCCGTCGTTCTCATACG 60.938 63.158 0.00 0.00 42.68 3.06
495 510 2.955660 ACCACAAAATGACCATTGTCGT 59.044 40.909 0.00 0.00 44.86 4.34
510 526 0.405198 ATGAGGACCATGCACCACAA 59.595 50.000 9.55 0.00 33.39 3.33
579 1620 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
580 1621 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
581 1622 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
582 1623 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
583 1624 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
584 1625 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
585 1626 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
586 1627 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
587 1628 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
588 1629 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
589 1630 5.834239 TTTCGAGACAAGTAATTCCGAAC 57.166 39.130 0.00 0.00 34.86 3.95
590 1631 6.128391 CCATTTTCGAGACAAGTAATTCCGAA 60.128 38.462 0.00 0.00 33.57 4.30
591 1632 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
592 1633 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
593 1634 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
594 1635 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
595 1636 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
596 1637 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
597 1638 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
598 1639 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
599 1640 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
600 1641 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
601 1642 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
602 1643 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
603 1644 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
604 1645 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
605 1646 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
632 1673 9.664332 GCAGAAATGGATGTATCTAGACATATT 57.336 33.333 0.00 0.00 40.18 1.28
633 1674 7.978414 CGCAGAAATGGATGTATCTAGACATAT 59.022 37.037 0.00 0.00 40.18 1.78
634 1675 7.176690 TCGCAGAAATGGATGTATCTAGACATA 59.823 37.037 0.00 0.00 40.18 2.29
635 1676 6.015095 TCGCAGAAATGGATGTATCTAGACAT 60.015 38.462 0.00 0.00 42.82 3.06
636 1677 5.301805 TCGCAGAAATGGATGTATCTAGACA 59.698 40.000 0.00 0.00 0.00 3.41
637 1678 5.631512 GTCGCAGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 39.69 2.59
638 1679 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
639 1680 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
640 1681 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
641 1682 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
642 1683 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
643 1684 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
644 1685 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
645 1686 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
646 1687 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
647 1688 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
648 1689 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
649 1690 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
650 1691 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
651 1692 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
652 1693 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
653 1694 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
654 1695 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
655 1696 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
656 1697 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
657 1698 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
658 1699 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
659 1700 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
660 1701 2.564062 TCCTCCGTTCGGAATTACTTGT 59.436 45.455 14.79 0.00 33.41 3.16
661 1702 3.241067 TCCTCCGTTCGGAATTACTTG 57.759 47.619 14.79 1.97 33.41 3.16
662 1703 3.260128 ACTTCCTCCGTTCGGAATTACTT 59.740 43.478 14.79 0.00 39.64 2.24
663 1704 2.830321 ACTTCCTCCGTTCGGAATTACT 59.170 45.455 14.79 0.00 39.64 2.24
664 1705 3.242549 ACTTCCTCCGTTCGGAATTAC 57.757 47.619 14.79 0.00 39.64 1.89
665 1706 4.272489 TCTACTTCCTCCGTTCGGAATTA 58.728 43.478 14.79 1.22 39.64 1.40
666 1707 3.094572 TCTACTTCCTCCGTTCGGAATT 58.905 45.455 14.79 0.00 39.64 2.17
667 1708 2.731572 TCTACTTCCTCCGTTCGGAAT 58.268 47.619 14.79 2.09 39.64 3.01
668 1709 2.205022 TCTACTTCCTCCGTTCGGAA 57.795 50.000 14.79 0.00 38.18 4.30
669 1710 2.092538 AGATCTACTTCCTCCGTTCGGA 60.093 50.000 13.34 13.34 0.00 4.55
670 1711 2.291190 GAGATCTACTTCCTCCGTTCGG 59.709 54.545 4.74 4.74 0.00 4.30
671 1712 2.943690 TGAGATCTACTTCCTCCGTTCG 59.056 50.000 0.00 0.00 0.00 3.95
672 1713 3.949113 ACTGAGATCTACTTCCTCCGTTC 59.051 47.826 0.00 0.00 0.00 3.95
673 1714 3.949113 GACTGAGATCTACTTCCTCCGTT 59.051 47.826 0.00 0.00 0.00 4.44
674 1715 3.054287 TGACTGAGATCTACTTCCTCCGT 60.054 47.826 0.00 0.00 0.00 4.69
675 1716 3.546724 TGACTGAGATCTACTTCCTCCG 58.453 50.000 0.00 0.00 0.00 4.63
676 1717 6.478512 AAATGACTGAGATCTACTTCCTCC 57.521 41.667 0.00 0.00 0.00 4.30
677 1718 9.528018 CTTAAAATGACTGAGATCTACTTCCTC 57.472 37.037 0.00 0.00 0.00 3.71
678 1719 8.482128 CCTTAAAATGACTGAGATCTACTTCCT 58.518 37.037 0.00 0.00 0.00 3.36
679 1720 8.478877 TCCTTAAAATGACTGAGATCTACTTCC 58.521 37.037 0.00 0.00 0.00 3.46
680 1721 9.877178 TTCCTTAAAATGACTGAGATCTACTTC 57.123 33.333 0.00 0.00 0.00 3.01
704 1745 7.809806 CAGTCTGTGTTTTCCCTCATATTTTTC 59.190 37.037 0.00 0.00 0.00 2.29
710 1751 3.650942 ACCAGTCTGTGTTTTCCCTCATA 59.349 43.478 0.00 0.00 0.00 2.15
717 1758 2.288666 TGCTCACCAGTCTGTGTTTTC 58.711 47.619 0.00 0.00 37.51 2.29
722 1763 2.245159 TCTTTGCTCACCAGTCTGTG 57.755 50.000 0.00 0.00 37.59 3.66
729 1770 3.818210 TCGCTAATTTTCTTTGCTCACCA 59.182 39.130 0.00 0.00 0.00 4.17
732 1773 8.458052 TCATTAATCGCTAATTTTCTTTGCTCA 58.542 29.630 0.00 0.00 0.00 4.26
788 1829 6.321181 AGGTTGTTGTGAATTGTGAACTACAT 59.679 34.615 0.00 0.00 39.48 2.29
796 1840 4.336433 AGTGAGAGGTTGTTGTGAATTGTG 59.664 41.667 0.00 0.00 0.00 3.33
901 1985 1.485480 GGGTAGGTAGGCAGAAGGAAC 59.515 57.143 0.00 0.00 0.00 3.62
905 1990 0.326238 TGGGGGTAGGTAGGCAGAAG 60.326 60.000 0.00 0.00 0.00 2.85
921 2006 4.354943 AGGTGAGGGGGAGGTGGG 62.355 72.222 0.00 0.00 0.00 4.61
942 2032 5.657745 TCTGGGTACGATTTGGTATCTGTTA 59.342 40.000 0.00 0.00 0.00 2.41
983 2073 5.643379 TGGCATACAAGTGAGAAAATTCC 57.357 39.130 0.00 0.00 0.00 3.01
1088 2180 9.011095 ACGAGTACTACTGCATACATAATACAT 57.989 33.333 0.00 0.00 0.00 2.29
1112 2204 4.430007 TGATGATTAACCGGAAAGAGACG 58.570 43.478 9.46 0.00 0.00 4.18
1192 2286 2.719739 CAGAGTTCTTGCATCACCCAT 58.280 47.619 0.00 0.00 0.00 4.00
1389 2497 4.019860 AGGAAATGGGGATCTATCATCACG 60.020 45.833 0.00 0.00 0.00 4.35
1399 2507 3.746492 CGTTCGAATAGGAAATGGGGATC 59.254 47.826 0.00 0.00 0.00 3.36
1447 2555 6.916360 TTGCTTTTAAGATTTCCACTCCAT 57.084 33.333 0.00 0.00 0.00 3.41
1449 2557 7.872483 TCAAATTGCTTTTAAGATTTCCACTCC 59.128 33.333 0.00 0.00 0.00 3.85
1479 2590 6.765512 CTTCCTGAAGAAAGAGTTTTGACTCT 59.234 38.462 3.34 3.34 43.29 3.24
1480 2591 6.763610 TCTTCCTGAAGAAAGAGTTTTGACTC 59.236 38.462 7.12 0.00 43.79 3.36
1482 2593 6.927294 TCTTCCTGAAGAAAGAGTTTTGAC 57.073 37.500 7.12 0.00 43.79 3.18
1506 3993 0.593128 CGAGGGCTTTGTTTCAGTGG 59.407 55.000 0.00 0.00 0.00 4.00
1507 3994 0.040067 GCGAGGGCTTTGTTTCAGTG 60.040 55.000 0.00 0.00 35.83 3.66
1531 4018 3.446873 TGAAAGCTGAGAAGGTGCAAAAA 59.553 39.130 0.00 0.00 0.00 1.94
1579 4067 0.615331 TCTGAGTGTTGAGGGGCATC 59.385 55.000 0.00 0.00 0.00 3.91
1582 4070 2.087646 GAAATCTGAGTGTTGAGGGGC 58.912 52.381 0.00 0.00 0.00 5.80
1591 4079 5.303971 AGTCCACTTCAAGAAATCTGAGTG 58.696 41.667 0.00 11.75 34.63 3.51
1592 4080 5.559148 AGTCCACTTCAAGAAATCTGAGT 57.441 39.130 0.00 0.00 0.00 3.41
1593 4081 8.040132 AGATTAGTCCACTTCAAGAAATCTGAG 58.960 37.037 0.00 0.00 32.68 3.35
1595 4083 7.972527 CAGATTAGTCCACTTCAAGAAATCTG 58.027 38.462 10.90 10.90 41.26 2.90
1596 4084 7.684529 ACAGATTAGTCCACTTCAAGAAATCT 58.315 34.615 0.00 0.00 33.82 2.40
1597 4085 7.201478 CGACAGATTAGTCCACTTCAAGAAATC 60.201 40.741 0.00 0.00 35.07 2.17
1623 4112 0.889186 TTCGCCTCCAAGAAAGCACC 60.889 55.000 0.00 0.00 0.00 5.01
1633 4122 0.461339 GGCTCGTAATTTCGCCTCCA 60.461 55.000 0.00 0.00 39.42 3.86
1745 4234 1.003580 CACCAAGGGCACACTGTATCT 59.996 52.381 0.00 0.00 0.00 1.98
1866 4355 4.827692 ACACCGTGCTGATAAGAATTGTA 58.172 39.130 0.00 0.00 0.00 2.41
1940 4429 2.290896 CCTTAGGTGCATCAGGGTTCAA 60.291 50.000 0.00 0.00 0.00 2.69
2102 4591 2.487762 TCTGCAAAAATAGGACGGCAAG 59.512 45.455 0.00 0.00 0.00 4.01
2202 4691 6.586344 CACTGAAGACCCATAGACATAATGT 58.414 40.000 0.00 0.00 0.00 2.71
2206 4695 4.030216 TGCACTGAAGACCCATAGACATA 58.970 43.478 0.00 0.00 0.00 2.29
2211 4700 2.625737 CAGTGCACTGAAGACCCATAG 58.374 52.381 38.12 9.48 46.59 2.23
2510 4999 4.013728 TGTCAGTACCAAAAGCAGTTGTT 58.986 39.130 0.00 0.00 0.00 2.83
2534 5023 6.619744 CCATTACAAACACAGAATATGCACA 58.380 36.000 0.00 0.00 0.00 4.57
2535 5024 5.516339 GCCATTACAAACACAGAATATGCAC 59.484 40.000 0.00 0.00 0.00 4.57
2580 5071 1.123928 CAGAGGAATAACGGGGCTCT 58.876 55.000 0.00 0.00 0.00 4.09
2581 5072 0.533085 GCAGAGGAATAACGGGGCTC 60.533 60.000 0.00 0.00 0.00 4.70
2600 5091 7.310664 TGTCTAGGTTACAATACAGTTTCTCG 58.689 38.462 0.00 0.00 0.00 4.04
2618 5109 5.121811 AGCTAGTGCAATGAAATGTCTAGG 58.878 41.667 0.00 0.00 42.74 3.02
2684 5175 8.559536 CACATGCGAAGGTGTATTCTTAATATT 58.440 33.333 0.00 0.00 0.00 1.28
2760 5773 7.206687 GTCATCAAAAACCATGTGTTAAAGGA 58.793 34.615 0.00 0.00 35.67 3.36
2978 5991 6.763610 TGGGACAGTTTTAATTCGCAATTTTT 59.236 30.769 0.52 0.00 32.38 1.94
3004 6017 2.735762 CGAACAGCTTACTCTGGTAGCC 60.736 54.545 0.00 0.00 38.36 3.93
3127 6141 9.485206 CTTCACAGATTTGGAAAATGAATTTCT 57.515 29.630 0.00 0.00 45.57 2.52
3423 6437 6.313519 AGTCACTTAATTGGATAAGAGGCA 57.686 37.500 1.38 0.00 36.57 4.75
3436 6450 8.743085 AAGATATCATGCACAAGTCACTTAAT 57.257 30.769 5.32 0.00 0.00 1.40
3748 6765 9.929180 TCCTAATCTATTTCTCCAATTATCACG 57.071 33.333 0.00 0.00 0.00 4.35
3754 6771 7.820532 AGCCTTCCTAATCTATTTCTCCAATT 58.179 34.615 0.00 0.00 0.00 2.32
3942 6983 4.345854 AGGAACGGAGGGAGTATATCATC 58.654 47.826 0.00 0.00 0.00 2.92
3951 6992 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3952 6993 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3953 6994 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3954 6995 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3955 6996 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3956 6997 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3957 6998 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3972 7013 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
3984 7025 9.639601 CTCTGTATGTAGTCACTTGTTGAAATA 57.360 33.333 0.00 0.00 35.39 1.40
3985 7026 7.118390 GCTCTGTATGTAGTCACTTGTTGAAAT 59.882 37.037 0.00 0.00 35.39 2.17
3986 7027 6.423905 GCTCTGTATGTAGTCACTTGTTGAAA 59.576 38.462 0.00 0.00 35.39 2.69
3987 7028 5.926542 GCTCTGTATGTAGTCACTTGTTGAA 59.073 40.000 0.00 0.00 35.39 2.69
3988 7029 5.010617 TGCTCTGTATGTAGTCACTTGTTGA 59.989 40.000 0.00 0.00 0.00 3.18
3989 7030 5.230182 TGCTCTGTATGTAGTCACTTGTTG 58.770 41.667 0.00 0.00 0.00 3.33
3990 7031 5.468540 TGCTCTGTATGTAGTCACTTGTT 57.531 39.130 0.00 0.00 0.00 2.83
3991 7032 5.468540 TTGCTCTGTATGTAGTCACTTGT 57.531 39.130 0.00 0.00 0.00 3.16
3992 7033 6.785488 TTTTGCTCTGTATGTAGTCACTTG 57.215 37.500 0.00 0.00 0.00 3.16
3993 7034 7.161404 TCATTTTGCTCTGTATGTAGTCACTT 58.839 34.615 0.00 0.00 0.00 3.16
3994 7035 6.701340 TCATTTTGCTCTGTATGTAGTCACT 58.299 36.000 0.00 0.00 0.00 3.41
3995 7036 6.591834 ACTCATTTTGCTCTGTATGTAGTCAC 59.408 38.462 0.00 0.00 0.00 3.67
3996 7037 6.591448 CACTCATTTTGCTCTGTATGTAGTCA 59.409 38.462 0.00 0.00 0.00 3.41
3997 7038 6.813649 TCACTCATTTTGCTCTGTATGTAGTC 59.186 38.462 0.00 0.00 0.00 2.59
3998 7039 6.701340 TCACTCATTTTGCTCTGTATGTAGT 58.299 36.000 0.00 0.00 0.00 2.73
3999 7040 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
4000 7041 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
4001 7042 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
4002 7043 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
4003 7044 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
4004 7045 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
4005 7046 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
4006 7047 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
4007 7048 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
4008 7049 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4009 7050 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
4010 7051 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
4047 7088 6.665992 AATGACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
4048 7089 6.097129 TCAAATGACTACCACATACGGATGTA 59.903 38.462 14.23 0.00 44.82 2.29
4050 7091 5.356426 TCAAATGACTACCACATACGGATG 58.644 41.667 5.94 5.94 39.16 3.51
4051 7092 5.607939 TCAAATGACTACCACATACGGAT 57.392 39.130 0.00 0.00 0.00 4.18
4052 7093 5.408880 TTCAAATGACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
4053 7094 6.093495 ACATTTCAAATGACTACCACATACGG 59.907 38.462 17.30 0.00 0.00 4.02
4054 7095 7.064609 AGACATTTCAAATGACTACCACATACG 59.935 37.037 17.30 0.00 0.00 3.06
4055 7096 8.268850 AGACATTTCAAATGACTACCACATAC 57.731 34.615 17.30 0.00 0.00 2.39
4056 7097 9.599866 CTAGACATTTCAAATGACTACCACATA 57.400 33.333 17.30 0.00 0.00 2.29
4057 7098 8.321353 TCTAGACATTTCAAATGACTACCACAT 58.679 33.333 17.30 0.00 0.00 3.21
4058 7099 7.676004 TCTAGACATTTCAAATGACTACCACA 58.324 34.615 17.30 0.05 0.00 4.17
4059 7100 8.547967 TTCTAGACATTTCAAATGACTACCAC 57.452 34.615 17.30 0.12 0.00 4.16
4060 7101 9.219603 CTTTCTAGACATTTCAAATGACTACCA 57.780 33.333 17.30 5.07 0.00 3.25
4061 7102 9.436957 TCTTTCTAGACATTTCAAATGACTACC 57.563 33.333 17.30 1.06 0.00 3.18
4078 7119 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4079 7120 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4080 7121 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4081 7122 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4082 7123 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4083 7124 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4084 7125 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4085 7126 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4086 7127 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4087 7128 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4088 7129 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4089 7130 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4090 7131 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
4091 7132 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
4092 7133 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
4093 7134 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
4094 7135 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
4095 7136 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
4096 7137 3.744940 TTTCTACTCCCTCCGTTCCTA 57.255 47.619 0.00 0.00 0.00 2.94
4097 7138 2.617840 TTTCTACTCCCTCCGTTCCT 57.382 50.000 0.00 0.00 0.00 3.36
4098 7139 3.908643 ATTTTCTACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
4099 7140 6.041511 GTCTAATTTTCTACTCCCTCCGTTC 58.958 44.000 0.00 0.00 0.00 3.95
4100 7141 5.482878 TGTCTAATTTTCTACTCCCTCCGTT 59.517 40.000 0.00 0.00 0.00 4.44
4101 7142 5.021458 TGTCTAATTTTCTACTCCCTCCGT 58.979 41.667 0.00 0.00 0.00 4.69
4102 7143 5.105473 TGTGTCTAATTTTCTACTCCCTCCG 60.105 44.000 0.00 0.00 0.00 4.63
4103 7144 6.295719 TGTGTCTAATTTTCTACTCCCTCC 57.704 41.667 0.00 0.00 0.00 4.30
4104 7145 7.878644 ACTTTGTGTCTAATTTTCTACTCCCTC 59.121 37.037 0.00 0.00 0.00 4.30
4105 7146 7.746703 ACTTTGTGTCTAATTTTCTACTCCCT 58.253 34.615 0.00 0.00 0.00 4.20
4106 7147 7.981102 ACTTTGTGTCTAATTTTCTACTCCC 57.019 36.000 0.00 0.00 0.00 4.30
4109 7150 9.555727 TGCTTACTTTGTGTCTAATTTTCTACT 57.444 29.630 0.00 0.00 0.00 2.57
4177 7221 7.776030 TGTTCCACATTTCAGTTTAGGTTAAGA 59.224 33.333 0.00 0.00 0.00 2.10
4254 7302 5.698089 TGTCATCTGTTCAGTTCTGTGATTC 59.302 40.000 0.00 0.00 0.00 2.52
4263 7311 5.423610 AGGTATAGCTGTCATCTGTTCAGTT 59.576 40.000 3.03 0.00 0.00 3.16
4265 7313 5.528043 AGGTATAGCTGTCATCTGTTCAG 57.472 43.478 3.03 0.00 0.00 3.02
4325 7375 8.612619 ACAGGAAAAATACTTAATGCTCGTATG 58.387 33.333 0.00 0.00 0.00 2.39
4327 7377 8.447833 CAACAGGAAAAATACTTAATGCTCGTA 58.552 33.333 0.00 0.00 0.00 3.43
4330 7380 6.251376 CGCAACAGGAAAAATACTTAATGCTC 59.749 38.462 0.00 0.00 0.00 4.26
4358 7408 5.151389 GTCGTTCGCTATTTGGATTTTTGT 58.849 37.500 0.00 0.00 0.00 2.83
4359 7409 5.150683 TGTCGTTCGCTATTTGGATTTTTG 58.849 37.500 0.00 0.00 0.00 2.44
4360 7410 5.365403 TGTCGTTCGCTATTTGGATTTTT 57.635 34.783 0.00 0.00 0.00 1.94
4361 7411 4.142687 CCTGTCGTTCGCTATTTGGATTTT 60.143 41.667 0.00 0.00 0.00 1.82
4362 7412 3.374058 CCTGTCGTTCGCTATTTGGATTT 59.626 43.478 0.00 0.00 0.00 2.17
4363 7413 2.936498 CCTGTCGTTCGCTATTTGGATT 59.064 45.455 0.00 0.00 0.00 3.01
4367 7417 0.373716 GGCCTGTCGTTCGCTATTTG 59.626 55.000 0.00 0.00 0.00 2.32
4375 7425 1.079503 CTTTGCTAGGCCTGTCGTTC 58.920 55.000 17.99 0.00 0.00 3.95
4392 7442 1.537397 TGGAGAGCCTCTGCCACTT 60.537 57.895 10.97 0.00 38.69 3.16
4409 7459 2.554032 CAAGACCTTTAGGCCACAAGTG 59.446 50.000 5.01 3.43 39.32 3.16
4410 7460 2.489073 CCAAGACCTTTAGGCCACAAGT 60.489 50.000 5.01 0.00 39.32 3.16
4411 7461 2.162681 CCAAGACCTTTAGGCCACAAG 58.837 52.381 5.01 6.20 39.32 3.16
4412 7462 1.203001 CCCAAGACCTTTAGGCCACAA 60.203 52.381 5.01 0.00 39.32 3.33
4413 7463 0.404040 CCCAAGACCTTTAGGCCACA 59.596 55.000 5.01 0.00 39.32 4.17
4414 7464 0.404426 ACCCAAGACCTTTAGGCCAC 59.596 55.000 5.01 0.00 39.32 5.01
4415 7465 0.696501 GACCCAAGACCTTTAGGCCA 59.303 55.000 5.01 0.00 39.32 5.36
4416 7466 0.034380 GGACCCAAGACCTTTAGGCC 60.034 60.000 0.00 0.00 39.32 5.19
4417 7467 0.392595 CGGACCCAAGACCTTTAGGC 60.393 60.000 0.00 0.00 39.32 3.93
4418 7468 1.272807 TCGGACCCAAGACCTTTAGG 58.727 55.000 0.00 0.00 42.17 2.69
4419 7469 3.055385 TGATTCGGACCCAAGACCTTTAG 60.055 47.826 0.00 0.00 0.00 1.85
4420 7470 2.907696 TGATTCGGACCCAAGACCTTTA 59.092 45.455 0.00 0.00 0.00 1.85
4421 7471 1.702957 TGATTCGGACCCAAGACCTTT 59.297 47.619 0.00 0.00 0.00 3.11
4422 7472 1.279271 CTGATTCGGACCCAAGACCTT 59.721 52.381 0.00 0.00 0.00 3.50
4423 7473 0.905357 CTGATTCGGACCCAAGACCT 59.095 55.000 0.00 0.00 0.00 3.85
4424 7474 0.613777 ACTGATTCGGACCCAAGACC 59.386 55.000 0.00 0.00 0.00 3.85
4425 7475 1.550976 AGACTGATTCGGACCCAAGAC 59.449 52.381 0.00 0.00 0.00 3.01
4426 7476 1.825474 GAGACTGATTCGGACCCAAGA 59.175 52.381 0.00 0.00 0.00 3.02
4427 7477 1.550524 TGAGACTGATTCGGACCCAAG 59.449 52.381 0.00 0.00 0.00 3.61
4428 7478 1.639722 TGAGACTGATTCGGACCCAA 58.360 50.000 0.00 0.00 0.00 4.12
4429 7479 1.866015 ATGAGACTGATTCGGACCCA 58.134 50.000 0.00 0.00 0.00 4.51
4430 7480 2.555199 CAATGAGACTGATTCGGACCC 58.445 52.381 0.00 0.00 0.00 4.46
4431 7481 1.936547 GCAATGAGACTGATTCGGACC 59.063 52.381 0.00 0.00 0.00 4.46
4432 7482 2.606725 CTGCAATGAGACTGATTCGGAC 59.393 50.000 0.00 0.00 0.00 4.79
4433 7483 2.497273 TCTGCAATGAGACTGATTCGGA 59.503 45.455 0.00 0.00 0.00 4.55
4434 7484 2.897436 TCTGCAATGAGACTGATTCGG 58.103 47.619 0.00 0.00 0.00 4.30
4435 7485 5.481200 AATTCTGCAATGAGACTGATTCG 57.519 39.130 0.00 0.00 0.00 3.34
4438 7488 8.512956 GCATAATAATTCTGCAATGAGACTGAT 58.487 33.333 0.00 0.00 35.96 2.90
4439 7489 7.499895 TGCATAATAATTCTGCAATGAGACTGA 59.500 33.333 3.13 0.00 42.53 3.41
4440 7490 7.645402 TGCATAATAATTCTGCAATGAGACTG 58.355 34.615 3.13 0.00 42.53 3.51
4441 7491 7.812690 TGCATAATAATTCTGCAATGAGACT 57.187 32.000 3.13 0.00 42.53 3.24
4449 7499 6.265196 CCTTACCCTTGCATAATAATTCTGCA 59.735 38.462 1.56 1.56 43.69 4.41
4450 7500 6.681777 CCTTACCCTTGCATAATAATTCTGC 58.318 40.000 0.00 0.00 36.45 4.26
4451 7501 6.491403 AGCCTTACCCTTGCATAATAATTCTG 59.509 38.462 0.00 0.00 0.00 3.02
4452 7502 6.491403 CAGCCTTACCCTTGCATAATAATTCT 59.509 38.462 0.00 0.00 0.00 2.40
4453 7503 6.265422 ACAGCCTTACCCTTGCATAATAATTC 59.735 38.462 0.00 0.00 0.00 2.17
4454 7504 6.136155 ACAGCCTTACCCTTGCATAATAATT 58.864 36.000 0.00 0.00 0.00 1.40
4455 7505 5.705400 ACAGCCTTACCCTTGCATAATAAT 58.295 37.500 0.00 0.00 0.00 1.28
4456 7506 5.104109 AGACAGCCTTACCCTTGCATAATAA 60.104 40.000 0.00 0.00 0.00 1.40
4457 7507 4.412199 AGACAGCCTTACCCTTGCATAATA 59.588 41.667 0.00 0.00 0.00 0.98
4458 7508 3.203040 AGACAGCCTTACCCTTGCATAAT 59.797 43.478 0.00 0.00 0.00 1.28
4459 7509 2.576191 AGACAGCCTTACCCTTGCATAA 59.424 45.455 0.00 0.00 0.00 1.90
4460 7510 2.196595 AGACAGCCTTACCCTTGCATA 58.803 47.619 0.00 0.00 0.00 3.14
4461 7511 0.995024 AGACAGCCTTACCCTTGCAT 59.005 50.000 0.00 0.00 0.00 3.96
4462 7512 1.555075 CTAGACAGCCTTACCCTTGCA 59.445 52.381 0.00 0.00 0.00 4.08
4463 7513 1.555533 ACTAGACAGCCTTACCCTTGC 59.444 52.381 0.00 0.00 0.00 4.01
4464 7514 5.615925 ATTACTAGACAGCCTTACCCTTG 57.384 43.478 0.00 0.00 0.00 3.61
4465 7515 5.130643 GGAATTACTAGACAGCCTTACCCTT 59.869 44.000 0.00 0.00 0.00 3.95
4466 7516 4.654724 GGAATTACTAGACAGCCTTACCCT 59.345 45.833 0.00 0.00 0.00 4.34
4467 7517 4.501058 CGGAATTACTAGACAGCCTTACCC 60.501 50.000 0.00 0.00 0.00 3.69
4468 7518 4.340381 TCGGAATTACTAGACAGCCTTACC 59.660 45.833 0.00 0.00 0.00 2.85
4469 7519 5.511234 TCGGAATTACTAGACAGCCTTAC 57.489 43.478 0.00 0.00 0.00 2.34
4470 7520 6.534475 TTTCGGAATTACTAGACAGCCTTA 57.466 37.500 0.00 0.00 0.00 2.69
4471 7521 5.416271 TTTCGGAATTACTAGACAGCCTT 57.584 39.130 0.00 0.00 0.00 4.35
4472 7522 5.615925 ATTTCGGAATTACTAGACAGCCT 57.384 39.130 0.00 0.00 0.00 4.58
4473 7523 5.236695 GGAATTTCGGAATTACTAGACAGCC 59.763 44.000 3.93 0.00 35.65 4.85
4474 7524 5.236695 GGGAATTTCGGAATTACTAGACAGC 59.763 44.000 11.27 0.00 36.50 4.40
4475 7525 6.583562 AGGGAATTTCGGAATTACTAGACAG 58.416 40.000 11.27 0.00 36.50 3.51
4476 7526 6.555463 AGGGAATTTCGGAATTACTAGACA 57.445 37.500 11.27 0.00 36.50 3.41
4477 7527 6.482641 GGAAGGGAATTTCGGAATTACTAGAC 59.517 42.308 11.27 1.59 36.50 2.59
4478 7528 6.408891 GGGAAGGGAATTTCGGAATTACTAGA 60.409 42.308 11.27 0.00 36.50 2.43
4479 7529 5.763698 GGGAAGGGAATTTCGGAATTACTAG 59.236 44.000 11.27 0.00 36.50 2.57
4480 7530 5.430745 AGGGAAGGGAATTTCGGAATTACTA 59.569 40.000 11.27 0.00 36.50 1.82
4481 7531 4.229812 AGGGAAGGGAATTTCGGAATTACT 59.770 41.667 11.27 5.77 36.50 2.24
4482 7532 4.533815 AGGGAAGGGAATTTCGGAATTAC 58.466 43.478 2.37 2.37 35.65 1.89
4483 7533 4.873724 AGGGAAGGGAATTTCGGAATTA 57.126 40.909 0.46 0.00 35.65 1.40
4484 7534 3.757947 AGGGAAGGGAATTTCGGAATT 57.242 42.857 0.00 0.00 38.16 2.17
4485 7535 4.045022 TCTAGGGAAGGGAATTTCGGAAT 58.955 43.478 0.00 0.00 0.00 3.01
4486 7536 3.199289 GTCTAGGGAAGGGAATTTCGGAA 59.801 47.826 0.00 0.00 0.00 4.30
4487 7537 2.770232 GTCTAGGGAAGGGAATTTCGGA 59.230 50.000 0.00 0.00 0.00 4.55
4488 7538 2.483188 CGTCTAGGGAAGGGAATTTCGG 60.483 54.545 0.00 0.00 0.00 4.30
4489 7539 2.483188 CCGTCTAGGGAAGGGAATTTCG 60.483 54.545 0.00 0.00 37.44 3.46
4490 7540 2.504585 ACCGTCTAGGGAAGGGAATTTC 59.495 50.000 0.00 0.00 46.96 2.17
4491 7541 2.558974 ACCGTCTAGGGAAGGGAATTT 58.441 47.619 0.00 0.00 46.96 1.82
4492 7542 2.265526 ACCGTCTAGGGAAGGGAATT 57.734 50.000 0.00 0.00 46.96 2.17
4493 7543 2.265526 AACCGTCTAGGGAAGGGAAT 57.734 50.000 0.00 0.00 46.96 3.01
4494 7544 2.312741 TCTAACCGTCTAGGGAAGGGAA 59.687 50.000 0.00 0.00 46.96 3.97
4495 7545 1.925255 TCTAACCGTCTAGGGAAGGGA 59.075 52.381 0.00 0.00 46.96 4.20
4496 7546 2.030371 GTCTAACCGTCTAGGGAAGGG 58.970 57.143 0.00 0.00 46.96 3.95
4497 7547 2.030371 GGTCTAACCGTCTAGGGAAGG 58.970 57.143 0.00 0.00 46.96 3.46
4498 7548 2.030371 GGGTCTAACCGTCTAGGGAAG 58.970 57.143 0.00 0.00 46.96 3.46
4499 7549 1.342374 GGGGTCTAACCGTCTAGGGAA 60.342 57.143 0.00 0.00 46.96 3.97
4500 7550 0.259938 GGGGTCTAACCGTCTAGGGA 59.740 60.000 0.00 0.00 46.96 4.20
4501 7551 0.032813 TGGGGTCTAACCGTCTAGGG 60.033 60.000 0.00 0.00 46.96 3.53
4506 7556 1.553704 ACAAGATGGGGTCTAACCGTC 59.446 52.381 0.00 0.00 43.00 4.79
4507 7557 1.278127 CACAAGATGGGGTCTAACCGT 59.722 52.381 0.00 0.00 39.83 4.83
4508 7558 2.012051 GCACAAGATGGGGTCTAACCG 61.012 57.143 0.00 0.00 39.83 4.44
4509 7559 1.751437 GCACAAGATGGGGTCTAACC 58.249 55.000 0.00 0.00 35.67 2.85
4510 7560 1.338769 ACGCACAAGATGGGGTCTAAC 60.339 52.381 0.00 0.00 45.48 2.34
4511 7561 0.981183 ACGCACAAGATGGGGTCTAA 59.019 50.000 0.00 0.00 45.48 2.10
4512 7562 0.535335 GACGCACAAGATGGGGTCTA 59.465 55.000 0.00 0.00 45.48 2.59
4513 7563 1.296715 GACGCACAAGATGGGGTCT 59.703 57.895 0.00 0.00 45.48 3.85
4514 7564 1.745489 GGACGCACAAGATGGGGTC 60.745 63.158 0.00 0.00 45.48 4.46
4515 7565 2.351276 GGACGCACAAGATGGGGT 59.649 61.111 0.00 0.00 45.48 4.95
4516 7566 2.438434 GGGACGCACAAGATGGGG 60.438 66.667 0.00 0.00 45.48 4.96
4517 7567 0.680921 AATGGGACGCACAAGATGGG 60.681 55.000 0.00 0.00 46.60 4.00
4518 7568 0.734889 GAATGGGACGCACAAGATGG 59.265 55.000 0.00 0.00 0.00 3.51
4519 7569 1.742761 AGAATGGGACGCACAAGATG 58.257 50.000 0.00 0.00 0.00 2.90
4520 7570 2.496899 AAGAATGGGACGCACAAGAT 57.503 45.000 0.00 0.00 0.00 2.40
4521 7571 2.151202 GAAAGAATGGGACGCACAAGA 58.849 47.619 0.00 0.00 0.00 3.02
4522 7572 1.135972 CGAAAGAATGGGACGCACAAG 60.136 52.381 0.00 0.00 0.00 3.16
4523 7573 0.871722 CGAAAGAATGGGACGCACAA 59.128 50.000 0.00 0.00 0.00 3.33
4524 7574 0.034198 TCGAAAGAATGGGACGCACA 59.966 50.000 0.00 0.00 37.03 4.57
4525 7575 2.835605 TCGAAAGAATGGGACGCAC 58.164 52.632 0.00 0.00 37.03 5.34
4537 7587 8.072567 CCTCTGCTATTTGGATTTTATCGAAAG 58.927 37.037 0.00 0.00 39.70 2.62
4538 7588 7.773224 TCCTCTGCTATTTGGATTTTATCGAAA 59.227 33.333 0.00 0.00 40.43 3.46
4539 7589 7.279615 TCCTCTGCTATTTGGATTTTATCGAA 58.720 34.615 0.00 0.00 0.00 3.71
4540 7590 6.826668 TCCTCTGCTATTTGGATTTTATCGA 58.173 36.000 0.00 0.00 0.00 3.59
4541 7591 7.496529 TTCCTCTGCTATTTGGATTTTATCG 57.503 36.000 0.00 0.00 0.00 2.92
4544 7594 9.253832 TCATTTTCCTCTGCTATTTGGATTTTA 57.746 29.630 0.00 0.00 0.00 1.52
4545 7595 8.137745 TCATTTTCCTCTGCTATTTGGATTTT 57.862 30.769 0.00 0.00 0.00 1.82
4546 7596 7.722949 TCATTTTCCTCTGCTATTTGGATTT 57.277 32.000 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.