Multiple sequence alignment - TraesCS7B01G144500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G144500 chr7B 100.000 4262 0 0 1819 6080 186819685 186815424 0.000000e+00 7871.0
1 TraesCS7B01G144500 chr7B 100.000 1507 0 0 1 1507 186821503 186819997 0.000000e+00 2784.0
2 TraesCS7B01G144500 chr7B 89.831 59 4 2 519 576 183877779 183877836 2.350000e-09 75.0
3 TraesCS7B01G144500 chr7B 100.000 30 0 0 625 654 237497726 237497755 8.510000e-04 56.5
4 TraesCS7B01G144500 chr7A 95.626 2538 77 20 3556 6080 226755398 226757914 0.000000e+00 4041.0
5 TraesCS7B01G144500 chr7A 95.510 1069 36 9 2452 3512 226753999 226755063 0.000000e+00 1698.0
6 TraesCS7B01G144500 chr7A 91.102 944 41 17 597 1507 226752306 226753239 0.000000e+00 1238.0
7 TraesCS7B01G144500 chr7A 94.716 511 23 4 1948 2456 226753432 226753940 0.000000e+00 791.0
8 TraesCS7B01G144500 chr7A 93.038 158 11 0 448 605 226751965 226752122 1.320000e-56 231.0
9 TraesCS7B01G144500 chr7A 91.818 110 9 0 1839 1948 226753242 226753351 2.930000e-33 154.0
10 TraesCS7B01G144500 chr7A 89.831 59 4 2 519 576 229604333 229604276 2.350000e-09 75.0
11 TraesCS7B01G144500 chr7D 95.511 2562 51 14 3556 6080 214350997 214353531 0.000000e+00 4036.0
12 TraesCS7B01G144500 chr7D 96.221 1085 29 8 2448 3527 214349653 214350730 0.000000e+00 1766.0
13 TraesCS7B01G144500 chr7D 93.544 821 36 8 407 1217 214347743 214348556 0.000000e+00 1206.0
14 TraesCS7B01G144500 chr7D 90.079 635 34 15 1834 2456 214348917 214349534 0.000000e+00 797.0
15 TraesCS7B01G144500 chr7D 97.600 250 6 0 1258 1507 214348670 214348919 4.350000e-116 429.0
16 TraesCS7B01G144500 chr7D 88.991 109 11 1 257 365 214342421 214342528 3.820000e-27 134.0
17 TraesCS7B01G144500 chr7D 89.831 59 4 2 519 576 216836515 216836458 2.350000e-09 75.0
18 TraesCS7B01G144500 chr3B 83.684 190 31 0 1305 1494 733748962 733749151 4.840000e-41 180.0
19 TraesCS7B01G144500 chr3B 85.246 61 6 3 2309 2368 477364328 477364270 6.580000e-05 60.2
20 TraesCS7B01G144500 chr3D 82.632 190 33 0 1305 1494 552879000 552879189 1.050000e-37 169.0
21 TraesCS7B01G144500 chr3A 82.632 190 33 0 1305 1494 689132551 689132740 1.050000e-37 169.0
22 TraesCS7B01G144500 chr2D 91.667 72 6 0 2270 2341 578682826 578682897 3.880000e-17 100.0
23 TraesCS7B01G144500 chr2D 96.774 31 1 0 630 660 309065596 309065566 1.100000e-02 52.8
24 TraesCS7B01G144500 chr5D 78.912 147 19 7 2226 2369 552444626 552444763 8.390000e-14 89.8
25 TraesCS7B01G144500 chr6D 93.220 59 4 0 2308 2366 450126342 450126284 3.020000e-13 87.9
26 TraesCS7B01G144500 chr1B 89.062 64 6 1 2304 2367 488397434 488397372 1.820000e-10 78.7
27 TraesCS7B01G144500 chr1B 83.333 66 8 3 2304 2368 10338226 10338163 2.370000e-04 58.4
28 TraesCS7B01G144500 chr1A 87.931 58 5 2 2280 2336 295465466 295465410 3.930000e-07 67.6
29 TraesCS7B01G144500 chr4D 100.000 30 0 0 625 654 151408837 151408808 8.510000e-04 56.5
30 TraesCS7B01G144500 chr2A 96.875 32 1 0 624 655 430705463 430705494 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G144500 chr7B 186815424 186821503 6079 True 5327.500000 7871 100.000 1 6080 2 chr7B.!!$R1 6079
1 TraesCS7B01G144500 chr7A 226751965 226757914 5949 False 1358.833333 4041 93.635 448 6080 6 chr7A.!!$F1 5632
2 TraesCS7B01G144500 chr7D 214347743 214353531 5788 False 1646.800000 4036 94.591 407 6080 5 chr7D.!!$F2 5673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.179073 GTAGCCTCATGGTGCATCGT 60.179 55.0 9.54 0.00 35.27 3.73 F
1186 1395 0.033504 CAAGGCTCCGGTGCGTATAT 59.966 55.0 22.49 6.12 0.00 0.86 F
1223 1432 0.163788 AACTTTTGCAGATCGACGCG 59.836 50.0 3.53 3.53 0.00 6.01 F
2144 2515 0.961358 TACCCCGGTTCCATTTTGCG 60.961 55.0 0.00 0.00 0.00 4.85 F
3136 3650 0.823356 TGGGACAAGCAAAGTCAGCC 60.823 55.0 5.72 0.00 37.74 4.85 F
3550 4066 0.336392 ATTCCTTCCTTTCCCCCTGC 59.664 55.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1245 1511 0.598680 GGATCGATTGCGTCAGGGAG 60.599 60.0 0.00 0.00 38.98 4.30 R
2086 2456 0.248907 AGATCATACGGCGACCAACG 60.249 55.0 16.62 0.00 45.66 4.10 R
2996 3507 1.187087 AAAGTAGGACTGCGCTAGCT 58.813 50.0 13.93 0.00 45.42 3.32 R
3543 4059 0.031817 AAAATCCCATCTGCAGGGGG 60.032 55.0 28.69 28.69 46.77 5.40 R
4830 5643 1.251251 GCTTGAGGGATGCAACAACT 58.749 50.0 0.00 0.00 0.00 3.16 R
5238 6051 2.289010 CCATGCTGGAACAAAAACCTCC 60.289 50.0 0.00 0.00 40.96 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.884465 CAATATAACTACAATTGCTAAGCTTCC 57.116 33.333 0.00 0.00 0.00 3.46
33 34 9.853177 AATATAACTACAATTGCTAAGCTTCCT 57.147 29.630 0.00 0.00 0.00 3.36
34 35 5.886960 AACTACAATTGCTAAGCTTCCTG 57.113 39.130 0.00 0.00 0.00 3.86
35 36 4.265073 ACTACAATTGCTAAGCTTCCTGG 58.735 43.478 0.00 0.00 0.00 4.45
36 37 3.160679 ACAATTGCTAAGCTTCCTGGT 57.839 42.857 0.00 0.00 0.00 4.00
37 38 4.301072 ACAATTGCTAAGCTTCCTGGTA 57.699 40.909 0.00 0.00 0.00 3.25
38 39 4.662278 ACAATTGCTAAGCTTCCTGGTAA 58.338 39.130 0.00 0.00 0.00 2.85
39 40 5.264395 ACAATTGCTAAGCTTCCTGGTAAT 58.736 37.500 0.00 0.96 0.00 1.89
40 41 5.126061 ACAATTGCTAAGCTTCCTGGTAATG 59.874 40.000 0.00 0.00 0.00 1.90
41 42 4.301072 TTGCTAAGCTTCCTGGTAATGT 57.699 40.909 0.00 0.00 0.00 2.71
42 43 5.429681 TTGCTAAGCTTCCTGGTAATGTA 57.570 39.130 0.00 0.00 0.00 2.29
43 44 5.023533 TGCTAAGCTTCCTGGTAATGTAG 57.976 43.478 0.00 0.00 0.00 2.74
44 45 3.810386 GCTAAGCTTCCTGGTAATGTAGC 59.190 47.826 0.00 0.00 0.00 3.58
45 46 3.283259 AAGCTTCCTGGTAATGTAGCC 57.717 47.619 0.00 0.00 0.00 3.93
46 47 2.482494 AGCTTCCTGGTAATGTAGCCT 58.518 47.619 0.00 0.00 0.00 4.58
47 48 2.436173 AGCTTCCTGGTAATGTAGCCTC 59.564 50.000 0.00 0.00 0.00 4.70
48 49 2.170607 GCTTCCTGGTAATGTAGCCTCA 59.829 50.000 0.00 0.00 0.00 3.86
49 50 3.181450 GCTTCCTGGTAATGTAGCCTCAT 60.181 47.826 0.00 0.00 0.00 2.90
50 51 4.384056 CTTCCTGGTAATGTAGCCTCATG 58.616 47.826 0.00 0.00 0.00 3.07
51 52 2.705658 TCCTGGTAATGTAGCCTCATGG 59.294 50.000 0.00 0.00 0.00 3.66
52 53 2.439507 CCTGGTAATGTAGCCTCATGGT 59.560 50.000 0.00 0.00 35.27 3.55
53 54 3.470709 CTGGTAATGTAGCCTCATGGTG 58.529 50.000 0.00 0.00 35.27 4.17
54 55 2.222027 GGTAATGTAGCCTCATGGTGC 58.778 52.381 0.00 0.00 35.27 5.01
55 56 2.421388 GGTAATGTAGCCTCATGGTGCA 60.421 50.000 9.54 0.00 41.35 4.57
57 58 2.267174 ATGTAGCCTCATGGTGCATC 57.733 50.000 9.54 0.00 43.08 3.91
58 59 0.179076 TGTAGCCTCATGGTGCATCG 60.179 55.000 9.54 0.00 31.85 3.84
59 60 0.179073 GTAGCCTCATGGTGCATCGT 60.179 55.000 9.54 0.00 35.27 3.73
60 61 0.179076 TAGCCTCATGGTGCATCGTG 60.179 55.000 13.27 13.27 35.27 4.35
61 62 2.475466 GCCTCATGGTGCATCGTGG 61.475 63.158 18.97 9.61 35.27 4.94
62 63 1.078214 CCTCATGGTGCATCGTGGT 60.078 57.895 18.97 0.00 0.00 4.16
63 64 0.677731 CCTCATGGTGCATCGTGGTT 60.678 55.000 18.97 0.00 0.00 3.67
64 65 0.448990 CTCATGGTGCATCGTGGTTG 59.551 55.000 18.97 6.38 0.00 3.77
65 66 0.959867 TCATGGTGCATCGTGGTTGG 60.960 55.000 18.97 0.00 0.00 3.77
66 67 0.959867 CATGGTGCATCGTGGTTGGA 60.960 55.000 11.59 0.00 0.00 3.53
67 68 0.677731 ATGGTGCATCGTGGTTGGAG 60.678 55.000 0.00 0.00 0.00 3.86
68 69 1.003839 GGTGCATCGTGGTTGGAGA 60.004 57.895 0.00 0.00 0.00 3.71
69 70 1.021390 GGTGCATCGTGGTTGGAGAG 61.021 60.000 0.00 0.00 0.00 3.20
70 71 1.375908 TGCATCGTGGTTGGAGAGC 60.376 57.895 0.00 0.00 0.00 4.09
71 72 2.456119 GCATCGTGGTTGGAGAGCG 61.456 63.158 0.00 0.00 0.00 5.03
72 73 1.811266 CATCGTGGTTGGAGAGCGG 60.811 63.158 0.00 0.00 0.00 5.52
73 74 2.283529 ATCGTGGTTGGAGAGCGGT 61.284 57.895 0.00 0.00 0.00 5.68
74 75 2.507110 ATCGTGGTTGGAGAGCGGTG 62.507 60.000 0.00 0.00 0.00 4.94
75 76 2.426023 GTGGTTGGAGAGCGGTGT 59.574 61.111 0.00 0.00 0.00 4.16
76 77 1.227853 GTGGTTGGAGAGCGGTGTT 60.228 57.895 0.00 0.00 0.00 3.32
77 78 0.818040 GTGGTTGGAGAGCGGTGTTT 60.818 55.000 0.00 0.00 0.00 2.83
78 79 0.534203 TGGTTGGAGAGCGGTGTTTC 60.534 55.000 0.00 0.00 0.00 2.78
79 80 1.566018 GGTTGGAGAGCGGTGTTTCG 61.566 60.000 0.00 0.00 0.00 3.46
80 81 1.301401 TTGGAGAGCGGTGTTTCGG 60.301 57.895 0.00 0.00 0.00 4.30
81 82 3.119096 GGAGAGCGGTGTTTCGGC 61.119 66.667 0.00 0.00 41.70 5.54
82 83 3.119096 GAGAGCGGTGTTTCGGCC 61.119 66.667 0.00 0.00 42.23 6.13
83 84 4.699522 AGAGCGGTGTTTCGGCCC 62.700 66.667 0.00 0.00 42.23 5.80
92 93 4.311445 TTTCGGCCCCGCGTGTAA 62.311 61.111 4.92 0.00 39.59 2.41
93 94 4.745751 TTCGGCCCCGCGTGTAAG 62.746 66.667 4.92 0.00 39.59 2.34
96 97 3.428282 GGCCCCGCGTGTAAGTTG 61.428 66.667 4.92 0.00 0.00 3.16
97 98 3.428282 GCCCCGCGTGTAAGTTGG 61.428 66.667 4.92 0.00 0.00 3.77
98 99 2.031465 CCCCGCGTGTAAGTTGGT 59.969 61.111 4.92 0.00 0.00 3.67
99 100 2.322081 CCCCGCGTGTAAGTTGGTG 61.322 63.158 4.92 0.00 0.00 4.17
100 101 2.322081 CCCGCGTGTAAGTTGGTGG 61.322 63.158 4.92 0.00 0.00 4.61
101 102 2.322081 CCGCGTGTAAGTTGGTGGG 61.322 63.158 4.92 0.00 0.00 4.61
102 103 2.951458 GCGTGTAAGTTGGTGGGC 59.049 61.111 0.00 0.00 0.00 5.36
103 104 1.599797 GCGTGTAAGTTGGTGGGCT 60.600 57.895 0.00 0.00 0.00 5.19
104 105 1.852067 GCGTGTAAGTTGGTGGGCTG 61.852 60.000 0.00 0.00 0.00 4.85
105 106 1.852067 CGTGTAAGTTGGTGGGCTGC 61.852 60.000 0.00 0.00 0.00 5.25
106 107 0.537371 GTGTAAGTTGGTGGGCTGCT 60.537 55.000 0.00 0.00 0.00 4.24
107 108 0.184933 TGTAAGTTGGTGGGCTGCTT 59.815 50.000 0.00 0.00 0.00 3.91
108 109 0.598065 GTAAGTTGGTGGGCTGCTTG 59.402 55.000 0.00 0.00 0.00 4.01
109 110 0.539438 TAAGTTGGTGGGCTGCTTGG 60.539 55.000 0.00 0.00 0.00 3.61
110 111 2.203480 GTTGGTGGGCTGCTTGGA 60.203 61.111 0.00 0.00 0.00 3.53
111 112 2.115910 TTGGTGGGCTGCTTGGAG 59.884 61.111 0.00 0.00 0.00 3.86
112 113 2.459969 TTGGTGGGCTGCTTGGAGA 61.460 57.895 0.00 0.00 0.00 3.71
113 114 2.045536 GGTGGGCTGCTTGGAGAG 60.046 66.667 0.00 0.00 0.00 3.20
114 115 2.045536 GTGGGCTGCTTGGAGAGG 60.046 66.667 0.00 0.00 0.00 3.69
115 116 2.530151 TGGGCTGCTTGGAGAGGT 60.530 61.111 0.00 0.00 0.00 3.85
116 117 2.270527 GGGCTGCTTGGAGAGGTC 59.729 66.667 0.00 0.00 0.00 3.85
117 118 2.125350 GGCTGCTTGGAGAGGTCG 60.125 66.667 0.00 0.00 0.00 4.79
118 119 2.125350 GCTGCTTGGAGAGGTCGG 60.125 66.667 0.00 0.00 0.00 4.79
119 120 2.948720 GCTGCTTGGAGAGGTCGGT 61.949 63.158 0.00 0.00 0.00 4.69
120 121 1.079543 CTGCTTGGAGAGGTCGGTG 60.080 63.158 0.00 0.00 0.00 4.94
121 122 2.266055 GCTTGGAGAGGTCGGTGG 59.734 66.667 0.00 0.00 0.00 4.61
122 123 2.982130 CTTGGAGAGGTCGGTGGG 59.018 66.667 0.00 0.00 0.00 4.61
123 124 3.316573 CTTGGAGAGGTCGGTGGGC 62.317 68.421 0.00 0.00 0.00 5.36
124 125 3.846405 TTGGAGAGGTCGGTGGGCT 62.846 63.158 0.00 0.00 0.00 5.19
125 126 3.462678 GGAGAGGTCGGTGGGCTC 61.463 72.222 0.00 0.00 0.00 4.70
126 127 2.680352 GAGAGGTCGGTGGGCTCA 60.680 66.667 0.00 0.00 0.00 4.26
127 128 2.997897 AGAGGTCGGTGGGCTCAC 60.998 66.667 8.68 8.68 42.91 3.51
128 129 2.997897 GAGGTCGGTGGGCTCACT 60.998 66.667 18.03 0.00 43.17 3.41
129 130 2.997897 AGGTCGGTGGGCTCACTC 60.998 66.667 18.03 5.88 43.17 3.51
130 131 3.311110 GGTCGGTGGGCTCACTCA 61.311 66.667 18.03 0.00 43.17 3.41
131 132 2.048127 GTCGGTGGGCTCACTCAC 60.048 66.667 18.03 9.73 43.17 3.51
136 137 3.842869 GTGGGCTCACTCACCTAAG 57.157 57.895 10.23 0.00 40.58 2.18
137 138 1.267121 GTGGGCTCACTCACCTAAGA 58.733 55.000 10.23 0.00 40.58 2.10
138 139 1.834263 GTGGGCTCACTCACCTAAGAT 59.166 52.381 10.23 0.00 40.58 2.40
139 140 2.237392 GTGGGCTCACTCACCTAAGATT 59.763 50.000 10.23 0.00 40.58 2.40
140 141 2.237143 TGGGCTCACTCACCTAAGATTG 59.763 50.000 0.00 0.00 0.00 2.67
141 142 2.237392 GGGCTCACTCACCTAAGATTGT 59.763 50.000 0.00 0.00 0.00 2.71
142 143 3.265791 GGCTCACTCACCTAAGATTGTG 58.734 50.000 0.00 0.00 0.00 3.33
143 144 3.055819 GGCTCACTCACCTAAGATTGTGA 60.056 47.826 0.00 0.00 39.08 3.58
144 145 4.563580 GGCTCACTCACCTAAGATTGTGAA 60.564 45.833 0.00 0.00 40.71 3.18
145 146 4.390297 GCTCACTCACCTAAGATTGTGAAC 59.610 45.833 0.00 0.00 40.71 3.18
146 147 5.541845 CTCACTCACCTAAGATTGTGAACA 58.458 41.667 0.00 0.00 40.71 3.18
147 148 5.297547 TCACTCACCTAAGATTGTGAACAC 58.702 41.667 0.00 0.00 40.71 3.32
148 149 5.056480 CACTCACCTAAGATTGTGAACACA 58.944 41.667 3.39 3.39 40.71 3.72
149 150 5.702670 CACTCACCTAAGATTGTGAACACAT 59.297 40.000 8.46 0.00 40.71 3.21
150 151 5.702670 ACTCACCTAAGATTGTGAACACATG 59.297 40.000 8.46 0.00 40.71 3.21
151 152 5.003160 TCACCTAAGATTGTGAACACATGG 58.997 41.667 8.46 7.10 41.52 3.66
152 153 3.758554 ACCTAAGATTGTGAACACATGGC 59.241 43.478 8.46 2.13 41.52 4.40
153 154 3.758023 CCTAAGATTGTGAACACATGGCA 59.242 43.478 8.46 0.00 41.52 4.92
154 155 4.218200 CCTAAGATTGTGAACACATGGCAA 59.782 41.667 8.46 0.00 41.52 4.52
155 156 4.877378 AAGATTGTGAACACATGGCAAT 57.123 36.364 8.46 0.00 41.52 3.56
156 157 4.182693 AGATTGTGAACACATGGCAATG 57.817 40.909 8.46 0.00 41.52 2.82
157 158 2.151881 TTGTGAACACATGGCAATGC 57.848 45.000 8.46 0.00 41.52 3.56
158 159 1.038280 TGTGAACACATGGCAATGCA 58.962 45.000 7.79 0.00 37.29 3.96
159 160 1.411612 TGTGAACACATGGCAATGCAA 59.588 42.857 7.79 0.00 37.29 4.08
160 161 2.159000 TGTGAACACATGGCAATGCAAA 60.159 40.909 7.79 0.00 37.29 3.68
161 162 2.871022 GTGAACACATGGCAATGCAAAA 59.129 40.909 7.79 0.00 37.29 2.44
162 163 3.499157 GTGAACACATGGCAATGCAAAAT 59.501 39.130 7.79 0.00 37.29 1.82
163 164 4.689812 GTGAACACATGGCAATGCAAAATA 59.310 37.500 7.79 0.00 37.29 1.40
164 165 4.689812 TGAACACATGGCAATGCAAAATAC 59.310 37.500 7.79 0.00 37.29 1.89
165 166 4.268797 ACACATGGCAATGCAAAATACA 57.731 36.364 7.79 0.00 37.29 2.29
166 167 4.834534 ACACATGGCAATGCAAAATACAT 58.165 34.783 7.79 0.00 37.29 2.29
167 168 4.632251 ACACATGGCAATGCAAAATACATG 59.368 37.500 7.79 12.36 39.88 3.21
168 169 4.870991 CACATGGCAATGCAAAATACATGA 59.129 37.500 20.80 0.00 38.03 3.07
169 170 4.871557 ACATGGCAATGCAAAATACATGAC 59.128 37.500 20.80 4.19 38.03 3.06
170 171 3.859443 TGGCAATGCAAAATACATGACC 58.141 40.909 7.79 0.00 0.00 4.02
171 172 3.197265 GGCAATGCAAAATACATGACCC 58.803 45.455 7.79 0.00 0.00 4.46
172 173 3.197265 GCAATGCAAAATACATGACCCC 58.803 45.455 0.00 0.00 0.00 4.95
173 174 3.369261 GCAATGCAAAATACATGACCCCA 60.369 43.478 0.00 0.00 0.00 4.96
174 175 4.829968 CAATGCAAAATACATGACCCCAA 58.170 39.130 0.00 0.00 0.00 4.12
175 176 3.951775 TGCAAAATACATGACCCCAAC 57.048 42.857 0.00 0.00 0.00 3.77
176 177 2.564947 TGCAAAATACATGACCCCAACC 59.435 45.455 0.00 0.00 0.00 3.77
177 178 2.093711 GCAAAATACATGACCCCAACCC 60.094 50.000 0.00 0.00 0.00 4.11
178 179 2.499693 CAAAATACATGACCCCAACCCC 59.500 50.000 0.00 0.00 0.00 4.95
179 180 0.634465 AATACATGACCCCAACCCCC 59.366 55.000 0.00 0.00 0.00 5.40
180 181 0.553862 ATACATGACCCCAACCCCCA 60.554 55.000 0.00 0.00 0.00 4.96
181 182 1.502527 TACATGACCCCAACCCCCAC 61.503 60.000 0.00 0.00 0.00 4.61
182 183 3.272847 ATGACCCCAACCCCCACC 61.273 66.667 0.00 0.00 0.00 4.61
183 184 4.865228 TGACCCCAACCCCCACCA 62.865 66.667 0.00 0.00 0.00 4.17
184 185 3.979497 GACCCCAACCCCCACCAG 61.979 72.222 0.00 0.00 0.00 4.00
196 197 3.670105 CCACCAGGGTAGCAAATGT 57.330 52.632 0.00 0.00 0.00 2.71
197 198 1.176527 CCACCAGGGTAGCAAATGTG 58.823 55.000 0.00 0.00 0.00 3.21
198 199 1.547675 CCACCAGGGTAGCAAATGTGT 60.548 52.381 0.00 0.00 0.00 3.72
199 200 2.290641 CCACCAGGGTAGCAAATGTGTA 60.291 50.000 0.00 0.00 0.00 2.90
200 201 3.417101 CACCAGGGTAGCAAATGTGTAA 58.583 45.455 0.00 0.00 0.00 2.41
201 202 4.016444 CACCAGGGTAGCAAATGTGTAAT 58.984 43.478 0.00 0.00 0.00 1.89
202 203 5.189928 CACCAGGGTAGCAAATGTGTAATA 58.810 41.667 0.00 0.00 0.00 0.98
203 204 5.650266 CACCAGGGTAGCAAATGTGTAATAA 59.350 40.000 0.00 0.00 0.00 1.40
204 205 5.650703 ACCAGGGTAGCAAATGTGTAATAAC 59.349 40.000 0.00 0.00 0.00 1.89
205 206 5.650266 CCAGGGTAGCAAATGTGTAATAACA 59.350 40.000 0.00 0.00 0.00 2.41
206 207 6.183360 CCAGGGTAGCAAATGTGTAATAACAG 60.183 42.308 0.00 0.00 35.91 3.16
207 208 5.357032 AGGGTAGCAAATGTGTAATAACAGC 59.643 40.000 0.00 0.00 35.91 4.40
208 209 5.263185 GGTAGCAAATGTGTAATAACAGCG 58.737 41.667 0.00 0.00 35.91 5.18
209 210 5.163794 GGTAGCAAATGTGTAATAACAGCGT 60.164 40.000 0.00 0.00 35.91 5.07
210 211 6.036300 GGTAGCAAATGTGTAATAACAGCGTA 59.964 38.462 0.00 0.00 35.91 4.42
211 212 6.106877 AGCAAATGTGTAATAACAGCGTAG 57.893 37.500 0.00 0.00 35.91 3.51
212 213 5.642063 AGCAAATGTGTAATAACAGCGTAGT 59.358 36.000 0.00 0.00 35.91 2.73
213 214 6.148811 AGCAAATGTGTAATAACAGCGTAGTT 59.851 34.615 0.00 0.61 35.91 2.24
214 215 7.332430 AGCAAATGTGTAATAACAGCGTAGTTA 59.668 33.333 4.69 4.69 35.91 2.24
215 216 7.424452 GCAAATGTGTAATAACAGCGTAGTTAC 59.576 37.037 4.37 5.78 36.85 2.50
216 217 8.436970 CAAATGTGTAATAACAGCGTAGTTACA 58.563 33.333 4.37 11.18 36.85 2.41
219 220 6.932901 TGTAATAACAGCGTAGTTACACAC 57.067 37.500 4.37 4.33 36.85 3.82
220 221 6.680810 TGTAATAACAGCGTAGTTACACACT 58.319 36.000 4.37 0.00 36.85 3.55
221 222 7.815641 TGTAATAACAGCGTAGTTACACACTA 58.184 34.615 4.37 0.00 36.85 2.74
222 223 8.296000 TGTAATAACAGCGTAGTTACACACTAA 58.704 33.333 4.37 0.00 39.86 2.24
223 224 9.128107 GTAATAACAGCGTAGTTACACACTAAA 57.872 33.333 4.37 0.00 39.86 1.85
224 225 5.895216 AACAGCGTAGTTACACACTAAAC 57.105 39.130 0.00 0.00 39.86 2.01
225 226 4.935702 ACAGCGTAGTTACACACTAAACA 58.064 39.130 0.00 0.00 39.86 2.83
226 227 5.350633 ACAGCGTAGTTACACACTAAACAA 58.649 37.500 0.00 0.00 39.86 2.83
227 228 5.232838 ACAGCGTAGTTACACACTAAACAAC 59.767 40.000 0.00 0.00 39.86 3.32
228 229 5.232626 CAGCGTAGTTACACACTAAACAACA 59.767 40.000 0.00 0.00 39.86 3.33
229 230 5.987347 AGCGTAGTTACACACTAAACAACAT 59.013 36.000 0.00 0.00 39.86 2.71
230 231 6.145048 AGCGTAGTTACACACTAAACAACATC 59.855 38.462 0.00 0.00 39.86 3.06
231 232 6.145048 GCGTAGTTACACACTAAACAACATCT 59.855 38.462 0.00 0.00 39.86 2.90
232 233 7.306983 GCGTAGTTACACACTAAACAACATCTT 60.307 37.037 0.00 0.00 39.86 2.40
233 234 8.212495 CGTAGTTACACACTAAACAACATCTTC 58.788 37.037 0.00 0.00 39.86 2.87
234 235 7.492352 AGTTACACACTAAACAACATCTTCC 57.508 36.000 0.00 0.00 31.97 3.46
235 236 6.485648 AGTTACACACTAAACAACATCTTCCC 59.514 38.462 0.00 0.00 31.97 3.97
236 237 4.142038 ACACACTAAACAACATCTTCCCC 58.858 43.478 0.00 0.00 0.00 4.81
237 238 4.141251 ACACACTAAACAACATCTTCCCCT 60.141 41.667 0.00 0.00 0.00 4.79
238 239 4.827284 CACACTAAACAACATCTTCCCCTT 59.173 41.667 0.00 0.00 0.00 3.95
239 240 5.048713 CACACTAAACAACATCTTCCCCTTC 60.049 44.000 0.00 0.00 0.00 3.46
240 241 5.070001 CACTAAACAACATCTTCCCCTTCA 58.930 41.667 0.00 0.00 0.00 3.02
241 242 5.711976 CACTAAACAACATCTTCCCCTTCAT 59.288 40.000 0.00 0.00 0.00 2.57
242 243 5.711976 ACTAAACAACATCTTCCCCTTCATG 59.288 40.000 0.00 0.00 0.00 3.07
243 244 3.814504 ACAACATCTTCCCCTTCATGT 57.185 42.857 0.00 0.00 0.00 3.21
244 245 3.690460 ACAACATCTTCCCCTTCATGTC 58.310 45.455 0.00 0.00 0.00 3.06
245 246 3.331889 ACAACATCTTCCCCTTCATGTCT 59.668 43.478 0.00 0.00 0.00 3.41
246 247 4.202609 ACAACATCTTCCCCTTCATGTCTT 60.203 41.667 0.00 0.00 0.00 3.01
247 248 4.664688 ACATCTTCCCCTTCATGTCTTT 57.335 40.909 0.00 0.00 0.00 2.52
248 249 4.593956 ACATCTTCCCCTTCATGTCTTTC 58.406 43.478 0.00 0.00 0.00 2.62
249 250 4.290722 ACATCTTCCCCTTCATGTCTTTCT 59.709 41.667 0.00 0.00 0.00 2.52
250 251 5.488919 ACATCTTCCCCTTCATGTCTTTCTA 59.511 40.000 0.00 0.00 0.00 2.10
251 252 6.159398 ACATCTTCCCCTTCATGTCTTTCTAT 59.841 38.462 0.00 0.00 0.00 1.98
252 253 6.240549 TCTTCCCCTTCATGTCTTTCTATC 57.759 41.667 0.00 0.00 0.00 2.08
253 254 5.966935 TCTTCCCCTTCATGTCTTTCTATCT 59.033 40.000 0.00 0.00 0.00 1.98
254 255 6.445139 TCTTCCCCTTCATGTCTTTCTATCTT 59.555 38.462 0.00 0.00 0.00 2.40
255 256 6.642733 TCCCCTTCATGTCTTTCTATCTTT 57.357 37.500 0.00 0.00 0.00 2.52
256 257 6.653989 TCCCCTTCATGTCTTTCTATCTTTC 58.346 40.000 0.00 0.00 0.00 2.62
257 258 6.445139 TCCCCTTCATGTCTTTCTATCTTTCT 59.555 38.462 0.00 0.00 0.00 2.52
258 259 7.623677 TCCCCTTCATGTCTTTCTATCTTTCTA 59.376 37.037 0.00 0.00 0.00 2.10
259 260 8.267894 CCCCTTCATGTCTTTCTATCTTTCTAA 58.732 37.037 0.00 0.00 0.00 2.10
260 261 9.323985 CCCTTCATGTCTTTCTATCTTTCTAAG 57.676 37.037 0.00 0.00 0.00 2.18
284 285 8.727100 AGATTTCCTCTCATATGTACATACCA 57.273 34.615 17.69 6.57 0.00 3.25
285 286 9.331466 AGATTTCCTCTCATATGTACATACCAT 57.669 33.333 17.69 0.56 0.00 3.55
286 287 9.376075 GATTTCCTCTCATATGTACATACCATG 57.624 37.037 17.69 13.28 0.00 3.66
287 288 6.286240 TCCTCTCATATGTACATACCATGC 57.714 41.667 17.69 0.00 0.00 4.06
288 289 6.019108 TCCTCTCATATGTACATACCATGCT 58.981 40.000 17.69 0.00 0.00 3.79
289 290 6.153510 TCCTCTCATATGTACATACCATGCTC 59.846 42.308 17.69 0.00 0.00 4.26
290 291 5.954335 TCTCATATGTACATACCATGCTCG 58.046 41.667 17.69 6.24 0.00 5.03
291 292 4.494484 TCATATGTACATACCATGCTCGC 58.506 43.478 17.69 0.00 0.00 5.03
292 293 2.908688 ATGTACATACCATGCTCGCA 57.091 45.000 6.56 0.00 0.00 5.10
293 294 2.682155 TGTACATACCATGCTCGCAA 57.318 45.000 0.00 0.00 0.00 4.85
294 295 2.276201 TGTACATACCATGCTCGCAAC 58.724 47.619 0.00 0.00 0.00 4.17
295 296 1.257936 GTACATACCATGCTCGCAACG 59.742 52.381 0.00 0.00 0.00 4.10
296 297 0.391130 ACATACCATGCTCGCAACGT 60.391 50.000 0.00 0.00 0.00 3.99
297 298 0.726827 CATACCATGCTCGCAACGTT 59.273 50.000 0.00 0.00 0.00 3.99
298 299 1.006832 ATACCATGCTCGCAACGTTC 58.993 50.000 0.00 0.00 0.00 3.95
299 300 0.319986 TACCATGCTCGCAACGTTCA 60.320 50.000 0.00 0.00 0.00 3.18
300 301 1.163420 ACCATGCTCGCAACGTTCAA 61.163 50.000 0.00 0.00 0.00 2.69
301 302 0.725784 CCATGCTCGCAACGTTCAAC 60.726 55.000 0.00 0.00 0.00 3.18
303 304 1.218875 ATGCTCGCAACGTTCAACGA 61.219 50.000 18.84 14.57 46.05 3.85
304 305 1.274476 GCTCGCAACGTTCAACGAA 59.726 52.632 18.84 0.00 46.05 3.85
305 306 0.985416 GCTCGCAACGTTCAACGAAC 60.985 55.000 18.84 4.14 46.05 3.95
313 314 3.432759 GTTCAACGAACGCAACCTC 57.567 52.632 0.00 0.00 32.81 3.85
314 315 0.653636 GTTCAACGAACGCAACCTCA 59.346 50.000 0.00 0.00 32.81 3.86
315 316 1.062880 GTTCAACGAACGCAACCTCAA 59.937 47.619 0.00 0.00 32.81 3.02
316 317 0.653636 TCAACGAACGCAACCTCAAC 59.346 50.000 0.00 0.00 0.00 3.18
317 318 0.653323 CAACGAACGCAACCTCAACG 60.653 55.000 0.00 0.00 0.00 4.10
318 319 0.806884 AACGAACGCAACCTCAACGA 60.807 50.000 0.00 0.00 0.00 3.85
319 320 1.200839 CGAACGCAACCTCAACGAC 59.799 57.895 0.00 0.00 0.00 4.34
320 321 1.213094 CGAACGCAACCTCAACGACT 61.213 55.000 0.00 0.00 0.00 4.18
321 322 0.232303 GAACGCAACCTCAACGACTG 59.768 55.000 0.00 0.00 0.00 3.51
322 323 0.179094 AACGCAACCTCAACGACTGA 60.179 50.000 0.00 0.00 0.00 3.41
323 324 0.179094 ACGCAACCTCAACGACTGAA 60.179 50.000 0.00 0.00 32.17 3.02
324 325 0.508641 CGCAACCTCAACGACTGAAG 59.491 55.000 0.00 0.00 32.17 3.02
325 326 1.865865 GCAACCTCAACGACTGAAGA 58.134 50.000 0.00 0.00 32.17 2.87
326 327 2.210116 GCAACCTCAACGACTGAAGAA 58.790 47.619 0.00 0.00 32.17 2.52
327 328 2.808543 GCAACCTCAACGACTGAAGAAT 59.191 45.455 0.00 0.00 32.17 2.40
328 329 3.364366 GCAACCTCAACGACTGAAGAATG 60.364 47.826 0.00 0.00 32.17 2.67
329 330 3.045601 ACCTCAACGACTGAAGAATGG 57.954 47.619 0.00 0.00 32.17 3.16
330 331 2.368875 ACCTCAACGACTGAAGAATGGT 59.631 45.455 0.00 0.00 32.17 3.55
331 332 2.738846 CCTCAACGACTGAAGAATGGTG 59.261 50.000 0.00 0.00 32.17 4.17
332 333 2.143122 TCAACGACTGAAGAATGGTGC 58.857 47.619 0.00 0.00 0.00 5.01
333 334 1.872952 CAACGACTGAAGAATGGTGCA 59.127 47.619 0.00 0.00 0.00 4.57
334 335 2.254546 ACGACTGAAGAATGGTGCAA 57.745 45.000 0.00 0.00 0.00 4.08
335 336 2.783135 ACGACTGAAGAATGGTGCAAT 58.217 42.857 0.00 0.00 0.00 3.56
336 337 2.485426 ACGACTGAAGAATGGTGCAATG 59.515 45.455 0.00 0.00 0.00 2.82
337 338 2.743664 CGACTGAAGAATGGTGCAATGA 59.256 45.455 0.00 0.00 0.00 2.57
338 339 3.189080 CGACTGAAGAATGGTGCAATGAA 59.811 43.478 0.00 0.00 0.00 2.57
339 340 4.670992 CGACTGAAGAATGGTGCAATGAAG 60.671 45.833 0.00 0.00 0.00 3.02
340 341 4.147321 ACTGAAGAATGGTGCAATGAAGT 58.853 39.130 0.00 0.00 0.00 3.01
341 342 4.022589 ACTGAAGAATGGTGCAATGAAGTG 60.023 41.667 0.00 0.00 0.00 3.16
342 343 3.890756 TGAAGAATGGTGCAATGAAGTGT 59.109 39.130 0.00 0.00 0.00 3.55
343 344 3.928727 AGAATGGTGCAATGAAGTGTG 57.071 42.857 0.00 0.00 0.00 3.82
344 345 2.029649 AGAATGGTGCAATGAAGTGTGC 60.030 45.455 0.00 0.00 41.29 4.57
345 346 0.241749 ATGGTGCAATGAAGTGTGCG 59.758 50.000 0.00 0.00 43.93 5.34
346 347 3.832981 GTGCAATGAAGTGTGCGC 58.167 55.556 0.00 0.00 43.93 6.09
347 348 1.283793 GTGCAATGAAGTGTGCGCT 59.716 52.632 9.73 0.00 45.59 5.92
348 349 0.516877 GTGCAATGAAGTGTGCGCTA 59.483 50.000 9.73 0.00 45.59 4.26
349 350 0.798159 TGCAATGAAGTGTGCGCTAG 59.202 50.000 9.73 0.00 43.93 3.42
350 351 0.798776 GCAATGAAGTGTGCGCTAGT 59.201 50.000 9.73 0.00 0.00 2.57
351 352 1.197721 GCAATGAAGTGTGCGCTAGTT 59.802 47.619 9.73 7.00 0.00 2.24
352 353 2.350772 GCAATGAAGTGTGCGCTAGTTT 60.351 45.455 9.73 0.00 0.00 2.66
353 354 3.228749 CAATGAAGTGTGCGCTAGTTTG 58.771 45.455 9.73 0.00 0.00 2.93
354 355 1.948104 TGAAGTGTGCGCTAGTTTGT 58.052 45.000 9.73 0.00 0.00 2.83
355 356 3.100658 TGAAGTGTGCGCTAGTTTGTA 57.899 42.857 9.73 0.00 0.00 2.41
356 357 3.459145 TGAAGTGTGCGCTAGTTTGTAA 58.541 40.909 9.73 0.00 0.00 2.41
357 358 3.493129 TGAAGTGTGCGCTAGTTTGTAAG 59.507 43.478 9.73 0.00 0.00 2.34
358 359 3.107642 AGTGTGCGCTAGTTTGTAAGT 57.892 42.857 9.73 0.00 0.00 2.24
359 360 2.800544 AGTGTGCGCTAGTTTGTAAGTG 59.199 45.455 9.73 0.00 0.00 3.16
360 361 2.542595 GTGTGCGCTAGTTTGTAAGTGT 59.457 45.455 9.73 0.00 0.00 3.55
361 362 3.001939 GTGTGCGCTAGTTTGTAAGTGTT 59.998 43.478 9.73 0.00 0.00 3.32
362 363 3.623960 TGTGCGCTAGTTTGTAAGTGTTT 59.376 39.130 9.73 0.00 0.00 2.83
363 364 4.209112 GTGCGCTAGTTTGTAAGTGTTTC 58.791 43.478 9.73 0.00 0.00 2.78
364 365 4.025145 GTGCGCTAGTTTGTAAGTGTTTCT 60.025 41.667 9.73 0.00 0.00 2.52
365 366 4.573201 TGCGCTAGTTTGTAAGTGTTTCTT 59.427 37.500 9.73 0.00 39.89 2.52
366 367 5.065474 TGCGCTAGTTTGTAAGTGTTTCTTT 59.935 36.000 9.73 0.00 37.56 2.52
367 368 5.395486 GCGCTAGTTTGTAAGTGTTTCTTTG 59.605 40.000 0.00 0.00 37.56 2.77
368 369 6.711579 CGCTAGTTTGTAAGTGTTTCTTTGA 58.288 36.000 0.00 0.00 37.56 2.69
369 370 7.184106 CGCTAGTTTGTAAGTGTTTCTTTGAA 58.816 34.615 0.00 0.00 37.56 2.69
370 371 7.694784 CGCTAGTTTGTAAGTGTTTCTTTGAAA 59.305 33.333 0.00 0.00 37.56 2.69
371 372 8.795341 GCTAGTTTGTAAGTGTTTCTTTGAAAC 58.205 33.333 14.14 14.14 36.88 2.78
372 373 7.790861 AGTTTGTAAGTGTTTCTTTGAAACG 57.209 32.000 15.46 0.00 38.99 3.60
373 374 7.586747 AGTTTGTAAGTGTTTCTTTGAAACGA 58.413 30.769 15.46 5.42 38.99 3.85
374 375 8.241367 AGTTTGTAAGTGTTTCTTTGAAACGAT 58.759 29.630 15.46 8.64 38.99 3.73
375 376 8.856247 GTTTGTAAGTGTTTCTTTGAAACGATT 58.144 29.630 15.46 14.25 37.56 3.34
376 377 8.973835 TTGTAAGTGTTTCTTTGAAACGATTT 57.026 26.923 15.46 12.20 37.56 2.17
377 378 8.973835 TGTAAGTGTTTCTTTGAAACGATTTT 57.026 26.923 15.46 10.45 37.56 1.82
378 379 8.855279 TGTAAGTGTTTCTTTGAAACGATTTTG 58.145 29.630 15.46 0.00 37.56 2.44
379 380 7.883229 AAGTGTTTCTTTGAAACGATTTTGT 57.117 28.000 15.46 0.00 31.57 2.83
380 381 7.883229 AGTGTTTCTTTGAAACGATTTTGTT 57.117 28.000 15.46 0.00 33.05 2.83
381 382 8.305441 AGTGTTTCTTTGAAACGATTTTGTTT 57.695 26.923 15.46 0.00 44.36 2.83
382 383 8.769891 AGTGTTTCTTTGAAACGATTTTGTTTT 58.230 25.926 15.46 0.00 41.89 2.43
383 384 9.376171 GTGTTTCTTTGAAACGATTTTGTTTTT 57.624 25.926 15.46 0.00 41.89 1.94
384 385 9.587461 TGTTTCTTTGAAACGATTTTGTTTTTC 57.413 25.926 15.46 0.00 41.89 2.29
385 386 9.587461 GTTTCTTTGAAACGATTTTGTTTTTCA 57.413 25.926 7.31 0.00 41.89 2.69
427 428 6.358178 TGTAAGTGTTTCTCAAACCATGGTA 58.642 36.000 20.12 0.84 40.67 3.25
430 431 6.144078 AGTGTTTCTCAAACCATGGTAAAC 57.856 37.500 24.22 24.22 40.67 2.01
434 435 3.482436 TCTCAAACCATGGTAAACGCTT 58.518 40.909 20.12 4.37 0.00 4.68
436 437 2.224549 TCAAACCATGGTAAACGCTTCG 59.775 45.455 20.12 3.23 0.00 3.79
437 438 1.161843 AACCATGGTAAACGCTTCGG 58.838 50.000 20.12 0.00 0.00 4.30
443 444 1.344114 TGGTAAACGCTTCGGTAACCT 59.656 47.619 0.00 0.00 30.88 3.50
463 464 0.393820 GGGTCAGGTGTGAACGGTTA 59.606 55.000 0.00 0.00 41.90 2.85
500 501 2.233566 ATGTGAGGCCCCAAGAGCA 61.234 57.895 0.00 0.00 0.00 4.26
578 579 1.229082 AGCCCGAGTCCAGTGGTTA 60.229 57.895 9.54 0.00 0.00 2.85
623 816 7.235399 TCTGCATATCATGTACTCCTTTCCATA 59.765 37.037 0.00 0.00 0.00 2.74
661 854 4.627058 TGAGCGACAACTAATTTCAGACA 58.373 39.130 0.00 0.00 0.00 3.41
668 861 6.510478 CGACAACTAATTTCAGACAAACGGAA 60.510 38.462 0.00 0.00 0.00 4.30
681 874 7.759886 TCAGACAAACGGAATATCTACTTTCTG 59.240 37.037 0.00 0.00 34.94 3.02
985 1191 2.223971 ACGTCGATCTCTCTCTCTCTCC 60.224 54.545 0.00 0.00 0.00 3.71
1184 1393 2.186903 CAAGGCTCCGGTGCGTAT 59.813 61.111 22.49 8.71 0.00 3.06
1185 1394 1.440060 CAAGGCTCCGGTGCGTATA 59.560 57.895 22.49 0.00 0.00 1.47
1186 1395 0.033504 CAAGGCTCCGGTGCGTATAT 59.966 55.000 22.49 6.12 0.00 0.86
1187 1396 1.271379 CAAGGCTCCGGTGCGTATATA 59.729 52.381 22.49 0.00 0.00 0.86
1191 1400 1.533338 GCTCCGGTGCGTATATATCCG 60.533 57.143 13.48 3.41 40.72 4.18
1221 1430 9.697250 TTTATATAAAACTTTTGCAGATCGACG 57.303 29.630 5.41 0.00 0.00 5.12
1223 1432 0.163788 AACTTTTGCAGATCGACGCG 59.836 50.000 3.53 3.53 0.00 6.01
1225 1434 3.347588 TTTTGCAGATCGACGCGCG 62.348 57.895 30.96 30.96 42.69 6.86
1256 1522 1.841302 ATTTCTGGCTCCCTGACGCA 61.841 55.000 0.00 0.00 31.34 5.24
1259 1525 1.817099 CTGGCTCCCTGACGCAATC 60.817 63.158 0.00 0.00 0.00 2.67
1263 1529 1.218230 GCTCCCTGACGCAATCGATC 61.218 60.000 0.00 0.00 39.41 3.69
1371 1653 1.007336 CGCCACTGTACGTGTTCTCC 61.007 60.000 13.98 1.19 42.20 3.71
1379 1661 1.068055 GTACGTGTTCTCCACCGTGAT 60.068 52.381 0.00 0.00 41.26 3.06
1471 1753 1.623811 GCCTCCTCAAGTACACCTTCA 59.376 52.381 0.00 0.00 0.00 3.02
1504 1786 2.100197 CAGACGACCATGGAGAAGGTA 58.900 52.381 21.47 0.00 38.50 3.08
1505 1787 2.496070 CAGACGACCATGGAGAAGGTAA 59.504 50.000 21.47 0.00 38.50 2.85
1506 1788 2.496470 AGACGACCATGGAGAAGGTAAC 59.504 50.000 21.47 0.00 38.50 2.50
1911 2193 1.681793 ACGGATACTGCTGCGTCTATT 59.318 47.619 0.00 0.00 39.01 1.73
1914 2196 3.060602 GGATACTGCTGCGTCTATTTCC 58.939 50.000 0.00 0.00 0.00 3.13
1916 2198 2.770164 ACTGCTGCGTCTATTTCCTT 57.230 45.000 0.00 0.00 0.00 3.36
1929 2211 6.702282 CGTCTATTTCCTTTGTCCTCTAATCC 59.298 42.308 0.00 0.00 0.00 3.01
2014 2379 3.983044 AAGTACAGATCCGCCTTTTCT 57.017 42.857 0.00 0.00 0.00 2.52
2086 2456 3.301116 GCTCTCGAGATACGTTGTTGAAC 59.699 47.826 17.03 0.00 43.13 3.18
2144 2515 0.961358 TACCCCGGTTCCATTTTGCG 60.961 55.000 0.00 0.00 0.00 4.85
2241 2612 8.610248 TTTGATGCAATTTGAATGTTCTGATT 57.390 26.923 0.00 0.00 0.00 2.57
2370 2745 3.872771 GTGTACCGAACCAAAACTCAAGA 59.127 43.478 0.00 0.00 0.00 3.02
2407 2782 8.608185 AGAAAATATTTCCACCACCATACAAT 57.392 30.769 0.10 0.00 0.00 2.71
2411 2788 5.920193 ATTTCCACCACCATACAATTCTG 57.080 39.130 0.00 0.00 0.00 3.02
2412 2789 2.722094 TCCACCACCATACAATTCTGC 58.278 47.619 0.00 0.00 0.00 4.26
2448 2826 4.331968 TCACAAGCACAAATACCCTAAGG 58.668 43.478 0.00 0.00 40.04 2.69
2464 2968 5.221783 ACCCTAAGGACGTACTTGATTGTTT 60.222 40.000 23.59 0.00 36.73 2.83
2493 2997 6.343716 TGATATTCTTCTGCTTGCCAAAAA 57.656 33.333 0.00 0.00 0.00 1.94
2517 3023 6.594788 AATCTTGTGGACTTGTTGCAATAT 57.405 33.333 0.59 0.00 0.00 1.28
2670 3178 7.715657 ACATTAATCTCAAGTTTCACAGCAAA 58.284 30.769 0.00 0.00 0.00 3.68
2902 3410 4.659111 TGTCCTGACGTTTCTGTTTCTA 57.341 40.909 0.00 0.00 0.00 2.10
2955 3466 7.457380 AGGAATCCAATCAAGATCTCCTAAA 57.543 36.000 0.61 0.00 33.38 1.85
2984 3495 3.146104 AGGTAACAGCTGCTCATTTGT 57.854 42.857 15.27 0.00 41.41 2.83
2992 3503 5.659463 ACAGCTGCTCATTTGTTTGTTTTA 58.341 33.333 15.27 0.00 0.00 1.52
2993 3504 6.282930 ACAGCTGCTCATTTGTTTGTTTTAT 58.717 32.000 15.27 0.00 0.00 1.40
2994 3505 6.762661 ACAGCTGCTCATTTGTTTGTTTTATT 59.237 30.769 15.27 0.00 0.00 1.40
2995 3506 7.280652 ACAGCTGCTCATTTGTTTGTTTTATTT 59.719 29.630 15.27 0.00 0.00 1.40
2996 3507 8.763356 CAGCTGCTCATTTGTTTGTTTTATTTA 58.237 29.630 0.00 0.00 0.00 1.40
3008 3519 5.464965 TGTTTTATTTAGCTAGCGCAGTC 57.535 39.130 11.47 0.00 39.10 3.51
3022 3533 2.612221 GCGCAGTCCTACTTTACAAGGT 60.612 50.000 0.30 0.00 34.30 3.50
3031 3542 8.148999 AGTCCTACTTTACAAGGTCAGTAAAAG 58.851 37.037 0.00 0.00 39.96 2.27
3088 3602 8.126871 TGTTGTCATTCTAAGCGTGATTATAC 57.873 34.615 0.00 0.00 0.00 1.47
3136 3650 0.823356 TGGGACAAGCAAAGTCAGCC 60.823 55.000 5.72 0.00 37.74 4.85
3290 3805 1.625511 AAAGAAAAGCCTGGGAGCAG 58.374 50.000 0.00 0.00 34.23 4.24
3342 3857 7.094933 CGGGTTAGCACTTTACTTCTTATGTTT 60.095 37.037 0.00 0.00 0.00 2.83
3414 3929 7.349598 ACTTGATCTCCTTATGGCTAAATGTT 58.650 34.615 0.00 0.00 0.00 2.71
3491 4006 9.613428 AATAAGTCATCGATTCAGGTAAATGAA 57.387 29.630 0.00 0.00 43.04 2.57
3539 4055 8.910351 ATTCAAGTGCTAACTATATTCCTTCC 57.090 34.615 0.00 0.00 34.77 3.46
3540 4056 7.676683 TCAAGTGCTAACTATATTCCTTCCT 57.323 36.000 0.00 0.00 34.77 3.36
3541 4057 8.090788 TCAAGTGCTAACTATATTCCTTCCTT 57.909 34.615 0.00 0.00 34.77 3.36
3542 4058 8.548877 TCAAGTGCTAACTATATTCCTTCCTTT 58.451 33.333 0.00 0.00 34.77 3.11
3543 4059 8.831550 CAAGTGCTAACTATATTCCTTCCTTTC 58.168 37.037 0.00 0.00 34.77 2.62
3544 4060 7.510407 AGTGCTAACTATATTCCTTCCTTTCC 58.490 38.462 0.00 0.00 33.79 3.13
3545 4061 6.711194 GTGCTAACTATATTCCTTCCTTTCCC 59.289 42.308 0.00 0.00 0.00 3.97
3546 4062 6.183361 TGCTAACTATATTCCTTCCTTTCCCC 60.183 42.308 0.00 0.00 0.00 4.81
3547 4063 5.664815 AACTATATTCCTTCCTTTCCCCC 57.335 43.478 0.00 0.00 0.00 5.40
3548 4064 4.921661 ACTATATTCCTTCCTTTCCCCCT 58.078 43.478 0.00 0.00 0.00 4.79
3549 4065 4.665483 ACTATATTCCTTCCTTTCCCCCTG 59.335 45.833 0.00 0.00 0.00 4.45
3550 4066 0.336392 ATTCCTTCCTTTCCCCCTGC 59.664 55.000 0.00 0.00 0.00 4.85
3551 4067 1.071314 TTCCTTCCTTTCCCCCTGCA 61.071 55.000 0.00 0.00 0.00 4.41
3552 4068 1.000396 CCTTCCTTTCCCCCTGCAG 60.000 63.158 6.78 6.78 0.00 4.41
3553 4069 1.500783 CCTTCCTTTCCCCCTGCAGA 61.501 60.000 17.39 0.00 0.00 4.26
3554 4070 0.627986 CTTCCTTTCCCCCTGCAGAT 59.372 55.000 17.39 0.00 0.00 2.90
3594 4400 5.240183 AGTTTATCCATCAATGATCCTTGCG 59.760 40.000 5.90 0.58 0.00 4.85
3642 4448 3.261897 TCAAGAACCCTTCTAAGCTCAGG 59.738 47.826 0.00 0.00 39.61 3.86
3663 4469 1.198637 ACGACGTTCTACAGTAGCACC 59.801 52.381 2.26 0.00 0.00 5.01
3789 4595 5.860941 TTGCATTAGGTTGTTTTCCAAGA 57.139 34.783 0.00 0.00 32.51 3.02
3871 4680 2.283298 ACTTGATGATCACGTGCATCC 58.717 47.619 24.39 12.79 40.05 3.51
3961 4770 5.580691 TGCTCGTGTTATTCCTAATTGTCAG 59.419 40.000 0.00 0.00 0.00 3.51
4130 4943 6.542370 GGTTGGTACTTGCACAATATGATAGT 59.458 38.462 0.00 0.00 0.00 2.12
4330 5143 2.949714 GACAGTTGTCATGGTTGTCG 57.050 50.000 7.37 0.00 44.18 4.35
4398 5211 8.137745 TCTTCTTTTGCATTGAAGGGATTTAT 57.862 30.769 17.76 0.00 38.10 1.40
4527 5340 6.493802 AGAAGAATGAATATGATGCAGCCAAT 59.506 34.615 0.00 0.00 0.00 3.16
4830 5643 7.496747 TGGATGATGATGACTTCGTTGTATTA 58.503 34.615 0.00 0.00 0.00 0.98
5031 5844 4.593206 AGGTCCAACATGTCTAGTCTGAAA 59.407 41.667 0.00 0.00 0.00 2.69
5049 5862 3.258123 TGAAAATAGCTCCTGGCAAAACC 59.742 43.478 0.00 0.00 44.79 3.27
5125 5938 2.860009 CATGGGATCCTGATGTCTTGG 58.140 52.381 12.58 0.00 0.00 3.61
5191 6004 9.181805 GAAAGCTATCTTGGTCAAACTTTAAAC 57.818 33.333 0.00 0.00 31.78 2.01
5212 6025 3.243267 ACCGCACCAAAGTTTTGTATGTC 60.243 43.478 4.12 0.00 36.45 3.06
5231 6044 9.764363 TGTATGTCTCACATTTATTCATAGACC 57.236 33.333 0.00 0.00 39.88 3.85
5480 6320 5.593909 TCCAATGAATGCCTGTATTTGGTAG 59.406 40.000 0.00 0.00 0.00 3.18
5630 6474 8.584157 TGTTTGGTTGCAAATAATATTCTCACT 58.416 29.630 0.00 0.00 0.00 3.41
5719 6563 3.197265 TGCGACACTATTCATGTGGATG 58.803 45.455 0.00 0.00 39.52 3.51
5799 6643 5.370875 AGAGGCAATCTTCAGAAGCTTAT 57.629 39.130 5.15 0.00 32.99 1.73
5830 6674 5.317733 ACAAAACGATTGTGTTTCTGGAA 57.682 34.783 9.86 0.00 41.01 3.53
5831 6675 5.901552 ACAAAACGATTGTGTTTCTGGAAT 58.098 33.333 9.86 0.00 41.01 3.01
5832 6676 5.977129 ACAAAACGATTGTGTTTCTGGAATC 59.023 36.000 9.86 0.00 41.01 2.52
5833 6677 6.183360 ACAAAACGATTGTGTTTCTGGAATCT 60.183 34.615 9.86 0.00 41.01 2.40
5834 6678 5.362556 AACGATTGTGTTTCTGGAATCTG 57.637 39.130 0.00 0.00 0.00 2.90
5835 6679 3.753272 ACGATTGTGTTTCTGGAATCTGG 59.247 43.478 0.00 0.00 0.00 3.86
5836 6680 4.002982 CGATTGTGTTTCTGGAATCTGGA 58.997 43.478 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.884465 GGAAGCTTAGCAATTGTAGTTATATTG 57.116 33.333 7.07 0.00 33.49 1.90
7 8 9.853177 AGGAAGCTTAGCAATTGTAGTTATATT 57.147 29.630 7.07 0.00 0.00 1.28
8 9 9.277783 CAGGAAGCTTAGCAATTGTAGTTATAT 57.722 33.333 7.07 0.00 0.00 0.86
9 10 7.715249 CCAGGAAGCTTAGCAATTGTAGTTATA 59.285 37.037 7.07 0.00 0.00 0.98
10 11 6.543831 CCAGGAAGCTTAGCAATTGTAGTTAT 59.456 38.462 7.07 0.00 0.00 1.89
11 12 5.880332 CCAGGAAGCTTAGCAATTGTAGTTA 59.120 40.000 7.07 0.00 0.00 2.24
12 13 4.702131 CCAGGAAGCTTAGCAATTGTAGTT 59.298 41.667 7.07 0.00 0.00 2.24
13 14 4.263506 ACCAGGAAGCTTAGCAATTGTAGT 60.264 41.667 7.07 0.00 0.00 2.73
14 15 4.265073 ACCAGGAAGCTTAGCAATTGTAG 58.735 43.478 7.07 3.90 0.00 2.74
15 16 4.301072 ACCAGGAAGCTTAGCAATTGTA 57.699 40.909 7.07 0.00 0.00 2.41
16 17 3.160679 ACCAGGAAGCTTAGCAATTGT 57.839 42.857 7.07 0.00 0.00 2.71
17 18 5.126061 ACATTACCAGGAAGCTTAGCAATTG 59.874 40.000 7.07 0.00 0.00 2.32
18 19 5.264395 ACATTACCAGGAAGCTTAGCAATT 58.736 37.500 7.07 0.00 0.00 2.32
19 20 4.860022 ACATTACCAGGAAGCTTAGCAAT 58.140 39.130 7.07 0.00 0.00 3.56
20 21 4.301072 ACATTACCAGGAAGCTTAGCAA 57.699 40.909 7.07 0.00 0.00 3.91
21 22 4.683400 GCTACATTACCAGGAAGCTTAGCA 60.683 45.833 7.07 0.00 31.67 3.49
22 23 3.810386 GCTACATTACCAGGAAGCTTAGC 59.190 47.826 0.00 0.00 0.00 3.09
23 24 4.101741 AGGCTACATTACCAGGAAGCTTAG 59.898 45.833 0.00 0.00 0.00 2.18
24 25 4.037927 AGGCTACATTACCAGGAAGCTTA 58.962 43.478 0.00 0.00 0.00 3.09
25 26 2.846827 AGGCTACATTACCAGGAAGCTT 59.153 45.455 0.00 0.00 0.00 3.74
26 27 2.436173 GAGGCTACATTACCAGGAAGCT 59.564 50.000 0.00 0.00 0.00 3.74
27 28 2.170607 TGAGGCTACATTACCAGGAAGC 59.829 50.000 0.00 0.00 0.00 3.86
28 29 4.384056 CATGAGGCTACATTACCAGGAAG 58.616 47.826 0.00 0.00 0.00 3.46
29 30 3.136443 CCATGAGGCTACATTACCAGGAA 59.864 47.826 0.00 0.00 0.00 3.36
30 31 2.705658 CCATGAGGCTACATTACCAGGA 59.294 50.000 0.00 0.00 0.00 3.86
31 32 2.439507 ACCATGAGGCTACATTACCAGG 59.560 50.000 0.00 0.00 39.06 4.45
32 33 3.470709 CACCATGAGGCTACATTACCAG 58.529 50.000 0.00 0.00 39.06 4.00
33 34 2.421388 GCACCATGAGGCTACATTACCA 60.421 50.000 0.00 0.00 39.06 3.25
34 35 2.222027 GCACCATGAGGCTACATTACC 58.778 52.381 0.00 0.00 39.06 2.85
35 36 2.917933 TGCACCATGAGGCTACATTAC 58.082 47.619 9.48 0.00 39.06 1.89
36 37 3.743521 GATGCACCATGAGGCTACATTA 58.256 45.455 9.48 0.00 39.06 1.90
37 38 2.579873 GATGCACCATGAGGCTACATT 58.420 47.619 9.48 0.00 39.06 2.71
38 39 1.541889 CGATGCACCATGAGGCTACAT 60.542 52.381 9.48 0.00 39.06 2.29
39 40 0.179076 CGATGCACCATGAGGCTACA 60.179 55.000 9.48 0.00 39.06 2.74
40 41 0.179073 ACGATGCACCATGAGGCTAC 60.179 55.000 9.48 3.83 39.06 3.58
41 42 0.179076 CACGATGCACCATGAGGCTA 60.179 55.000 9.48 0.00 39.06 3.93
42 43 1.450848 CACGATGCACCATGAGGCT 60.451 57.895 9.48 0.00 39.06 4.58
43 44 2.475466 CCACGATGCACCATGAGGC 61.475 63.158 0.00 0.00 39.06 4.70
44 45 0.677731 AACCACGATGCACCATGAGG 60.678 55.000 0.00 0.00 42.21 3.86
45 46 0.448990 CAACCACGATGCACCATGAG 59.551 55.000 0.00 0.00 0.00 2.90
46 47 0.959867 CCAACCACGATGCACCATGA 60.960 55.000 0.00 0.00 0.00 3.07
47 48 0.959867 TCCAACCACGATGCACCATG 60.960 55.000 0.00 0.00 0.00 3.66
48 49 0.677731 CTCCAACCACGATGCACCAT 60.678 55.000 0.00 0.00 0.00 3.55
49 50 1.302431 CTCCAACCACGATGCACCA 60.302 57.895 0.00 0.00 0.00 4.17
50 51 1.003839 TCTCCAACCACGATGCACC 60.004 57.895 0.00 0.00 0.00 5.01
51 52 1.639298 GCTCTCCAACCACGATGCAC 61.639 60.000 0.00 0.00 0.00 4.57
52 53 1.375908 GCTCTCCAACCACGATGCA 60.376 57.895 0.00 0.00 0.00 3.96
53 54 2.456119 CGCTCTCCAACCACGATGC 61.456 63.158 0.00 0.00 0.00 3.91
54 55 1.811266 CCGCTCTCCAACCACGATG 60.811 63.158 0.00 0.00 0.00 3.84
55 56 2.283529 ACCGCTCTCCAACCACGAT 61.284 57.895 0.00 0.00 0.00 3.73
56 57 2.915659 ACCGCTCTCCAACCACGA 60.916 61.111 0.00 0.00 0.00 4.35
57 58 2.738521 CACCGCTCTCCAACCACG 60.739 66.667 0.00 0.00 0.00 4.94
58 59 0.818040 AAACACCGCTCTCCAACCAC 60.818 55.000 0.00 0.00 0.00 4.16
59 60 0.534203 GAAACACCGCTCTCCAACCA 60.534 55.000 0.00 0.00 0.00 3.67
60 61 1.566018 CGAAACACCGCTCTCCAACC 61.566 60.000 0.00 0.00 0.00 3.77
61 62 1.566018 CCGAAACACCGCTCTCCAAC 61.566 60.000 0.00 0.00 0.00 3.77
62 63 1.301401 CCGAAACACCGCTCTCCAA 60.301 57.895 0.00 0.00 0.00 3.53
63 64 2.342279 CCGAAACACCGCTCTCCA 59.658 61.111 0.00 0.00 0.00 3.86
64 65 3.119096 GCCGAAACACCGCTCTCC 61.119 66.667 0.00 0.00 0.00 3.71
65 66 3.119096 GGCCGAAACACCGCTCTC 61.119 66.667 0.00 0.00 0.00 3.20
66 67 4.699522 GGGCCGAAACACCGCTCT 62.700 66.667 0.00 0.00 0.00 4.09
75 76 4.311445 TTACACGCGGGGCCGAAA 62.311 61.111 15.46 0.00 42.83 3.46
76 77 4.745751 CTTACACGCGGGGCCGAA 62.746 66.667 15.46 0.00 42.83 4.30
79 80 3.428282 CAACTTACACGCGGGGCC 61.428 66.667 15.46 0.00 0.00 5.80
80 81 3.428282 CCAACTTACACGCGGGGC 61.428 66.667 15.46 0.00 0.00 5.80
81 82 2.031465 ACCAACTTACACGCGGGG 59.969 61.111 15.46 5.78 0.00 5.73
82 83 2.322081 CCACCAACTTACACGCGGG 61.322 63.158 6.92 6.92 0.00 6.13
83 84 2.322081 CCCACCAACTTACACGCGG 61.322 63.158 12.47 1.27 0.00 6.46
84 85 2.961669 GCCCACCAACTTACACGCG 61.962 63.158 3.53 3.53 0.00 6.01
85 86 1.599797 AGCCCACCAACTTACACGC 60.600 57.895 0.00 0.00 0.00 5.34
86 87 1.852067 GCAGCCCACCAACTTACACG 61.852 60.000 0.00 0.00 0.00 4.49
87 88 0.537371 AGCAGCCCACCAACTTACAC 60.537 55.000 0.00 0.00 0.00 2.90
88 89 0.184933 AAGCAGCCCACCAACTTACA 59.815 50.000 0.00 0.00 0.00 2.41
89 90 0.598065 CAAGCAGCCCACCAACTTAC 59.402 55.000 0.00 0.00 0.00 2.34
90 91 0.539438 CCAAGCAGCCCACCAACTTA 60.539 55.000 0.00 0.00 0.00 2.24
91 92 1.833934 CCAAGCAGCCCACCAACTT 60.834 57.895 0.00 0.00 0.00 2.66
92 93 2.203538 CCAAGCAGCCCACCAACT 60.204 61.111 0.00 0.00 0.00 3.16
93 94 2.203480 TCCAAGCAGCCCACCAAC 60.203 61.111 0.00 0.00 0.00 3.77
94 95 2.115910 CTCCAAGCAGCCCACCAA 59.884 61.111 0.00 0.00 0.00 3.67
95 96 2.853542 TCTCCAAGCAGCCCACCA 60.854 61.111 0.00 0.00 0.00 4.17
96 97 2.045536 CTCTCCAAGCAGCCCACC 60.046 66.667 0.00 0.00 0.00 4.61
97 98 2.045536 CCTCTCCAAGCAGCCCAC 60.046 66.667 0.00 0.00 0.00 4.61
98 99 2.530151 ACCTCTCCAAGCAGCCCA 60.530 61.111 0.00 0.00 0.00 5.36
99 100 2.270527 GACCTCTCCAAGCAGCCC 59.729 66.667 0.00 0.00 0.00 5.19
100 101 2.125350 CGACCTCTCCAAGCAGCC 60.125 66.667 0.00 0.00 0.00 4.85
101 102 2.125350 CCGACCTCTCCAAGCAGC 60.125 66.667 0.00 0.00 0.00 5.25
102 103 1.079543 CACCGACCTCTCCAAGCAG 60.080 63.158 0.00 0.00 0.00 4.24
103 104 2.583441 CCACCGACCTCTCCAAGCA 61.583 63.158 0.00 0.00 0.00 3.91
104 105 2.266055 CCACCGACCTCTCCAAGC 59.734 66.667 0.00 0.00 0.00 4.01
105 106 2.982130 CCCACCGACCTCTCCAAG 59.018 66.667 0.00 0.00 0.00 3.61
106 107 3.319198 GCCCACCGACCTCTCCAA 61.319 66.667 0.00 0.00 0.00 3.53
107 108 4.316823 AGCCCACCGACCTCTCCA 62.317 66.667 0.00 0.00 0.00 3.86
108 109 3.462678 GAGCCCACCGACCTCTCC 61.463 72.222 0.00 0.00 0.00 3.71
109 110 2.680352 TGAGCCCACCGACCTCTC 60.680 66.667 0.00 0.00 0.00 3.20
110 111 2.997897 GTGAGCCCACCGACCTCT 60.998 66.667 0.00 0.00 37.33 3.69
111 112 2.997897 AGTGAGCCCACCGACCTC 60.998 66.667 0.00 0.00 44.22 3.85
112 113 2.997897 GAGTGAGCCCACCGACCT 60.998 66.667 0.00 0.00 44.22 3.85
113 114 3.311110 TGAGTGAGCCCACCGACC 61.311 66.667 0.00 0.00 44.22 4.79
114 115 2.048127 GTGAGTGAGCCCACCGAC 60.048 66.667 0.00 0.00 44.22 4.79
115 116 3.311110 GGTGAGTGAGCCCACCGA 61.311 66.667 0.00 0.00 44.22 4.69
118 119 1.267121 TCTTAGGTGAGTGAGCCCAC 58.733 55.000 0.00 0.00 43.50 4.61
119 120 2.237143 CAATCTTAGGTGAGTGAGCCCA 59.763 50.000 0.00 0.00 34.41 5.36
120 121 2.237392 ACAATCTTAGGTGAGTGAGCCC 59.763 50.000 0.00 0.00 35.83 5.19
121 122 3.055819 TCACAATCTTAGGTGAGTGAGCC 60.056 47.826 0.00 0.00 39.00 4.70
122 123 4.193826 TCACAATCTTAGGTGAGTGAGC 57.806 45.455 0.00 0.00 39.00 4.26
123 124 5.406780 GTGTTCACAATCTTAGGTGAGTGAG 59.593 44.000 0.00 0.00 44.12 3.51
124 125 5.163353 TGTGTTCACAATCTTAGGTGAGTGA 60.163 40.000 2.99 0.00 44.12 3.41
125 126 5.056480 TGTGTTCACAATCTTAGGTGAGTG 58.944 41.667 2.99 0.00 44.12 3.51
126 127 5.290493 TGTGTTCACAATCTTAGGTGAGT 57.710 39.130 2.99 0.00 44.12 3.41
127 128 5.122869 CCATGTGTTCACAATCTTAGGTGAG 59.877 44.000 9.68 0.00 44.12 3.51
128 129 5.003160 CCATGTGTTCACAATCTTAGGTGA 58.997 41.667 9.68 0.00 41.93 4.02
129 130 4.379813 GCCATGTGTTCACAATCTTAGGTG 60.380 45.833 9.68 1.62 36.36 4.00
130 131 3.758554 GCCATGTGTTCACAATCTTAGGT 59.241 43.478 9.68 0.00 0.00 3.08
131 132 3.758023 TGCCATGTGTTCACAATCTTAGG 59.242 43.478 9.68 6.63 0.00 2.69
132 133 5.375417 TTGCCATGTGTTCACAATCTTAG 57.625 39.130 9.68 0.00 0.00 2.18
133 134 5.712004 CATTGCCATGTGTTCACAATCTTA 58.288 37.500 9.68 0.00 0.00 2.10
134 135 4.562082 CATTGCCATGTGTTCACAATCTT 58.438 39.130 9.68 0.00 0.00 2.40
135 136 3.615592 GCATTGCCATGTGTTCACAATCT 60.616 43.478 9.68 0.00 32.28 2.40
136 137 2.669434 GCATTGCCATGTGTTCACAATC 59.331 45.455 9.68 3.33 32.28 2.67
137 138 2.037381 TGCATTGCCATGTGTTCACAAT 59.963 40.909 9.68 0.00 32.28 2.71
138 139 1.411612 TGCATTGCCATGTGTTCACAA 59.588 42.857 9.68 0.00 32.28 3.33
139 140 1.038280 TGCATTGCCATGTGTTCACA 58.962 45.000 6.12 8.09 32.28 3.58
140 141 2.151881 TTGCATTGCCATGTGTTCAC 57.848 45.000 6.12 0.00 32.28 3.18
141 142 2.904697 TTTGCATTGCCATGTGTTCA 57.095 40.000 6.12 0.00 32.28 3.18
142 143 4.689812 TGTATTTTGCATTGCCATGTGTTC 59.310 37.500 6.12 0.00 32.28 3.18
143 144 4.639334 TGTATTTTGCATTGCCATGTGTT 58.361 34.783 6.12 0.00 32.28 3.32
144 145 4.268797 TGTATTTTGCATTGCCATGTGT 57.731 36.364 6.12 0.00 32.28 3.72
145 146 4.870991 TCATGTATTTTGCATTGCCATGTG 59.129 37.500 17.24 2.17 32.28 3.21
146 147 4.871557 GTCATGTATTTTGCATTGCCATGT 59.128 37.500 17.24 2.41 32.28 3.21
147 148 4.271533 GGTCATGTATTTTGCATTGCCATG 59.728 41.667 6.12 10.91 0.00 3.66
148 149 4.444536 GGTCATGTATTTTGCATTGCCAT 58.555 39.130 6.12 0.00 0.00 4.40
149 150 3.369261 GGGTCATGTATTTTGCATTGCCA 60.369 43.478 6.12 0.00 0.00 4.92
150 151 3.197265 GGGTCATGTATTTTGCATTGCC 58.803 45.455 6.12 0.00 0.00 4.52
151 152 3.197265 GGGGTCATGTATTTTGCATTGC 58.803 45.455 0.46 0.46 0.00 3.56
152 153 4.468765 TGGGGTCATGTATTTTGCATTG 57.531 40.909 0.00 0.00 0.00 2.82
153 154 4.323409 GGTTGGGGTCATGTATTTTGCATT 60.323 41.667 0.00 0.00 0.00 3.56
154 155 3.197549 GGTTGGGGTCATGTATTTTGCAT 59.802 43.478 0.00 0.00 0.00 3.96
155 156 2.564947 GGTTGGGGTCATGTATTTTGCA 59.435 45.455 0.00 0.00 0.00 4.08
156 157 2.093711 GGGTTGGGGTCATGTATTTTGC 60.094 50.000 0.00 0.00 0.00 3.68
157 158 2.499693 GGGGTTGGGGTCATGTATTTTG 59.500 50.000 0.00 0.00 0.00 2.44
158 159 2.561069 GGGGGTTGGGGTCATGTATTTT 60.561 50.000 0.00 0.00 0.00 1.82
159 160 1.007842 GGGGGTTGGGGTCATGTATTT 59.992 52.381 0.00 0.00 0.00 1.40
160 161 0.634465 GGGGGTTGGGGTCATGTATT 59.366 55.000 0.00 0.00 0.00 1.89
161 162 0.553862 TGGGGGTTGGGGTCATGTAT 60.554 55.000 0.00 0.00 0.00 2.29
162 163 1.151565 TGGGGGTTGGGGTCATGTA 60.152 57.895 0.00 0.00 0.00 2.29
163 164 2.453497 TGGGGGTTGGGGTCATGT 60.453 61.111 0.00 0.00 0.00 3.21
164 165 2.037208 GTGGGGGTTGGGGTCATG 59.963 66.667 0.00 0.00 0.00 3.07
165 166 3.272847 GGTGGGGGTTGGGGTCAT 61.273 66.667 0.00 0.00 0.00 3.06
166 167 4.865228 TGGTGGGGGTTGGGGTCA 62.865 66.667 0.00 0.00 0.00 4.02
167 168 3.979497 CTGGTGGGGGTTGGGGTC 61.979 72.222 0.00 0.00 0.00 4.46
178 179 1.176527 CACATTTGCTACCCTGGTGG 58.823 55.000 0.00 0.00 41.37 4.61
179 180 1.909700 ACACATTTGCTACCCTGGTG 58.090 50.000 0.00 0.00 0.00 4.17
180 181 3.799432 TTACACATTTGCTACCCTGGT 57.201 42.857 0.00 0.00 0.00 4.00
181 182 5.650266 TGTTATTACACATTTGCTACCCTGG 59.350 40.000 0.00 0.00 0.00 4.45
182 183 6.677920 GCTGTTATTACACATTTGCTACCCTG 60.678 42.308 0.00 0.00 0.00 4.45
183 184 5.357032 GCTGTTATTACACATTTGCTACCCT 59.643 40.000 0.00 0.00 0.00 4.34
184 185 5.578776 GCTGTTATTACACATTTGCTACCC 58.421 41.667 0.00 0.00 0.00 3.69
185 186 5.163794 ACGCTGTTATTACACATTTGCTACC 60.164 40.000 0.00 0.00 0.00 3.18
186 187 5.864986 ACGCTGTTATTACACATTTGCTAC 58.135 37.500 0.00 0.00 0.00 3.58
187 188 6.814644 ACTACGCTGTTATTACACATTTGCTA 59.185 34.615 0.00 0.00 0.00 3.49
188 189 5.642063 ACTACGCTGTTATTACACATTTGCT 59.358 36.000 0.00 0.00 0.00 3.91
189 190 5.864986 ACTACGCTGTTATTACACATTTGC 58.135 37.500 0.00 0.00 0.00 3.68
190 191 8.436970 TGTAACTACGCTGTTATTACACATTTG 58.563 33.333 4.54 0.00 35.27 2.32
191 192 8.537049 TGTAACTACGCTGTTATTACACATTT 57.463 30.769 4.54 0.00 35.27 2.32
196 197 6.680810 AGTGTGTAACTACGCTGTTATTACA 58.319 36.000 12.50 12.50 39.74 2.41
197 198 8.673626 TTAGTGTGTAACTACGCTGTTATTAC 57.326 34.615 0.00 7.44 41.21 1.89
198 199 9.128107 GTTTAGTGTGTAACTACGCTGTTATTA 57.872 33.333 0.00 0.00 41.21 0.98
199 200 7.652909 TGTTTAGTGTGTAACTACGCTGTTATT 59.347 33.333 0.00 0.00 41.21 1.40
200 201 7.147312 TGTTTAGTGTGTAACTACGCTGTTAT 58.853 34.615 0.00 0.00 41.21 1.89
201 202 6.502652 TGTTTAGTGTGTAACTACGCTGTTA 58.497 36.000 0.00 0.00 41.21 2.41
202 203 5.350633 TGTTTAGTGTGTAACTACGCTGTT 58.649 37.500 0.00 0.00 41.21 3.16
203 204 4.935702 TGTTTAGTGTGTAACTACGCTGT 58.064 39.130 0.00 0.00 41.21 4.40
204 205 5.232626 TGTTGTTTAGTGTGTAACTACGCTG 59.767 40.000 0.00 0.00 41.21 5.18
205 206 5.350633 TGTTGTTTAGTGTGTAACTACGCT 58.649 37.500 2.40 0.00 41.21 5.07
206 207 5.640218 TGTTGTTTAGTGTGTAACTACGC 57.360 39.130 0.00 0.00 41.21 4.42
207 208 7.633361 AGATGTTGTTTAGTGTGTAACTACG 57.367 36.000 0.00 0.00 41.21 3.51
208 209 8.493547 GGAAGATGTTGTTTAGTGTGTAACTAC 58.506 37.037 0.00 0.00 41.21 2.73
209 210 7.658575 GGGAAGATGTTGTTTAGTGTGTAACTA 59.341 37.037 0.00 0.00 40.56 2.24
210 211 6.485648 GGGAAGATGTTGTTTAGTGTGTAACT 59.514 38.462 0.00 0.00 43.40 2.24
211 212 6.293790 GGGGAAGATGTTGTTTAGTGTGTAAC 60.294 42.308 0.00 0.00 37.35 2.50
212 213 5.766174 GGGGAAGATGTTGTTTAGTGTGTAA 59.234 40.000 0.00 0.00 0.00 2.41
213 214 5.072600 AGGGGAAGATGTTGTTTAGTGTGTA 59.927 40.000 0.00 0.00 0.00 2.90
214 215 4.141251 AGGGGAAGATGTTGTTTAGTGTGT 60.141 41.667 0.00 0.00 0.00 3.72
215 216 4.398319 AGGGGAAGATGTTGTTTAGTGTG 58.602 43.478 0.00 0.00 0.00 3.82
216 217 4.724279 AGGGGAAGATGTTGTTTAGTGT 57.276 40.909 0.00 0.00 0.00 3.55
217 218 5.070001 TGAAGGGGAAGATGTTGTTTAGTG 58.930 41.667 0.00 0.00 0.00 2.74
218 219 5.319043 TGAAGGGGAAGATGTTGTTTAGT 57.681 39.130 0.00 0.00 0.00 2.24
219 220 5.711976 ACATGAAGGGGAAGATGTTGTTTAG 59.288 40.000 0.00 0.00 0.00 1.85
220 221 5.640147 ACATGAAGGGGAAGATGTTGTTTA 58.360 37.500 0.00 0.00 0.00 2.01
221 222 4.482990 ACATGAAGGGGAAGATGTTGTTT 58.517 39.130 0.00 0.00 0.00 2.83
222 223 4.082125 GACATGAAGGGGAAGATGTTGTT 58.918 43.478 0.00 0.00 0.00 2.83
223 224 3.331889 AGACATGAAGGGGAAGATGTTGT 59.668 43.478 0.00 0.00 0.00 3.32
224 225 3.960571 AGACATGAAGGGGAAGATGTTG 58.039 45.455 0.00 0.00 0.00 3.33
225 226 4.664688 AAGACATGAAGGGGAAGATGTT 57.335 40.909 0.00 0.00 0.00 2.71
226 227 4.290722 AGAAAGACATGAAGGGGAAGATGT 59.709 41.667 0.00 0.00 0.00 3.06
227 228 4.853007 AGAAAGACATGAAGGGGAAGATG 58.147 43.478 0.00 0.00 0.00 2.90
228 229 6.619023 AGATAGAAAGACATGAAGGGGAAGAT 59.381 38.462 0.00 0.00 0.00 2.40
229 230 5.966935 AGATAGAAAGACATGAAGGGGAAGA 59.033 40.000 0.00 0.00 0.00 2.87
230 231 6.245890 AGATAGAAAGACATGAAGGGGAAG 57.754 41.667 0.00 0.00 0.00 3.46
231 232 6.642733 AAGATAGAAAGACATGAAGGGGAA 57.357 37.500 0.00 0.00 0.00 3.97
232 233 6.445139 AGAAAGATAGAAAGACATGAAGGGGA 59.555 38.462 0.00 0.00 0.00 4.81
233 234 6.657875 AGAAAGATAGAAAGACATGAAGGGG 58.342 40.000 0.00 0.00 0.00 4.79
234 235 9.323985 CTTAGAAAGATAGAAAGACATGAAGGG 57.676 37.037 0.00 0.00 0.00 3.95
258 259 9.159254 TGGTATGTACATATGAGAGGAAATCTT 57.841 33.333 18.27 0.00 38.84 2.40
259 260 8.727100 TGGTATGTACATATGAGAGGAAATCT 57.273 34.615 18.27 0.00 42.61 2.40
260 261 9.376075 CATGGTATGTACATATGAGAGGAAATC 57.624 37.037 18.27 1.60 0.00 2.17
261 262 7.826252 GCATGGTATGTACATATGAGAGGAAAT 59.174 37.037 18.27 1.06 0.00 2.17
262 263 7.016563 AGCATGGTATGTACATATGAGAGGAAA 59.983 37.037 18.27 0.00 0.00 3.13
263 264 6.498303 AGCATGGTATGTACATATGAGAGGAA 59.502 38.462 18.27 0.00 0.00 3.36
264 265 6.019108 AGCATGGTATGTACATATGAGAGGA 58.981 40.000 18.27 0.00 0.00 3.71
265 266 6.291648 AGCATGGTATGTACATATGAGAGG 57.708 41.667 18.27 8.00 0.00 3.69
266 267 6.032717 CGAGCATGGTATGTACATATGAGAG 58.967 44.000 18.27 9.22 0.00 3.20
267 268 5.622233 GCGAGCATGGTATGTACATATGAGA 60.622 44.000 18.27 4.11 0.00 3.27
268 269 4.564372 GCGAGCATGGTATGTACATATGAG 59.436 45.833 18.27 10.13 0.00 2.90
269 270 4.021544 TGCGAGCATGGTATGTACATATGA 60.022 41.667 18.27 8.74 0.00 2.15
270 271 4.244862 TGCGAGCATGGTATGTACATATG 58.755 43.478 18.27 14.39 0.00 1.78
271 272 4.535526 TGCGAGCATGGTATGTACATAT 57.464 40.909 18.27 1.27 0.00 1.78
272 273 4.055360 GTTGCGAGCATGGTATGTACATA 58.945 43.478 11.62 11.62 0.00 2.29
273 274 2.872245 GTTGCGAGCATGGTATGTACAT 59.128 45.455 13.93 13.93 0.00 2.29
274 275 2.276201 GTTGCGAGCATGGTATGTACA 58.724 47.619 0.00 0.00 0.00 2.90
275 276 1.257936 CGTTGCGAGCATGGTATGTAC 59.742 52.381 0.00 0.00 0.00 2.90
276 277 1.134936 ACGTTGCGAGCATGGTATGTA 60.135 47.619 0.00 0.00 0.00 2.29
277 278 0.391130 ACGTTGCGAGCATGGTATGT 60.391 50.000 0.00 0.00 0.00 2.29
278 279 0.726827 AACGTTGCGAGCATGGTATG 59.273 50.000 0.00 0.00 0.00 2.39
279 280 1.006832 GAACGTTGCGAGCATGGTAT 58.993 50.000 5.00 0.00 0.00 2.73
280 281 0.319986 TGAACGTTGCGAGCATGGTA 60.320 50.000 5.00 0.00 0.00 3.25
281 282 1.163420 TTGAACGTTGCGAGCATGGT 61.163 50.000 5.00 0.00 0.00 3.55
282 283 0.725784 GTTGAACGTTGCGAGCATGG 60.726 55.000 5.00 0.00 0.00 3.66
283 284 1.054348 CGTTGAACGTTGCGAGCATG 61.054 55.000 5.00 0.00 36.74 4.06
284 285 1.204062 CGTTGAACGTTGCGAGCAT 59.796 52.632 5.00 0.00 36.74 3.79
285 286 1.422179 TTCGTTGAACGTTGCGAGCA 61.422 50.000 17.86 0.00 43.14 4.26
286 287 0.985416 GTTCGTTGAACGTTGCGAGC 60.985 55.000 17.86 11.18 43.14 5.03
287 288 3.038472 GTTCGTTGAACGTTGCGAG 57.962 52.632 17.86 0.00 43.14 5.03
295 296 0.653636 TGAGGTTGCGTTCGTTGAAC 59.346 50.000 0.00 0.00 38.97 3.18
296 297 1.062880 GTTGAGGTTGCGTTCGTTGAA 59.937 47.619 0.00 0.00 0.00 2.69
297 298 0.653636 GTTGAGGTTGCGTTCGTTGA 59.346 50.000 0.00 0.00 0.00 3.18
298 299 0.653323 CGTTGAGGTTGCGTTCGTTG 60.653 55.000 0.00 0.00 0.00 4.10
299 300 0.806884 TCGTTGAGGTTGCGTTCGTT 60.807 50.000 0.00 0.00 0.00 3.85
300 301 1.227031 TCGTTGAGGTTGCGTTCGT 60.227 52.632 0.00 0.00 0.00 3.85
301 302 1.200839 GTCGTTGAGGTTGCGTTCG 59.799 57.895 0.00 0.00 0.00 3.95
302 303 0.232303 CAGTCGTTGAGGTTGCGTTC 59.768 55.000 0.00 0.00 0.00 3.95
303 304 0.179094 TCAGTCGTTGAGGTTGCGTT 60.179 50.000 0.00 0.00 0.00 4.84
304 305 0.179094 TTCAGTCGTTGAGGTTGCGT 60.179 50.000 0.00 0.00 37.07 5.24
305 306 0.508641 CTTCAGTCGTTGAGGTTGCG 59.491 55.000 0.00 0.00 37.07 4.85
306 307 1.865865 TCTTCAGTCGTTGAGGTTGC 58.134 50.000 2.86 0.00 37.07 4.17
307 308 3.187227 CCATTCTTCAGTCGTTGAGGTTG 59.813 47.826 2.86 3.01 37.07 3.77
308 309 3.181454 ACCATTCTTCAGTCGTTGAGGTT 60.181 43.478 0.00 0.00 37.07 3.50
309 310 2.368875 ACCATTCTTCAGTCGTTGAGGT 59.631 45.455 0.00 0.00 37.07 3.85
310 311 2.738846 CACCATTCTTCAGTCGTTGAGG 59.261 50.000 0.00 0.00 37.07 3.86
311 312 2.158449 GCACCATTCTTCAGTCGTTGAG 59.842 50.000 0.00 0.00 37.07 3.02
312 313 2.143122 GCACCATTCTTCAGTCGTTGA 58.857 47.619 0.00 0.00 0.00 3.18
313 314 1.872952 TGCACCATTCTTCAGTCGTTG 59.127 47.619 0.00 0.00 0.00 4.10
314 315 2.254546 TGCACCATTCTTCAGTCGTT 57.745 45.000 0.00 0.00 0.00 3.85
315 316 2.254546 TTGCACCATTCTTCAGTCGT 57.745 45.000 0.00 0.00 0.00 4.34
316 317 2.743664 TCATTGCACCATTCTTCAGTCG 59.256 45.455 0.00 0.00 0.00 4.18
317 318 4.217118 ACTTCATTGCACCATTCTTCAGTC 59.783 41.667 0.00 0.00 0.00 3.51
318 319 4.022589 CACTTCATTGCACCATTCTTCAGT 60.023 41.667 0.00 0.00 0.00 3.41
319 320 4.022589 ACACTTCATTGCACCATTCTTCAG 60.023 41.667 0.00 0.00 0.00 3.02
320 321 3.890756 ACACTTCATTGCACCATTCTTCA 59.109 39.130 0.00 0.00 0.00 3.02
321 322 4.232221 CACACTTCATTGCACCATTCTTC 58.768 43.478 0.00 0.00 0.00 2.87
322 323 3.553508 GCACACTTCATTGCACCATTCTT 60.554 43.478 0.00 0.00 38.68 2.52
323 324 2.029649 GCACACTTCATTGCACCATTCT 60.030 45.455 0.00 0.00 38.68 2.40
324 325 2.331194 GCACACTTCATTGCACCATTC 58.669 47.619 0.00 0.00 38.68 2.67
325 326 1.336148 CGCACACTTCATTGCACCATT 60.336 47.619 0.00 0.00 38.76 3.16
326 327 0.241749 CGCACACTTCATTGCACCAT 59.758 50.000 0.00 0.00 38.76 3.55
327 328 1.653667 CGCACACTTCATTGCACCA 59.346 52.632 0.00 0.00 38.76 4.17
328 329 1.730547 GCGCACACTTCATTGCACC 60.731 57.895 0.30 0.00 38.76 5.01
329 330 0.516877 TAGCGCACACTTCATTGCAC 59.483 50.000 11.47 0.00 38.76 4.57
330 331 0.798159 CTAGCGCACACTTCATTGCA 59.202 50.000 11.47 0.00 38.76 4.08
331 332 0.798776 ACTAGCGCACACTTCATTGC 59.201 50.000 11.47 0.00 35.26 3.56
332 333 3.228749 CAAACTAGCGCACACTTCATTG 58.771 45.455 11.47 0.00 0.00 2.82
333 334 2.878406 ACAAACTAGCGCACACTTCATT 59.122 40.909 11.47 0.00 0.00 2.57
334 335 2.494059 ACAAACTAGCGCACACTTCAT 58.506 42.857 11.47 0.00 0.00 2.57
335 336 1.948104 ACAAACTAGCGCACACTTCA 58.052 45.000 11.47 0.00 0.00 3.02
336 337 3.493503 ACTTACAAACTAGCGCACACTTC 59.506 43.478 11.47 0.00 0.00 3.01
337 338 3.247648 CACTTACAAACTAGCGCACACTT 59.752 43.478 11.47 0.00 0.00 3.16
338 339 2.800544 CACTTACAAACTAGCGCACACT 59.199 45.455 11.47 0.00 0.00 3.55
339 340 2.542595 ACACTTACAAACTAGCGCACAC 59.457 45.455 11.47 0.00 0.00 3.82
340 341 2.828877 ACACTTACAAACTAGCGCACA 58.171 42.857 11.47 0.00 0.00 4.57
341 342 3.872560 AACACTTACAAACTAGCGCAC 57.127 42.857 11.47 0.00 0.00 5.34
342 343 4.124238 AGAAACACTTACAAACTAGCGCA 58.876 39.130 11.47 0.00 0.00 6.09
343 344 4.727235 AGAAACACTTACAAACTAGCGC 57.273 40.909 0.00 0.00 0.00 5.92
344 345 6.711579 TCAAAGAAACACTTACAAACTAGCG 58.288 36.000 0.00 0.00 37.93 4.26
345 346 8.795341 GTTTCAAAGAAACACTTACAAACTAGC 58.205 33.333 15.54 0.00 37.33 3.42
346 347 8.995906 CGTTTCAAAGAAACACTTACAAACTAG 58.004 33.333 19.09 0.00 37.70 2.57
347 348 8.719648 TCGTTTCAAAGAAACACTTACAAACTA 58.280 29.630 19.09 0.00 37.70 2.24
348 349 7.586747 TCGTTTCAAAGAAACACTTACAAACT 58.413 30.769 19.09 0.00 37.70 2.66
349 350 7.784790 TCGTTTCAAAGAAACACTTACAAAC 57.215 32.000 19.09 0.00 37.93 2.93
350 351 8.973835 AATCGTTTCAAAGAAACACTTACAAA 57.026 26.923 19.09 0.00 37.93 2.83
351 352 8.973835 AAATCGTTTCAAAGAAACACTTACAA 57.026 26.923 19.09 0.69 37.93 2.41
352 353 8.855279 CAAAATCGTTTCAAAGAAACACTTACA 58.145 29.630 19.09 0.69 37.93 2.41
353 354 8.856247 ACAAAATCGTTTCAAAGAAACACTTAC 58.144 29.630 19.09 0.00 37.93 2.34
354 355 8.973835 ACAAAATCGTTTCAAAGAAACACTTA 57.026 26.923 19.09 5.37 37.93 2.24
355 356 7.883229 ACAAAATCGTTTCAAAGAAACACTT 57.117 28.000 19.09 10.56 40.98 3.16
356 357 7.883229 AACAAAATCGTTTCAAAGAAACACT 57.117 28.000 19.09 5.97 0.00 3.55
357 358 8.927315 AAAACAAAATCGTTTCAAAGAAACAC 57.073 26.923 19.09 0.00 38.13 3.32
358 359 9.587461 GAAAAACAAAATCGTTTCAAAGAAACA 57.413 25.926 19.09 9.30 38.13 2.83
359 360 9.587461 TGAAAAACAAAATCGTTTCAAAGAAAC 57.413 25.926 11.53 11.53 38.13 2.78
389 390 9.581099 AGAAACACTTACAAAATCGTTTCAATT 57.419 25.926 13.44 0.00 42.81 2.32
390 391 9.233232 GAGAAACACTTACAAAATCGTTTCAAT 57.767 29.630 13.44 0.00 42.81 2.57
391 392 8.237949 TGAGAAACACTTACAAAATCGTTTCAA 58.762 29.630 13.44 1.40 42.81 2.69
392 393 7.753659 TGAGAAACACTTACAAAATCGTTTCA 58.246 30.769 13.44 0.00 42.81 2.69
393 394 8.609478 TTGAGAAACACTTACAAAATCGTTTC 57.391 30.769 0.00 0.00 41.44 2.78
394 395 8.856247 GTTTGAGAAACACTTACAAAATCGTTT 58.144 29.630 0.00 0.00 41.04 3.60
395 396 7.486870 GGTTTGAGAAACACTTACAAAATCGTT 59.513 33.333 0.00 0.00 43.15 3.85
396 397 6.970613 GGTTTGAGAAACACTTACAAAATCGT 59.029 34.615 0.00 0.00 43.15 3.73
397 398 6.970043 TGGTTTGAGAAACACTTACAAAATCG 59.030 34.615 0.00 0.00 43.15 3.34
398 399 8.755018 CATGGTTTGAGAAACACTTACAAAATC 58.245 33.333 0.00 0.00 43.15 2.17
399 400 7.710475 CCATGGTTTGAGAAACACTTACAAAAT 59.290 33.333 2.57 0.00 43.15 1.82
400 401 7.038659 CCATGGTTTGAGAAACACTTACAAAA 58.961 34.615 2.57 0.00 43.15 2.44
401 402 6.153680 ACCATGGTTTGAGAAACACTTACAAA 59.846 34.615 13.00 0.00 43.15 2.83
402 403 5.654650 ACCATGGTTTGAGAAACACTTACAA 59.345 36.000 13.00 0.00 43.15 2.41
403 404 5.197451 ACCATGGTTTGAGAAACACTTACA 58.803 37.500 13.00 0.00 43.15 2.41
404 405 5.767816 ACCATGGTTTGAGAAACACTTAC 57.232 39.130 13.00 0.00 43.15 2.34
405 406 7.467539 CGTTTACCATGGTTTGAGAAACACTTA 60.468 37.037 27.63 5.75 43.15 2.24
406 407 6.569780 GTTTACCATGGTTTGAGAAACACTT 58.430 36.000 25.38 0.00 43.15 3.16
407 408 5.220970 CGTTTACCATGGTTTGAGAAACACT 60.221 40.000 27.63 4.85 43.15 3.55
408 409 4.973663 CGTTTACCATGGTTTGAGAAACAC 59.026 41.667 27.63 12.26 43.15 3.32
409 410 4.498345 GCGTTTACCATGGTTTGAGAAACA 60.498 41.667 27.63 7.40 43.15 2.83
410 411 3.978855 GCGTTTACCATGGTTTGAGAAAC 59.021 43.478 25.38 23.44 40.65 2.78
427 428 0.604511 CCCAGGTTACCGAAGCGTTT 60.605 55.000 0.00 0.00 38.14 3.60
430 431 1.447314 GACCCAGGTTACCGAAGCG 60.447 63.158 0.00 0.00 38.14 4.68
434 435 4.123571 CCTGACCCAGGTTACCGA 57.876 61.111 4.88 0.00 45.82 4.69
443 444 1.628238 AACCGTTCACACCTGACCCA 61.628 55.000 0.00 0.00 0.00 4.51
463 464 5.529430 TCACATGTCATCGTAAGGTTTTTGT 59.471 36.000 0.00 0.00 38.47 2.83
538 539 0.618458 ACTTCTATTTCCGGGCAGCA 59.382 50.000 0.00 0.00 0.00 4.41
578 579 2.558795 AGATATACGCTGCAGGACGATT 59.441 45.455 17.12 7.06 0.00 3.34
623 816 3.704566 TCGCTCAAATGGATGTACCTAGT 59.295 43.478 0.00 0.00 39.86 2.57
661 854 9.583765 GTAAGACAGAAAGTAGATATTCCGTTT 57.416 33.333 0.00 0.00 0.00 3.60
741 934 1.808411 TTGCTGGACATCCGTTTCTC 58.192 50.000 0.00 0.00 39.43 2.87
1082 1288 3.427598 TTGTCGCCGTCGTGGTTCA 62.428 57.895 0.00 0.00 41.21 3.18
1186 1395 9.738832 GCAAAAGTTTTATATAAAAGGCGGATA 57.261 29.630 18.76 0.00 36.00 2.59
1187 1396 8.254508 TGCAAAAGTTTTATATAAAAGGCGGAT 58.745 29.630 18.76 3.79 36.00 4.18
1195 1404 9.697250 CGTCGATCTGCAAAAGTTTTATATAAA 57.303 29.630 3.71 3.71 0.00 1.40
1196 1405 7.849026 GCGTCGATCTGCAAAAGTTTTATATAA 59.151 33.333 0.00 0.00 0.00 0.98
1227 1436 2.182537 CCAGAAATGGCGGCTTGC 59.817 61.111 11.43 0.49 45.38 4.01
1245 1511 0.598680 GGATCGATTGCGTCAGGGAG 60.599 60.000 0.00 0.00 38.98 4.30
1256 1522 1.516161 CCATCGCACATGGATCGATT 58.484 50.000 13.72 0.00 40.48 3.34
1259 1525 1.838568 CTGCCATCGCACATGGATCG 61.839 60.000 14.66 0.00 41.12 3.69
1263 1529 1.105167 AATCCTGCCATCGCACATGG 61.105 55.000 7.24 7.24 41.12 3.66
1830 2112 1.301165 AGTAGCGGCGGTCGTTTTT 60.301 52.632 17.55 0.00 41.72 1.94
1831 2113 2.025418 CAGTAGCGGCGGTCGTTTT 61.025 57.895 17.55 0.00 41.72 2.43
1832 2114 2.431942 CAGTAGCGGCGGTCGTTT 60.432 61.111 17.55 0.00 41.72 3.60
1836 2118 2.027751 GATCCAGTAGCGGCGGTC 59.972 66.667 17.55 7.70 0.00 4.79
1907 2189 8.986929 ATTGGATTAGAGGACAAAGGAAATAG 57.013 34.615 0.00 0.00 0.00 1.73
1911 2193 6.387192 TGATTGGATTAGAGGACAAAGGAA 57.613 37.500 0.00 0.00 0.00 3.36
1914 2196 8.781196 CACATATGATTGGATTAGAGGACAAAG 58.219 37.037 10.38 0.00 0.00 2.77
1916 2198 7.805163 ACACATATGATTGGATTAGAGGACAA 58.195 34.615 10.38 0.00 0.00 3.18
1929 2211 8.947115 TCGGATCTAGTAGTACACATATGATTG 58.053 37.037 10.38 0.24 0.00 2.67
2014 2379 8.523915 TTCCAATCTACTACGTTAGGTAATCA 57.476 34.615 0.00 0.00 0.00 2.57
2086 2456 0.248907 AGATCATACGGCGACCAACG 60.249 55.000 16.62 0.00 45.66 4.10
2144 2515 7.937649 AGTAGGACTGATGGTTTTGTTTTAAC 58.062 34.615 0.00 0.00 0.00 2.01
2241 2612 2.103094 CTCCCAGTGGATCGAGCAATAA 59.897 50.000 11.95 0.00 40.80 1.40
2249 2620 1.620819 CCCTATTCTCCCAGTGGATCG 59.379 57.143 11.95 0.00 40.80 3.69
2296 2667 8.742554 AAAGTTACTTAAAAATGGCATTCTCG 57.257 30.769 14.04 3.62 0.00 4.04
2407 2782 7.439356 GCTTGTGATATTACTGTAGATGCAGAA 59.561 37.037 4.87 0.00 39.62 3.02
2411 2788 6.479990 TGTGCTTGTGATATTACTGTAGATGC 59.520 38.462 0.00 0.00 0.00 3.91
2412 2789 8.424274 TTGTGCTTGTGATATTACTGTAGATG 57.576 34.615 0.00 0.00 0.00 2.90
2448 2826 6.664515 TCAAATCCAAACAATCAAGTACGTC 58.335 36.000 0.00 0.00 0.00 4.34
2464 2968 5.068198 GGCAAGCAGAAGAATATCAAATCCA 59.932 40.000 0.00 0.00 0.00 3.41
2493 2997 4.734398 TTGCAACAAGTCCACAAGATTT 57.266 36.364 0.00 0.00 0.00 2.17
2517 3023 4.449743 GTGTGTAAGTACGCTCCAAAATCA 59.550 41.667 3.86 0.00 37.58 2.57
2670 3178 4.957296 TCTTAGACGGCAGTTTCTTCTTT 58.043 39.130 0.00 0.00 0.00 2.52
2867 3375 4.929211 CGTCAGGACATATTCAACTTGTGA 59.071 41.667 0.00 0.00 0.00 3.58
2955 3466 4.398319 AGCAGCTGTTACCTTGTGTTATT 58.602 39.130 16.64 0.00 0.00 1.40
2984 3495 6.249035 ACTGCGCTAGCTAAATAAAACAAA 57.751 33.333 13.93 0.00 45.42 2.83
2992 3503 2.959707 AGTAGGACTGCGCTAGCTAAAT 59.040 45.455 13.93 0.00 45.42 1.40
2993 3504 2.376109 AGTAGGACTGCGCTAGCTAAA 58.624 47.619 13.93 0.00 45.42 1.85
2994 3505 2.054232 AGTAGGACTGCGCTAGCTAA 57.946 50.000 13.93 0.00 45.42 3.09
2995 3506 2.054232 AAGTAGGACTGCGCTAGCTA 57.946 50.000 13.93 0.43 45.42 3.32
2996 3507 1.187087 AAAGTAGGACTGCGCTAGCT 58.813 50.000 13.93 0.00 45.42 3.32
3008 3519 6.708949 TGCTTTTACTGACCTTGTAAAGTAGG 59.291 38.462 0.00 0.00 44.25 3.18
3022 3533 9.462174 CAAACAGATTGTTATTGCTTTTACTGA 57.538 29.630 0.00 0.00 40.14 3.41
3088 3602 7.444629 TCTCAAAAAGGAACAGAATGATCAG 57.555 36.000 0.09 0.00 40.00 2.90
3136 3650 5.710099 AGGAGATAATAGGAGAGAAAGCGAG 59.290 44.000 0.00 0.00 0.00 5.03
3290 3805 3.119388 TGCATAGAACAATTGCTCCAAGC 60.119 43.478 5.05 7.58 42.82 4.01
3414 3929 3.389656 TCGGCACCTGATTATAATCACCA 59.610 43.478 21.67 10.74 40.32 4.17
3467 3982 8.038351 TGTTCATTTACCTGAATCGATGACTTA 58.962 33.333 0.00 0.00 37.47 2.24
3515 4030 8.090788 AGGAAGGAATATAGTTAGCACTTGAA 57.909 34.615 0.00 0.00 34.06 2.69
3527 4043 4.507512 GCAGGGGGAAAGGAAGGAATATAG 60.508 50.000 0.00 0.00 0.00 1.31
3528 4044 3.397955 GCAGGGGGAAAGGAAGGAATATA 59.602 47.826 0.00 0.00 0.00 0.86
3529 4045 2.177888 GCAGGGGGAAAGGAAGGAATAT 59.822 50.000 0.00 0.00 0.00 1.28
3530 4046 1.569072 GCAGGGGGAAAGGAAGGAATA 59.431 52.381 0.00 0.00 0.00 1.75
3531 4047 0.336392 GCAGGGGGAAAGGAAGGAAT 59.664 55.000 0.00 0.00 0.00 3.01
3532 4048 1.071314 TGCAGGGGGAAAGGAAGGAA 61.071 55.000 0.00 0.00 0.00 3.36
3533 4049 1.465188 TGCAGGGGGAAAGGAAGGA 60.465 57.895 0.00 0.00 0.00 3.36
3534 4050 1.000396 CTGCAGGGGGAAAGGAAGG 60.000 63.158 5.57 0.00 0.00 3.46
3535 4051 0.627986 ATCTGCAGGGGGAAAGGAAG 59.372 55.000 15.13 0.00 0.00 3.46
3536 4052 0.332632 CATCTGCAGGGGGAAAGGAA 59.667 55.000 15.13 0.00 0.00 3.36
3537 4053 1.574526 CCATCTGCAGGGGGAAAGGA 61.575 60.000 15.13 0.00 0.00 3.36
3538 4054 1.076485 CCATCTGCAGGGGGAAAGG 60.076 63.158 15.13 0.00 0.00 3.11
3539 4055 1.076485 CCCATCTGCAGGGGGAAAG 60.076 63.158 30.01 10.53 45.08 2.62
3540 4056 3.099171 CCCATCTGCAGGGGGAAA 58.901 61.111 30.01 5.79 45.08 3.13
3543 4059 0.031817 AAAATCCCATCTGCAGGGGG 60.032 55.000 28.69 28.69 46.77 5.40
3544 4060 1.342275 TGAAAATCCCATCTGCAGGGG 60.342 52.381 19.29 19.29 46.77 4.79
3546 4062 1.407979 GCTGAAAATCCCATCTGCAGG 59.592 52.381 15.13 0.00 39.46 4.85
3547 4063 2.097036 TGCTGAAAATCCCATCTGCAG 58.903 47.619 7.63 7.63 42.93 4.41
3548 4064 2.097036 CTGCTGAAAATCCCATCTGCA 58.903 47.619 7.05 7.05 44.72 4.41
3549 4065 2.097825 ACTGCTGAAAATCCCATCTGC 58.902 47.619 0.00 0.00 39.92 4.26
3550 4066 4.521146 ACTACTGCTGAAAATCCCATCTG 58.479 43.478 0.00 0.00 0.00 2.90
3551 4067 4.851639 ACTACTGCTGAAAATCCCATCT 57.148 40.909 0.00 0.00 0.00 2.90
3552 4068 5.904362 AAACTACTGCTGAAAATCCCATC 57.096 39.130 0.00 0.00 0.00 3.51
3553 4069 6.547510 GGATAAACTACTGCTGAAAATCCCAT 59.452 38.462 0.00 0.00 0.00 4.00
3554 4070 5.885912 GGATAAACTACTGCTGAAAATCCCA 59.114 40.000 0.00 0.00 0.00 4.37
3594 4400 0.466922 ATGCTGCCTGGCCAGAATAC 60.467 55.000 34.91 19.93 34.77 1.89
3642 4448 2.503871 GTGCTACTGTAGAACGTCGTC 58.496 52.381 18.64 0.00 0.00 4.20
3663 4469 1.820010 GCCAAAACAAGGGCTCTGGG 61.820 60.000 0.00 0.00 46.74 4.45
3789 4595 4.645136 TCTGAGGTATGCTTCATCGTAACT 59.355 41.667 0.00 0.00 30.15 2.24
3871 4680 6.549736 CCCCCTTTAAACCCATAAGTTATCAG 59.450 42.308 0.00 0.00 0.00 2.90
4130 4943 3.023119 CAATAACAATGGCAGGCTACCA 58.977 45.455 9.34 9.34 42.61 3.25
4330 5143 3.428045 GCTATGATGTTGGTTTGCCAGAC 60.428 47.826 0.00 0.00 46.91 3.51
4398 5211 6.681729 ACCTTGTTTAGAAGTGAGGTCATA 57.318 37.500 0.00 0.00 32.25 2.15
4527 5340 1.531365 CTCCTGCTTGCCCACCAAA 60.531 57.895 0.00 0.00 31.94 3.28
4797 5610 5.106876 AGTCATCATCATCCATGTTGTGA 57.893 39.130 0.00 0.00 34.79 3.58
4830 5643 1.251251 GCTTGAGGGATGCAACAACT 58.749 50.000 0.00 0.00 0.00 3.16
5031 5844 2.827921 CAAGGTTTTGCCAGGAGCTATT 59.172 45.455 0.00 0.00 44.23 1.73
5125 5938 6.649141 TGACATCTTCACTAATGTTACACACC 59.351 38.462 0.00 0.00 36.28 4.16
5191 6004 3.004315 AGACATACAAAACTTTGGTGCGG 59.996 43.478 7.09 0.00 42.34 5.69
5231 6044 5.237236 TGGAACAAAAACCTCCCTAGTAG 57.763 43.478 0.00 0.00 31.92 2.57
5238 6051 2.289010 CCATGCTGGAACAAAAACCTCC 60.289 50.000 0.00 0.00 40.96 4.30
5270 6083 4.786507 TGATTTCGCAGTTCATCAAACAG 58.213 39.130 0.00 0.00 40.56 3.16
5431 6271 6.536582 AGATGTTGACATGTTGTAGATGCTAC 59.463 38.462 0.00 0.00 36.57 3.58
5630 6474 8.237811 TGATGTTCTATATGCAAGTCACTAGA 57.762 34.615 0.00 0.00 0.00 2.43
5719 6563 4.495844 GCAGCCACTTCGAAATATTACACC 60.496 45.833 0.00 0.00 0.00 4.16
5731 6575 0.392998 ATACCCTTGCAGCCACTTCG 60.393 55.000 0.00 0.00 0.00 3.79
5780 6624 5.298777 ACATGATAAGCTTCTGAAGATTGCC 59.701 40.000 26.19 18.37 37.72 4.52
5799 6643 6.125327 ACACAATCGTTTTGTACAACATGA 57.875 33.333 16.78 16.78 0.00 3.07
5836 6680 6.046290 AGCGTTTTTAGGAGTATGGTTACT 57.954 37.500 0.00 0.00 41.45 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.