Multiple sequence alignment - TraesCS7B01G139900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G139900 chr7B 100.000 4513 0 0 1 4513 176244517 176240005 0.000000e+00 8335
1 TraesCS7B01G139900 chr7B 95.789 285 12 0 80 364 465935415 465935131 1.140000e-125 460
2 TraesCS7B01G139900 chr7B 92.632 190 14 0 3729 3918 218546275 218546086 1.600000e-69 274
3 TraesCS7B01G139900 chr7B 93.956 182 9 2 3736 3915 668908776 668908595 1.600000e-69 274
4 TraesCS7B01G139900 chr7B 96.774 93 2 1 1 92 465947751 465947659 2.170000e-33 154
5 TraesCS7B01G139900 chr7D 95.175 3378 108 30 392 3737 223836246 223839600 0.000000e+00 5284
6 TraesCS7B01G139900 chr7D 87.829 608 60 11 3911 4513 223839592 223840190 0.000000e+00 701
7 TraesCS7B01G139900 chr7A 95.537 3137 92 20 451 3570 234523865 234526970 0.000000e+00 4974
8 TraesCS7B01G139900 chr7A 89.306 533 51 5 3980 4512 234529064 234529590 0.000000e+00 664
9 TraesCS7B01G139900 chr7A 91.304 161 12 2 3578 3737 234527025 234527184 7.600000e-53 219
10 TraesCS7B01G139900 chr7A 94.667 75 4 0 3911 3985 234527176 234527250 2.850000e-22 117
11 TraesCS7B01G139900 chr4B 96.409 362 12 1 1 361 285626516 285626877 3.010000e-166 595
12 TraesCS7B01G139900 chr4B 93.243 74 4 1 293 365 341138242 341138169 1.720000e-19 108
13 TraesCS7B01G139900 chr3D 89.041 365 35 5 2 363 425160068 425159706 8.910000e-122 448
14 TraesCS7B01G139900 chr3A 88.315 368 37 5 2 365 399115862 399116227 1.930000e-118 436
15 TraesCS7B01G139900 chr4D 88.430 363 37 5 2 361 472156203 472155843 2.490000e-117 433
16 TraesCS7B01G139900 chr2D 87.637 364 39 6 2 362 342078397 342078037 6.980000e-113 418
17 TraesCS7B01G139900 chr2A 85.753 365 45 7 2 362 438735640 438735279 3.290000e-101 379
18 TraesCS7B01G139900 chr2B 83.380 361 54 6 6 364 462902081 462902437 3.370000e-86 329
19 TraesCS7B01G139900 chr2B 94.382 178 10 0 3739 3916 377538827 377539004 1.600000e-69 274
20 TraesCS7B01G139900 chr6B 93.048 187 12 1 3736 3922 19921083 19921268 5.750000e-69 272
21 TraesCS7B01G139900 chr6B 92.593 189 13 1 3739 3927 525106413 525106226 2.070000e-68 270
22 TraesCS7B01G139900 chr6B 91.623 191 16 0 3730 3920 695088614 695088424 9.630000e-67 265
23 TraesCS7B01G139900 chr1B 91.795 195 14 2 3730 3923 25246240 25246047 2.070000e-68 270
24 TraesCS7B01G139900 chr5B 91.045 201 15 3 3722 3921 40414641 40414839 7.440000e-68 268
25 TraesCS7B01G139900 chr5B 93.407 182 11 1 3730 3910 309813840 309814021 7.440000e-68 268


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G139900 chr7B 176240005 176244517 4512 True 8335.0 8335 100.0000 1 4513 1 chr7B.!!$R1 4512
1 TraesCS7B01G139900 chr7D 223836246 223840190 3944 False 2992.5 5284 91.5020 392 4513 2 chr7D.!!$F1 4121
2 TraesCS7B01G139900 chr7A 234523865 234529590 5725 False 1493.5 4974 92.7035 451 4512 4 chr7A.!!$F1 4061

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
91 92 0.038599 TGTGATGCTCATTGCCTGGT 59.961 50.0 0.00 0.00 42.00 4.00 F
93 94 0.038599 TGATGCTCATTGCCTGGTGT 59.961 50.0 0.00 0.00 42.00 4.16 F
141 142 0.106569 TTGGTAGGGCTGGCATCATG 60.107 55.0 2.88 0.00 0.00 3.07 F
180 181 0.108424 AGTGCATCCTCAGAGAACGC 60.108 55.0 0.00 0.00 0.00 4.84 F
253 254 0.179045 CCTTAGGTGGCCATCGAAGG 60.179 60.0 34.84 34.84 0.00 3.46 F
281 282 0.370273 GCGGACGCTTATGTGAAGTG 59.630 55.0 9.76 0.00 38.26 3.16 F
286 287 0.370273 CGCTTATGTGAAGTGGACGC 59.630 55.0 0.00 0.00 0.00 5.19 F
425 426 0.391395 GAGCTGCATGCAGAGTGACT 60.391 55.0 44.02 31.83 46.30 3.41 F
746 765 0.457851 CACGCTCCCGAATTCTCTCT 59.542 55.0 3.52 0.00 38.29 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 1830 0.883833 ATCCACCGCAAAGCTTCTTG 59.116 50.000 0.00 0.00 0.00 3.02 R
2088 2107 1.296392 CCAGCACACCGAGGATTGA 59.704 57.895 0.00 0.00 0.00 2.57 R
2771 2790 2.741092 GACTTGAGGTGGCCGTGA 59.259 61.111 0.00 0.00 0.00 4.35 R
3104 3123 1.975407 GTCGAACCTGAGGTCCGGA 60.975 63.158 11.15 0.00 33.12 5.14 R
3227 3246 1.227497 GGCCTTGAGCTCCTCGATG 60.227 63.158 12.15 0.00 43.05 3.84 R
3404 3434 0.160813 CATGTACGTGCGTGTCACAC 59.839 55.000 16.69 0.00 45.92 3.82 R
3405 3435 0.941936 CCATGTACGTGCGTGTCACA 60.942 55.000 21.95 6.33 45.92 3.58 R
3413 3443 0.378257 CATTGGCTCCATGTACGTGC 59.622 55.000 9.72 0.00 0.00 5.34 R
3812 3888 0.038618 TCAGCACACACGCGTCTTAT 60.039 50.000 9.86 0.00 36.85 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.419793 TCCTCTGCAAGTTTGGTGG 57.580 52.632 0.00 0.00 33.76 4.61
19 20 0.843309 TCCTCTGCAAGTTTGGTGGA 59.157 50.000 0.00 0.00 33.76 4.02
20 21 1.425066 TCCTCTGCAAGTTTGGTGGAT 59.575 47.619 0.00 0.00 33.76 3.41
21 22 1.542915 CCTCTGCAAGTTTGGTGGATG 59.457 52.381 0.00 0.00 33.76 3.51
22 23 2.507484 CTCTGCAAGTTTGGTGGATGA 58.493 47.619 0.00 0.00 33.76 2.92
23 24 2.486982 CTCTGCAAGTTTGGTGGATGAG 59.513 50.000 0.00 0.00 33.76 2.90
24 25 2.106338 TCTGCAAGTTTGGTGGATGAGA 59.894 45.455 0.00 0.00 33.76 3.27
25 26 2.486982 CTGCAAGTTTGGTGGATGAGAG 59.513 50.000 0.00 0.00 0.00 3.20
26 27 1.200948 GCAAGTTTGGTGGATGAGAGC 59.799 52.381 0.00 0.00 0.00 4.09
27 28 1.815003 CAAGTTTGGTGGATGAGAGCC 59.185 52.381 0.00 0.00 0.00 4.70
28 29 1.067295 AGTTTGGTGGATGAGAGCCA 58.933 50.000 0.00 0.00 0.00 4.75
29 30 1.004044 AGTTTGGTGGATGAGAGCCAG 59.996 52.381 0.00 0.00 35.77 4.85
30 31 0.329261 TTTGGTGGATGAGAGCCAGG 59.671 55.000 0.00 0.00 35.77 4.45
31 32 0.547471 TTGGTGGATGAGAGCCAGGA 60.547 55.000 0.00 0.00 35.77 3.86
32 33 0.547471 TGGTGGATGAGAGCCAGGAA 60.547 55.000 0.00 0.00 35.77 3.36
33 34 0.179936 GGTGGATGAGAGCCAGGAAG 59.820 60.000 0.00 0.00 35.77 3.46
34 35 0.179936 GTGGATGAGAGCCAGGAAGG 59.820 60.000 0.00 0.00 35.77 3.46
50 51 2.045926 GGCAGTGCCGAAGACCAT 60.046 61.111 20.55 0.00 39.62 3.55
51 52 2.401766 GGCAGTGCCGAAGACCATG 61.402 63.158 20.55 0.00 39.62 3.66
52 53 3.044059 GCAGTGCCGAAGACCATGC 62.044 63.158 2.85 0.00 0.00 4.06
53 54 2.434884 AGTGCCGAAGACCATGCG 60.435 61.111 0.00 0.00 0.00 4.73
58 59 3.799753 CGAAGACCATGCGGAAGG 58.200 61.111 0.00 0.00 35.59 3.46
59 60 1.218047 CGAAGACCATGCGGAAGGA 59.782 57.895 4.81 0.00 35.59 3.36
60 61 1.084370 CGAAGACCATGCGGAAGGAC 61.084 60.000 4.81 0.00 35.59 3.85
61 62 0.250513 GAAGACCATGCGGAAGGACT 59.749 55.000 4.81 0.28 35.59 3.85
62 63 0.693049 AAGACCATGCGGAAGGACTT 59.307 50.000 9.79 9.79 35.57 3.01
63 64 0.693049 AGACCATGCGGAAGGACTTT 59.307 50.000 4.81 0.00 35.59 2.66
64 65 0.804989 GACCATGCGGAAGGACTTTG 59.195 55.000 4.81 0.00 35.59 2.77
65 66 0.400213 ACCATGCGGAAGGACTTTGA 59.600 50.000 4.81 0.00 35.59 2.69
66 67 1.004745 ACCATGCGGAAGGACTTTGAT 59.995 47.619 4.81 0.00 35.59 2.57
67 68 2.094675 CCATGCGGAAGGACTTTGATT 58.905 47.619 0.00 0.00 0.00 2.57
68 69 2.098117 CCATGCGGAAGGACTTTGATTC 59.902 50.000 0.00 0.00 0.00 2.52
69 70 2.559698 TGCGGAAGGACTTTGATTCA 57.440 45.000 0.00 0.00 0.00 2.57
70 71 3.071874 TGCGGAAGGACTTTGATTCAT 57.928 42.857 0.00 0.00 0.00 2.57
71 72 3.420893 TGCGGAAGGACTTTGATTCATT 58.579 40.909 0.00 0.00 0.00 2.57
72 73 3.826157 TGCGGAAGGACTTTGATTCATTT 59.174 39.130 0.00 0.00 0.00 2.32
73 74 4.168760 GCGGAAGGACTTTGATTCATTTG 58.831 43.478 0.00 0.00 0.00 2.32
74 75 4.321230 GCGGAAGGACTTTGATTCATTTGT 60.321 41.667 0.00 0.00 0.00 2.83
75 76 5.156355 CGGAAGGACTTTGATTCATTTGTG 58.844 41.667 0.00 0.00 0.00 3.33
76 77 5.048782 CGGAAGGACTTTGATTCATTTGTGA 60.049 40.000 0.00 0.00 0.00 3.58
77 78 6.349611 CGGAAGGACTTTGATTCATTTGTGAT 60.350 38.462 0.00 0.00 0.00 3.06
78 79 6.810182 GGAAGGACTTTGATTCATTTGTGATG 59.190 38.462 0.00 0.00 0.00 3.07
79 80 5.717119 AGGACTTTGATTCATTTGTGATGC 58.283 37.500 0.00 0.00 0.00 3.91
80 81 5.479375 AGGACTTTGATTCATTTGTGATGCT 59.521 36.000 0.00 0.00 0.00 3.79
81 82 5.803967 GGACTTTGATTCATTTGTGATGCTC 59.196 40.000 0.00 0.00 0.00 4.26
82 83 6.335471 ACTTTGATTCATTTGTGATGCTCA 57.665 33.333 0.00 0.00 0.00 4.26
83 84 6.931838 ACTTTGATTCATTTGTGATGCTCAT 58.068 32.000 0.00 0.00 0.00 2.90
84 85 7.383687 ACTTTGATTCATTTGTGATGCTCATT 58.616 30.769 0.00 0.00 0.00 2.57
85 86 7.330946 ACTTTGATTCATTTGTGATGCTCATTG 59.669 33.333 0.00 0.00 0.00 2.82
86 87 5.106442 TGATTCATTTGTGATGCTCATTGC 58.894 37.500 0.00 0.00 43.25 3.56
87 88 3.513680 TCATTTGTGATGCTCATTGCC 57.486 42.857 0.00 0.00 42.00 4.52
88 89 3.093814 TCATTTGTGATGCTCATTGCCT 58.906 40.909 0.00 0.00 42.00 4.75
89 90 3.119280 TCATTTGTGATGCTCATTGCCTG 60.119 43.478 0.00 0.00 42.00 4.85
90 91 1.179152 TTGTGATGCTCATTGCCTGG 58.821 50.000 0.00 0.00 42.00 4.45
91 92 0.038599 TGTGATGCTCATTGCCTGGT 59.961 50.000 0.00 0.00 42.00 4.00
92 93 0.454600 GTGATGCTCATTGCCTGGTG 59.545 55.000 0.00 0.00 42.00 4.17
93 94 0.038599 TGATGCTCATTGCCTGGTGT 59.961 50.000 0.00 0.00 42.00 4.16
94 95 1.180029 GATGCTCATTGCCTGGTGTT 58.820 50.000 0.00 0.00 42.00 3.32
95 96 1.547372 GATGCTCATTGCCTGGTGTTT 59.453 47.619 0.00 0.00 42.00 2.83
96 97 2.284754 TGCTCATTGCCTGGTGTTTA 57.715 45.000 0.00 0.00 42.00 2.01
97 98 2.806434 TGCTCATTGCCTGGTGTTTAT 58.194 42.857 0.00 0.00 42.00 1.40
98 99 2.492881 TGCTCATTGCCTGGTGTTTATG 59.507 45.455 0.00 0.00 42.00 1.90
99 100 2.159198 GCTCATTGCCTGGTGTTTATGG 60.159 50.000 0.00 0.00 35.15 2.74
100 101 3.355378 CTCATTGCCTGGTGTTTATGGA 58.645 45.455 0.00 0.00 0.00 3.41
101 102 3.763360 CTCATTGCCTGGTGTTTATGGAA 59.237 43.478 0.00 0.00 0.00 3.53
102 103 4.155709 TCATTGCCTGGTGTTTATGGAAA 58.844 39.130 0.00 0.00 0.00 3.13
103 104 4.021544 TCATTGCCTGGTGTTTATGGAAAC 60.022 41.667 0.00 0.00 44.48 2.78
122 123 8.934023 TGGAAACAAAGGAACAATAGAGTATT 57.066 30.769 0.00 0.00 37.44 1.89
123 124 9.362151 TGGAAACAAAGGAACAATAGAGTATTT 57.638 29.630 0.00 0.00 37.44 1.40
124 125 9.626045 GGAAACAAAGGAACAATAGAGTATTTG 57.374 33.333 0.00 0.00 33.70 2.32
125 126 9.626045 GAAACAAAGGAACAATAGAGTATTTGG 57.374 33.333 0.00 0.00 32.19 3.28
126 127 8.706322 AACAAAGGAACAATAGAGTATTTGGT 57.294 30.769 0.00 0.00 32.19 3.67
127 128 9.802039 AACAAAGGAACAATAGAGTATTTGGTA 57.198 29.630 0.00 0.00 32.19 3.25
128 129 9.449719 ACAAAGGAACAATAGAGTATTTGGTAG 57.550 33.333 0.00 0.00 32.19 3.18
129 130 8.893727 CAAAGGAACAATAGAGTATTTGGTAGG 58.106 37.037 0.00 0.00 0.00 3.18
130 131 7.138054 AGGAACAATAGAGTATTTGGTAGGG 57.862 40.000 0.00 0.00 0.00 3.53
131 132 5.763698 GGAACAATAGAGTATTTGGTAGGGC 59.236 44.000 0.00 0.00 0.00 5.19
132 133 6.409349 GGAACAATAGAGTATTTGGTAGGGCT 60.409 42.308 0.00 0.00 0.00 5.19
133 134 5.930135 ACAATAGAGTATTTGGTAGGGCTG 58.070 41.667 0.00 0.00 0.00 4.85
134 135 5.163195 ACAATAGAGTATTTGGTAGGGCTGG 60.163 44.000 0.00 0.00 0.00 4.85
135 136 1.490910 AGAGTATTTGGTAGGGCTGGC 59.509 52.381 0.00 0.00 0.00 4.85
136 137 1.211949 GAGTATTTGGTAGGGCTGGCA 59.788 52.381 2.88 0.00 0.00 4.92
137 138 1.852965 AGTATTTGGTAGGGCTGGCAT 59.147 47.619 2.88 0.00 0.00 4.40
138 139 2.158608 AGTATTTGGTAGGGCTGGCATC 60.159 50.000 2.88 0.00 0.00 3.91
139 140 0.630673 ATTTGGTAGGGCTGGCATCA 59.369 50.000 2.88 0.00 0.00 3.07
140 141 0.630673 TTTGGTAGGGCTGGCATCAT 59.369 50.000 2.88 0.00 0.00 2.45
141 142 0.106569 TTGGTAGGGCTGGCATCATG 60.107 55.000 2.88 0.00 0.00 3.07
142 143 0.987613 TGGTAGGGCTGGCATCATGA 60.988 55.000 0.00 0.00 0.00 3.07
143 144 0.183492 GGTAGGGCTGGCATCATGAA 59.817 55.000 0.00 0.00 0.00 2.57
144 145 1.202976 GGTAGGGCTGGCATCATGAAT 60.203 52.381 0.00 0.00 0.00 2.57
145 146 1.884579 GTAGGGCTGGCATCATGAATG 59.115 52.381 0.00 0.00 38.50 2.67
146 147 0.554305 AGGGCTGGCATCATGAATGA 59.446 50.000 0.00 0.00 41.70 2.57
147 148 0.959553 GGGCTGGCATCATGAATGAG 59.040 55.000 0.00 0.00 40.64 2.90
148 149 0.314302 GGCTGGCATCATGAATGAGC 59.686 55.000 0.00 5.20 40.64 4.26
149 150 1.319541 GCTGGCATCATGAATGAGCT 58.680 50.000 0.00 0.00 40.64 4.09
150 151 2.501261 GCTGGCATCATGAATGAGCTA 58.499 47.619 0.00 0.00 40.64 3.32
151 152 2.484651 GCTGGCATCATGAATGAGCTAG 59.515 50.000 16.37 16.37 40.64 3.42
152 153 3.075148 CTGGCATCATGAATGAGCTAGG 58.925 50.000 0.00 0.00 40.64 3.02
153 154 2.440627 TGGCATCATGAATGAGCTAGGT 59.559 45.455 0.00 0.00 40.64 3.08
154 155 3.647590 TGGCATCATGAATGAGCTAGGTA 59.352 43.478 0.00 0.00 40.64 3.08
155 156 3.999663 GGCATCATGAATGAGCTAGGTAC 59.000 47.826 0.00 0.00 40.64 3.34
156 157 4.262808 GGCATCATGAATGAGCTAGGTACT 60.263 45.833 0.00 0.00 40.64 2.73
157 158 5.047021 GGCATCATGAATGAGCTAGGTACTA 60.047 44.000 0.00 0.00 40.64 1.82
158 159 6.351711 GGCATCATGAATGAGCTAGGTACTAT 60.352 42.308 0.00 0.00 39.43 2.12
159 160 6.534436 GCATCATGAATGAGCTAGGTACTATG 59.466 42.308 0.00 0.00 39.43 2.23
160 161 6.596309 TCATGAATGAGCTAGGTACTATGG 57.404 41.667 0.00 0.00 34.51 2.74
161 162 6.314917 TCATGAATGAGCTAGGTACTATGGA 58.685 40.000 0.00 0.00 34.51 3.41
162 163 6.435591 TCATGAATGAGCTAGGTACTATGGAG 59.564 42.308 0.00 0.00 34.51 3.86
163 164 5.706447 TGAATGAGCTAGGTACTATGGAGT 58.294 41.667 0.00 0.00 41.70 3.85
164 165 5.536538 TGAATGAGCTAGGTACTATGGAGTG 59.463 44.000 0.00 0.00 41.70 3.51
165 166 3.223435 TGAGCTAGGTACTATGGAGTGC 58.777 50.000 0.00 0.00 41.70 4.40
166 167 3.223435 GAGCTAGGTACTATGGAGTGCA 58.777 50.000 0.00 0.00 41.70 4.57
167 168 3.829601 GAGCTAGGTACTATGGAGTGCAT 59.170 47.826 1.66 1.66 41.70 3.96
168 169 3.829601 AGCTAGGTACTATGGAGTGCATC 59.170 47.826 0.00 0.00 41.70 3.91
169 170 3.056465 GCTAGGTACTATGGAGTGCATCC 60.056 52.174 0.00 7.90 44.83 3.51
170 171 3.336509 AGGTACTATGGAGTGCATCCT 57.663 47.619 0.00 0.00 43.95 3.24
171 172 3.235200 AGGTACTATGGAGTGCATCCTC 58.765 50.000 0.00 6.31 43.95 3.71
172 173 3.374208 AGGTACTATGGAGTGCATCCTCA 60.374 47.826 0.00 1.64 43.95 3.86
173 174 5.237882 AGGTACTATGGAGTGCATCCTCAG 61.238 50.000 0.00 12.51 43.95 3.35
174 175 7.411954 AGGTACTATGGAGTGCATCCTCAGA 62.412 48.000 0.00 0.00 43.95 3.27
175 176 9.808869 TAGGTACTATGGAGTGCATCCTCAGAG 62.809 48.148 0.00 8.75 44.86 3.35
178 179 2.307934 GGAGTGCATCCTCAGAGAAC 57.692 55.000 0.00 0.00 45.64 3.01
179 180 1.470632 GGAGTGCATCCTCAGAGAACG 60.471 57.143 0.00 0.00 45.64 3.95
180 181 0.108424 AGTGCATCCTCAGAGAACGC 60.108 55.000 0.00 0.00 0.00 4.84
181 182 0.390340 GTGCATCCTCAGAGAACGCA 60.390 55.000 0.00 1.18 0.00 5.24
182 183 0.321346 TGCATCCTCAGAGAACGCAA 59.679 50.000 0.00 0.00 0.00 4.85
183 184 1.270785 TGCATCCTCAGAGAACGCAAA 60.271 47.619 0.00 0.00 0.00 3.68
184 185 1.129437 GCATCCTCAGAGAACGCAAAC 59.871 52.381 0.00 0.00 0.00 2.93
185 186 2.693069 CATCCTCAGAGAACGCAAACT 58.307 47.619 0.00 0.00 0.00 2.66
186 187 2.154854 TCCTCAGAGAACGCAAACTG 57.845 50.000 0.00 0.00 0.00 3.16
187 188 1.412710 TCCTCAGAGAACGCAAACTGT 59.587 47.619 0.00 0.00 0.00 3.55
188 189 1.528586 CCTCAGAGAACGCAAACTGTG 59.471 52.381 0.00 0.00 0.00 3.66
189 190 1.528586 CTCAGAGAACGCAAACTGTGG 59.471 52.381 0.00 0.00 30.87 4.17
190 191 0.588252 CAGAGAACGCAAACTGTGGG 59.412 55.000 0.00 0.00 45.54 4.61
191 192 0.468226 AGAGAACGCAAACTGTGGGA 59.532 50.000 0.00 0.00 42.76 4.37
192 193 0.868406 GAGAACGCAAACTGTGGGAG 59.132 55.000 0.00 0.00 42.76 4.30
193 194 0.180406 AGAACGCAAACTGTGGGAGT 59.820 50.000 0.00 0.00 42.76 3.85
195 196 2.158871 AGAACGCAAACTGTGGGAGTTA 60.159 45.455 0.00 0.00 44.68 2.24
196 197 1.878953 ACGCAAACTGTGGGAGTTAG 58.121 50.000 0.00 0.00 44.68 2.34
197 198 0.517316 CGCAAACTGTGGGAGTTAGC 59.483 55.000 0.00 0.00 44.68 3.09
198 199 0.881796 GCAAACTGTGGGAGTTAGCC 59.118 55.000 0.00 0.00 44.68 3.93
199 200 1.817740 GCAAACTGTGGGAGTTAGCCA 60.818 52.381 0.00 0.00 44.68 4.75
200 201 2.154462 CAAACTGTGGGAGTTAGCCAG 58.846 52.381 0.00 0.00 44.68 4.85
201 202 1.435256 AACTGTGGGAGTTAGCCAGT 58.565 50.000 0.00 0.00 43.54 4.00
202 203 2.320681 ACTGTGGGAGTTAGCCAGTA 57.679 50.000 0.00 0.00 34.77 2.74
203 204 2.180276 ACTGTGGGAGTTAGCCAGTAG 58.820 52.381 0.00 0.00 34.77 2.57
204 205 2.225293 ACTGTGGGAGTTAGCCAGTAGA 60.225 50.000 0.00 0.00 34.77 2.59
205 206 2.832129 CTGTGGGAGTTAGCCAGTAGAA 59.168 50.000 0.00 0.00 0.00 2.10
206 207 2.832129 TGTGGGAGTTAGCCAGTAGAAG 59.168 50.000 0.00 0.00 0.00 2.85
207 208 2.832733 GTGGGAGTTAGCCAGTAGAAGT 59.167 50.000 0.00 0.00 0.00 3.01
208 209 2.832129 TGGGAGTTAGCCAGTAGAAGTG 59.168 50.000 0.00 0.00 0.00 3.16
209 210 3.097614 GGGAGTTAGCCAGTAGAAGTGA 58.902 50.000 0.00 0.00 0.00 3.41
210 211 3.514309 GGGAGTTAGCCAGTAGAAGTGAA 59.486 47.826 0.00 0.00 0.00 3.18
211 212 4.382147 GGGAGTTAGCCAGTAGAAGTGAAG 60.382 50.000 0.00 0.00 0.00 3.02
212 213 4.221041 GGAGTTAGCCAGTAGAAGTGAAGT 59.779 45.833 0.00 0.00 0.00 3.01
213 214 5.140747 AGTTAGCCAGTAGAAGTGAAGTG 57.859 43.478 0.00 0.00 0.00 3.16
214 215 4.589374 AGTTAGCCAGTAGAAGTGAAGTGT 59.411 41.667 0.00 0.00 0.00 3.55
215 216 5.070580 AGTTAGCCAGTAGAAGTGAAGTGTT 59.929 40.000 0.00 0.00 0.00 3.32
216 217 6.267014 AGTTAGCCAGTAGAAGTGAAGTGTTA 59.733 38.462 0.00 0.00 0.00 2.41
217 218 4.884247 AGCCAGTAGAAGTGAAGTGTTAC 58.116 43.478 0.00 0.00 0.00 2.50
218 219 4.344102 AGCCAGTAGAAGTGAAGTGTTACA 59.656 41.667 0.00 0.00 0.00 2.41
219 220 5.012148 AGCCAGTAGAAGTGAAGTGTTACAT 59.988 40.000 0.00 0.00 0.00 2.29
220 221 5.701290 GCCAGTAGAAGTGAAGTGTTACATT 59.299 40.000 0.00 0.00 0.00 2.71
221 222 6.204882 GCCAGTAGAAGTGAAGTGTTACATTT 59.795 38.462 0.00 0.00 0.00 2.32
222 223 7.255139 GCCAGTAGAAGTGAAGTGTTACATTTT 60.255 37.037 0.00 0.00 0.00 1.82
223 224 8.621286 CCAGTAGAAGTGAAGTGTTACATTTTT 58.379 33.333 0.00 0.00 0.00 1.94
224 225 9.438291 CAGTAGAAGTGAAGTGTTACATTTTTG 57.562 33.333 0.00 0.00 0.00 2.44
225 226 9.174166 AGTAGAAGTGAAGTGTTACATTTTTGT 57.826 29.630 0.00 0.00 0.00 2.83
226 227 9.221775 GTAGAAGTGAAGTGTTACATTTTTGTG 57.778 33.333 0.00 0.00 0.00 3.33
227 228 8.050778 AGAAGTGAAGTGTTACATTTTTGTGA 57.949 30.769 0.00 0.00 0.00 3.58
228 229 8.184192 AGAAGTGAAGTGTTACATTTTTGTGAG 58.816 33.333 0.00 0.00 0.00 3.51
229 230 7.391148 AGTGAAGTGTTACATTTTTGTGAGT 57.609 32.000 0.00 0.00 0.00 3.41
230 231 8.500753 AGTGAAGTGTTACATTTTTGTGAGTA 57.499 30.769 0.00 0.00 0.00 2.59
231 232 8.612619 AGTGAAGTGTTACATTTTTGTGAGTAG 58.387 33.333 0.00 0.00 0.00 2.57
232 233 8.395633 GTGAAGTGTTACATTTTTGTGAGTAGT 58.604 33.333 0.00 0.00 0.00 2.73
233 234 8.952278 TGAAGTGTTACATTTTTGTGAGTAGTT 58.048 29.630 0.00 0.00 0.00 2.24
234 235 9.434559 GAAGTGTTACATTTTTGTGAGTAGTTC 57.565 33.333 0.00 0.00 0.00 3.01
235 236 7.927048 AGTGTTACATTTTTGTGAGTAGTTCC 58.073 34.615 0.00 0.00 0.00 3.62
236 237 7.773690 AGTGTTACATTTTTGTGAGTAGTTCCT 59.226 33.333 0.00 0.00 0.00 3.36
237 238 8.403236 GTGTTACATTTTTGTGAGTAGTTCCTT 58.597 33.333 0.00 0.00 0.00 3.36
238 239 9.616156 TGTTACATTTTTGTGAGTAGTTCCTTA 57.384 29.630 0.00 0.00 0.00 2.69
240 241 7.745620 ACATTTTTGTGAGTAGTTCCTTAGG 57.254 36.000 0.00 0.00 0.00 2.69
241 242 7.287810 ACATTTTTGTGAGTAGTTCCTTAGGT 58.712 34.615 0.00 0.00 0.00 3.08
242 243 7.228706 ACATTTTTGTGAGTAGTTCCTTAGGTG 59.771 37.037 0.00 0.00 0.00 4.00
243 244 4.884668 TTGTGAGTAGTTCCTTAGGTGG 57.115 45.455 0.00 0.00 0.00 4.61
244 245 2.565834 TGTGAGTAGTTCCTTAGGTGGC 59.434 50.000 0.00 0.00 0.00 5.01
245 246 2.093606 GTGAGTAGTTCCTTAGGTGGCC 60.094 54.545 0.00 0.00 0.00 5.36
246 247 2.185387 GAGTAGTTCCTTAGGTGGCCA 58.815 52.381 0.00 0.00 0.00 5.36
247 248 2.772515 GAGTAGTTCCTTAGGTGGCCAT 59.227 50.000 9.72 0.00 0.00 4.40
248 249 2.772515 AGTAGTTCCTTAGGTGGCCATC 59.227 50.000 9.72 9.02 0.00 3.51
249 250 0.541863 AGTTCCTTAGGTGGCCATCG 59.458 55.000 9.72 0.00 0.00 3.84
250 251 0.539986 GTTCCTTAGGTGGCCATCGA 59.460 55.000 9.72 0.00 0.00 3.59
251 252 1.065709 GTTCCTTAGGTGGCCATCGAA 60.066 52.381 9.72 10.71 0.00 3.71
252 253 0.830648 TCCTTAGGTGGCCATCGAAG 59.169 55.000 27.00 27.00 0.00 3.79
253 254 0.179045 CCTTAGGTGGCCATCGAAGG 60.179 60.000 34.84 34.84 0.00 3.46
254 255 0.541863 CTTAGGTGGCCATCGAAGGT 59.458 55.000 26.45 5.46 0.00 3.50
255 256 0.539986 TTAGGTGGCCATCGAAGGTC 59.460 55.000 9.72 3.87 0.00 3.85
256 257 1.672854 TAGGTGGCCATCGAAGGTCG 61.673 60.000 9.72 0.00 42.10 4.79
257 258 2.511600 GTGGCCATCGAAGGTCGG 60.512 66.667 9.72 0.00 40.88 4.79
258 259 3.781307 TGGCCATCGAAGGTCGGG 61.781 66.667 0.00 0.00 40.88 5.14
259 260 3.467226 GGCCATCGAAGGTCGGGA 61.467 66.667 8.72 0.00 40.88 5.14
260 261 2.107141 GCCATCGAAGGTCGGGAG 59.893 66.667 8.72 0.00 40.88 4.30
261 262 2.815308 CCATCGAAGGTCGGGAGG 59.185 66.667 0.00 0.00 40.88 4.30
262 263 2.797278 CCATCGAAGGTCGGGAGGG 61.797 68.421 0.00 0.00 40.88 4.30
263 264 3.155167 ATCGAAGGTCGGGAGGGC 61.155 66.667 0.00 0.00 40.88 5.19
273 274 3.547513 GGGAGGGCGGACGCTTAT 61.548 66.667 16.72 2.71 39.58 1.73
274 275 2.280186 GGAGGGCGGACGCTTATG 60.280 66.667 16.72 0.00 39.58 1.90
275 276 2.499685 GAGGGCGGACGCTTATGT 59.500 61.111 16.72 0.00 39.58 2.29
276 277 1.883084 GAGGGCGGACGCTTATGTG 60.883 63.158 16.72 0.00 39.58 3.21
277 278 2.185867 GGGCGGACGCTTATGTGA 59.814 61.111 16.72 0.00 41.60 3.58
278 279 1.448893 GGGCGGACGCTTATGTGAA 60.449 57.895 16.72 0.00 41.60 3.18
279 280 1.429148 GGGCGGACGCTTATGTGAAG 61.429 60.000 16.72 0.00 41.60 3.02
280 281 0.739813 GGCGGACGCTTATGTGAAGT 60.740 55.000 16.72 0.00 41.60 3.01
281 282 0.370273 GCGGACGCTTATGTGAAGTG 59.630 55.000 9.76 0.00 38.26 3.16
282 283 0.999406 CGGACGCTTATGTGAAGTGG 59.001 55.000 3.20 0.00 32.38 4.00
283 284 1.403647 CGGACGCTTATGTGAAGTGGA 60.404 52.381 3.20 0.00 32.38 4.02
284 285 2.000447 GGACGCTTATGTGAAGTGGAC 59.000 52.381 3.20 0.00 32.38 4.02
285 286 1.654105 GACGCTTATGTGAAGTGGACG 59.346 52.381 3.20 0.00 32.38 4.79
286 287 0.370273 CGCTTATGTGAAGTGGACGC 59.630 55.000 0.00 0.00 0.00 5.19
287 288 0.727398 GCTTATGTGAAGTGGACGCC 59.273 55.000 0.00 0.00 0.00 5.68
288 289 1.943968 GCTTATGTGAAGTGGACGCCA 60.944 52.381 0.00 0.00 0.00 5.69
299 300 2.851263 TGGACGCCACTTTGTAATCT 57.149 45.000 0.00 0.00 0.00 2.40
300 301 2.695359 TGGACGCCACTTTGTAATCTC 58.305 47.619 0.00 0.00 0.00 2.75
301 302 2.301870 TGGACGCCACTTTGTAATCTCT 59.698 45.455 0.00 0.00 0.00 3.10
302 303 3.244422 TGGACGCCACTTTGTAATCTCTT 60.244 43.478 0.00 0.00 0.00 2.85
303 304 3.125316 GGACGCCACTTTGTAATCTCTTG 59.875 47.826 0.00 0.00 0.00 3.02
304 305 3.740115 ACGCCACTTTGTAATCTCTTGT 58.260 40.909 0.00 0.00 0.00 3.16
305 306 4.890088 ACGCCACTTTGTAATCTCTTGTA 58.110 39.130 0.00 0.00 0.00 2.41
306 307 5.302360 ACGCCACTTTGTAATCTCTTGTAA 58.698 37.500 0.00 0.00 0.00 2.41
307 308 5.761234 ACGCCACTTTGTAATCTCTTGTAAA 59.239 36.000 0.00 0.00 0.00 2.01
308 309 6.430000 ACGCCACTTTGTAATCTCTTGTAAAT 59.570 34.615 0.00 0.00 0.00 1.40
309 310 7.604927 ACGCCACTTTGTAATCTCTTGTAAATA 59.395 33.333 0.00 0.00 0.00 1.40
310 311 8.612619 CGCCACTTTGTAATCTCTTGTAAATAT 58.387 33.333 0.00 0.00 0.00 1.28
339 340 9.400638 CTTCATCTTCTATAAAGCTAAGGTACG 57.599 37.037 0.00 0.00 0.00 3.67
340 341 7.368833 TCATCTTCTATAAAGCTAAGGTACGC 58.631 38.462 0.00 0.00 0.00 4.42
341 342 6.081872 TCTTCTATAAAGCTAAGGTACGCC 57.918 41.667 0.00 0.00 0.00 5.68
342 343 5.595542 TCTTCTATAAAGCTAAGGTACGCCA 59.404 40.000 0.00 0.00 37.19 5.69
343 344 6.267014 TCTTCTATAAAGCTAAGGTACGCCAT 59.733 38.462 0.00 0.00 37.19 4.40
344 345 6.415206 TCTATAAAGCTAAGGTACGCCATT 57.585 37.500 0.00 0.00 37.19 3.16
345 346 6.220930 TCTATAAAGCTAAGGTACGCCATTG 58.779 40.000 0.00 0.00 37.19 2.82
346 347 2.038387 AAGCTAAGGTACGCCATTGG 57.962 50.000 0.00 0.00 37.19 3.16
347 348 0.463833 AGCTAAGGTACGCCATTGGC 60.464 55.000 18.10 18.10 46.75 4.52
356 357 2.747460 GCCATTGGCGTGCTCTGA 60.747 61.111 12.82 0.00 39.62 3.27
357 358 2.334946 GCCATTGGCGTGCTCTGAA 61.335 57.895 12.82 0.00 39.62 3.02
358 359 1.865788 GCCATTGGCGTGCTCTGAAA 61.866 55.000 12.82 0.00 39.62 2.69
359 360 0.597568 CCATTGGCGTGCTCTGAAAA 59.402 50.000 0.00 0.00 0.00 2.29
360 361 1.000385 CCATTGGCGTGCTCTGAAAAA 60.000 47.619 0.00 0.00 0.00 1.94
383 384 4.005032 GCTAGCTAGCTCACGCAC 57.995 61.111 33.71 6.73 45.62 5.34
384 385 1.941734 GCTAGCTAGCTCACGCACG 60.942 63.158 33.71 1.74 45.62 5.34
385 386 1.298713 CTAGCTAGCTCACGCACGG 60.299 63.158 23.26 0.00 39.10 4.94
386 387 1.715862 CTAGCTAGCTCACGCACGGA 61.716 60.000 23.26 0.00 39.10 4.69
387 388 1.715862 TAGCTAGCTCACGCACGGAG 61.716 60.000 23.26 0.00 39.10 4.63
388 389 2.103143 CTAGCTCACGCACGGAGG 59.897 66.667 0.00 0.00 39.10 4.30
389 390 4.129737 TAGCTCACGCACGGAGGC 62.130 66.667 0.00 3.82 39.10 4.70
418 419 2.745100 ACCACGAGCTGCATGCAG 60.745 61.111 37.81 37.81 45.94 4.41
421 422 1.740664 CACGAGCTGCATGCAGAGT 60.741 57.895 44.02 34.50 46.30 3.24
422 423 1.740664 ACGAGCTGCATGCAGAGTG 60.741 57.895 44.02 32.67 46.30 3.51
424 425 1.694018 CGAGCTGCATGCAGAGTGAC 61.694 60.000 44.02 28.17 46.30 3.67
425 426 0.391395 GAGCTGCATGCAGAGTGACT 60.391 55.000 44.02 31.83 46.30 3.41
426 427 0.673956 AGCTGCATGCAGAGTGACTG 60.674 55.000 44.02 21.49 46.30 3.51
454 457 3.316029 CAGCCAACTCACAAATTCAGTCA 59.684 43.478 0.00 0.00 0.00 3.41
496 499 5.188751 AGTCAGTCCCAATTTCTAGAGGAAG 59.811 44.000 0.00 0.00 35.16 3.46
518 521 2.192608 CTGCCAAGAAGGTTGCTCGC 62.193 60.000 0.00 0.00 40.61 5.03
574 587 3.799281 TTTGGCCTTGAAGAGTGTTTG 57.201 42.857 3.32 0.00 0.00 2.93
579 592 3.255642 GGCCTTGAAGAGTGTTTGCATAA 59.744 43.478 0.00 0.00 0.00 1.90
580 593 4.479619 GCCTTGAAGAGTGTTTGCATAAG 58.520 43.478 0.00 0.00 0.00 1.73
581 594 4.479619 CCTTGAAGAGTGTTTGCATAAGC 58.520 43.478 0.00 0.00 42.57 3.09
582 595 4.217118 CCTTGAAGAGTGTTTGCATAAGCT 59.783 41.667 0.00 0.00 42.74 3.74
583 596 5.278660 CCTTGAAGAGTGTTTGCATAAGCTT 60.279 40.000 3.48 3.48 42.74 3.74
584 597 5.112220 TGAAGAGTGTTTGCATAAGCTTG 57.888 39.130 9.86 0.00 42.74 4.01
585 598 4.821260 TGAAGAGTGTTTGCATAAGCTTGA 59.179 37.500 9.86 0.00 42.74 3.02
586 599 5.474532 TGAAGAGTGTTTGCATAAGCTTGAT 59.525 36.000 9.86 0.00 42.74 2.57
587 600 5.972107 AGAGTGTTTGCATAAGCTTGATT 57.028 34.783 9.86 0.00 42.74 2.57
588 601 6.336842 AGAGTGTTTGCATAAGCTTGATTT 57.663 33.333 9.86 0.00 42.74 2.17
605 618 6.560253 TTGATTTGGCTAGAAAGACTTGAC 57.440 37.500 0.00 0.00 0.00 3.18
608 621 6.205464 TGATTTGGCTAGAAAGACTTGACTTG 59.795 38.462 0.00 0.00 30.92 3.16
646 665 2.789917 CGCATGCAGAGACCTTGC 59.210 61.111 19.57 0.00 0.00 4.01
712 731 1.251527 TTCTCTCTCTCGCCACCACC 61.252 60.000 0.00 0.00 0.00 4.61
723 742 3.966543 CACCACCCTCCCACCCAC 61.967 72.222 0.00 0.00 0.00 4.61
724 743 4.525028 ACCACCCTCCCACCCACA 62.525 66.667 0.00 0.00 0.00 4.17
746 765 0.457851 CACGCTCCCGAATTCTCTCT 59.542 55.000 3.52 0.00 38.29 3.10
1167 1186 2.434185 GGCATCAAGGACGACGCA 60.434 61.111 0.00 0.00 0.00 5.24
1397 1416 4.052229 CGTGAACGAGCTCCCCGT 62.052 66.667 8.47 0.00 43.02 5.28
1612 1631 1.448717 GAGCTCCCGCAGAAGGAAC 60.449 63.158 0.87 0.00 39.10 3.62
1733 1752 1.078708 CACATTACCGGACGGCCTT 60.079 57.895 9.46 0.00 39.32 4.35
1756 1775 2.477176 GGTTGGTGCTGCAACGTCA 61.477 57.895 13.71 2.86 32.50 4.35
1793 1812 2.092968 TGTATGTCTGGCCCTGACATTC 60.093 50.000 32.68 28.17 45.87 2.67
1811 1830 2.281484 TCCTTCGGTGCAGGCAAC 60.281 61.111 0.00 0.00 0.00 4.17
2009 2028 1.595929 GGCAGACAAAACGACGGGA 60.596 57.895 0.00 0.00 0.00 5.14
2088 2107 3.379445 CCTACGGCGTCCTGGTGT 61.379 66.667 19.21 0.00 0.00 4.16
2099 2118 0.544357 TCCTGGTGTCAATCCTCGGT 60.544 55.000 0.00 0.00 0.00 4.69
2771 2790 4.457496 CCGATGCTGACGGTGCCT 62.457 66.667 0.00 0.00 44.57 4.75
2789 2808 2.738521 CACGGCCACCTCAAGTCG 60.739 66.667 2.24 0.00 0.00 4.18
3104 3123 4.473520 CTGCGGAAGGTGGCGGAT 62.474 66.667 0.00 0.00 37.75 4.18
3227 3246 4.699522 AAGGACGCGGTGAAGGGC 62.700 66.667 12.47 0.00 0.00 5.19
3250 3269 1.303970 AGGAGCTCAAGGCCAAAGC 60.304 57.895 17.19 10.95 43.05 3.51
3403 3433 1.003718 ACCCAACTAAGCACGCTCC 60.004 57.895 0.00 0.00 0.00 4.70
3404 3434 2.100631 CCCAACTAAGCACGCTCCG 61.101 63.158 0.00 0.00 0.00 4.63
3405 3435 1.374252 CCAACTAAGCACGCTCCGT 60.374 57.895 0.00 0.00 42.36 4.69
3431 3461 1.089481 CGCACGTACATGGAGCCAAT 61.089 55.000 0.00 0.00 0.00 3.16
3432 3462 0.378257 GCACGTACATGGAGCCAATG 59.622 55.000 0.00 0.00 0.00 2.82
3449 3479 4.526970 CCAATGCTAAACATGGACCTAGT 58.473 43.478 0.00 0.00 39.60 2.57
3594 3669 6.127925 GCTAATTGGTGTTCATCTGATGTTCA 60.128 38.462 16.66 13.50 0.00 3.18
3598 3673 4.939439 TGGTGTTCATCTGATGTTCATCTG 59.061 41.667 16.66 12.25 0.00 2.90
3631 3706 7.166691 AGGGATTCAGAATTTCAGAACATTG 57.833 36.000 6.40 0.00 0.00 2.82
3655 3730 6.603997 TGTTGGGTTGTGTTTTAGTACAGATT 59.396 34.615 0.00 0.00 0.00 2.40
3689 3764 5.041191 TGCAAAATTTAGGGCCTTTTGAA 57.959 34.783 25.38 16.32 40.58 2.69
3730 3806 1.873486 GCCAGCAGGAAAAACGCAAAT 60.873 47.619 0.00 0.00 36.89 2.32
3731 3807 2.609244 GCCAGCAGGAAAAACGCAAATA 60.609 45.455 0.00 0.00 36.89 1.40
3732 3808 3.848726 CCAGCAGGAAAAACGCAAATAT 58.151 40.909 0.00 0.00 36.89 1.28
3733 3809 4.244862 CCAGCAGGAAAAACGCAAATATT 58.755 39.130 0.00 0.00 36.89 1.28
3734 3810 4.091800 CCAGCAGGAAAAACGCAAATATTG 59.908 41.667 0.00 0.00 36.89 1.90
3735 3811 4.922692 CAGCAGGAAAAACGCAAATATTGA 59.077 37.500 0.00 0.00 0.00 2.57
3736 3812 5.404968 CAGCAGGAAAAACGCAAATATTGAA 59.595 36.000 0.00 0.00 0.00 2.69
3737 3813 6.091169 CAGCAGGAAAAACGCAAATATTGAAT 59.909 34.615 0.00 0.00 0.00 2.57
3738 3814 7.275341 CAGCAGGAAAAACGCAAATATTGAATA 59.725 33.333 0.00 0.00 0.00 1.75
3739 3815 7.489113 AGCAGGAAAAACGCAAATATTGAATAG 59.511 33.333 0.00 0.00 0.00 1.73
3740 3816 7.275560 GCAGGAAAAACGCAAATATTGAATAGT 59.724 33.333 0.00 0.00 0.00 2.12
3741 3817 9.139174 CAGGAAAAACGCAAATATTGAATAGTT 57.861 29.630 0.00 0.00 0.00 2.24
3742 3818 9.705290 AGGAAAAACGCAAATATTGAATAGTTT 57.295 25.926 0.00 0.00 31.88 2.66
3745 3821 9.592720 AAAAACGCAAATATTGAATAGTTTTGC 57.407 25.926 19.04 19.04 45.28 3.68
3746 3822 8.532977 AAACGCAAATATTGAATAGTTTTGCT 57.467 26.923 23.11 13.61 46.08 3.91
3747 3823 9.632807 AAACGCAAATATTGAATAGTTTTGCTA 57.367 25.926 23.11 0.00 46.08 3.49
3748 3824 8.841444 ACGCAAATATTGAATAGTTTTGCTAG 57.159 30.769 23.11 15.73 46.08 3.42
3749 3825 8.673711 ACGCAAATATTGAATAGTTTTGCTAGA 58.326 29.630 23.11 0.00 46.08 2.43
3750 3826 9.502145 CGCAAATATTGAATAGTTTTGCTAGAA 57.498 29.630 23.11 0.00 46.08 2.10
3754 3830 9.474313 AATATTGAATAGTTTTGCTAGAACCCA 57.526 29.630 0.00 0.00 32.45 4.51
3755 3831 7.961326 ATTGAATAGTTTTGCTAGAACCCAT 57.039 32.000 0.00 0.00 32.45 4.00
3756 3832 7.391148 TTGAATAGTTTTGCTAGAACCCATC 57.609 36.000 0.00 0.00 32.45 3.51
3757 3833 6.721318 TGAATAGTTTTGCTAGAACCCATCT 58.279 36.000 0.00 0.00 42.48 2.90
3758 3834 7.857456 TGAATAGTTTTGCTAGAACCCATCTA 58.143 34.615 0.00 0.00 39.71 1.98
3795 3871 9.860898 AATTTTGTCTCATTCACCTTTTATAGC 57.139 29.630 0.00 0.00 0.00 2.97
3796 3872 7.391148 TTTGTCTCATTCACCTTTTATAGCC 57.609 36.000 0.00 0.00 0.00 3.93
3797 3873 6.061022 TGTCTCATTCACCTTTTATAGCCA 57.939 37.500 0.00 0.00 0.00 4.75
3798 3874 6.662755 TGTCTCATTCACCTTTTATAGCCAT 58.337 36.000 0.00 0.00 0.00 4.40
3799 3875 7.118723 TGTCTCATTCACCTTTTATAGCCATT 58.881 34.615 0.00 0.00 0.00 3.16
3800 3876 7.067372 TGTCTCATTCACCTTTTATAGCCATTG 59.933 37.037 0.00 0.00 0.00 2.82
3801 3877 7.283127 GTCTCATTCACCTTTTATAGCCATTGA 59.717 37.037 0.00 0.00 0.00 2.57
3802 3878 7.833682 TCTCATTCACCTTTTATAGCCATTGAA 59.166 33.333 0.00 0.00 0.00 2.69
3803 3879 8.537728 TCATTCACCTTTTATAGCCATTGAAT 57.462 30.769 0.00 0.00 33.72 2.57
3804 3880 8.415553 TCATTCACCTTTTATAGCCATTGAATG 58.584 33.333 12.61 12.61 45.38 2.67
3805 3881 7.716799 TTCACCTTTTATAGCCATTGAATGT 57.283 32.000 4.27 0.00 0.00 2.71
3806 3882 7.099266 TCACCTTTTATAGCCATTGAATGTG 57.901 36.000 4.27 0.00 0.00 3.21
3807 3883 6.889177 TCACCTTTTATAGCCATTGAATGTGA 59.111 34.615 4.27 0.00 0.00 3.58
3808 3884 7.560991 TCACCTTTTATAGCCATTGAATGTGAT 59.439 33.333 4.27 0.00 0.00 3.06
3809 3885 7.650504 CACCTTTTATAGCCATTGAATGTGATG 59.349 37.037 4.27 0.00 0.00 3.07
3810 3886 6.643770 CCTTTTATAGCCATTGAATGTGATGC 59.356 38.462 4.27 0.37 0.00 3.91
3811 3887 6.964807 TTTATAGCCATTGAATGTGATGCT 57.035 33.333 10.61 10.61 0.00 3.79
3812 3888 8.462589 TTTTATAGCCATTGAATGTGATGCTA 57.537 30.769 13.54 13.54 0.00 3.49
3813 3889 8.640063 TTTATAGCCATTGAATGTGATGCTAT 57.360 30.769 21.62 21.62 32.56 2.97
3814 3890 9.737844 TTTATAGCCATTGAATGTGATGCTATA 57.262 29.630 20.23 20.23 31.46 1.31
3815 3891 9.737844 TTATAGCCATTGAATGTGATGCTATAA 57.262 29.630 25.56 25.56 35.49 0.98
3816 3892 6.570672 AGCCATTGAATGTGATGCTATAAG 57.429 37.500 4.27 0.00 0.00 1.73
3817 3893 6.301486 AGCCATTGAATGTGATGCTATAAGA 58.699 36.000 4.27 0.00 0.00 2.10
3818 3894 6.206243 AGCCATTGAATGTGATGCTATAAGAC 59.794 38.462 4.27 0.00 0.00 3.01
3819 3895 6.596703 CCATTGAATGTGATGCTATAAGACG 58.403 40.000 4.27 0.00 0.00 4.18
3820 3896 5.657470 TTGAATGTGATGCTATAAGACGC 57.343 39.130 0.00 0.00 0.00 5.19
3821 3897 3.735746 TGAATGTGATGCTATAAGACGCG 59.264 43.478 3.53 3.53 0.00 6.01
3822 3898 2.863401 TGTGATGCTATAAGACGCGT 57.137 45.000 13.85 13.85 0.00 6.01
3823 3899 2.459934 TGTGATGCTATAAGACGCGTG 58.540 47.619 20.70 0.84 0.00 5.34
3824 3900 2.159296 TGTGATGCTATAAGACGCGTGT 60.159 45.455 20.70 11.10 0.00 4.49
3825 3901 2.216488 GTGATGCTATAAGACGCGTGTG 59.784 50.000 20.70 0.67 0.00 3.82
3826 3902 2.159296 TGATGCTATAAGACGCGTGTGT 60.159 45.455 20.70 8.29 0.00 3.72
3827 3903 1.624487 TGCTATAAGACGCGTGTGTG 58.376 50.000 20.70 5.10 0.00 3.82
3828 3904 0.297820 GCTATAAGACGCGTGTGTGC 59.702 55.000 20.70 11.90 0.00 4.57
3829 3905 1.909376 CTATAAGACGCGTGTGTGCT 58.091 50.000 20.70 3.34 0.00 4.40
3830 3906 1.583856 CTATAAGACGCGTGTGTGCTG 59.416 52.381 20.70 0.00 0.00 4.41
3831 3907 0.038618 ATAAGACGCGTGTGTGCTGA 60.039 50.000 20.70 0.00 0.00 4.26
3832 3908 0.937699 TAAGACGCGTGTGTGCTGAC 60.938 55.000 20.70 0.00 0.00 3.51
3833 3909 3.702555 GACGCGTGTGTGCTGACC 61.703 66.667 20.70 0.00 0.00 4.02
3834 3910 4.221422 ACGCGTGTGTGCTGACCT 62.221 61.111 12.93 0.00 0.00 3.85
3835 3911 3.705638 CGCGTGTGTGCTGACCTG 61.706 66.667 0.00 0.00 0.00 4.00
3836 3912 3.349006 GCGTGTGTGCTGACCTGG 61.349 66.667 0.00 0.00 0.00 4.45
3837 3913 2.666190 CGTGTGTGCTGACCTGGG 60.666 66.667 0.00 0.00 0.00 4.45
3838 3914 2.510906 GTGTGTGCTGACCTGGGT 59.489 61.111 0.00 0.00 0.00 4.51
3839 3915 1.152963 GTGTGTGCTGACCTGGGTT 60.153 57.895 0.00 0.00 0.00 4.11
3840 3916 1.152984 TGTGTGCTGACCTGGGTTG 60.153 57.895 0.00 0.00 0.00 3.77
3841 3917 1.152963 GTGTGCTGACCTGGGTTGT 60.153 57.895 0.00 0.00 0.00 3.32
3842 3918 0.107831 GTGTGCTGACCTGGGTTGTA 59.892 55.000 0.00 0.00 0.00 2.41
3843 3919 1.064003 TGTGCTGACCTGGGTTGTAT 58.936 50.000 0.00 0.00 0.00 2.29
3844 3920 1.003118 TGTGCTGACCTGGGTTGTATC 59.997 52.381 0.00 0.00 0.00 2.24
3845 3921 1.279271 GTGCTGACCTGGGTTGTATCT 59.721 52.381 0.00 0.00 0.00 1.98
3846 3922 1.278985 TGCTGACCTGGGTTGTATCTG 59.721 52.381 0.00 0.00 0.00 2.90
3847 3923 1.279271 GCTGACCTGGGTTGTATCTGT 59.721 52.381 0.00 0.00 0.00 3.41
3848 3924 2.290323 GCTGACCTGGGTTGTATCTGTT 60.290 50.000 0.00 0.00 0.00 3.16
3849 3925 3.600388 CTGACCTGGGTTGTATCTGTTC 58.400 50.000 0.00 0.00 0.00 3.18
3850 3926 3.248024 TGACCTGGGTTGTATCTGTTCT 58.752 45.455 0.00 0.00 0.00 3.01
3851 3927 3.650942 TGACCTGGGTTGTATCTGTTCTT 59.349 43.478 0.00 0.00 0.00 2.52
3852 3928 4.003648 GACCTGGGTTGTATCTGTTCTTG 58.996 47.826 0.00 0.00 0.00 3.02
3853 3929 3.394606 ACCTGGGTTGTATCTGTTCTTGT 59.605 43.478 0.00 0.00 0.00 3.16
3854 3930 4.141251 ACCTGGGTTGTATCTGTTCTTGTT 60.141 41.667 0.00 0.00 0.00 2.83
3855 3931 4.827284 CCTGGGTTGTATCTGTTCTTGTTT 59.173 41.667 0.00 0.00 0.00 2.83
3856 3932 5.301805 CCTGGGTTGTATCTGTTCTTGTTTT 59.698 40.000 0.00 0.00 0.00 2.43
3857 3933 6.385649 TGGGTTGTATCTGTTCTTGTTTTC 57.614 37.500 0.00 0.00 0.00 2.29
3858 3934 5.888724 TGGGTTGTATCTGTTCTTGTTTTCA 59.111 36.000 0.00 0.00 0.00 2.69
3859 3935 6.378564 TGGGTTGTATCTGTTCTTGTTTTCAA 59.621 34.615 0.00 0.00 38.21 2.69
3860 3936 7.093727 TGGGTTGTATCTGTTCTTGTTTTCAAA 60.094 33.333 0.00 0.00 39.47 2.69
3861 3937 7.762159 GGGTTGTATCTGTTCTTGTTTTCAAAA 59.238 33.333 0.00 0.00 39.47 2.44
3862 3938 9.313118 GGTTGTATCTGTTCTTGTTTTCAAAAT 57.687 29.630 0.00 0.00 39.47 1.82
3868 3944 9.820725 ATCTGTTCTTGTTTTCAAAATGAATGA 57.179 25.926 0.00 0.00 39.47 2.57
3869 3945 9.304731 TCTGTTCTTGTTTTCAAAATGAATGAG 57.695 29.630 0.00 0.00 39.47 2.90
3870 3946 9.304731 CTGTTCTTGTTTTCAAAATGAATGAGA 57.695 29.630 0.00 0.00 39.47 3.27
3871 3947 9.086336 TGTTCTTGTTTTCAAAATGAATGAGAC 57.914 29.630 0.00 0.00 39.47 3.36
3872 3948 8.542953 GTTCTTGTTTTCAAAATGAATGAGACC 58.457 33.333 0.00 0.00 39.47 3.85
3873 3949 7.780064 TCTTGTTTTCAAAATGAATGAGACCA 58.220 30.769 0.00 0.00 39.47 4.02
3874 3950 8.256605 TCTTGTTTTCAAAATGAATGAGACCAA 58.743 29.630 0.00 0.00 39.47 3.67
3875 3951 8.783833 TTGTTTTCAAAATGAATGAGACCAAA 57.216 26.923 0.00 0.00 36.11 3.28
3876 3952 8.961294 TGTTTTCAAAATGAATGAGACCAAAT 57.039 26.923 0.00 0.00 36.11 2.32
3877 3953 9.393512 TGTTTTCAAAATGAATGAGACCAAATT 57.606 25.926 0.00 0.00 36.11 1.82
3910 3986 4.528076 AGATGAGTTCTAGCTACTCCCA 57.472 45.455 17.14 5.85 41.02 4.37
3911 3987 4.873010 AGATGAGTTCTAGCTACTCCCAA 58.127 43.478 17.14 4.85 41.02 4.12
3912 3988 5.463154 AGATGAGTTCTAGCTACTCCCAAT 58.537 41.667 17.14 8.29 41.02 3.16
3924 4000 6.904626 AGCTACTCCCAATATTGAAATGTCT 58.095 36.000 17.23 3.17 0.00 3.41
3946 4022 6.091441 GTCTTGCTCGTATCATATGAAATCCC 59.909 42.308 9.99 0.00 0.00 3.85
4019 5914 2.689658 TCCAACAGGTTTGAGAGGAGA 58.310 47.619 0.00 0.00 0.00 3.71
4022 5917 1.650528 ACAGGTTTGAGAGGAGAGGG 58.349 55.000 0.00 0.00 0.00 4.30
4044 5939 1.128188 AAAACTCCTCCCCTCACGCT 61.128 55.000 0.00 0.00 0.00 5.07
4048 5943 2.765807 CCTCCCCTCACGCTGGAT 60.766 66.667 0.00 0.00 0.00 3.41
4072 5967 2.835431 AGGGATCTCTCACCGCCG 60.835 66.667 0.00 0.00 0.00 6.46
4098 5993 0.123266 ATTTCCCCTCCCCTTCCTCA 59.877 55.000 0.00 0.00 0.00 3.86
4099 5994 0.123266 TTTCCCCTCCCCTTCCTCAT 59.877 55.000 0.00 0.00 0.00 2.90
4119 6014 4.379243 CCAGCAGAGGACGCGGTT 62.379 66.667 12.47 0.00 0.00 4.44
4141 6036 3.986006 AAAGCCTCGCCGACGTCA 61.986 61.111 17.16 0.00 41.18 4.35
4161 6056 4.664677 AGCTGCGAGGCGTTTCGT 62.665 61.111 11.30 0.00 42.38 3.85
4271 6166 0.107165 GGTGGGTCTATGTTGGGCTC 60.107 60.000 0.00 0.00 0.00 4.70
4333 6228 0.320073 CCCACTCGAAACCTGCGTTA 60.320 55.000 0.00 0.00 0.00 3.18
4361 6256 0.602562 CAAGCGGCCTCATTTGGAAA 59.397 50.000 0.00 0.00 0.00 3.13
4362 6257 0.603065 AAGCGGCCTCATTTGGAAAC 59.397 50.000 0.00 0.00 0.00 2.78
4371 6266 4.787598 CCTCATTTGGAAACTGAGAAACG 58.212 43.478 8.45 0.00 38.96 3.60
4372 6267 4.515191 CCTCATTTGGAAACTGAGAAACGA 59.485 41.667 8.45 0.00 38.96 3.85
4435 6330 2.678336 GTGCCCTGTTTGACACTATAGC 59.322 50.000 0.00 0.00 0.00 2.97
4443 6338 0.394762 TGACACTATAGCGACCCGGT 60.395 55.000 0.00 0.00 41.50 5.28
4458 6353 1.947456 CCCGGTTTTTCCTATAGCAGC 59.053 52.381 0.00 0.00 0.00 5.25
4462 6357 4.439057 CGGTTTTTCCTATAGCAGCACTA 58.561 43.478 0.00 0.00 34.64 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.843309 TCCACCAAACTTGCAGAGGA 59.157 50.000 0.00 0.00 0.00 3.71
1 2 1.542915 CATCCACCAAACTTGCAGAGG 59.457 52.381 0.00 0.00 0.00 3.69
2 3 2.486982 CTCATCCACCAAACTTGCAGAG 59.513 50.000 0.00 0.00 0.00 3.35
3 4 2.106338 TCTCATCCACCAAACTTGCAGA 59.894 45.455 0.00 0.00 0.00 4.26
4 5 2.486982 CTCTCATCCACCAAACTTGCAG 59.513 50.000 0.00 0.00 0.00 4.41
5 6 2.507484 CTCTCATCCACCAAACTTGCA 58.493 47.619 0.00 0.00 0.00 4.08
6 7 1.200948 GCTCTCATCCACCAAACTTGC 59.799 52.381 0.00 0.00 0.00 4.01
7 8 1.815003 GGCTCTCATCCACCAAACTTG 59.185 52.381 0.00 0.00 0.00 3.16
8 9 1.425066 TGGCTCTCATCCACCAAACTT 59.575 47.619 0.00 0.00 0.00 2.66
9 10 1.004044 CTGGCTCTCATCCACCAAACT 59.996 52.381 0.00 0.00 0.00 2.66
10 11 1.457346 CTGGCTCTCATCCACCAAAC 58.543 55.000 0.00 0.00 0.00 2.93
11 12 0.329261 CCTGGCTCTCATCCACCAAA 59.671 55.000 0.00 0.00 0.00 3.28
12 13 0.547471 TCCTGGCTCTCATCCACCAA 60.547 55.000 0.00 0.00 0.00 3.67
13 14 0.547471 TTCCTGGCTCTCATCCACCA 60.547 55.000 0.00 0.00 0.00 4.17
14 15 0.179936 CTTCCTGGCTCTCATCCACC 59.820 60.000 0.00 0.00 0.00 4.61
15 16 0.179936 CCTTCCTGGCTCTCATCCAC 59.820 60.000 0.00 0.00 0.00 4.02
16 17 2.612760 CCTTCCTGGCTCTCATCCA 58.387 57.895 0.00 0.00 0.00 3.41
33 34 2.045926 ATGGTCTTCGGCACTGCC 60.046 61.111 10.35 10.35 46.75 4.85
34 35 3.044059 GCATGGTCTTCGGCACTGC 62.044 63.158 0.00 0.00 0.00 4.40
35 36 2.743752 CGCATGGTCTTCGGCACTG 61.744 63.158 0.00 0.00 0.00 3.66
36 37 2.434884 CGCATGGTCTTCGGCACT 60.435 61.111 0.00 0.00 0.00 4.40
37 38 3.499737 CCGCATGGTCTTCGGCAC 61.500 66.667 0.00 0.00 36.53 5.01
38 39 3.247056 TTCCGCATGGTCTTCGGCA 62.247 57.895 4.05 0.00 42.65 5.69
39 40 2.435938 TTCCGCATGGTCTTCGGC 60.436 61.111 4.05 0.00 42.65 5.54
40 41 1.815421 CCTTCCGCATGGTCTTCGG 60.815 63.158 2.62 2.62 44.16 4.30
41 42 1.084370 GTCCTTCCGCATGGTCTTCG 61.084 60.000 0.00 0.00 36.30 3.79
42 43 0.250513 AGTCCTTCCGCATGGTCTTC 59.749 55.000 0.00 0.00 36.30 2.87
43 44 0.693049 AAGTCCTTCCGCATGGTCTT 59.307 50.000 0.00 0.00 36.30 3.01
44 45 0.693049 AAAGTCCTTCCGCATGGTCT 59.307 50.000 0.00 0.00 36.30 3.85
45 46 0.804989 CAAAGTCCTTCCGCATGGTC 59.195 55.000 0.00 0.00 36.30 4.02
46 47 0.400213 TCAAAGTCCTTCCGCATGGT 59.600 50.000 0.00 0.00 36.30 3.55
47 48 1.755179 ATCAAAGTCCTTCCGCATGG 58.245 50.000 0.00 0.00 0.00 3.66
48 49 2.749076 TGAATCAAAGTCCTTCCGCATG 59.251 45.455 0.00 0.00 0.00 4.06
49 50 3.071874 TGAATCAAAGTCCTTCCGCAT 57.928 42.857 0.00 0.00 0.00 4.73
50 51 2.559698 TGAATCAAAGTCCTTCCGCA 57.440 45.000 0.00 0.00 0.00 5.69
51 52 4.168760 CAAATGAATCAAAGTCCTTCCGC 58.831 43.478 0.00 0.00 0.00 5.54
52 53 5.048782 TCACAAATGAATCAAAGTCCTTCCG 60.049 40.000 0.00 0.00 0.00 4.30
53 54 6.331369 TCACAAATGAATCAAAGTCCTTCC 57.669 37.500 0.00 0.00 0.00 3.46
54 55 6.309737 GCATCACAAATGAATCAAAGTCCTTC 59.690 38.462 0.00 0.00 38.69 3.46
55 56 6.014840 AGCATCACAAATGAATCAAAGTCCTT 60.015 34.615 0.00 0.00 38.69 3.36
56 57 5.479375 AGCATCACAAATGAATCAAAGTCCT 59.521 36.000 0.00 0.00 38.69 3.85
57 58 5.717119 AGCATCACAAATGAATCAAAGTCC 58.283 37.500 0.00 0.00 38.69 3.85
58 59 6.384224 TGAGCATCACAAATGAATCAAAGTC 58.616 36.000 0.00 0.00 42.56 3.01
59 60 6.335471 TGAGCATCACAAATGAATCAAAGT 57.665 33.333 0.00 0.00 42.56 2.66
78 79 2.159198 CCATAAACACCAGGCAATGAGC 60.159 50.000 0.00 0.00 44.65 4.26
79 80 3.355378 TCCATAAACACCAGGCAATGAG 58.645 45.455 0.00 0.00 0.00 2.90
80 81 3.448093 TCCATAAACACCAGGCAATGA 57.552 42.857 0.00 0.00 0.00 2.57
81 82 4.244862 GTTTCCATAAACACCAGGCAATG 58.755 43.478 0.00 0.00 43.73 2.82
82 83 4.535526 GTTTCCATAAACACCAGGCAAT 57.464 40.909 0.00 0.00 43.73 3.56
92 93 9.626045 CTCTATTGTTCCTTTGTTTCCATAAAC 57.374 33.333 0.00 0.00 44.40 2.01
93 94 9.362151 ACTCTATTGTTCCTTTGTTTCCATAAA 57.638 29.630 0.00 0.00 0.00 1.40
94 95 8.934023 ACTCTATTGTTCCTTTGTTTCCATAA 57.066 30.769 0.00 0.00 0.00 1.90
96 97 9.533831 AATACTCTATTGTTCCTTTGTTTCCAT 57.466 29.630 0.00 0.00 0.00 3.41
97 98 8.934023 AATACTCTATTGTTCCTTTGTTTCCA 57.066 30.769 0.00 0.00 0.00 3.53
98 99 9.626045 CAAATACTCTATTGTTCCTTTGTTTCC 57.374 33.333 0.00 0.00 0.00 3.13
99 100 9.626045 CCAAATACTCTATTGTTCCTTTGTTTC 57.374 33.333 0.00 0.00 0.00 2.78
100 101 9.143155 ACCAAATACTCTATTGTTCCTTTGTTT 57.857 29.630 0.00 0.00 0.00 2.83
101 102 8.706322 ACCAAATACTCTATTGTTCCTTTGTT 57.294 30.769 0.00 0.00 0.00 2.83
102 103 9.449719 CTACCAAATACTCTATTGTTCCTTTGT 57.550 33.333 0.00 0.00 0.00 2.83
103 104 8.893727 CCTACCAAATACTCTATTGTTCCTTTG 58.106 37.037 0.00 0.00 0.00 2.77
104 105 8.053355 CCCTACCAAATACTCTATTGTTCCTTT 58.947 37.037 0.00 0.00 0.00 3.11
105 106 7.574607 CCCTACCAAATACTCTATTGTTCCTT 58.425 38.462 0.00 0.00 0.00 3.36
106 107 6.409349 GCCCTACCAAATACTCTATTGTTCCT 60.409 42.308 0.00 0.00 0.00 3.36
107 108 5.763698 GCCCTACCAAATACTCTATTGTTCC 59.236 44.000 0.00 0.00 0.00 3.62
108 109 6.483640 CAGCCCTACCAAATACTCTATTGTTC 59.516 42.308 0.00 0.00 0.00 3.18
109 110 6.357367 CAGCCCTACCAAATACTCTATTGTT 58.643 40.000 0.00 0.00 0.00 2.83
110 111 5.163195 CCAGCCCTACCAAATACTCTATTGT 60.163 44.000 0.00 0.00 0.00 2.71
111 112 5.308825 CCAGCCCTACCAAATACTCTATTG 58.691 45.833 0.00 0.00 0.00 1.90
112 113 4.202472 GCCAGCCCTACCAAATACTCTATT 60.202 45.833 0.00 0.00 0.00 1.73
113 114 3.328050 GCCAGCCCTACCAAATACTCTAT 59.672 47.826 0.00 0.00 0.00 1.98
114 115 2.704065 GCCAGCCCTACCAAATACTCTA 59.296 50.000 0.00 0.00 0.00 2.43
115 116 1.490910 GCCAGCCCTACCAAATACTCT 59.509 52.381 0.00 0.00 0.00 3.24
116 117 1.211949 TGCCAGCCCTACCAAATACTC 59.788 52.381 0.00 0.00 0.00 2.59
117 118 1.295020 TGCCAGCCCTACCAAATACT 58.705 50.000 0.00 0.00 0.00 2.12
118 119 2.230660 GATGCCAGCCCTACCAAATAC 58.769 52.381 0.00 0.00 0.00 1.89
119 120 1.849692 TGATGCCAGCCCTACCAAATA 59.150 47.619 0.00 0.00 0.00 1.40
120 121 0.630673 TGATGCCAGCCCTACCAAAT 59.369 50.000 0.00 0.00 0.00 2.32
121 122 0.630673 ATGATGCCAGCCCTACCAAA 59.369 50.000 0.00 0.00 0.00 3.28
122 123 0.106569 CATGATGCCAGCCCTACCAA 60.107 55.000 0.00 0.00 0.00 3.67
123 124 0.987613 TCATGATGCCAGCCCTACCA 60.988 55.000 0.00 0.00 0.00 3.25
124 125 0.183492 TTCATGATGCCAGCCCTACC 59.817 55.000 0.00 0.00 0.00 3.18
125 126 1.884579 CATTCATGATGCCAGCCCTAC 59.115 52.381 0.00 0.00 0.00 3.18
126 127 1.776063 TCATTCATGATGCCAGCCCTA 59.224 47.619 0.00 0.00 35.64 3.53
127 128 0.554305 TCATTCATGATGCCAGCCCT 59.446 50.000 0.00 0.00 35.64 5.19
128 129 0.959553 CTCATTCATGATGCCAGCCC 59.040 55.000 0.00 0.00 36.02 5.19
129 130 0.314302 GCTCATTCATGATGCCAGCC 59.686 55.000 0.00 0.00 36.02 4.85
130 131 1.319541 AGCTCATTCATGATGCCAGC 58.680 50.000 0.00 2.29 36.40 4.85
131 132 3.075148 CCTAGCTCATTCATGATGCCAG 58.925 50.000 0.00 0.00 36.02 4.85
132 133 2.440627 ACCTAGCTCATTCATGATGCCA 59.559 45.455 0.00 0.00 36.02 4.92
133 134 3.137446 ACCTAGCTCATTCATGATGCC 57.863 47.619 0.00 0.00 36.02 4.40
134 135 4.892433 AGTACCTAGCTCATTCATGATGC 58.108 43.478 0.00 0.00 36.02 3.91
135 136 7.040494 CCATAGTACCTAGCTCATTCATGATG 58.960 42.308 0.00 0.00 36.02 3.07
136 137 6.956435 TCCATAGTACCTAGCTCATTCATGAT 59.044 38.462 0.00 0.00 36.02 2.45
137 138 6.314917 TCCATAGTACCTAGCTCATTCATGA 58.685 40.000 0.00 0.00 35.16 3.07
138 139 6.210385 ACTCCATAGTACCTAGCTCATTCATG 59.790 42.308 0.00 0.00 32.84 3.07
139 140 6.210385 CACTCCATAGTACCTAGCTCATTCAT 59.790 42.308 0.00 0.00 33.48 2.57
140 141 5.536538 CACTCCATAGTACCTAGCTCATTCA 59.463 44.000 0.00 0.00 33.48 2.57
141 142 5.565834 GCACTCCATAGTACCTAGCTCATTC 60.566 48.000 0.00 0.00 33.48 2.67
142 143 4.282195 GCACTCCATAGTACCTAGCTCATT 59.718 45.833 0.00 0.00 33.48 2.57
143 144 3.829601 GCACTCCATAGTACCTAGCTCAT 59.170 47.826 0.00 0.00 33.48 2.90
144 145 3.223435 GCACTCCATAGTACCTAGCTCA 58.777 50.000 0.00 0.00 33.48 4.26
145 146 3.223435 TGCACTCCATAGTACCTAGCTC 58.777 50.000 0.00 0.00 33.48 4.09
146 147 3.314307 TGCACTCCATAGTACCTAGCT 57.686 47.619 0.00 0.00 33.48 3.32
147 148 3.056465 GGATGCACTCCATAGTACCTAGC 60.056 52.174 9.50 0.00 44.26 3.42
148 149 4.792521 GGATGCACTCCATAGTACCTAG 57.207 50.000 9.50 0.00 44.26 3.02
159 160 1.470632 CGTTCTCTGAGGATGCACTCC 60.471 57.143 4.59 6.98 45.33 3.85
160 161 1.919918 CGTTCTCTGAGGATGCACTC 58.080 55.000 4.59 0.00 37.99 3.51
161 162 0.108424 GCGTTCTCTGAGGATGCACT 60.108 55.000 22.42 0.00 0.00 4.40
162 163 0.390340 TGCGTTCTCTGAGGATGCAC 60.390 55.000 25.36 2.71 0.00 4.57
163 164 0.321346 TTGCGTTCTCTGAGGATGCA 59.679 50.000 25.36 25.36 0.00 3.96
164 165 1.129437 GTTTGCGTTCTCTGAGGATGC 59.871 52.381 20.94 20.94 0.00 3.91
165 166 2.414481 CAGTTTGCGTTCTCTGAGGATG 59.586 50.000 4.59 2.46 0.00 3.51
166 167 2.037772 ACAGTTTGCGTTCTCTGAGGAT 59.962 45.455 4.59 0.00 0.00 3.24
167 168 1.412710 ACAGTTTGCGTTCTCTGAGGA 59.587 47.619 4.59 0.00 0.00 3.71
168 169 1.528586 CACAGTTTGCGTTCTCTGAGG 59.471 52.381 4.59 0.00 0.00 3.86
169 170 1.528586 CCACAGTTTGCGTTCTCTGAG 59.471 52.381 0.00 0.00 0.00 3.35
170 171 1.581934 CCACAGTTTGCGTTCTCTGA 58.418 50.000 0.00 0.00 0.00 3.27
171 172 0.588252 CCCACAGTTTGCGTTCTCTG 59.412 55.000 0.00 0.00 0.00 3.35
172 173 0.468226 TCCCACAGTTTGCGTTCTCT 59.532 50.000 0.00 0.00 0.00 3.10
173 174 0.868406 CTCCCACAGTTTGCGTTCTC 59.132 55.000 0.00 0.00 0.00 2.87
174 175 0.180406 ACTCCCACAGTTTGCGTTCT 59.820 50.000 0.00 0.00 26.56 3.01
175 176 1.021968 AACTCCCACAGTTTGCGTTC 58.978 50.000 0.00 0.00 43.38 3.95
176 177 2.218603 CTAACTCCCACAGTTTGCGTT 58.781 47.619 0.00 0.00 43.38 4.84
177 178 1.878953 CTAACTCCCACAGTTTGCGT 58.121 50.000 0.00 0.00 43.38 5.24
180 181 2.154462 CTGGCTAACTCCCACAGTTTG 58.846 52.381 0.00 0.00 43.38 2.93
181 182 1.774856 ACTGGCTAACTCCCACAGTTT 59.225 47.619 0.00 0.00 43.38 2.66
183 184 2.180276 CTACTGGCTAACTCCCACAGT 58.820 52.381 0.00 0.00 43.95 3.55
184 185 2.457598 TCTACTGGCTAACTCCCACAG 58.542 52.381 0.00 0.00 35.40 3.66
185 186 2.615986 TCTACTGGCTAACTCCCACA 57.384 50.000 0.00 0.00 0.00 4.17
186 187 2.832733 ACTTCTACTGGCTAACTCCCAC 59.167 50.000 0.00 0.00 0.00 4.61
187 188 2.832129 CACTTCTACTGGCTAACTCCCA 59.168 50.000 0.00 0.00 0.00 4.37
188 189 3.097614 TCACTTCTACTGGCTAACTCCC 58.902 50.000 0.00 0.00 0.00 4.30
189 190 4.221041 ACTTCACTTCTACTGGCTAACTCC 59.779 45.833 0.00 0.00 0.00 3.85
190 191 5.164954 CACTTCACTTCTACTGGCTAACTC 58.835 45.833 0.00 0.00 0.00 3.01
191 192 4.589374 ACACTTCACTTCTACTGGCTAACT 59.411 41.667 0.00 0.00 0.00 2.24
192 193 4.884247 ACACTTCACTTCTACTGGCTAAC 58.116 43.478 0.00 0.00 0.00 2.34
193 194 5.546621 AACACTTCACTTCTACTGGCTAA 57.453 39.130 0.00 0.00 0.00 3.09
194 195 5.537295 TGTAACACTTCACTTCTACTGGCTA 59.463 40.000 0.00 0.00 0.00 3.93
195 196 4.344102 TGTAACACTTCACTTCTACTGGCT 59.656 41.667 0.00 0.00 0.00 4.75
196 197 4.628074 TGTAACACTTCACTTCTACTGGC 58.372 43.478 0.00 0.00 0.00 4.85
197 198 7.730364 AAATGTAACACTTCACTTCTACTGG 57.270 36.000 0.00 0.00 0.00 4.00
198 199 9.438291 CAAAAATGTAACACTTCACTTCTACTG 57.562 33.333 0.00 0.00 0.00 2.74
199 200 9.174166 ACAAAAATGTAACACTTCACTTCTACT 57.826 29.630 0.00 0.00 0.00 2.57
200 201 9.221775 CACAAAAATGTAACACTTCACTTCTAC 57.778 33.333 0.00 0.00 0.00 2.59
201 202 9.168451 TCACAAAAATGTAACACTTCACTTCTA 57.832 29.630 0.00 0.00 0.00 2.10
202 203 8.050778 TCACAAAAATGTAACACTTCACTTCT 57.949 30.769 0.00 0.00 0.00 2.85
203 204 7.968405 ACTCACAAAAATGTAACACTTCACTTC 59.032 33.333 0.00 0.00 0.00 3.01
204 205 7.826690 ACTCACAAAAATGTAACACTTCACTT 58.173 30.769 0.00 0.00 0.00 3.16
205 206 7.391148 ACTCACAAAAATGTAACACTTCACT 57.609 32.000 0.00 0.00 0.00 3.41
206 207 8.395633 ACTACTCACAAAAATGTAACACTTCAC 58.604 33.333 0.00 0.00 0.00 3.18
207 208 8.500753 ACTACTCACAAAAATGTAACACTTCA 57.499 30.769 0.00 0.00 0.00 3.02
208 209 9.434559 GAACTACTCACAAAAATGTAACACTTC 57.565 33.333 0.00 0.00 0.00 3.01
209 210 8.403236 GGAACTACTCACAAAAATGTAACACTT 58.597 33.333 0.00 0.00 0.00 3.16
210 211 7.773690 AGGAACTACTCACAAAAATGTAACACT 59.226 33.333 0.00 0.00 36.02 3.55
211 212 7.927048 AGGAACTACTCACAAAAATGTAACAC 58.073 34.615 0.00 0.00 36.02 3.32
212 213 8.514330 AAGGAACTACTCACAAAAATGTAACA 57.486 30.769 0.00 0.00 38.49 2.41
214 215 9.280174 CCTAAGGAACTACTCACAAAAATGTAA 57.720 33.333 0.00 0.00 38.49 2.41
215 216 8.434392 ACCTAAGGAACTACTCACAAAAATGTA 58.566 33.333 0.00 0.00 38.49 2.29
216 217 7.228706 CACCTAAGGAACTACTCACAAAAATGT 59.771 37.037 0.00 0.00 38.49 2.71
217 218 7.308589 CCACCTAAGGAACTACTCACAAAAATG 60.309 40.741 0.00 0.00 38.49 2.32
218 219 6.715264 CCACCTAAGGAACTACTCACAAAAAT 59.285 38.462 0.00 0.00 38.49 1.82
219 220 6.059484 CCACCTAAGGAACTACTCACAAAAA 58.941 40.000 0.00 0.00 38.49 1.94
220 221 5.617252 CCACCTAAGGAACTACTCACAAAA 58.383 41.667 0.00 0.00 38.49 2.44
221 222 4.504340 GCCACCTAAGGAACTACTCACAAA 60.504 45.833 0.00 0.00 38.49 2.83
222 223 3.007614 GCCACCTAAGGAACTACTCACAA 59.992 47.826 0.00 0.00 38.49 3.33
223 224 2.565834 GCCACCTAAGGAACTACTCACA 59.434 50.000 0.00 0.00 38.49 3.58
224 225 2.093606 GGCCACCTAAGGAACTACTCAC 60.094 54.545 0.00 0.00 38.49 3.51
225 226 2.185387 GGCCACCTAAGGAACTACTCA 58.815 52.381 0.00 0.00 38.49 3.41
226 227 2.185387 TGGCCACCTAAGGAACTACTC 58.815 52.381 0.00 0.00 38.49 2.59
227 228 2.337359 TGGCCACCTAAGGAACTACT 57.663 50.000 0.00 0.00 38.49 2.57
228 229 2.483188 CGATGGCCACCTAAGGAACTAC 60.483 54.545 8.16 0.00 38.49 2.73
229 230 1.760613 CGATGGCCACCTAAGGAACTA 59.239 52.381 8.16 0.00 38.49 2.24
231 232 0.539986 TCGATGGCCACCTAAGGAAC 59.460 55.000 8.16 0.00 0.00 3.62
232 233 1.209504 CTTCGATGGCCACCTAAGGAA 59.790 52.381 8.16 4.69 0.00 3.36
233 234 0.830648 CTTCGATGGCCACCTAAGGA 59.169 55.000 8.16 0.00 0.00 3.36
234 235 0.179045 CCTTCGATGGCCACCTAAGG 60.179 60.000 15.83 15.83 0.00 2.69
235 236 0.541863 ACCTTCGATGGCCACCTAAG 59.458 55.000 8.16 5.83 0.00 2.18
236 237 0.539986 GACCTTCGATGGCCACCTAA 59.460 55.000 8.16 0.00 0.00 2.69
237 238 1.672854 CGACCTTCGATGGCCACCTA 61.673 60.000 8.16 0.00 43.74 3.08
238 239 2.990479 GACCTTCGATGGCCACCT 59.010 61.111 8.16 0.00 0.00 4.00
239 240 2.511600 CGACCTTCGATGGCCACC 60.512 66.667 8.16 0.00 43.74 4.61
240 241 2.511600 CCGACCTTCGATGGCCAC 60.512 66.667 8.16 0.47 43.74 5.01
241 242 3.781307 CCCGACCTTCGATGGCCA 61.781 66.667 8.56 8.56 43.74 5.36
242 243 3.447025 CTCCCGACCTTCGATGGCC 62.447 68.421 16.84 5.39 43.74 5.36
243 244 2.107141 CTCCCGACCTTCGATGGC 59.893 66.667 16.84 9.04 43.74 4.40
244 245 2.797278 CCCTCCCGACCTTCGATGG 61.797 68.421 15.45 15.45 43.74 3.51
245 246 2.815308 CCCTCCCGACCTTCGATG 59.185 66.667 0.00 0.00 43.74 3.84
246 247 3.155167 GCCCTCCCGACCTTCGAT 61.155 66.667 0.00 0.00 43.74 3.59
256 257 3.547513 ATAAGCGTCCGCCCTCCC 61.548 66.667 8.23 0.00 43.17 4.30
257 258 2.280186 CATAAGCGTCCGCCCTCC 60.280 66.667 8.23 0.00 43.17 4.30
258 259 1.883084 CACATAAGCGTCCGCCCTC 60.883 63.158 8.23 0.00 43.17 4.30
259 260 1.895020 TTCACATAAGCGTCCGCCCT 61.895 55.000 8.23 0.00 43.17 5.19
260 261 1.429148 CTTCACATAAGCGTCCGCCC 61.429 60.000 8.23 0.00 43.17 6.13
261 262 0.739813 ACTTCACATAAGCGTCCGCC 60.740 55.000 8.23 0.00 43.17 6.13
262 263 0.370273 CACTTCACATAAGCGTCCGC 59.630 55.000 2.94 2.94 42.33 5.54
263 264 0.999406 CCACTTCACATAAGCGTCCG 59.001 55.000 0.00 0.00 0.00 4.79
264 265 2.000447 GTCCACTTCACATAAGCGTCC 59.000 52.381 0.00 0.00 0.00 4.79
265 266 1.654105 CGTCCACTTCACATAAGCGTC 59.346 52.381 0.00 0.00 0.00 5.19
266 267 1.710013 CGTCCACTTCACATAAGCGT 58.290 50.000 0.00 0.00 0.00 5.07
267 268 0.370273 GCGTCCACTTCACATAAGCG 59.630 55.000 0.00 0.00 0.00 4.68
268 269 0.727398 GGCGTCCACTTCACATAAGC 59.273 55.000 0.00 0.00 0.00 3.09
269 270 2.093306 TGGCGTCCACTTCACATAAG 57.907 50.000 0.00 0.00 0.00 1.73
280 281 2.301870 AGAGATTACAAAGTGGCGTCCA 59.698 45.455 0.00 0.00 0.00 4.02
281 282 2.973945 AGAGATTACAAAGTGGCGTCC 58.026 47.619 0.00 0.00 0.00 4.79
282 283 3.746492 ACAAGAGATTACAAAGTGGCGTC 59.254 43.478 0.00 0.00 0.00 5.19
283 284 3.740115 ACAAGAGATTACAAAGTGGCGT 58.260 40.909 0.00 0.00 0.00 5.68
284 285 5.856126 TTACAAGAGATTACAAAGTGGCG 57.144 39.130 0.00 0.00 0.00 5.69
313 314 9.400638 CGTACCTTAGCTTTATAGAAGATGAAG 57.599 37.037 0.00 0.00 0.00 3.02
314 315 7.866393 GCGTACCTTAGCTTTATAGAAGATGAA 59.134 37.037 0.00 0.00 0.00 2.57
315 316 7.368833 GCGTACCTTAGCTTTATAGAAGATGA 58.631 38.462 0.00 0.00 0.00 2.92
316 317 6.586844 GGCGTACCTTAGCTTTATAGAAGATG 59.413 42.308 0.00 0.00 0.00 2.90
317 318 6.267014 TGGCGTACCTTAGCTTTATAGAAGAT 59.733 38.462 0.00 0.00 36.63 2.40
318 319 5.595542 TGGCGTACCTTAGCTTTATAGAAGA 59.404 40.000 0.00 0.00 36.63 2.87
319 320 5.839621 TGGCGTACCTTAGCTTTATAGAAG 58.160 41.667 0.00 0.00 36.63 2.85
320 321 5.857471 TGGCGTACCTTAGCTTTATAGAA 57.143 39.130 0.00 0.00 36.63 2.10
321 322 6.220930 CAATGGCGTACCTTAGCTTTATAGA 58.779 40.000 0.00 0.00 36.63 1.98
322 323 5.408604 CCAATGGCGTACCTTAGCTTTATAG 59.591 44.000 0.00 0.00 36.63 1.31
323 324 5.302360 CCAATGGCGTACCTTAGCTTTATA 58.698 41.667 0.00 0.00 36.63 0.98
324 325 4.134563 CCAATGGCGTACCTTAGCTTTAT 58.865 43.478 0.00 0.00 36.63 1.40
325 326 3.537580 CCAATGGCGTACCTTAGCTTTA 58.462 45.455 0.00 0.00 36.63 1.85
326 327 2.365582 CCAATGGCGTACCTTAGCTTT 58.634 47.619 0.00 0.00 36.63 3.51
327 328 2.017113 GCCAATGGCGTACCTTAGCTT 61.017 52.381 9.14 0.00 39.62 3.74
328 329 0.463833 GCCAATGGCGTACCTTAGCT 60.464 55.000 9.14 0.00 39.62 3.32
329 330 2.022520 GCCAATGGCGTACCTTAGC 58.977 57.895 9.14 0.00 39.62 3.09
339 340 1.865788 TTTCAGAGCACGCCAATGGC 61.866 55.000 15.52 15.52 46.75 4.40
340 341 0.597568 TTTTCAGAGCACGCCAATGG 59.402 50.000 0.00 0.00 0.00 3.16
341 342 2.420628 TTTTTCAGAGCACGCCAATG 57.579 45.000 0.00 0.00 0.00 2.82
396 397 3.907260 ATGCAGCTCGTGGTGTGGG 62.907 63.158 16.95 0.00 43.05 4.61
418 419 1.375268 GGCTGTGGCTCAGTCACTC 60.375 63.158 11.53 2.27 46.85 3.51
424 425 1.071987 TGAGTTGGCTGTGGCTCAG 59.928 57.895 12.07 12.07 46.12 3.35
425 426 1.227943 GTGAGTTGGCTGTGGCTCA 60.228 57.895 0.00 0.00 38.73 4.26
426 427 0.819259 TTGTGAGTTGGCTGTGGCTC 60.819 55.000 0.00 0.00 38.73 4.70
429 430 2.361757 TGAATTTGTGAGTTGGCTGTGG 59.638 45.455 0.00 0.00 0.00 4.17
430 431 3.067180 ACTGAATTTGTGAGTTGGCTGTG 59.933 43.478 0.00 0.00 0.00 3.66
432 433 3.316029 TGACTGAATTTGTGAGTTGGCTG 59.684 43.478 0.00 0.00 0.00 4.85
439 442 3.567164 AGCCAGTTGACTGAATTTGTGAG 59.433 43.478 12.54 0.00 46.59 3.51
454 457 1.276622 CTACCAGGTACCAGCCAGTT 58.723 55.000 15.94 0.00 0.00 3.16
496 499 1.006922 GCAACCTTCTTGGCAGCAC 60.007 57.895 0.00 0.00 40.22 4.40
543 546 0.455815 AAGGCCAAAATCGATTCGCC 59.544 50.000 25.34 25.34 36.87 5.54
574 587 5.505173 TTCTAGCCAAATCAAGCTTATGC 57.495 39.130 0.00 0.00 40.56 3.14
579 592 4.916183 AGTCTTTCTAGCCAAATCAAGCT 58.084 39.130 0.00 0.00 43.20 3.74
580 593 5.182001 TCAAGTCTTTCTAGCCAAATCAAGC 59.818 40.000 0.00 0.00 0.00 4.01
581 594 6.429385 AGTCAAGTCTTTCTAGCCAAATCAAG 59.571 38.462 0.00 0.00 0.00 3.02
582 595 6.299141 AGTCAAGTCTTTCTAGCCAAATCAA 58.701 36.000 0.00 0.00 0.00 2.57
583 596 5.869579 AGTCAAGTCTTTCTAGCCAAATCA 58.130 37.500 0.00 0.00 0.00 2.57
584 597 6.348868 CCAAGTCAAGTCTTTCTAGCCAAATC 60.349 42.308 0.00 0.00 0.00 2.17
585 598 5.474876 CCAAGTCAAGTCTTTCTAGCCAAAT 59.525 40.000 0.00 0.00 0.00 2.32
586 599 4.821805 CCAAGTCAAGTCTTTCTAGCCAAA 59.178 41.667 0.00 0.00 0.00 3.28
587 600 4.102524 TCCAAGTCAAGTCTTTCTAGCCAA 59.897 41.667 0.00 0.00 0.00 4.52
588 601 3.646162 TCCAAGTCAAGTCTTTCTAGCCA 59.354 43.478 0.00 0.00 0.00 4.75
605 618 0.397941 TGAGGCTGAGGTTGTCCAAG 59.602 55.000 0.00 0.00 35.89 3.61
608 621 0.460987 CGATGAGGCTGAGGTTGTCC 60.461 60.000 0.00 0.00 0.00 4.02
636 649 3.454082 CCCAAGAATAGAGCAAGGTCTCT 59.546 47.826 4.89 0.00 44.88 3.10
646 665 1.487976 TGCTCCTGCCCAAGAATAGAG 59.512 52.381 0.00 0.00 38.71 2.43
712 731 2.113139 GTGTGTGTGGGTGGGAGG 59.887 66.667 0.00 0.00 0.00 4.30
718 737 4.250305 GGGAGCGTGTGTGTGGGT 62.250 66.667 0.00 0.00 0.00 4.51
721 740 1.227999 AATTCGGGAGCGTGTGTGTG 61.228 55.000 0.00 0.00 0.00 3.82
722 741 0.949105 GAATTCGGGAGCGTGTGTGT 60.949 55.000 0.00 0.00 0.00 3.72
723 742 0.670546 AGAATTCGGGAGCGTGTGTG 60.671 55.000 0.00 0.00 0.00 3.82
724 743 0.389948 GAGAATTCGGGAGCGTGTGT 60.390 55.000 0.00 0.00 0.00 3.72
780 799 0.977395 AAACGGAGAAGACTCAGGGG 59.023 55.000 0.00 0.00 44.22 4.79
899 918 4.043200 GCTGCAACCCGGTGCTTC 62.043 66.667 17.03 6.09 45.17 3.86
1612 1631 2.607187 AGCGACATTGACGACCTTTAG 58.393 47.619 12.54 0.00 0.00 1.85
1733 1752 1.028905 GTTGCAGCACCAACCAACTA 58.971 50.000 0.00 0.00 39.27 2.24
1756 1775 3.773630 CATGCGCCGTCGTTCGTT 61.774 61.111 4.18 0.00 38.14 3.85
1811 1830 0.883833 ATCCACCGCAAAGCTTCTTG 59.116 50.000 0.00 0.00 0.00 3.02
2088 2107 1.296392 CCAGCACACCGAGGATTGA 59.704 57.895 0.00 0.00 0.00 2.57
2771 2790 2.741092 GACTTGAGGTGGCCGTGA 59.259 61.111 0.00 0.00 0.00 4.35
3100 3119 2.017559 GAACCTGAGGTCCGGATCCG 62.018 65.000 27.65 27.65 33.12 4.18
3104 3123 1.975407 GTCGAACCTGAGGTCCGGA 60.975 63.158 11.15 0.00 33.12 5.14
3227 3246 1.227497 GGCCTTGAGCTCCTCGATG 60.227 63.158 12.15 0.00 43.05 3.84
3404 3434 0.160813 CATGTACGTGCGTGTCACAC 59.839 55.000 16.69 0.00 45.92 3.82
3405 3435 0.941936 CCATGTACGTGCGTGTCACA 60.942 55.000 21.95 6.33 45.92 3.58
3406 3436 0.665068 TCCATGTACGTGCGTGTCAC 60.665 55.000 21.95 0.26 42.23 3.67
3407 3437 0.388006 CTCCATGTACGTGCGTGTCA 60.388 55.000 21.95 9.27 0.00 3.58
3408 3438 1.683790 GCTCCATGTACGTGCGTGTC 61.684 60.000 21.95 9.07 0.00 3.67
3409 3439 1.736645 GCTCCATGTACGTGCGTGT 60.737 57.895 21.95 0.00 0.00 4.49
3410 3440 2.452813 GGCTCCATGTACGTGCGTG 61.453 63.158 17.81 17.81 0.00 5.34
3411 3441 2.125673 GGCTCCATGTACGTGCGT 60.126 61.111 9.72 2.05 0.00 5.24
3412 3442 1.089481 ATTGGCTCCATGTACGTGCG 61.089 55.000 9.72 4.13 0.00 5.34
3413 3443 0.378257 CATTGGCTCCATGTACGTGC 59.622 55.000 9.72 0.00 0.00 5.34
3414 3444 0.378257 GCATTGGCTCCATGTACGTG 59.622 55.000 8.18 8.18 36.96 4.49
3415 3445 2.780595 GCATTGGCTCCATGTACGT 58.219 52.632 0.00 0.00 36.96 3.57
3431 3461 3.765511 ACGTACTAGGTCCATGTTTAGCA 59.234 43.478 0.00 0.00 0.00 3.49
3432 3462 4.382345 ACGTACTAGGTCCATGTTTAGC 57.618 45.455 0.00 0.00 0.00 3.09
3449 3479 3.875727 GGTAGAGTGCAGATCAGTACGTA 59.124 47.826 0.00 0.00 0.00 3.57
3560 3617 8.049117 AGATGAACACCAATTAGCTAAAGATGA 58.951 33.333 10.85 0.00 0.00 2.92
3594 3669 3.242867 TGAATCCCTAATCCGCTCAGAT 58.757 45.455 0.00 0.00 0.00 2.90
3598 3673 3.753294 TTCTGAATCCCTAATCCGCTC 57.247 47.619 0.00 0.00 0.00 5.03
3631 3706 6.628919 ATCTGTACTAAAACACAACCCAAC 57.371 37.500 0.00 0.00 0.00 3.77
3655 3730 6.272318 CCTAAATTTTGCAACTGTGAACAGA 58.728 36.000 17.11 0.00 46.59 3.41
3689 3764 7.658525 TGGCCATGTTTTTAGAATATGTGAT 57.341 32.000 0.00 0.00 0.00 3.06
3730 3806 9.120538 GATGGGTTCTAGCAAAACTATTCAATA 57.879 33.333 0.00 0.00 0.00 1.90
3731 3807 7.836183 AGATGGGTTCTAGCAAAACTATTCAAT 59.164 33.333 0.00 0.00 30.96 2.57
3732 3808 7.175104 AGATGGGTTCTAGCAAAACTATTCAA 58.825 34.615 0.00 0.00 30.96 2.69
3733 3809 6.721318 AGATGGGTTCTAGCAAAACTATTCA 58.279 36.000 0.00 0.00 30.96 2.57
3734 3810 8.371770 CTAGATGGGTTCTAGCAAAACTATTC 57.628 38.462 0.00 0.00 45.63 1.75
3769 3845 9.860898 GCTATAAAAGGTGAATGAGACAAAATT 57.139 29.630 0.00 0.00 0.00 1.82
3770 3846 8.470002 GGCTATAAAAGGTGAATGAGACAAAAT 58.530 33.333 0.00 0.00 0.00 1.82
3771 3847 7.450014 TGGCTATAAAAGGTGAATGAGACAAAA 59.550 33.333 0.00 0.00 0.00 2.44
3772 3848 6.945435 TGGCTATAAAAGGTGAATGAGACAAA 59.055 34.615 0.00 0.00 0.00 2.83
3773 3849 6.480763 TGGCTATAAAAGGTGAATGAGACAA 58.519 36.000 0.00 0.00 0.00 3.18
3774 3850 6.061022 TGGCTATAAAAGGTGAATGAGACA 57.939 37.500 0.00 0.00 0.00 3.41
3775 3851 7.283127 TCAATGGCTATAAAAGGTGAATGAGAC 59.717 37.037 0.00 0.00 0.00 3.36
3776 3852 7.345691 TCAATGGCTATAAAAGGTGAATGAGA 58.654 34.615 0.00 0.00 0.00 3.27
3777 3853 7.572523 TCAATGGCTATAAAAGGTGAATGAG 57.427 36.000 0.00 0.00 0.00 2.90
3778 3854 7.953005 TTCAATGGCTATAAAAGGTGAATGA 57.047 32.000 0.00 0.00 0.00 2.57
3779 3855 8.583810 CATTCAATGGCTATAAAAGGTGAATG 57.416 34.615 14.56 14.56 42.48 2.67
3780 3856 8.199449 CACATTCAATGGCTATAAAAGGTGAAT 58.801 33.333 13.37 7.60 35.43 2.57
3781 3857 7.395772 TCACATTCAATGGCTATAAAAGGTGAA 59.604 33.333 16.82 8.19 33.60 3.18
3782 3858 6.889177 TCACATTCAATGGCTATAAAAGGTGA 59.111 34.615 15.82 15.82 33.60 4.02
3783 3859 7.099266 TCACATTCAATGGCTATAAAAGGTG 57.901 36.000 12.77 12.77 33.60 4.00
3784 3860 7.685155 GCATCACATTCAATGGCTATAAAAGGT 60.685 37.037 1.58 0.00 33.60 3.50
3785 3861 6.643770 GCATCACATTCAATGGCTATAAAAGG 59.356 38.462 1.58 0.00 33.60 3.11
3786 3862 7.431249 AGCATCACATTCAATGGCTATAAAAG 58.569 34.615 1.58 0.00 33.60 2.27
3787 3863 7.350744 AGCATCACATTCAATGGCTATAAAA 57.649 32.000 1.58 0.00 33.60 1.52
3788 3864 6.964807 AGCATCACATTCAATGGCTATAAA 57.035 33.333 1.58 0.00 33.60 1.40
3789 3865 9.737844 TTATAGCATCACATTCAATGGCTATAA 57.262 29.630 22.35 22.35 35.32 0.98
3790 3866 9.387257 CTTATAGCATCACATTCAATGGCTATA 57.613 33.333 16.27 16.27 31.20 1.31
3791 3867 8.105197 TCTTATAGCATCACATTCAATGGCTAT 58.895 33.333 17.71 17.71 32.32 2.97
3792 3868 7.388776 GTCTTATAGCATCACATTCAATGGCTA 59.611 37.037 1.58 5.51 33.60 3.93
3793 3869 6.206243 GTCTTATAGCATCACATTCAATGGCT 59.794 38.462 1.58 3.32 33.60 4.75
3794 3870 6.376978 GTCTTATAGCATCACATTCAATGGC 58.623 40.000 1.58 0.00 33.60 4.40
3795 3871 6.596703 CGTCTTATAGCATCACATTCAATGG 58.403 40.000 1.58 0.00 33.60 3.16
3796 3872 6.075918 GCGTCTTATAGCATCACATTCAATG 58.924 40.000 0.00 0.00 0.00 2.82
3797 3873 5.107337 CGCGTCTTATAGCATCACATTCAAT 60.107 40.000 0.00 0.00 0.00 2.57
3798 3874 4.209080 CGCGTCTTATAGCATCACATTCAA 59.791 41.667 0.00 0.00 0.00 2.69
3799 3875 3.735746 CGCGTCTTATAGCATCACATTCA 59.264 43.478 0.00 0.00 0.00 2.57
3800 3876 3.736252 ACGCGTCTTATAGCATCACATTC 59.264 43.478 5.58 0.00 0.00 2.67
3801 3877 3.490896 CACGCGTCTTATAGCATCACATT 59.509 43.478 9.86 0.00 0.00 2.71
3802 3878 3.052745 CACGCGTCTTATAGCATCACAT 58.947 45.455 9.86 0.00 0.00 3.21
3803 3879 2.159296 ACACGCGTCTTATAGCATCACA 60.159 45.455 9.86 0.00 0.00 3.58
3804 3880 2.216488 CACACGCGTCTTATAGCATCAC 59.784 50.000 9.86 0.00 0.00 3.06
3805 3881 2.159296 ACACACGCGTCTTATAGCATCA 60.159 45.455 9.86 0.00 0.00 3.07
3806 3882 2.216488 CACACACGCGTCTTATAGCATC 59.784 50.000 9.86 0.00 0.00 3.91
3807 3883 2.193447 CACACACGCGTCTTATAGCAT 58.807 47.619 9.86 0.00 0.00 3.79
3808 3884 1.624487 CACACACGCGTCTTATAGCA 58.376 50.000 9.86 0.00 0.00 3.49
3809 3885 0.297820 GCACACACGCGTCTTATAGC 59.702 55.000 9.86 5.38 0.00 2.97
3810 3886 1.583856 CAGCACACACGCGTCTTATAG 59.416 52.381 9.86 0.00 36.85 1.31
3811 3887 1.200484 TCAGCACACACGCGTCTTATA 59.800 47.619 9.86 0.00 36.85 0.98
3812 3888 0.038618 TCAGCACACACGCGTCTTAT 60.039 50.000 9.86 0.00 36.85 1.73
3813 3889 0.937699 GTCAGCACACACGCGTCTTA 60.938 55.000 9.86 0.00 36.85 2.10
3814 3890 2.106131 TCAGCACACACGCGTCTT 59.894 55.556 9.86 0.00 36.85 3.01
3815 3891 2.658593 GTCAGCACACACGCGTCT 60.659 61.111 9.86 0.00 36.85 4.18
3816 3892 3.702555 GGTCAGCACACACGCGTC 61.703 66.667 9.86 0.00 36.85 5.19
3817 3893 4.221422 AGGTCAGCACACACGCGT 62.221 61.111 5.58 5.58 36.85 6.01
3818 3894 3.705638 CAGGTCAGCACACACGCG 61.706 66.667 3.53 3.53 36.85 6.01
3819 3895 3.349006 CCAGGTCAGCACACACGC 61.349 66.667 0.00 0.00 0.00 5.34
3820 3896 2.666190 CCCAGGTCAGCACACACG 60.666 66.667 0.00 0.00 0.00 4.49
3821 3897 1.152963 AACCCAGGTCAGCACACAC 60.153 57.895 0.00 0.00 0.00 3.82
3822 3898 1.152984 CAACCCAGGTCAGCACACA 60.153 57.895 0.00 0.00 0.00 3.72
3823 3899 0.107831 TACAACCCAGGTCAGCACAC 59.892 55.000 0.00 0.00 0.00 3.82
3824 3900 1.003118 GATACAACCCAGGTCAGCACA 59.997 52.381 0.00 0.00 0.00 4.57
3825 3901 1.279271 AGATACAACCCAGGTCAGCAC 59.721 52.381 0.00 0.00 0.00 4.40
3826 3902 1.278985 CAGATACAACCCAGGTCAGCA 59.721 52.381 0.00 0.00 0.00 4.41
3827 3903 1.279271 ACAGATACAACCCAGGTCAGC 59.721 52.381 0.00 0.00 0.00 4.26
3828 3904 3.261897 AGAACAGATACAACCCAGGTCAG 59.738 47.826 0.00 0.00 0.00 3.51
3829 3905 3.248024 AGAACAGATACAACCCAGGTCA 58.752 45.455 0.00 0.00 0.00 4.02
3830 3906 3.983044 AGAACAGATACAACCCAGGTC 57.017 47.619 0.00 0.00 0.00 3.85
3831 3907 3.394606 ACAAGAACAGATACAACCCAGGT 59.605 43.478 0.00 0.00 0.00 4.00
3832 3908 4.021102 ACAAGAACAGATACAACCCAGG 57.979 45.455 0.00 0.00 0.00 4.45
3833 3909 6.039270 TGAAAACAAGAACAGATACAACCCAG 59.961 38.462 0.00 0.00 0.00 4.45
3834 3910 5.888724 TGAAAACAAGAACAGATACAACCCA 59.111 36.000 0.00 0.00 0.00 4.51
3835 3911 6.385649 TGAAAACAAGAACAGATACAACCC 57.614 37.500 0.00 0.00 0.00 4.11
3836 3912 8.696410 TTTTGAAAACAAGAACAGATACAACC 57.304 30.769 0.00 0.00 0.00 3.77
3842 3918 9.820725 TCATTCATTTTGAAAACAAGAACAGAT 57.179 25.926 0.00 0.00 40.12 2.90
3843 3919 9.304731 CTCATTCATTTTGAAAACAAGAACAGA 57.695 29.630 0.00 0.86 40.12 3.41
3844 3920 9.304731 TCTCATTCATTTTGAAAACAAGAACAG 57.695 29.630 0.00 0.00 40.12 3.16
3845 3921 9.086336 GTCTCATTCATTTTGAAAACAAGAACA 57.914 29.630 0.00 0.00 40.12 3.18
3846 3922 8.542953 GGTCTCATTCATTTTGAAAACAAGAAC 58.457 33.333 0.00 0.00 40.12 3.01
3847 3923 8.256605 TGGTCTCATTCATTTTGAAAACAAGAA 58.743 29.630 0.00 0.00 40.12 2.52
3848 3924 7.780064 TGGTCTCATTCATTTTGAAAACAAGA 58.220 30.769 0.00 0.00 40.12 3.02
3849 3925 8.422973 TTGGTCTCATTCATTTTGAAAACAAG 57.577 30.769 0.00 0.00 40.12 3.16
3850 3926 8.783833 TTTGGTCTCATTCATTTTGAAAACAA 57.216 26.923 0.00 0.00 40.12 2.83
3851 3927 8.961294 ATTTGGTCTCATTCATTTTGAAAACA 57.039 26.923 0.00 0.00 40.12 2.83
3888 3964 5.648330 TGGGAGTAGCTAGAACTCATCTA 57.352 43.478 20.80 6.15 44.25 1.98
3889 3965 4.528076 TGGGAGTAGCTAGAACTCATCT 57.472 45.455 20.80 0.00 44.25 2.90
3890 3966 5.799827 ATTGGGAGTAGCTAGAACTCATC 57.200 43.478 20.80 14.72 44.25 2.92
3891 3967 7.510685 TCAATATTGGGAGTAGCTAGAACTCAT 59.489 37.037 20.80 12.09 44.25 2.90
3892 3968 6.839134 TCAATATTGGGAGTAGCTAGAACTCA 59.161 38.462 20.80 4.26 44.25 3.41
3893 3969 7.291411 TCAATATTGGGAGTAGCTAGAACTC 57.709 40.000 15.36 14.30 42.19 3.01
3894 3970 7.676683 TTCAATATTGGGAGTAGCTAGAACT 57.323 36.000 15.36 0.00 0.00 3.01
3895 3971 8.778358 CATTTCAATATTGGGAGTAGCTAGAAC 58.222 37.037 15.36 0.00 0.00 3.01
3896 3972 8.494433 ACATTTCAATATTGGGAGTAGCTAGAA 58.506 33.333 15.36 0.00 0.00 2.10
3897 3973 8.034313 ACATTTCAATATTGGGAGTAGCTAGA 57.966 34.615 15.36 0.00 0.00 2.43
3898 3974 8.153550 AGACATTTCAATATTGGGAGTAGCTAG 58.846 37.037 15.36 0.00 0.00 3.42
3899 3975 8.034313 AGACATTTCAATATTGGGAGTAGCTA 57.966 34.615 15.36 0.00 0.00 3.32
3900 3976 6.904626 AGACATTTCAATATTGGGAGTAGCT 58.095 36.000 15.36 0.00 0.00 3.32
3901 3977 7.420800 CAAGACATTTCAATATTGGGAGTAGC 58.579 38.462 15.36 1.18 0.00 3.58
3902 3978 7.284034 AGCAAGACATTTCAATATTGGGAGTAG 59.716 37.037 15.36 4.26 0.00 2.57
3903 3979 7.118723 AGCAAGACATTTCAATATTGGGAGTA 58.881 34.615 15.36 0.00 0.00 2.59
3904 3980 5.954150 AGCAAGACATTTCAATATTGGGAGT 59.046 36.000 15.36 9.06 0.00 3.85
3905 3981 6.461110 AGCAAGACATTTCAATATTGGGAG 57.539 37.500 15.36 6.17 0.00 4.30
3906 3982 5.066375 CGAGCAAGACATTTCAATATTGGGA 59.934 40.000 15.36 5.03 0.00 4.37
3907 3983 5.163622 ACGAGCAAGACATTTCAATATTGGG 60.164 40.000 15.36 5.84 0.00 4.12
3908 3984 5.883661 ACGAGCAAGACATTTCAATATTGG 58.116 37.500 15.36 1.99 0.00 3.16
3909 3985 8.337532 TGATACGAGCAAGACATTTCAATATTG 58.662 33.333 9.29 9.29 0.00 1.90
3910 3986 8.437360 TGATACGAGCAAGACATTTCAATATT 57.563 30.769 0.00 0.00 0.00 1.28
3911 3987 8.613060 ATGATACGAGCAAGACATTTCAATAT 57.387 30.769 0.00 0.00 0.00 1.28
3912 3988 9.710900 ATATGATACGAGCAAGACATTTCAATA 57.289 29.630 0.00 0.00 0.00 1.90
3924 4000 5.700832 GTGGGATTTCATATGATACGAGCAA 59.299 40.000 6.17 0.00 0.00 3.91
3946 4022 5.603170 ATCAAATAGGCCAAAATCCTGTG 57.397 39.130 5.01 0.00 35.21 3.66
3985 5880 9.546428 CAAACCTGTTGGAAAGAATTCTTTATT 57.454 29.630 28.83 11.59 45.37 1.40
3987 5882 8.299990 TCAAACCTGTTGGAAAGAATTCTTTA 57.700 30.769 28.83 14.94 45.37 1.85
4044 5939 0.114560 GAGATCCCTCCCCGTATCCA 59.885 60.000 0.00 0.00 33.30 3.41
4048 5943 0.185416 GTGAGAGATCCCTCCCCGTA 59.815 60.000 1.29 0.00 40.30 4.02
4072 5967 1.753078 GGGAGGGGAAATTGTCGGC 60.753 63.158 0.00 0.00 0.00 5.54
4076 5971 0.710588 GGAAGGGGAGGGGAAATTGT 59.289 55.000 0.00 0.00 0.00 2.71
4098 5993 2.780094 CGCGTCCTCTGCTGGAGAT 61.780 63.158 0.00 0.00 44.45 2.75
4099 5994 3.443925 CGCGTCCTCTGCTGGAGA 61.444 66.667 0.00 0.00 44.45 3.71
4119 6014 4.002506 TCGGCGAGGCTTTGCTCA 62.003 61.111 4.99 0.00 33.93 4.26
4141 6036 4.996434 AAACGCCTCGCAGCTGCT 62.996 61.111 34.22 13.71 39.32 4.24
4197 6092 0.034896 AGCACAACGTCCCAACCTAG 59.965 55.000 0.00 0.00 0.00 3.02
4249 6144 1.549037 GCCCAACATAGACCCACCAAA 60.549 52.381 0.00 0.00 0.00 3.28
4271 6166 5.721232 ACTAATCTAGAAACGTGTTCTGGG 58.279 41.667 17.66 12.34 0.00 4.45
4280 6175 9.262472 CGGAAATTTTGAACTAATCTAGAAACG 57.738 33.333 0.00 0.00 0.00 3.60
4333 6228 2.043953 GGCCGCTTGGGAATTCCT 60.044 61.111 23.63 0.00 38.47 3.36
4361 6256 2.301870 TGCCCTATGTTCGTTTCTCAGT 59.698 45.455 0.00 0.00 0.00 3.41
4362 6257 2.673368 GTGCCCTATGTTCGTTTCTCAG 59.327 50.000 0.00 0.00 0.00 3.35
4402 6297 6.151144 GTCAAACAGGGCACTACATAGAAAAT 59.849 38.462 0.00 0.00 0.00 1.82
4409 6304 2.106511 AGTGTCAAACAGGGCACTACAT 59.893 45.455 0.00 0.00 40.00 2.29
4435 6330 2.207590 GCTATAGGAAAAACCGGGTCG 58.792 52.381 6.32 0.00 44.74 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.