Multiple sequence alignment - TraesCS7B01G138200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G138200 chr7B 100.000 9376 0 0 1 9376 173858528 173867903 0.000000e+00 17315.0
1 TraesCS7B01G138200 chr7B 81.579 836 81 34 2 809 161241817 161241027 2.880000e-174 623.0
2 TraesCS7B01G138200 chr7D 95.645 5304 158 40 1950 7212 224051102 224056373 0.000000e+00 8447.0
3 TraesCS7B01G138200 chr7D 93.946 1817 79 9 7573 9376 224056712 224058510 0.000000e+00 2717.0
4 TraesCS7B01G138200 chr7D 88.808 1099 68 22 810 1885 224050034 224051100 0.000000e+00 1297.0
5 TraesCS7B01G138200 chr7D 89.431 123 10 3 7217 7337 390929735 390929856 1.630000e-32 152.0
6 TraesCS7B01G138200 chr7A 96.586 4189 109 15 3035 7215 237522729 237518567 0.000000e+00 6913.0
7 TraesCS7B01G138200 chr7A 92.135 2009 108 20 7399 9376 237518564 237516575 0.000000e+00 2789.0
8 TraesCS7B01G138200 chr7A 96.367 1101 35 2 1950 3049 237524009 237522913 0.000000e+00 1807.0
9 TraesCS7B01G138200 chr7A 88.889 1098 70 21 810 1888 237525072 237524008 0.000000e+00 1304.0
10 TraesCS7B01G138200 chr7A 95.789 95 4 0 7261 7355 612375605 612375699 4.530000e-33 154.0
11 TraesCS7B01G138200 chr7A 89.815 108 11 0 7257 7364 690364556 690364449 1.270000e-28 139.0
12 TraesCS7B01G138200 chr7A 98.000 50 1 0 7347 7396 205167811 205167860 4.660000e-13 87.9
13 TraesCS7B01G138200 chr3B 89.486 837 57 12 1 809 617687262 617688095 0.000000e+00 1029.0
14 TraesCS7B01G138200 chr3B 97.701 87 2 0 7264 7350 456070047 456069961 5.870000e-32 150.0
15 TraesCS7B01G138200 chr3B 94.545 55 2 1 7213 7267 588476743 588476690 6.030000e-12 84.2
16 TraesCS7B01G138200 chr2B 89.115 836 62 10 1 810 444551685 444550853 0.000000e+00 1013.0
17 TraesCS7B01G138200 chr2B 83.776 715 93 20 111 811 25270291 25269586 0.000000e+00 656.0
18 TraesCS7B01G138200 chr2B 89.167 120 10 1 7263 7379 30331605 30331724 7.590000e-31 147.0
19 TraesCS7B01G138200 chr2B 96.154 52 2 0 7214 7265 733151089 733151140 1.680000e-12 86.1
20 TraesCS7B01G138200 chr5D 88.507 844 62 15 1 810 385125947 385126789 0.000000e+00 989.0
21 TraesCS7B01G138200 chr5D 96.739 92 2 1 7260 7351 230494547 230494637 1.630000e-32 152.0
22 TraesCS7B01G138200 chr5D 73.563 435 90 19 2158 2584 383780720 383780303 9.810000e-30 143.0
23 TraesCS7B01G138200 chr4A 88.333 840 65 18 1 812 710817773 710818607 0.000000e+00 977.0
24 TraesCS7B01G138200 chr4A 91.765 85 6 1 7316 7400 597826965 597827048 5.950000e-22 117.0
25 TraesCS7B01G138200 chr4A 88.000 75 9 0 7217 7291 597826888 597826962 1.300000e-13 89.8
26 TraesCS7B01G138200 chr6D 87.952 830 67 16 1 809 78029878 78029061 0.000000e+00 948.0
27 TraesCS7B01G138200 chr6D 89.062 64 6 1 7214 7276 465968862 465968925 2.810000e-10 78.7
28 TraesCS7B01G138200 chr6D 76.027 146 31 4 6331 6474 461357664 461357807 1.310000e-08 73.1
29 TraesCS7B01G138200 chr3A 86.707 835 75 18 1 809 746547960 746547136 0.000000e+00 894.0
30 TraesCS7B01G138200 chr3A 84.699 183 24 4 7216 7396 171176829 171177009 7.480000e-41 180.0
31 TraesCS7B01G138200 chr1D 85.305 837 90 13 1 810 379575711 379574881 0.000000e+00 833.0
32 TraesCS7B01G138200 chr1D 82.360 839 82 22 1 809 296972422 296973224 0.000000e+00 669.0
33 TraesCS7B01G138200 chr1D 87.931 116 10 4 7260 7372 351546596 351546482 5.910000e-27 134.0
34 TraesCS7B01G138200 chr1D 82.353 85 11 4 7315 7398 484117748 484117829 4.700000e-08 71.3
35 TraesCS7B01G138200 chr5B 84.775 821 102 17 1 812 456986930 456986124 0.000000e+00 802.0
36 TraesCS7B01G138200 chr5B 85.420 583 39 23 2 559 613181505 613180944 1.770000e-156 564.0
37 TraesCS7B01G138200 chr5B 72.581 434 87 20 2158 2584 460270221 460269813 7.700000e-21 113.0
38 TraesCS7B01G138200 chr4D 84.487 838 95 15 1 809 483613551 483612720 0.000000e+00 795.0
39 TraesCS7B01G138200 chr4D 96.491 57 2 0 7346 7402 335044914 335044970 2.790000e-15 95.3
40 TraesCS7B01G138200 chr4D 96.154 52 2 0 7216 7267 234410956 234410905 1.680000e-12 86.1
41 TraesCS7B01G138200 chr4D 94.444 54 3 0 7214 7267 54683258 54683311 6.030000e-12 84.2
42 TraesCS7B01G138200 chr4B 84.420 828 104 20 1 809 46975960 46975139 0.000000e+00 791.0
43 TraesCS7B01G138200 chr4B 98.000 50 1 0 7348 7397 379084931 379084980 4.660000e-13 87.9
44 TraesCS7B01G138200 chr3D 91.447 152 7 1 1 146 379231466 379231315 4.440000e-48 204.0
45 TraesCS7B01G138200 chr3D 94.545 55 2 1 7213 7267 448433707 448433654 6.030000e-12 84.2
46 TraesCS7B01G138200 chr6B 98.851 87 1 0 7262 7348 705518147 705518233 1.260000e-33 156.0
47 TraesCS7B01G138200 chr6B 76.712 146 30 4 6331 6474 702828229 702828372 2.810000e-10 78.7
48 TraesCS7B01G138200 chr5A 74.083 436 86 21 2158 2584 484083349 484082932 4.530000e-33 154.0
49 TraesCS7B01G138200 chr5A 94.915 59 3 0 7346 7404 3702088 3702030 1.000000e-14 93.5
50 TraesCS7B01G138200 chr1B 77.483 151 28 6 6327 6474 655100496 655100349 1.680000e-12 86.1
51 TraesCS7B01G138200 chr6A 76.027 146 31 4 6331 6474 607954896 607955039 1.310000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G138200 chr7B 173858528 173867903 9375 False 17315.000000 17315 100.000000 1 9376 1 chr7B.!!$F1 9375
1 TraesCS7B01G138200 chr7B 161241027 161241817 790 True 623.000000 623 81.579000 2 809 1 chr7B.!!$R1 807
2 TraesCS7B01G138200 chr7D 224050034 224058510 8476 False 4153.666667 8447 92.799667 810 9376 3 chr7D.!!$F2 8566
3 TraesCS7B01G138200 chr7A 237516575 237525072 8497 True 3203.250000 6913 93.494250 810 9376 4 chr7A.!!$R2 8566
4 TraesCS7B01G138200 chr3B 617687262 617688095 833 False 1029.000000 1029 89.486000 1 809 1 chr3B.!!$F1 808
5 TraesCS7B01G138200 chr2B 444550853 444551685 832 True 1013.000000 1013 89.115000 1 810 1 chr2B.!!$R2 809
6 TraesCS7B01G138200 chr2B 25269586 25270291 705 True 656.000000 656 83.776000 111 811 1 chr2B.!!$R1 700
7 TraesCS7B01G138200 chr5D 385125947 385126789 842 False 989.000000 989 88.507000 1 810 1 chr5D.!!$F2 809
8 TraesCS7B01G138200 chr4A 710817773 710818607 834 False 977.000000 977 88.333000 1 812 1 chr4A.!!$F1 811
9 TraesCS7B01G138200 chr6D 78029061 78029878 817 True 948.000000 948 87.952000 1 809 1 chr6D.!!$R1 808
10 TraesCS7B01G138200 chr3A 746547136 746547960 824 True 894.000000 894 86.707000 1 809 1 chr3A.!!$R1 808
11 TraesCS7B01G138200 chr1D 379574881 379575711 830 True 833.000000 833 85.305000 1 810 1 chr1D.!!$R2 809
12 TraesCS7B01G138200 chr1D 296972422 296973224 802 False 669.000000 669 82.360000 1 809 1 chr1D.!!$F1 808
13 TraesCS7B01G138200 chr5B 456986124 456986930 806 True 802.000000 802 84.775000 1 812 1 chr5B.!!$R1 811
14 TraesCS7B01G138200 chr5B 613180944 613181505 561 True 564.000000 564 85.420000 2 559 1 chr5B.!!$R3 557
15 TraesCS7B01G138200 chr4D 483612720 483613551 831 True 795.000000 795 84.487000 1 809 1 chr4D.!!$R2 808
16 TraesCS7B01G138200 chr4B 46975139 46975960 821 True 791.000000 791 84.420000 1 809 1 chr4B.!!$R1 808

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
873 973 0.100861 GCTACCGTCACCTAGCTGAC 59.899 60.0 7.97 7.97 37.75 3.51 F
1588 1712 0.034960 TAGGTGCAAATTGGGCGCTA 60.035 50.0 7.64 0.00 41.36 4.26 F
2150 2284 0.114168 TGGGGTTTGTGGAGAATGGG 59.886 55.0 0.00 0.00 0.00 4.00 F
3691 4022 0.469917 AGTCCAAGGCGACCATATGG 59.530 55.0 20.68 20.68 42.17 2.74 F
5000 5331 0.943673 CACCACTTTGTCGCACATGA 59.056 50.0 0.00 0.00 0.00 3.07 F
6531 6868 0.037303 ACTTGATCCTGGCACACTGG 59.963 55.0 0.00 0.00 39.40 4.00 F
7233 7603 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.00 0.00 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1836 1970 0.249238 GCACATTCAACGGGCAACAA 60.249 50.000 0.00 0.0 39.74 2.83 R
3478 3809 1.068679 GCTCTGCTTTTCTTGCTGTCC 60.069 52.381 0.00 0.0 0.00 4.02 R
3898 4229 0.331278 CCACCCAAAGCATACCCAGA 59.669 55.000 0.00 0.0 0.00 3.86 R
5385 5716 1.818060 TGCCACTTGTTCATGCATACC 59.182 47.619 0.00 0.0 0.00 2.73 R
6933 7303 0.319405 AACATGCTGCAAAAGAGCCC 59.681 50.000 6.36 0.0 35.43 5.19 R
7411 7781 0.036294 GACCCTGTACCTTGGAGCAC 60.036 60.000 0.00 0.0 0.00 4.40 R
8412 8965 1.818060 CCCAATCCAATTTCAGCGTGA 59.182 47.619 0.00 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
152 174 5.181245 TGCTATTTGGTTGAACTTGTCTAGC 59.819 40.000 0.00 3.46 0.00 3.42
157 179 2.876550 GGTTGAACTTGTCTAGCGGTTT 59.123 45.455 0.00 0.00 0.00 3.27
183 228 6.539464 TGAAACTACGTGGAACTATGTGTTTT 59.461 34.615 5.70 0.00 39.30 2.43
208 253 4.782019 TTTGTGGATCTATGTGTTTGCC 57.218 40.909 0.00 0.00 0.00 4.52
350 433 5.576384 TGTGACATTTTTGTGAAACTTGCTC 59.424 36.000 0.00 0.00 38.04 4.26
369 452 8.152898 ACTTGCTCTGATATTGCTGTCATATTA 58.847 33.333 0.00 0.00 0.00 0.98
398 481 5.750067 TGAAAAGAAGCAAGCAAATGAACTC 59.250 36.000 0.00 0.00 0.00 3.01
404 488 4.122046 AGCAAGCAAATGAACTCAAAACC 58.878 39.130 0.00 0.00 0.00 3.27
427 511 1.125711 AAAGCACAGGACCCTACCGT 61.126 55.000 0.00 0.00 34.73 4.83
431 515 0.611062 CACAGGACCCTACCGTCAGA 60.611 60.000 0.00 0.00 34.24 3.27
434 518 0.256464 AGGACCCTACCGTCAGAGAG 59.744 60.000 0.00 0.00 34.24 3.20
450 534 4.400251 AGCCTGGCGGTAGGGTCT 62.400 66.667 13.96 0.00 44.96 3.85
462 546 2.184579 GGGTCTCACAGCCTACGC 59.815 66.667 0.00 0.00 39.90 4.42
464 548 2.646175 GGTCTCACAGCCTACGCCA 61.646 63.158 0.00 0.00 34.57 5.69
521 611 5.569413 CCCTTGCATATTTCGTTACAGAAC 58.431 41.667 0.00 0.00 0.00 3.01
567 658 4.715130 TACCGCCAGAGCCCCTGT 62.715 66.667 3.45 0.00 41.33 4.00
575 666 2.043248 GAGCCCCTGTCGGTAGGA 60.043 66.667 7.36 0.00 40.42 2.94
585 676 3.014304 TGTCGGTAGGATTAGACAGCT 57.986 47.619 0.00 0.00 38.52 4.24
622 716 2.895404 GGCGATAGGGTACTTATCCACA 59.105 50.000 10.38 0.00 0.00 4.17
814 914 5.767816 AAACACGAAATTTTGCCTAGAGT 57.232 34.783 5.27 0.00 0.00 3.24
843 943 1.591183 GGGTGGCCGTAACGTCTAA 59.409 57.895 0.00 0.00 0.00 2.10
844 944 0.459063 GGGTGGCCGTAACGTCTAAG 60.459 60.000 0.00 0.00 0.00 2.18
845 945 1.080435 GGTGGCCGTAACGTCTAAGC 61.080 60.000 0.00 0.00 0.00 3.09
870 970 1.038130 CCTGCTACCGTCACCTAGCT 61.038 60.000 0.00 0.00 36.98 3.32
871 971 0.101399 CTGCTACCGTCACCTAGCTG 59.899 60.000 0.00 0.00 36.98 4.24
872 972 0.323087 TGCTACCGTCACCTAGCTGA 60.323 55.000 0.00 0.00 36.98 4.26
873 973 0.100861 GCTACCGTCACCTAGCTGAC 59.899 60.000 7.97 7.97 37.75 3.51
874 974 0.739561 CTACCGTCACCTAGCTGACC 59.260 60.000 11.72 0.00 37.83 4.02
875 975 0.682209 TACCGTCACCTAGCTGACCC 60.682 60.000 11.72 0.00 37.83 4.46
876 976 2.490217 CGTCACCTAGCTGACCCG 59.510 66.667 11.72 0.00 37.83 5.28
877 977 2.893398 GTCACCTAGCTGACCCGG 59.107 66.667 6.90 0.00 35.44 5.73
953 1054 2.034066 CACCACCACCGCATCCTT 59.966 61.111 0.00 0.00 0.00 3.36
1076 1177 1.210155 CGCCCGCAAAAGAGAAAGG 59.790 57.895 0.00 0.00 0.00 3.11
1146 1247 2.802106 CGACGAGAGGGAGAAGGC 59.198 66.667 0.00 0.00 0.00 4.35
1326 1428 1.063114 AGGCGTCAAGGTACCTATCCT 60.063 52.381 16.67 13.74 36.81 3.24
1332 1434 4.276431 CGTCAAGGTACCTATCCTTCTCTC 59.724 50.000 16.67 0.00 42.57 3.20
1335 1437 5.193930 TCAAGGTACCTATCCTTCTCTCTCA 59.806 44.000 16.67 0.00 42.57 3.27
1336 1438 5.056553 AGGTACCTATCCTTCTCTCTCAC 57.943 47.826 14.41 0.00 30.18 3.51
1340 1442 5.048846 ACCTATCCTTCTCTCTCACTCTC 57.951 47.826 0.00 0.00 0.00 3.20
1341 1443 4.141251 ACCTATCCTTCTCTCTCACTCTCC 60.141 50.000 0.00 0.00 0.00 3.71
1342 1444 2.411628 TCCTTCTCTCTCACTCTCCG 57.588 55.000 0.00 0.00 0.00 4.63
1343 1445 0.738389 CCTTCTCTCTCACTCTCCGC 59.262 60.000 0.00 0.00 0.00 5.54
1356 1458 1.414181 CTCTCCGCTCTCTCTCTCTCT 59.586 57.143 0.00 0.00 0.00 3.10
1391 1515 1.853963 AATCAGGCGACCTCACTAGT 58.146 50.000 0.00 0.00 0.00 2.57
1428 1552 0.106419 AAAAGGGCTCACCGGAACAA 60.106 50.000 9.46 0.00 46.96 2.83
1471 1595 3.426159 CGATTTTGTTGTGATTCGGAGGG 60.426 47.826 0.00 0.00 0.00 4.30
1493 1617 3.467226 GGATTGAGGGCGTCGGGA 61.467 66.667 2.41 0.00 0.00 5.14
1516 1640 2.916934 TGGCCTAACTTTATGTCCAGGT 59.083 45.455 3.32 0.00 34.82 4.00
1517 1641 3.279434 GGCCTAACTTTATGTCCAGGTG 58.721 50.000 0.00 0.00 34.82 4.00
1518 1642 3.308188 GGCCTAACTTTATGTCCAGGTGT 60.308 47.826 0.00 0.00 34.82 4.16
1519 1643 4.332828 GCCTAACTTTATGTCCAGGTGTT 58.667 43.478 0.00 0.00 34.82 3.32
1520 1644 4.765339 GCCTAACTTTATGTCCAGGTGTTT 59.235 41.667 0.00 0.00 34.82 2.83
1521 1645 5.106277 GCCTAACTTTATGTCCAGGTGTTTC 60.106 44.000 0.00 0.00 34.82 2.78
1522 1646 6.001460 CCTAACTTTATGTCCAGGTGTTTCA 58.999 40.000 0.00 0.00 0.00 2.69
1523 1647 6.659242 CCTAACTTTATGTCCAGGTGTTTCAT 59.341 38.462 0.00 0.00 0.00 2.57
1531 1655 5.380900 TGTCCAGGTGTTTCATGTTTGATA 58.619 37.500 0.00 0.00 0.00 2.15
1551 1675 3.885484 AGATTTATGCCTGATTTCGCG 57.115 42.857 0.00 0.00 0.00 5.87
1588 1712 0.034960 TAGGTGCAAATTGGGCGCTA 60.035 50.000 7.64 0.00 41.36 4.26
1589 1713 1.139520 GGTGCAAATTGGGCGCTAG 59.860 57.895 7.64 0.00 41.36 3.42
1590 1714 1.595093 GGTGCAAATTGGGCGCTAGT 61.595 55.000 7.64 0.00 41.36 2.57
1591 1715 0.456653 GTGCAAATTGGGCGCTAGTG 60.457 55.000 7.64 0.00 38.67 2.74
1592 1716 0.607762 TGCAAATTGGGCGCTAGTGA 60.608 50.000 7.64 0.00 0.00 3.41
1593 1717 0.740737 GCAAATTGGGCGCTAGTGAT 59.259 50.000 7.64 0.00 0.00 3.06
1594 1718 1.534595 GCAAATTGGGCGCTAGTGATG 60.535 52.381 7.64 1.68 0.00 3.07
1595 1719 0.740737 AAATTGGGCGCTAGTGATGC 59.259 50.000 7.64 0.00 0.00 3.91
1624 1748 3.243704 GCTTTGGAATTGCTGTGTGGTTA 60.244 43.478 0.00 0.00 0.00 2.85
1649 1773 4.163458 TGCAAGCATATAATCCATTGCG 57.837 40.909 0.00 0.00 44.49 4.85
1650 1774 2.919229 GCAAGCATATAATCCATTGCGC 59.081 45.455 0.00 0.00 40.00 6.09
1651 1775 3.165890 CAAGCATATAATCCATTGCGCG 58.834 45.455 0.00 0.00 40.00 6.86
1652 1776 2.426522 AGCATATAATCCATTGCGCGT 58.573 42.857 8.43 0.00 40.00 6.01
1665 1789 3.777925 CGCGTGGCTTCTCGTTGG 61.778 66.667 0.00 0.00 0.00 3.77
1683 1807 5.184864 TCGTTGGCAAGTCATTTCCATTTAT 59.815 36.000 0.00 0.00 0.00 1.40
1689 1813 5.750067 GCAAGTCATTTCCATTTATCGCAAT 59.250 36.000 0.00 0.00 0.00 3.56
1714 1838 8.789825 TTTATAATGCCACATTTTGCATCTTT 57.210 26.923 0.00 0.00 46.97 2.52
1717 1841 4.069300 TGCCACATTTTGCATCTTTGAA 57.931 36.364 0.00 0.00 31.31 2.69
1743 1874 1.737793 CCGAGGCTTGGTACATGTTTC 59.262 52.381 13.06 0.00 39.30 2.78
1747 1878 1.199097 GGCTTGGTACATGTTTCGGTG 59.801 52.381 2.30 0.00 39.30 4.94
1769 1903 6.151144 GGTGGTCTTCTTGTATGCTGTTATTT 59.849 38.462 0.00 0.00 0.00 1.40
1807 1941 7.575414 TTCCTAACATGAAACTGCAACTTTA 57.425 32.000 0.00 0.00 0.00 1.85
1812 1946 7.992180 AACATGAAACTGCAACTTTAGAAAG 57.008 32.000 0.00 0.37 41.73 2.62
1852 1986 4.414852 CTTATCTTGTTGCCCGTTGAATG 58.585 43.478 0.00 0.00 0.00 2.67
1878 2012 4.638421 CCAAATCGGCAAATCCAGTTACTA 59.362 41.667 0.00 0.00 34.01 1.82
1922 2056 6.566197 AAAAGTTGATCTTGAACAGCTAGG 57.434 37.500 0.00 0.00 36.40 3.02
1923 2057 3.604582 AGTTGATCTTGAACAGCTAGGC 58.395 45.455 0.00 0.00 0.00 3.93
1924 2058 3.262915 AGTTGATCTTGAACAGCTAGGCT 59.737 43.478 0.00 0.00 40.77 4.58
1925 2059 4.467795 AGTTGATCTTGAACAGCTAGGCTA 59.532 41.667 0.00 0.00 36.40 3.93
1926 2060 4.662468 TGATCTTGAACAGCTAGGCTAG 57.338 45.455 17.33 17.33 36.40 3.42
1927 2061 3.386078 TGATCTTGAACAGCTAGGCTAGG 59.614 47.826 22.40 9.69 36.40 3.02
1928 2062 3.101643 TCTTGAACAGCTAGGCTAGGA 57.898 47.619 22.40 6.25 36.40 2.94
1929 2063 3.441101 TCTTGAACAGCTAGGCTAGGAA 58.559 45.455 22.40 0.00 36.40 3.36
1930 2064 3.838317 TCTTGAACAGCTAGGCTAGGAAA 59.162 43.478 22.40 4.95 36.40 3.13
1931 2065 4.286032 TCTTGAACAGCTAGGCTAGGAAAA 59.714 41.667 22.40 4.66 36.40 2.29
1932 2066 4.844349 TGAACAGCTAGGCTAGGAAAAT 57.156 40.909 22.40 0.00 36.40 1.82
1933 2067 4.517285 TGAACAGCTAGGCTAGGAAAATG 58.483 43.478 22.40 0.00 36.40 2.32
1934 2068 4.225042 TGAACAGCTAGGCTAGGAAAATGA 59.775 41.667 22.40 0.00 36.40 2.57
1935 2069 5.104360 TGAACAGCTAGGCTAGGAAAATGAT 60.104 40.000 22.40 0.00 36.40 2.45
1936 2070 6.099701 TGAACAGCTAGGCTAGGAAAATGATA 59.900 38.462 22.40 0.00 36.40 2.15
1937 2071 6.107901 ACAGCTAGGCTAGGAAAATGATAG 57.892 41.667 22.40 0.00 36.40 2.08
1938 2072 5.841237 ACAGCTAGGCTAGGAAAATGATAGA 59.159 40.000 22.40 0.00 36.40 1.98
1939 2073 6.327626 ACAGCTAGGCTAGGAAAATGATAGAA 59.672 38.462 22.40 0.00 36.40 2.10
1940 2074 7.017056 ACAGCTAGGCTAGGAAAATGATAGAAT 59.983 37.037 22.40 0.00 36.40 2.40
1941 2075 8.535335 CAGCTAGGCTAGGAAAATGATAGAATA 58.465 37.037 22.40 0.00 36.40 1.75
1942 2076 8.757877 AGCTAGGCTAGGAAAATGATAGAATAG 58.242 37.037 22.40 0.00 36.99 1.73
1943 2077 7.984617 GCTAGGCTAGGAAAATGATAGAATAGG 59.015 40.741 22.40 0.00 0.00 2.57
1944 2078 9.261035 CTAGGCTAGGAAAATGATAGAATAGGA 57.739 37.037 13.92 0.00 0.00 2.94
1945 2079 8.511748 AGGCTAGGAAAATGATAGAATAGGAA 57.488 34.615 0.00 0.00 0.00 3.36
1946 2080 8.379331 AGGCTAGGAAAATGATAGAATAGGAAC 58.621 37.037 0.00 0.00 0.00 3.62
1947 2081 7.332182 GGCTAGGAAAATGATAGAATAGGAACG 59.668 40.741 0.00 0.00 0.00 3.95
1948 2082 7.148557 GCTAGGAAAATGATAGAATAGGAACGC 60.149 40.741 0.00 0.00 0.00 4.84
1961 2095 5.986004 ATAGGAACGCAACTTGCTAATAC 57.014 39.130 11.93 0.00 42.25 1.89
2087 2221 2.378547 TGGTGGCTGGACTAAGGATTTT 59.621 45.455 0.00 0.00 0.00 1.82
2150 2284 0.114168 TGGGGTTTGTGGAGAATGGG 59.886 55.000 0.00 0.00 0.00 4.00
2274 2408 1.615107 GCGGAGTGGAAACTTCGACG 61.615 60.000 10.65 0.00 41.01 5.12
2280 2414 0.599204 TGGAAACTTCGACGCCAGTC 60.599 55.000 0.62 0.00 43.72 3.51
2315 2449 0.767375 ATGTGACTGGCAGTTCCACT 59.233 50.000 28.74 17.39 40.72 4.00
2471 2605 2.307098 AGAATGGAGAGTGGTTTCCCAG 59.693 50.000 0.00 0.00 42.94 4.45
2501 2635 7.945134 ACAGCAATAAAGGCTCCTTATTTATG 58.055 34.615 0.98 6.46 40.23 1.90
2611 2745 4.255833 TGAATCTTGTGGATTTTGTGCC 57.744 40.909 0.00 0.00 43.90 5.01
2626 2760 2.110213 GCCGGTGAGTGTTCCACA 59.890 61.111 1.90 0.00 36.74 4.17
2696 2830 3.207669 CGCTCAGGGATGCTTGGC 61.208 66.667 0.00 0.00 0.00 4.52
2701 2835 1.210204 TCAGGGATGCTTGGCCTCTT 61.210 55.000 3.32 0.00 0.00 2.85
2702 2836 0.548031 CAGGGATGCTTGGCCTCTTA 59.452 55.000 3.32 0.00 0.00 2.10
2703 2837 0.548510 AGGGATGCTTGGCCTCTTAC 59.451 55.000 3.32 0.00 0.00 2.34
2705 2839 0.548510 GGATGCTTGGCCTCTTACCT 59.451 55.000 3.32 0.00 0.00 3.08
2706 2840 1.673168 GATGCTTGGCCTCTTACCTG 58.327 55.000 3.32 0.00 0.00 4.00
2708 2842 1.301293 GCTTGGCCTCTTACCTGCT 59.699 57.895 3.32 0.00 0.00 4.24
2710 2844 1.457346 CTTGGCCTCTTACCTGCTTG 58.543 55.000 3.32 0.00 0.00 4.01
2711 2845 1.003580 CTTGGCCTCTTACCTGCTTGA 59.996 52.381 3.32 0.00 0.00 3.02
2712 2846 1.064003 TGGCCTCTTACCTGCTTGAA 58.936 50.000 3.32 0.00 0.00 2.69
2723 2857 7.548097 TCTTACCTGCTTGAATGAACTAGTAG 58.452 38.462 0.00 0.00 0.00 2.57
2727 2861 7.324178 ACCTGCTTGAATGAACTAGTAGTAAG 58.676 38.462 2.50 3.74 0.00 2.34
2769 2903 9.754382 AAGTATTAATGCAATTGCTTTCCTATG 57.246 29.630 28.65 0.00 42.66 2.23
2793 2927 8.121305 TGTTAAGATGCCATCAAGTTTATTGT 57.879 30.769 7.56 0.00 0.00 2.71
2813 2947 5.772825 TGTAAGAAGTTGCAAATGAGCTT 57.227 34.783 0.00 7.85 34.99 3.74
2833 2967 7.442364 TGAGCTTCCTTGTGCTTATATCAATAC 59.558 37.037 0.00 0.00 39.91 1.89
2861 2995 6.652062 GCCAATCTTTCAACTCCAATTTGAAT 59.348 34.615 0.00 0.00 41.45 2.57
2907 3041 2.682155 TGGTTGGCTTTTGTTTGGAC 57.318 45.000 0.00 0.00 0.00 4.02
2918 3052 7.036829 GGCTTTTGTTTGGACAGTTAAAGTAA 58.963 34.615 0.00 0.00 35.24 2.24
2925 3059 9.126151 TGTTTGGACAGTTAAAGTAATCATTGA 57.874 29.630 0.00 0.00 0.00 2.57
2956 3090 9.809096 GCTAATCTAGTAATCTTGCTGCATATA 57.191 33.333 1.84 0.00 0.00 0.86
3115 3446 3.127548 AGTTACATTCTTTCCATGCTGCG 59.872 43.478 0.00 0.00 0.00 5.18
3285 3616 4.225042 TCAAGTAGCAGTATTGGTGATGGT 59.775 41.667 0.00 0.00 36.27 3.55
3478 3809 5.805728 ACCCTAGTGTACAAATTTCTGAGG 58.194 41.667 0.00 0.00 0.00 3.86
3479 3810 5.186198 CCCTAGTGTACAAATTTCTGAGGG 58.814 45.833 0.00 4.27 34.32 4.30
3605 3936 7.775053 ATTTGAAGTTAAGTTTGGATAGCCA 57.225 32.000 0.00 0.00 44.17 4.75
3691 4022 0.469917 AGTCCAAGGCGACCATATGG 59.530 55.000 20.68 20.68 42.17 2.74
3742 4073 4.382470 CCCATGTTCCTTTTGTTGACAACA 60.382 41.667 17.02 17.02 40.21 3.33
3898 4229 6.663093 TGTATTGGCAAATCCTTATGTGACTT 59.337 34.615 3.01 0.00 28.46 3.01
3922 4253 2.243810 GGTATGCTTTGGGTGGTTCAA 58.756 47.619 0.00 0.00 0.00 2.69
3945 4276 2.537633 TCCCACCCGTTATGACTAGT 57.462 50.000 0.00 0.00 0.00 2.57
4046 4377 3.054802 CCTTCAGCAGGGAATCTTACTGT 60.055 47.826 0.00 0.00 39.39 3.55
4089 4420 6.554605 AGCCATATAAAATGTATGGGCAACTT 59.445 34.615 13.05 0.00 45.65 2.66
4110 4441 3.070576 GTTCCCATGCAGCCACCC 61.071 66.667 0.00 0.00 0.00 4.61
4245 4576 7.384439 TGCTGATAATTTTGATCCACGTAAA 57.616 32.000 0.00 0.00 0.00 2.01
4269 4600 7.678947 ATTATTTCCTCAAGCTCAATATCCG 57.321 36.000 0.00 0.00 0.00 4.18
4360 4691 6.576185 ACTGTTCCAAATTATCATGGCATTC 58.424 36.000 0.00 0.00 36.62 2.67
4439 4770 3.245766 CCTTTCTCTGGAATTTCCCCCTT 60.246 47.826 12.90 0.00 35.03 3.95
4612 4943 6.463614 GGTTGAGCTATCTGATATCACAGGTT 60.464 42.308 0.00 0.00 38.31 3.50
4920 5251 8.025445 GCTTCATCTTTAATGACTGATGTGTTT 58.975 33.333 0.00 0.00 37.93 2.83
4950 5281 3.270027 TGTGATCCAAAAGGTATGCTCG 58.730 45.455 0.00 0.00 0.00 5.03
4983 5314 2.056094 GTGGAGCAAATTGTCTGCAC 57.944 50.000 19.19 19.19 42.67 4.57
5000 5331 0.943673 CACCACTTTGTCGCACATGA 59.056 50.000 0.00 0.00 0.00 3.07
5136 5467 2.440627 AGCCTTCAGATGTATGGATGCA 59.559 45.455 0.00 0.00 0.00 3.96
5158 5489 6.874134 TGCAGAGTAATTCAAAAGGTACTCTC 59.126 38.462 8.81 5.98 46.20 3.20
5165 5496 7.971183 AATTCAAAAGGTACTCTCACTCTTC 57.029 36.000 0.00 0.00 38.49 2.87
5213 5544 4.630069 CCCGATCTCGTTCTGTGTTAATTT 59.370 41.667 0.00 0.00 37.74 1.82
5277 5608 8.924511 ATTATGTATCTAGTTTTCCCCATGTG 57.075 34.615 0.00 0.00 0.00 3.21
5325 5656 7.937649 ACTTGGGATGTTCACTTAAAAGTTAC 58.062 34.615 0.00 0.00 37.08 2.50
5385 5716 9.987272 TTATCATACATTCTTGATGGTACTCTG 57.013 33.333 0.00 0.00 40.21 3.35
5490 5822 3.788227 ACCTAGATTTTGTGTCTGGCA 57.212 42.857 0.00 0.00 0.00 4.92
5491 5823 4.098914 ACCTAGATTTTGTGTCTGGCAA 57.901 40.909 0.00 0.00 0.00 4.52
5492 5824 3.821033 ACCTAGATTTTGTGTCTGGCAAC 59.179 43.478 0.00 0.00 0.00 4.17
5493 5825 4.074970 CCTAGATTTTGTGTCTGGCAACT 58.925 43.478 0.00 0.00 37.61 3.16
5534 5866 7.573968 CCAAATTACTCTTTGGCTAGCTTAT 57.426 36.000 15.72 0.00 46.25 1.73
5535 5867 8.000780 CCAAATTACTCTTTGGCTAGCTTATT 57.999 34.615 15.72 0.00 46.25 1.40
5536 5868 8.470002 CCAAATTACTCTTTGGCTAGCTTATTT 58.530 33.333 15.72 2.16 46.25 1.40
5545 5877 5.799827 TGGCTAGCTTATTTGGTTTGTTT 57.200 34.783 15.72 0.00 0.00 2.83
5627 5959 4.292599 CACCATTTCAGTGTGTTGACATG 58.707 43.478 0.00 0.00 35.84 3.21
5660 5992 3.897505 GTTTATGGGCCAAGGCTGATATT 59.102 43.478 11.89 0.00 41.60 1.28
5661 5993 2.005370 ATGGGCCAAGGCTGATATTG 57.995 50.000 11.89 0.00 41.60 1.90
5710 6042 6.656314 TGCCTTGTAAATACAATAGTGACG 57.344 37.500 6.47 0.00 44.34 4.35
5714 6046 8.062448 GCCTTGTAAATACAATAGTGACGATTC 58.938 37.037 6.47 0.00 44.34 2.52
5740 6073 8.839310 CTATGTTAGGATAAGGATTTGTCAGG 57.161 38.462 0.00 0.00 0.00 3.86
5795 6128 2.567169 TGTGGATCAAGAGTGTACCCTG 59.433 50.000 0.00 0.00 0.00 4.45
5809 6142 5.361285 AGTGTACCCTGTGAGATTAAGCTAG 59.639 44.000 0.00 0.00 0.00 3.42
5838 6171 7.598118 CACTAGATCATCTGACATGTAACATCC 59.402 40.741 0.00 0.00 0.00 3.51
5852 6185 6.928979 TGTAACATCCGTTAAATATGGTGG 57.071 37.500 0.00 0.00 39.29 4.61
5911 6244 5.574443 GTGCAAAGAGAGGTAAATGCAATTC 59.426 40.000 0.00 0.00 44.39 2.17
6211 6548 5.143369 TCATAGTATCTGATGTGTCCTGCT 58.857 41.667 0.00 0.00 0.00 4.24
6217 6554 4.128925 TCTGATGTGTCCTGCTGTTATC 57.871 45.455 0.00 0.00 0.00 1.75
6357 6694 4.931002 GTGACCAAAATGGGAATCATGTTG 59.069 41.667 0.87 2.76 46.01 3.33
6480 6817 3.142951 CGTGTTATTCAGGTGGGTTCAA 58.857 45.455 0.00 0.00 0.00 2.69
6497 6834 6.071952 TGGGTTCAAACTTCAGAATAATGCTC 60.072 38.462 0.00 0.00 0.00 4.26
6502 6839 8.893219 TCAAACTTCAGAATAATGCTCGATAT 57.107 30.769 0.00 0.00 0.00 1.63
6523 6860 7.360691 CGATATGAATTTGCTACTTGATCCTGG 60.361 40.741 0.00 0.00 0.00 4.45
6531 6868 0.037303 ACTTGATCCTGGCACACTGG 59.963 55.000 0.00 0.00 39.40 4.00
6552 6889 4.202609 TGGCTTTCTTTCTCCCTTCAATCT 60.203 41.667 0.00 0.00 0.00 2.40
6553 6890 4.769488 GGCTTTCTTTCTCCCTTCAATCTT 59.231 41.667 0.00 0.00 0.00 2.40
6561 6898 7.661847 TCTTTCTCCCTTCAATCTTTACACTTC 59.338 37.037 0.00 0.00 0.00 3.01
6743 7080 6.371809 TTCTAAAAAGTGCACAGTAGTTGG 57.628 37.500 21.04 7.59 0.00 3.77
6744 7081 3.436700 AAAAAGTGCACAGTAGTTGGC 57.563 42.857 21.04 0.00 0.00 4.52
6745 7082 1.318576 AAAGTGCACAGTAGTTGGCC 58.681 50.000 21.04 0.00 0.00 5.36
6746 7083 0.182537 AAGTGCACAGTAGTTGGCCA 59.817 50.000 21.04 0.00 0.00 5.36
6747 7084 0.535102 AGTGCACAGTAGTTGGCCAC 60.535 55.000 21.04 0.00 34.22 5.01
6748 7085 0.817634 GTGCACAGTAGTTGGCCACA 60.818 55.000 13.17 0.00 34.21 4.17
6749 7086 0.534877 TGCACAGTAGTTGGCCACAG 60.535 55.000 3.88 0.00 0.00 3.66
6750 7087 0.535102 GCACAGTAGTTGGCCACAGT 60.535 55.000 3.88 2.40 0.00 3.55
6751 7088 1.229428 CACAGTAGTTGGCCACAGTG 58.771 55.000 3.88 9.76 0.00 3.66
6752 7089 0.535102 ACAGTAGTTGGCCACAGTGC 60.535 55.000 3.88 3.76 0.00 4.40
6753 7090 0.250467 CAGTAGTTGGCCACAGTGCT 60.250 55.000 3.88 6.24 0.00 4.40
6810 7150 6.318648 ACACAAAATACATCGCCATTATGACT 59.681 34.615 0.00 0.00 0.00 3.41
6871 7241 7.012607 TGGAGTTCTATGATACCAGATGATGA 58.987 38.462 0.00 0.00 0.00 2.92
6872 7242 7.677319 TGGAGTTCTATGATACCAGATGATGAT 59.323 37.037 0.00 0.00 0.00 2.45
6873 7243 7.980662 GGAGTTCTATGATACCAGATGATGATG 59.019 40.741 0.00 0.00 0.00 3.07
6874 7244 8.433249 AGTTCTATGATACCAGATGATGATGT 57.567 34.615 0.00 0.00 0.00 3.06
6875 7245 8.312564 AGTTCTATGATACCAGATGATGATGTG 58.687 37.037 0.00 0.00 0.00 3.21
6876 7246 8.309656 GTTCTATGATACCAGATGATGATGTGA 58.690 37.037 0.00 0.00 0.00 3.58
6877 7247 8.064336 TCTATGATACCAGATGATGATGTGAG 57.936 38.462 0.00 0.00 0.00 3.51
6878 7248 6.683312 ATGATACCAGATGATGATGTGAGT 57.317 37.500 0.00 0.00 0.00 3.41
6880 7250 5.599656 TGATACCAGATGATGATGTGAGTGA 59.400 40.000 0.00 0.00 0.00 3.41
6881 7251 4.831674 ACCAGATGATGATGTGAGTGAA 57.168 40.909 0.00 0.00 0.00 3.18
6882 7252 4.767478 ACCAGATGATGATGTGAGTGAAG 58.233 43.478 0.00 0.00 0.00 3.02
6883 7253 4.224594 ACCAGATGATGATGTGAGTGAAGT 59.775 41.667 0.00 0.00 0.00 3.01
6884 7254 5.423290 ACCAGATGATGATGTGAGTGAAGTA 59.577 40.000 0.00 0.00 0.00 2.24
6906 7276 2.618053 CCCTTGGCTACTTTACGTCAG 58.382 52.381 0.00 0.00 0.00 3.51
6997 7367 8.469200 CATGAAAGGGCTCAAATTATCAGTAAA 58.531 33.333 0.00 0.00 0.00 2.01
7063 7433 8.025445 GCATCAAATGTGATAGAGAAGTGTTTT 58.975 33.333 0.00 0.00 42.88 2.43
7072 7442 6.430925 TGATAGAGAAGTGTTTTCAACATGGG 59.569 38.462 0.00 0.00 44.35 4.00
7164 7534 7.148738 GCTGGTATGTATGATAATTCGACACTG 60.149 40.741 0.00 0.00 0.00 3.66
7171 7541 3.861113 TGATAATTCGACACTGTAACGCC 59.139 43.478 0.00 0.00 0.00 5.68
7188 7558 1.134946 CGCCATGTTTCCATCCCTTTC 59.865 52.381 0.00 0.00 0.00 2.62
7189 7559 2.460669 GCCATGTTTCCATCCCTTTCT 58.539 47.619 0.00 0.00 0.00 2.52
7192 7562 4.824289 CCATGTTTCCATCCCTTTCTTTG 58.176 43.478 0.00 0.00 0.00 2.77
7194 7564 3.303938 TGTTTCCATCCCTTTCTTTGCA 58.696 40.909 0.00 0.00 0.00 4.08
7195 7565 3.903090 TGTTTCCATCCCTTTCTTTGCAT 59.097 39.130 0.00 0.00 0.00 3.96
7224 7594 3.975168 TTTTGCTGGTAGTACTCCCTC 57.025 47.619 6.02 0.00 0.00 4.30
7225 7595 1.861982 TTGCTGGTAGTACTCCCTCC 58.138 55.000 6.02 3.17 0.00 4.30
7226 7596 0.395311 TGCTGGTAGTACTCCCTCCG 60.395 60.000 6.02 0.00 0.00 4.63
7227 7597 0.395448 GCTGGTAGTACTCCCTCCGT 60.395 60.000 6.02 0.00 0.00 4.69
7228 7598 1.677942 CTGGTAGTACTCCCTCCGTC 58.322 60.000 6.02 0.00 0.00 4.79
7229 7599 0.257039 TGGTAGTACTCCCTCCGTCC 59.743 60.000 6.02 0.00 0.00 4.79
7230 7600 0.467106 GGTAGTACTCCCTCCGTCCC 60.467 65.000 0.00 0.00 0.00 4.46
7231 7601 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
7232 7602 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
7233 7603 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
7234 7604 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
7235 7605 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
7236 7606 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
7237 7607 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
7238 7608 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
7239 7609 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
7240 7610 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
7241 7611 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
7242 7612 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
7243 7613 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
7244 7614 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
7245 7615 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
7246 7616 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
7247 7617 5.702209 TCCGTCCCAAAATAAGTGTCTTAAC 59.298 40.000 0.00 0.00 0.00 2.01
7248 7618 5.106436 CCGTCCCAAAATAAGTGTCTTAACC 60.106 44.000 0.00 0.00 0.00 2.85
7249 7619 5.704053 CGTCCCAAAATAAGTGTCTTAACCT 59.296 40.000 0.00 0.00 0.00 3.50
7250 7620 6.206048 CGTCCCAAAATAAGTGTCTTAACCTT 59.794 38.462 0.00 0.00 0.00 3.50
7251 7621 7.388500 CGTCCCAAAATAAGTGTCTTAACCTTA 59.612 37.037 0.00 0.00 0.00 2.69
7252 7622 8.727910 GTCCCAAAATAAGTGTCTTAACCTTAG 58.272 37.037 0.00 0.00 0.00 2.18
7253 7623 8.662255 TCCCAAAATAAGTGTCTTAACCTTAGA 58.338 33.333 0.00 0.00 0.00 2.10
7254 7624 9.292195 CCCAAAATAAGTGTCTTAACCTTAGAA 57.708 33.333 0.00 0.00 0.00 2.10
7259 7629 9.841295 AATAAGTGTCTTAACCTTAGAACAACA 57.159 29.630 0.00 0.00 0.00 3.33
7261 7631 8.747538 AAGTGTCTTAACCTTAGAACAACATT 57.252 30.769 0.00 0.00 0.00 2.71
7262 7632 8.154649 AGTGTCTTAACCTTAGAACAACATTG 57.845 34.615 0.00 0.00 0.00 2.82
7263 7633 7.773690 AGTGTCTTAACCTTAGAACAACATTGT 59.226 33.333 0.00 0.00 44.72 2.71
7264 7634 9.048446 GTGTCTTAACCTTAGAACAACATTGTA 57.952 33.333 0.00 0.00 41.31 2.41
7265 7635 9.048446 TGTCTTAACCTTAGAACAACATTGTAC 57.952 33.333 0.00 0.00 41.31 2.90
7266 7636 9.269453 GTCTTAACCTTAGAACAACATTGTACT 57.731 33.333 0.00 0.00 41.31 2.73
7267 7637 9.485206 TCTTAACCTTAGAACAACATTGTACTC 57.515 33.333 0.00 0.00 41.31 2.59
7268 7638 8.611654 TTAACCTTAGAACAACATTGTACTCC 57.388 34.615 0.00 0.00 41.31 3.85
7269 7639 5.557866 ACCTTAGAACAACATTGTACTCCC 58.442 41.667 0.00 0.00 41.31 4.30
7270 7640 5.309806 ACCTTAGAACAACATTGTACTCCCT 59.690 40.000 0.00 0.00 41.31 4.20
7271 7641 5.875359 CCTTAGAACAACATTGTACTCCCTC 59.125 44.000 0.00 0.00 41.31 4.30
7272 7642 6.295916 CCTTAGAACAACATTGTACTCCCTCT 60.296 42.308 0.00 0.00 41.31 3.69
7273 7643 4.899502 AGAACAACATTGTACTCCCTCTG 58.100 43.478 0.00 0.00 41.31 3.35
7274 7644 4.348168 AGAACAACATTGTACTCCCTCTGT 59.652 41.667 0.00 0.00 41.31 3.41
7275 7645 5.542635 AGAACAACATTGTACTCCCTCTGTA 59.457 40.000 0.00 0.00 41.31 2.74
7276 7646 5.818678 ACAACATTGTACTCCCTCTGTAA 57.181 39.130 0.00 0.00 40.16 2.41
7277 7647 6.182507 ACAACATTGTACTCCCTCTGTAAA 57.817 37.500 0.00 0.00 40.16 2.01
7278 7648 5.995897 ACAACATTGTACTCCCTCTGTAAAC 59.004 40.000 0.00 0.00 40.16 2.01
7279 7649 5.818678 ACATTGTACTCCCTCTGTAAACA 57.181 39.130 0.00 0.00 0.00 2.83
7280 7650 6.182507 ACATTGTACTCCCTCTGTAAACAA 57.817 37.500 0.00 0.00 0.00 2.83
7281 7651 6.597562 ACATTGTACTCCCTCTGTAAACAAA 58.402 36.000 0.00 0.00 0.00 2.83
7282 7652 7.231467 ACATTGTACTCCCTCTGTAAACAAAT 58.769 34.615 0.00 0.00 0.00 2.32
7283 7653 8.380099 ACATTGTACTCCCTCTGTAAACAAATA 58.620 33.333 0.00 0.00 0.00 1.40
7284 7654 9.396022 CATTGTACTCCCTCTGTAAACAAATAT 57.604 33.333 0.00 0.00 0.00 1.28
7290 7660 7.988028 ACTCCCTCTGTAAACAAATATAAGAGC 59.012 37.037 0.00 0.00 0.00 4.09
7291 7661 6.984474 TCCCTCTGTAAACAAATATAAGAGCG 59.016 38.462 0.00 0.00 0.00 5.03
7292 7662 6.761714 CCCTCTGTAAACAAATATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
7293 7663 7.280205 CCCTCTGTAAACAAATATAAGAGCGTT 59.720 37.037 0.00 0.00 0.00 4.84
7294 7664 8.665685 CCTCTGTAAACAAATATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
7339 7709 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
7340 7710 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
7341 7711 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
7342 7712 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
7343 7713 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
7344 7714 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
7345 7715 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
7346 7716 7.471679 GCTCTTATATTTCTTTACGGAGGGAGT 60.472 40.741 0.00 0.00 0.00 3.85
7347 7717 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
7348 7718 8.854117 TCTTATATTTCTTTACGGAGGGAGTAC 58.146 37.037 0.00 0.00 0.00 2.73
7349 7719 8.773033 TTATATTTCTTTACGGAGGGAGTACT 57.227 34.615 0.00 0.00 0.00 2.73
7350 7720 9.866655 TTATATTTCTTTACGGAGGGAGTACTA 57.133 33.333 0.00 0.00 0.00 1.82
7351 7721 8.773033 ATATTTCTTTACGGAGGGAGTACTAA 57.227 34.615 0.00 0.00 0.00 2.24
7352 7722 6.916360 TTTCTTTACGGAGGGAGTACTAAA 57.084 37.500 0.00 0.00 0.00 1.85
7353 7723 6.521151 TTCTTTACGGAGGGAGTACTAAAG 57.479 41.667 0.00 0.00 0.00 1.85
7354 7724 5.574188 TCTTTACGGAGGGAGTACTAAAGT 58.426 41.667 0.00 0.00 0.00 2.66
7355 7725 6.012745 TCTTTACGGAGGGAGTACTAAAGTT 58.987 40.000 0.00 0.00 0.00 2.66
7356 7726 7.175104 TCTTTACGGAGGGAGTACTAAAGTTA 58.825 38.462 0.00 0.00 0.00 2.24
7357 7727 7.337942 TCTTTACGGAGGGAGTACTAAAGTTAG 59.662 40.741 0.00 0.00 36.82 2.34
7358 7728 4.928263 ACGGAGGGAGTACTAAAGTTAGT 58.072 43.478 8.67 8.67 45.39 2.24
7359 7729 6.067217 ACGGAGGGAGTACTAAAGTTAGTA 57.933 41.667 6.81 6.81 43.36 1.82
7373 7743 9.617975 ACTAAAGTTAGTACAACGTTGAGATAC 57.382 33.333 33.66 23.61 41.92 2.24
7374 7744 9.837525 CTAAAGTTAGTACAACGTTGAGATACT 57.162 33.333 33.66 28.25 0.00 2.12
7382 7752 8.932791 AGTACAACGTTGAGATACTTATTTTGG 58.067 33.333 33.66 1.96 0.00 3.28
7383 7753 7.141100 ACAACGTTGAGATACTTATTTTGGG 57.859 36.000 33.66 1.60 0.00 4.12
7384 7754 6.938030 ACAACGTTGAGATACTTATTTTGGGA 59.062 34.615 33.66 0.00 0.00 4.37
7385 7755 6.980051 ACGTTGAGATACTTATTTTGGGAC 57.020 37.500 0.00 0.00 0.00 4.46
7386 7756 5.579511 ACGTTGAGATACTTATTTTGGGACG 59.420 40.000 0.00 0.00 0.00 4.79
7387 7757 5.006358 CGTTGAGATACTTATTTTGGGACGG 59.994 44.000 0.00 0.00 0.00 4.79
7388 7758 5.943349 TGAGATACTTATTTTGGGACGGA 57.057 39.130 0.00 0.00 0.00 4.69
7389 7759 5.914033 TGAGATACTTATTTTGGGACGGAG 58.086 41.667 0.00 0.00 0.00 4.63
7390 7760 5.163343 TGAGATACTTATTTTGGGACGGAGG 60.163 44.000 0.00 0.00 0.00 4.30
7391 7761 2.801077 ACTTATTTTGGGACGGAGGG 57.199 50.000 0.00 0.00 0.00 4.30
7392 7762 2.271777 ACTTATTTTGGGACGGAGGGA 58.728 47.619 0.00 0.00 0.00 4.20
7393 7763 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
7394 7764 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
7395 7765 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
7396 7766 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
7397 7767 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
7410 7780 5.314529 GAGGGAGTAGTTTTTAAGGCAGTT 58.685 41.667 0.00 0.00 0.00 3.16
7411 7781 5.070685 AGGGAGTAGTTTTTAAGGCAGTTG 58.929 41.667 0.00 0.00 0.00 3.16
7426 7796 2.146342 CAGTTGTGCTCCAAGGTACAG 58.854 52.381 0.00 0.00 33.77 2.74
7427 7797 1.072331 AGTTGTGCTCCAAGGTACAGG 59.928 52.381 0.00 0.00 33.77 4.00
7433 7803 1.339151 GCTCCAAGGTACAGGGTCTTG 60.339 57.143 0.00 0.00 38.01 3.02
7452 7822 4.702612 TCTTGAGTCTGAAGTAGGCAGTAG 59.297 45.833 0.00 0.00 34.98 2.57
7453 7823 3.357203 TGAGTCTGAAGTAGGCAGTAGG 58.643 50.000 0.00 0.00 34.98 3.18
7464 7834 1.131638 GGCAGTAGGATCCCATGTGA 58.868 55.000 8.55 0.00 0.00 3.58
7487 7857 9.455847 GTGAAATCAGATAATGACAATTTAGCC 57.544 33.333 0.00 0.00 41.91 3.93
7490 7860 6.844696 TCAGATAATGACAATTTAGCCGTC 57.155 37.500 0.00 0.00 31.12 4.79
7493 7863 6.258727 CAGATAATGACAATTTAGCCGTCAGT 59.741 38.462 0.00 0.00 42.53 3.41
7500 7870 5.001232 ACAATTTAGCCGTCAGTGTTACAT 58.999 37.500 0.00 0.00 0.00 2.29
7516 7886 5.472137 GTGTTACATTTTCCAAGCCTGACTA 59.528 40.000 0.00 0.00 0.00 2.59
7519 7889 3.507622 ACATTTTCCAAGCCTGACTAAGC 59.492 43.478 0.00 0.00 0.00 3.09
7524 7894 2.573462 TCCAAGCCTGACTAAGCAATCT 59.427 45.455 0.00 0.00 0.00 2.40
7541 7911 5.188555 AGCAATCTGAGTCCTGTATCTTTGA 59.811 40.000 0.00 0.00 0.00 2.69
7546 7916 3.056107 TGAGTCCTGTATCTTTGAACCGG 60.056 47.826 0.00 0.00 0.00 5.28
7553 7923 3.625764 TGTATCTTTGAACCGGCTATTGC 59.374 43.478 0.00 0.00 38.76 3.56
7555 7925 2.790433 TCTTTGAACCGGCTATTGCTT 58.210 42.857 0.00 0.00 39.59 3.91
7559 7929 1.003118 TGAACCGGCTATTGCTTCTGT 59.997 47.619 0.00 0.00 39.59 3.41
7563 7933 2.290323 ACCGGCTATTGCTTCTGTTTCT 60.290 45.455 0.00 0.00 39.59 2.52
7570 7940 6.026513 GCTATTGCTTCTGTTTCTGTTGATC 58.973 40.000 0.00 0.00 36.03 2.92
7590 8121 6.507900 TGATCCTAGATTCTAAGCTTGTTCG 58.492 40.000 9.86 0.00 0.00 3.95
7614 8145 7.224753 TCGCTATTAAATTCCTGTGAGTTCATC 59.775 37.037 0.00 0.00 0.00 2.92
7628 8159 4.202357 TGAGTTCATCTGCTAACCACTTGT 60.202 41.667 0.00 0.00 0.00 3.16
7742 8273 0.953960 CAGCCGTGTAAAGGGTCACC 60.954 60.000 0.00 0.00 44.89 4.02
7774 8305 3.197766 TGAGGAAGTACACCTATGGCAAG 59.802 47.826 10.82 0.00 37.93 4.01
7783 8314 1.072173 ACCTATGGCAAGCATATCGCA 59.928 47.619 0.00 0.00 46.13 5.10
7848 8379 7.919091 TGAACTAGCGATACTTTACGATGAATT 59.081 33.333 0.00 0.00 0.00 2.17
7850 8381 9.740239 AACTAGCGATACTTTACGATGAATTAA 57.260 29.630 0.00 0.00 0.00 1.40
7970 8507 4.373116 GAGTGCCTCAACGCCCGA 62.373 66.667 0.00 0.00 0.00 5.14
7981 8518 1.468520 CAACGCCCGACAAATTCATCT 59.531 47.619 0.00 0.00 0.00 2.90
8194 8735 3.057033 CACTGTACTAGTTGGTAGCCGTT 60.057 47.826 0.00 0.00 37.60 4.44
8213 8754 8.215926 AGCCGTTTGCAAAATATGTATAGTAA 57.784 30.769 14.67 0.00 44.83 2.24
8214 8755 8.846211 AGCCGTTTGCAAAATATGTATAGTAAT 58.154 29.630 14.67 0.00 44.83 1.89
8231 8772 9.257651 GTATAGTAATAGTGGTTTGGCTTGTAG 57.742 37.037 0.00 0.00 0.00 2.74
8232 8773 6.123045 AGTAATAGTGGTTTGGCTTGTAGT 57.877 37.500 0.00 0.00 0.00 2.73
8233 8774 7.248743 AGTAATAGTGGTTTGGCTTGTAGTA 57.751 36.000 0.00 0.00 0.00 1.82
8361 8911 1.410153 GGCCTGTGATTTATTGCAGGG 59.590 52.381 10.86 0.00 46.23 4.45
8375 8928 2.442413 TGCAGGGTTACAGTAATTGGC 58.558 47.619 0.00 0.04 0.00 4.52
8378 8931 3.872240 GCAGGGTTACAGTAATTGGCAGA 60.872 47.826 0.00 0.00 0.00 4.26
8381 8934 5.418840 CAGGGTTACAGTAATTGGCAGAAAT 59.581 40.000 0.00 0.00 0.00 2.17
8382 8935 5.418840 AGGGTTACAGTAATTGGCAGAAATG 59.581 40.000 0.00 0.00 0.00 2.32
8400 8953 6.702723 CAGAAATGAGAACCTTCATGCAAAAA 59.297 34.615 0.00 0.00 37.83 1.94
8401 8954 7.386848 CAGAAATGAGAACCTTCATGCAAAAAT 59.613 33.333 0.00 0.00 37.83 1.82
8402 8955 8.587608 AGAAATGAGAACCTTCATGCAAAAATA 58.412 29.630 0.00 0.00 37.83 1.40
8403 8956 8.538409 AAATGAGAACCTTCATGCAAAAATAC 57.462 30.769 0.00 0.00 37.83 1.89
8431 8984 3.574284 TTCACGCTGAAATTGGATTGG 57.426 42.857 0.00 0.00 32.71 3.16
8599 9159 1.445095 GCCTCACCATGCTCTCGAT 59.555 57.895 0.00 0.00 0.00 3.59
8659 9219 1.355066 GCCTTCTCGTTCGCCTTCAG 61.355 60.000 0.00 0.00 0.00 3.02
8660 9220 0.243907 CCTTCTCGTTCGCCTTCAGA 59.756 55.000 0.00 0.00 0.00 3.27
8716 9276 4.496336 GGCCTTGATCTGCGCCCT 62.496 66.667 4.18 0.00 35.23 5.19
8779 9339 3.073735 CCTCTCCTCCAGCACGCT 61.074 66.667 0.00 0.00 0.00 5.07
8781 9341 2.283173 TCTCCTCCAGCACGCTGA 60.283 61.111 20.42 5.89 46.30 4.26
9083 9643 2.811317 GCCTCCAGCACGTTCGAG 60.811 66.667 0.00 0.00 42.97 4.04
9085 9645 2.651361 CTCCAGCACGTTCGAGGT 59.349 61.111 0.00 0.00 0.00 3.85
9245 9808 2.838386 TCAGATAGTTCACGGCGTAC 57.162 50.000 14.22 8.83 0.00 3.67
9314 9877 1.977188 CGATGTAGTGCGTCTCAACA 58.023 50.000 0.00 0.00 0.00 3.33
9347 9910 4.992511 TAAAACACGCCGGCCGCT 62.993 61.111 22.85 0.00 41.76 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.244387 GCTCTTCAGTCTTCTTCTTGGGT 60.244 47.826 0.00 0.00 0.00 4.51
53 54 3.284711 CCTCTTGGAGGTACGGTCT 57.715 57.895 5.49 0.00 44.25 3.85
98 99 2.749621 GACAACCCAAGAGCCAACTATG 59.250 50.000 0.00 0.00 0.00 2.23
152 174 3.310501 AGTTCCACGTAGTTTCAAAACCG 59.689 43.478 2.08 3.01 41.61 4.44
157 179 5.603596 ACACATAGTTCCACGTAGTTTCAA 58.396 37.500 0.00 0.00 41.61 2.69
183 228 6.318648 GGCAAACACATAGATCCACAAATAGA 59.681 38.462 0.00 0.00 0.00 1.98
208 253 6.381801 GGAGTTCCACATAGTTTCACAAATG 58.618 40.000 0.00 0.00 35.64 2.32
260 305 7.649306 ACAAAACTTGAAGTGCATAGAACATTC 59.351 33.333 0.00 0.00 0.00 2.67
369 452 7.987649 TCATTTGCTTGCTTCTTTTCAAATTT 58.012 26.923 0.00 0.00 33.47 1.82
398 481 4.306600 GGTCCTGTGCTTTATTGGTTTTG 58.693 43.478 0.00 0.00 0.00 2.44
404 488 3.279434 GGTAGGGTCCTGTGCTTTATTG 58.721 50.000 0.00 0.00 0.00 1.90
427 511 1.754621 CTACCGCCAGGCTCTCTGA 60.755 63.158 10.54 0.00 46.18 3.27
431 515 4.400251 ACCCTACCGCCAGGCTCT 62.400 66.667 10.54 0.00 42.76 4.09
434 518 3.851128 GAGACCCTACCGCCAGGC 61.851 72.222 0.00 0.00 42.76 4.85
521 611 1.404477 GGGATTTTGTCGTGCAAACG 58.596 50.000 7.25 0.00 45.70 3.60
567 658 3.887716 GGTAAGCTGTCTAATCCTACCGA 59.112 47.826 0.00 0.00 0.00 4.69
622 716 2.629656 GCCGTTTGCCTGTGCTGAT 61.630 57.895 0.00 0.00 38.71 2.90
649 743 2.753043 GTAGGGTGCGACGGAGGA 60.753 66.667 0.00 0.00 0.00 3.71
741 837 9.190317 GGATCTGACCCAGTTTAGAAATAATTT 57.810 33.333 0.00 0.00 32.61 1.82
746 845 5.488919 TCAGGATCTGACCCAGTTTAGAAAT 59.511 40.000 0.00 0.00 35.39 2.17
750 849 4.826274 TTCAGGATCTGACCCAGTTTAG 57.174 45.455 0.00 0.00 40.46 1.85
751 850 5.779241 AATTCAGGATCTGACCCAGTTTA 57.221 39.130 0.00 0.00 40.46 2.01
836 936 4.052229 AGGTGCGCGCTTAGACGT 62.052 61.111 33.29 20.02 34.88 4.34
870 970 4.567597 ACAGGGGTCACCGGGTCA 62.568 66.667 6.32 0.00 46.96 4.02
871 971 4.016706 CACAGGGGTCACCGGGTC 62.017 72.222 6.32 0.00 46.96 4.46
953 1054 4.408821 GGGAGGTGATGTGCGGCA 62.409 66.667 0.00 0.00 0.00 5.69
1076 1177 1.758906 CCTCTCTCGGTCTTCCCCC 60.759 68.421 0.00 0.00 0.00 5.40
1326 1428 1.280710 AGAGCGGAGAGTGAGAGAGAA 59.719 52.381 0.00 0.00 0.00 2.87
1332 1434 1.134401 AGAGAGAGAGCGGAGAGTGAG 60.134 57.143 0.00 0.00 0.00 3.51
1335 1437 1.139058 GAGAGAGAGAGAGCGGAGAGT 59.861 57.143 0.00 0.00 0.00 3.24
1336 1438 1.414181 AGAGAGAGAGAGAGCGGAGAG 59.586 57.143 0.00 0.00 0.00 3.20
1340 1442 1.414181 AGAGAGAGAGAGAGAGAGCGG 59.586 57.143 0.00 0.00 0.00 5.52
1341 1443 2.363680 AGAGAGAGAGAGAGAGAGAGCG 59.636 54.545 0.00 0.00 0.00 5.03
1342 1444 3.244044 GGAGAGAGAGAGAGAGAGAGAGC 60.244 56.522 0.00 0.00 0.00 4.09
1343 1445 3.323403 GGGAGAGAGAGAGAGAGAGAGAG 59.677 56.522 0.00 0.00 0.00 3.20
1356 1458 5.194432 GCCTGATTATATACGGGAGAGAGA 58.806 45.833 8.23 0.00 34.76 3.10
1403 1527 0.245539 CGGTGAGCCCTTTTAGACGA 59.754 55.000 0.00 0.00 0.00 4.20
1404 1528 0.739813 CCGGTGAGCCCTTTTAGACG 60.740 60.000 0.00 0.00 0.00 4.18
1405 1529 0.611714 TCCGGTGAGCCCTTTTAGAC 59.388 55.000 0.00 0.00 0.00 2.59
1406 1530 1.002773 GTTCCGGTGAGCCCTTTTAGA 59.997 52.381 0.00 0.00 0.00 2.10
1407 1531 1.271163 TGTTCCGGTGAGCCCTTTTAG 60.271 52.381 0.00 0.00 0.00 1.85
1408 1532 0.766131 TGTTCCGGTGAGCCCTTTTA 59.234 50.000 0.00 0.00 0.00 1.52
1409 1533 0.106419 TTGTTCCGGTGAGCCCTTTT 60.106 50.000 0.00 0.00 0.00 2.27
1413 1537 2.421220 TTTTTGTTCCGGTGAGCCC 58.579 52.632 0.00 0.00 0.00 5.19
1428 1552 5.061179 TCGAGAAAACTCCCGATTCTTTTT 58.939 37.500 0.00 0.00 33.73 1.94
1432 1556 4.473477 AATCGAGAAAACTCCCGATTCT 57.527 40.909 0.00 0.00 45.10 2.40
1436 1560 3.735591 ACAAAATCGAGAAAACTCCCGA 58.264 40.909 0.00 0.00 35.43 5.14
1441 1565 6.632834 CGAATCACAACAAAATCGAGAAAACT 59.367 34.615 0.00 0.00 32.38 2.66
1442 1566 6.129457 CCGAATCACAACAAAATCGAGAAAAC 60.129 38.462 0.00 0.00 32.38 2.43
1446 1570 4.311606 TCCGAATCACAACAAAATCGAGA 58.688 39.130 0.00 0.00 32.38 4.04
1471 1595 0.527817 CGACGCCCTCAATCCTGTAC 60.528 60.000 0.00 0.00 0.00 2.90
1493 1617 4.017499 ACCTGGACATAAAGTTAGGCCATT 60.017 41.667 5.01 0.00 38.01 3.16
1516 1640 8.970020 AGGCATAAATCTATCAAACATGAAACA 58.030 29.630 0.00 0.00 0.00 2.83
1517 1641 9.241317 CAGGCATAAATCTATCAAACATGAAAC 57.759 33.333 0.00 0.00 0.00 2.78
1518 1642 9.187996 TCAGGCATAAATCTATCAAACATGAAA 57.812 29.630 0.00 0.00 0.00 2.69
1519 1643 8.750515 TCAGGCATAAATCTATCAAACATGAA 57.249 30.769 0.00 0.00 0.00 2.57
1520 1644 8.929260 ATCAGGCATAAATCTATCAAACATGA 57.071 30.769 0.00 0.00 0.00 3.07
1521 1645 9.976511 AAATCAGGCATAAATCTATCAAACATG 57.023 29.630 0.00 0.00 0.00 3.21
1523 1647 8.344831 CGAAATCAGGCATAAATCTATCAAACA 58.655 33.333 0.00 0.00 0.00 2.83
1531 1655 2.549754 CCGCGAAATCAGGCATAAATCT 59.450 45.455 8.23 0.00 0.00 2.40
1624 1748 3.513909 TGGATTATATGCTTGCAGCCT 57.486 42.857 0.87 0.00 41.51 4.58
1637 1761 0.819259 AGCCACGCGCAATGGATTAT 60.819 50.000 27.40 9.79 39.87 1.28
1649 1773 4.090057 GCCAACGAGAAGCCACGC 62.090 66.667 0.00 0.00 0.00 5.34
1650 1774 2.175184 CTTGCCAACGAGAAGCCACG 62.175 60.000 0.00 0.00 0.00 4.94
1651 1775 1.166531 ACTTGCCAACGAGAAGCCAC 61.167 55.000 0.00 0.00 0.00 5.01
1652 1776 0.884704 GACTTGCCAACGAGAAGCCA 60.885 55.000 0.00 0.00 0.00 4.75
1665 1789 4.671377 TGCGATAAATGGAAATGACTTGC 58.329 39.130 0.00 0.00 0.00 4.01
1683 1807 6.238049 GCAAAATGTGGCATTATAAATTGCGA 60.238 34.615 10.42 0.00 39.78 5.10
1714 1838 1.351017 ACCAAGCCTCGGAATCTTTCA 59.649 47.619 0.00 0.00 0.00 2.69
1717 1841 1.906574 TGTACCAAGCCTCGGAATCTT 59.093 47.619 0.00 0.00 0.00 2.40
1743 1874 2.002586 CAGCATACAAGAAGACCACCG 58.997 52.381 0.00 0.00 0.00 4.94
1747 1878 7.593825 ACAAAATAACAGCATACAAGAAGACC 58.406 34.615 0.00 0.00 0.00 3.85
1769 1903 9.513906 TTCATGTTAGGAAACTATGAATGACAA 57.486 29.630 0.00 0.00 43.94 3.18
1790 1924 5.978919 TGCTTTCTAAAGTTGCAGTTTCATG 59.021 36.000 4.50 0.00 38.28 3.07
1829 1963 1.810151 TCAACGGGCAACAAGATAAGC 59.190 47.619 0.00 0.00 39.74 3.09
1835 1969 1.769733 CACATTCAACGGGCAACAAG 58.230 50.000 0.00 0.00 39.74 3.16
1836 1970 0.249238 GCACATTCAACGGGCAACAA 60.249 50.000 0.00 0.00 39.74 2.83
1844 1978 1.616620 CCGATTTGGCACATTCAACG 58.383 50.000 0.00 0.00 39.30 4.10
1896 2030 9.383519 CCTAGCTGTTCAAGATCAACTTTTATA 57.616 33.333 0.00 0.00 36.61 0.98
1897 2031 7.148171 GCCTAGCTGTTCAAGATCAACTTTTAT 60.148 37.037 0.00 0.00 36.61 1.40
1898 2032 6.149474 GCCTAGCTGTTCAAGATCAACTTTTA 59.851 38.462 0.00 0.00 36.61 1.52
1899 2033 5.048434 GCCTAGCTGTTCAAGATCAACTTTT 60.048 40.000 0.00 0.00 36.61 2.27
1900 2034 4.457257 GCCTAGCTGTTCAAGATCAACTTT 59.543 41.667 0.00 0.00 36.61 2.66
1901 2035 4.006319 GCCTAGCTGTTCAAGATCAACTT 58.994 43.478 0.00 0.00 39.70 2.66
1902 2036 3.262915 AGCCTAGCTGTTCAAGATCAACT 59.737 43.478 0.00 0.00 37.57 3.16
1903 2037 3.604582 AGCCTAGCTGTTCAAGATCAAC 58.395 45.455 0.00 0.00 37.57 3.18
1904 2038 3.988976 AGCCTAGCTGTTCAAGATCAA 57.011 42.857 0.00 0.00 37.57 2.57
1905 2039 3.386078 CCTAGCCTAGCTGTTCAAGATCA 59.614 47.826 0.00 0.00 40.10 2.92
1906 2040 3.639094 TCCTAGCCTAGCTGTTCAAGATC 59.361 47.826 0.00 0.00 40.10 2.75
1907 2041 3.647636 TCCTAGCCTAGCTGTTCAAGAT 58.352 45.455 0.00 0.00 40.10 2.40
1908 2042 3.101643 TCCTAGCCTAGCTGTTCAAGA 57.898 47.619 0.00 0.00 40.10 3.02
1909 2043 3.895232 TTCCTAGCCTAGCTGTTCAAG 57.105 47.619 0.00 0.00 40.10 3.02
1910 2044 4.634012 TTTTCCTAGCCTAGCTGTTCAA 57.366 40.909 0.00 0.00 40.10 2.69
1911 2045 4.225042 TCATTTTCCTAGCCTAGCTGTTCA 59.775 41.667 0.00 0.00 40.10 3.18
1912 2046 4.770795 TCATTTTCCTAGCCTAGCTGTTC 58.229 43.478 0.00 0.00 40.10 3.18
1913 2047 4.844349 TCATTTTCCTAGCCTAGCTGTT 57.156 40.909 0.00 0.00 40.10 3.16
1914 2048 5.841237 TCTATCATTTTCCTAGCCTAGCTGT 59.159 40.000 0.00 0.00 40.10 4.40
1915 2049 6.352016 TCTATCATTTTCCTAGCCTAGCTG 57.648 41.667 0.00 0.00 40.10 4.24
1916 2050 7.566658 ATTCTATCATTTTCCTAGCCTAGCT 57.433 36.000 0.00 0.00 43.41 3.32
1917 2051 7.984617 CCTATTCTATCATTTTCCTAGCCTAGC 59.015 40.741 0.00 0.00 0.00 3.42
1918 2052 9.261035 TCCTATTCTATCATTTTCCTAGCCTAG 57.739 37.037 0.00 0.00 0.00 3.02
1919 2053 9.615660 TTCCTATTCTATCATTTTCCTAGCCTA 57.384 33.333 0.00 0.00 0.00 3.93
1920 2054 8.379331 GTTCCTATTCTATCATTTTCCTAGCCT 58.621 37.037 0.00 0.00 0.00 4.58
1921 2055 7.332182 CGTTCCTATTCTATCATTTTCCTAGCC 59.668 40.741 0.00 0.00 0.00 3.93
1922 2056 7.148557 GCGTTCCTATTCTATCATTTTCCTAGC 60.149 40.741 0.00 0.00 0.00 3.42
1923 2057 7.872993 TGCGTTCCTATTCTATCATTTTCCTAG 59.127 37.037 0.00 0.00 0.00 3.02
1924 2058 7.732025 TGCGTTCCTATTCTATCATTTTCCTA 58.268 34.615 0.00 0.00 0.00 2.94
1925 2059 6.591935 TGCGTTCCTATTCTATCATTTTCCT 58.408 36.000 0.00 0.00 0.00 3.36
1926 2060 6.861065 TGCGTTCCTATTCTATCATTTTCC 57.139 37.500 0.00 0.00 0.00 3.13
1927 2061 7.920738 AGTTGCGTTCCTATTCTATCATTTTC 58.079 34.615 0.00 0.00 0.00 2.29
1928 2062 7.865706 AGTTGCGTTCCTATTCTATCATTTT 57.134 32.000 0.00 0.00 0.00 1.82
1929 2063 7.679638 GCAAGTTGCGTTCCTATTCTATCATTT 60.680 37.037 12.95 0.00 31.71 2.32
1930 2064 6.238484 GCAAGTTGCGTTCCTATTCTATCATT 60.238 38.462 12.95 0.00 31.71 2.57
1931 2065 5.237344 GCAAGTTGCGTTCCTATTCTATCAT 59.763 40.000 12.95 0.00 31.71 2.45
1932 2066 4.570772 GCAAGTTGCGTTCCTATTCTATCA 59.429 41.667 12.95 0.00 31.71 2.15
1933 2067 5.084385 GCAAGTTGCGTTCCTATTCTATC 57.916 43.478 12.95 0.00 31.71 2.08
1947 2081 6.611381 TCAATTGACTGTATTAGCAAGTTGC 58.389 36.000 20.44 20.44 45.46 4.17
2150 2284 0.853530 AGCCCCCATAAATCCCACTC 59.146 55.000 0.00 0.00 0.00 3.51
2274 2408 2.565834 TGTCCAAGTTACCTAGACTGGC 59.434 50.000 0.00 0.00 0.00 4.85
2280 2414 5.639506 CAGTCACATTGTCCAAGTTACCTAG 59.360 44.000 0.00 0.00 0.00 3.02
2471 2605 2.620585 GGAGCCTTTATTGCTGTCATCC 59.379 50.000 0.00 0.00 39.69 3.51
2501 2635 4.757657 TGAGTTGATAGAGTAGATCGAGGC 59.242 45.833 0.00 0.00 0.00 4.70
2696 2830 4.583871 AGTTCATTCAAGCAGGTAAGAGG 58.416 43.478 0.00 0.00 0.00 3.69
2701 2835 6.852420 ACTACTAGTTCATTCAAGCAGGTA 57.148 37.500 0.00 0.00 0.00 3.08
2702 2836 5.746990 ACTACTAGTTCATTCAAGCAGGT 57.253 39.130 0.00 0.00 0.00 4.00
2703 2837 7.548097 TCTTACTACTAGTTCATTCAAGCAGG 58.452 38.462 0.00 0.00 0.00 4.85
2705 2839 8.585881 AGTTCTTACTACTAGTTCATTCAAGCA 58.414 33.333 0.00 0.00 31.21 3.91
2706 2840 8.865001 CAGTTCTTACTACTAGTTCATTCAAGC 58.135 37.037 0.00 0.00 31.96 4.01
2708 2842 9.692749 CACAGTTCTTACTACTAGTTCATTCAA 57.307 33.333 0.00 0.00 31.96 2.69
2710 2844 9.694137 AACACAGTTCTTACTACTAGTTCATTC 57.306 33.333 0.00 0.00 31.96 2.67
2711 2845 9.477484 CAACACAGTTCTTACTACTAGTTCATT 57.523 33.333 0.00 0.00 31.96 2.57
2712 2846 8.088981 CCAACACAGTTCTTACTACTAGTTCAT 58.911 37.037 0.00 0.00 31.96 2.57
2723 2857 6.619801 ACTTTGATCCAACACAGTTCTTAC 57.380 37.500 0.00 0.00 28.18 2.34
2727 2861 9.559958 CATTAATACTTTGATCCAACACAGTTC 57.440 33.333 0.00 0.00 33.68 3.01
2793 2927 5.072741 AGGAAGCTCATTTGCAACTTCTTA 58.927 37.500 19.98 0.00 37.49 2.10
2813 2947 5.997746 GCTGGTATTGATATAAGCACAAGGA 59.002 40.000 0.00 0.00 0.00 3.36
2833 2967 2.517959 TGGAGTTGAAAGATTGGCTGG 58.482 47.619 0.00 0.00 0.00 4.85
2861 2995 6.061441 TCTAACAAAGGAGTGCTGATTTTCA 58.939 36.000 0.00 0.00 0.00 2.69
2907 3041 6.968904 AGCGCAATCAATGATTACTTTAACTG 59.031 34.615 11.47 0.00 30.44 3.16
2918 3052 8.783833 ATTACTAGATTAGCGCAATCAATGAT 57.216 30.769 24.50 13.72 44.81 2.45
2925 3059 6.146837 CAGCAAGATTACTAGATTAGCGCAAT 59.853 38.462 11.47 7.53 0.00 3.56
3115 3446 3.029320 TGTCAACCTTCATTTGCATGC 57.971 42.857 11.82 11.82 0.00 4.06
3150 3481 6.740110 TGTAACATGCTTGGACGTAAAATTT 58.260 32.000 4.44 0.00 0.00 1.82
3158 3489 2.805671 TCAACTGTAACATGCTTGGACG 59.194 45.455 4.44 2.18 0.00 4.79
3267 3598 4.442893 GCTACACCATCACCAATACTGCTA 60.443 45.833 0.00 0.00 0.00 3.49
3285 3616 8.023021 AGTCAATATTAGAATGGACAGCTACA 57.977 34.615 0.00 0.00 0.00 2.74
3317 3648 4.038883 TGACAACATCATGTGGCAAATTCA 59.961 37.500 0.00 0.00 32.57 2.57
3478 3809 1.068679 GCTCTGCTTTTCTTGCTGTCC 60.069 52.381 0.00 0.00 0.00 4.02
3479 3810 1.605710 TGCTCTGCTTTTCTTGCTGTC 59.394 47.619 0.00 0.00 0.00 3.51
3742 4073 7.418025 GGGTAGTTTTAGCTGAGTATGAGACAT 60.418 40.741 0.00 0.00 0.00 3.06
3898 4229 0.331278 CCACCCAAAGCATACCCAGA 59.669 55.000 0.00 0.00 0.00 3.86
3922 4253 1.982958 AGTCATAACGGGTGGGAAACT 59.017 47.619 0.00 0.00 0.00 2.66
3945 4276 3.198635 CAGCAGAACTCTGGGGAGAATAA 59.801 47.826 8.74 0.00 43.94 1.40
4046 4377 2.549349 GGCTGAACAAACTCGGTTCCTA 60.549 50.000 0.00 0.00 43.05 2.94
4110 4441 1.530323 AAAAGTTCGGGTCGGGAATG 58.470 50.000 0.00 0.00 0.00 2.67
4245 4576 7.227156 ACGGATATTGAGCTTGAGGAAATAAT 58.773 34.615 0.00 0.00 0.00 1.28
4269 4600 3.608316 AGTTGAAGCCTCTGATCAGAC 57.392 47.619 21.67 12.88 33.22 3.51
4310 4641 4.351127 TCCTCTTAGGGTTGTAGGAGAAC 58.649 47.826 0.00 0.00 35.59 3.01
4360 4691 1.819632 GCGCTCCAACATAGGGTGG 60.820 63.158 4.70 4.70 0.00 4.61
4439 4770 4.191544 CCTCGCAGAATCATTTCTACCAA 58.808 43.478 0.00 0.00 40.28 3.67
4612 4943 7.549134 CACAACTAACCTGAAATCTACTATGCA 59.451 37.037 0.00 0.00 0.00 3.96
4695 5026 2.227194 TGCTGAGATGCATGCCTAATG 58.773 47.619 16.68 2.31 38.12 1.90
4771 5102 2.674852 CAAGAGCACATCACGCATTAGT 59.325 45.455 0.00 0.00 0.00 2.24
4920 5251 5.588845 ACCTTTTGGATCACATAATTCCCA 58.411 37.500 0.00 0.00 44.07 4.37
4950 5281 4.150897 TGCTCCACATAACAGATAACCC 57.849 45.455 0.00 0.00 0.00 4.11
4983 5314 3.436704 AGTTATCATGTGCGACAAAGTGG 59.563 43.478 0.00 0.00 0.00 4.00
5158 5489 3.996150 ACAGGCAAATGTTGAAGAGTG 57.004 42.857 0.00 0.00 0.00 3.51
5165 5496 5.355596 TGGACTAAAAACAGGCAAATGTTG 58.644 37.500 2.43 0.00 42.49 3.33
5213 5544 9.100197 TGCATACTCATAGACCCATATCTTTAA 57.900 33.333 0.00 0.00 0.00 1.52
5268 5599 6.865834 AAAAATGCTATAAACACATGGGGA 57.134 33.333 0.00 0.00 0.00 4.81
5325 5656 8.457261 AGCTAATTCTTGAGATAAACAGCTTTG 58.543 33.333 0.00 0.00 31.94 2.77
5373 5704 3.966665 TCATGCATACCAGAGTACCATCA 59.033 43.478 0.00 0.00 0.00 3.07
5382 5713 3.346315 CCACTTGTTCATGCATACCAGA 58.654 45.455 0.00 0.00 0.00 3.86
5385 5716 1.818060 TGCCACTTGTTCATGCATACC 59.182 47.619 0.00 0.00 0.00 2.73
5490 5822 6.382919 TTGGGCTAATCAGGTTAGTTAGTT 57.617 37.500 2.30 0.00 41.55 2.24
5491 5823 6.382919 TTTGGGCTAATCAGGTTAGTTAGT 57.617 37.500 2.30 0.00 41.55 2.24
5492 5824 7.881775 AATTTGGGCTAATCAGGTTAGTTAG 57.118 36.000 2.30 0.00 41.55 2.34
5493 5825 8.554011 AGTAATTTGGGCTAATCAGGTTAGTTA 58.446 33.333 2.30 0.00 41.55 2.24
5534 5866 5.814705 CAGTTATCCAAGCAAACAAACCAAA 59.185 36.000 0.00 0.00 0.00 3.28
5535 5867 5.105146 ACAGTTATCCAAGCAAACAAACCAA 60.105 36.000 0.00 0.00 0.00 3.67
5536 5868 4.404073 ACAGTTATCCAAGCAAACAAACCA 59.596 37.500 0.00 0.00 0.00 3.67
5627 5959 2.365293 GGCCCATAAACAACCCATGATC 59.635 50.000 0.00 0.00 0.00 2.92
5719 6051 6.890293 AGTCCTGACAAATCCTTATCCTAAC 58.110 40.000 0.00 0.00 0.00 2.34
5740 6073 4.875561 ACTCAAACTCTCAACCCTAGTC 57.124 45.455 0.00 0.00 0.00 2.59
5781 6114 4.543590 AATCTCACAGGGTACACTCTTG 57.456 45.455 0.00 0.00 0.00 3.02
5809 6142 5.199024 ACATGTCAGATGATCTAGTGAGC 57.801 43.478 0.00 0.00 0.00 4.26
5838 6171 3.275143 TGACTGGCCACCATATTTAACG 58.725 45.455 0.00 0.00 30.82 3.18
5870 6203 6.436847 TCTTTGCACATTATCCCTGAAATCAA 59.563 34.615 0.00 0.00 0.00 2.57
5931 6265 4.010349 GCTTTCTACAAGCTGGTGGTAAT 58.990 43.478 3.21 0.00 40.01 1.89
5955 6289 6.061441 TCCTGATTACTCTAGCTCTCTTCAG 58.939 44.000 0.00 0.00 0.00 3.02
6187 6524 5.779260 AGCAGGACACATCAGATACTATGAT 59.221 40.000 0.00 0.00 37.90 2.45
6188 6525 5.010415 CAGCAGGACACATCAGATACTATGA 59.990 44.000 0.00 0.00 0.00 2.15
6357 6694 4.810790 ACACACTCTATGCACTTCTGTAC 58.189 43.478 0.00 0.00 0.00 2.90
6480 6817 8.893219 TTCATATCGAGCATTATTCTGAAGTT 57.107 30.769 0.00 0.00 0.00 2.66
6497 6834 7.360691 CCAGGATCAAGTAGCAAATTCATATCG 60.361 40.741 0.00 0.00 0.00 2.92
6502 6839 3.696051 GCCAGGATCAAGTAGCAAATTCA 59.304 43.478 0.00 0.00 0.00 2.57
6523 6860 1.268079 GGAGAAAGAAAGCCAGTGTGC 59.732 52.381 0.00 0.00 0.00 4.57
6531 6868 5.973899 AAGATTGAAGGGAGAAAGAAAGC 57.026 39.130 0.00 0.00 0.00 3.51
6743 7080 6.308766 CAGTTTATAAATCAAAGCACTGTGGC 59.691 38.462 10.21 2.10 0.00 5.01
6744 7081 7.538678 GTCAGTTTATAAATCAAAGCACTGTGG 59.461 37.037 10.21 0.00 0.00 4.17
6745 7082 8.075574 TGTCAGTTTATAAATCAAAGCACTGTG 58.924 33.333 2.76 2.76 0.00 3.66
6746 7083 8.165239 TGTCAGTTTATAAATCAAAGCACTGT 57.835 30.769 0.31 0.00 0.00 3.55
6747 7084 8.292448 ACTGTCAGTTTATAAATCAAAGCACTG 58.708 33.333 0.00 2.60 0.00 3.66
6748 7085 8.292448 CACTGTCAGTTTATAAATCAAAGCACT 58.708 33.333 1.67 0.00 0.00 4.40
6749 7086 7.538678 CCACTGTCAGTTTATAAATCAAAGCAC 59.461 37.037 1.67 0.00 0.00 4.40
6750 7087 7.592938 CCACTGTCAGTTTATAAATCAAAGCA 58.407 34.615 1.67 0.00 0.00 3.91
6751 7088 6.528072 GCCACTGTCAGTTTATAAATCAAAGC 59.472 38.462 1.67 0.51 0.00 3.51
6752 7089 7.752239 CAGCCACTGTCAGTTTATAAATCAAAG 59.248 37.037 1.67 0.00 0.00 2.77
6753 7090 7.230510 ACAGCCACTGTCAGTTTATAAATCAAA 59.769 33.333 1.67 0.00 41.21 2.69
6810 7150 2.801342 GCGACAAATGAACCAAAGGCAA 60.801 45.455 0.00 0.00 0.00 4.52
6871 7241 2.026822 CCAAGGGCTACTTCACTCACAT 60.027 50.000 0.00 0.00 37.29 3.21
6872 7242 1.347707 CCAAGGGCTACTTCACTCACA 59.652 52.381 0.00 0.00 37.29 3.58
6873 7243 1.946283 GCCAAGGGCTACTTCACTCAC 60.946 57.143 0.00 0.00 46.69 3.51
6874 7244 0.324943 GCCAAGGGCTACTTCACTCA 59.675 55.000 0.00 0.00 46.69 3.41
6875 7245 3.160872 GCCAAGGGCTACTTCACTC 57.839 57.895 0.00 0.00 46.69 3.51
6931 7301 2.345760 ATGCTGCAAAAGAGCCCGG 61.346 57.895 6.36 0.00 35.43 5.73
6933 7303 0.319405 AACATGCTGCAAAAGAGCCC 59.681 50.000 6.36 0.00 35.43 5.19
6935 7305 1.790623 CACAACATGCTGCAAAAGAGC 59.209 47.619 6.36 0.00 36.95 4.09
6997 7367 1.607467 GACAACCTGCCCAGCCAAT 60.607 57.895 0.00 0.00 0.00 3.16
7063 7433 1.492599 TCCGCAATATCCCCATGTTGA 59.507 47.619 0.00 0.00 33.91 3.18
7072 7442 3.305398 AGATCTCGTTCCGCAATATCC 57.695 47.619 0.00 0.00 0.00 2.59
7096 7466 3.384146 TCTGCTCCACAATCTCTCTGATC 59.616 47.826 0.00 0.00 33.57 2.92
7157 7527 1.144969 AACATGGCGTTACAGTGTCG 58.855 50.000 0.00 0.00 35.52 4.35
7212 7582 0.257039 TGGGACGGAGGGAGTACTAC 59.743 60.000 0.00 0.00 0.00 2.73
7215 7585 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
7216 7586 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
7217 7587 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
7218 7588 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
7219 7589 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
7220 7590 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
7221 7591 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
7222 7592 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
7223 7593 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
7224 7594 5.106436 GGTTAAGACACTTATTTTGGGACGG 60.106 44.000 0.00 0.00 0.00 4.79
7225 7595 5.704053 AGGTTAAGACACTTATTTTGGGACG 59.296 40.000 0.00 0.00 0.00 4.79
7226 7596 7.520451 AAGGTTAAGACACTTATTTTGGGAC 57.480 36.000 0.00 0.00 0.00 4.46
7227 7597 8.662255 TCTAAGGTTAAGACACTTATTTTGGGA 58.338 33.333 0.00 0.00 0.00 4.37
7228 7598 8.857694 TCTAAGGTTAAGACACTTATTTTGGG 57.142 34.615 0.00 0.00 0.00 4.12
7233 7603 9.841295 TGTTGTTCTAAGGTTAAGACACTTATT 57.159 29.630 0.00 0.00 0.00 1.40
7235 7605 9.841295 AATGTTGTTCTAAGGTTAAGACACTTA 57.159 29.630 0.00 0.00 0.00 2.24
7236 7606 8.621286 CAATGTTGTTCTAAGGTTAAGACACTT 58.379 33.333 0.00 0.00 0.00 3.16
7237 7607 7.773690 ACAATGTTGTTCTAAGGTTAAGACACT 59.226 33.333 0.00 0.00 38.47 3.55
7238 7608 7.927048 ACAATGTTGTTCTAAGGTTAAGACAC 58.073 34.615 0.00 0.00 38.47 3.67
7239 7609 9.048446 GTACAATGTTGTTCTAAGGTTAAGACA 57.952 33.333 3.45 0.00 42.35 3.41
7240 7610 9.269453 AGTACAATGTTGTTCTAAGGTTAAGAC 57.731 33.333 3.45 0.00 42.35 3.01
7241 7611 9.485206 GAGTACAATGTTGTTCTAAGGTTAAGA 57.515 33.333 3.45 0.00 42.35 2.10
7242 7612 8.718734 GGAGTACAATGTTGTTCTAAGGTTAAG 58.281 37.037 3.45 0.00 42.35 1.85
7243 7613 7.662669 GGGAGTACAATGTTGTTCTAAGGTTAA 59.337 37.037 3.45 0.00 42.35 2.01
7244 7614 7.016858 AGGGAGTACAATGTTGTTCTAAGGTTA 59.983 37.037 3.45 0.00 42.35 2.85
7245 7615 6.002082 GGGAGTACAATGTTGTTCTAAGGTT 58.998 40.000 3.45 0.00 42.35 3.50
7246 7616 5.309806 AGGGAGTACAATGTTGTTCTAAGGT 59.690 40.000 3.45 0.00 42.35 3.50
7247 7617 5.805728 AGGGAGTACAATGTTGTTCTAAGG 58.194 41.667 3.45 0.00 42.35 2.69
7248 7618 6.591834 CAGAGGGAGTACAATGTTGTTCTAAG 59.408 42.308 3.45 0.00 42.35 2.18
7249 7619 6.042781 ACAGAGGGAGTACAATGTTGTTCTAA 59.957 38.462 3.45 0.00 42.35 2.10
7250 7620 5.542635 ACAGAGGGAGTACAATGTTGTTCTA 59.457 40.000 3.45 0.00 42.35 2.10
7251 7621 4.348168 ACAGAGGGAGTACAATGTTGTTCT 59.652 41.667 3.45 4.27 42.35 3.01
7252 7622 4.642429 ACAGAGGGAGTACAATGTTGTTC 58.358 43.478 3.45 0.00 42.35 3.18
7253 7623 4.706842 ACAGAGGGAGTACAATGTTGTT 57.293 40.909 3.45 0.00 42.35 2.83
7254 7624 5.818678 TTACAGAGGGAGTACAATGTTGT 57.181 39.130 3.64 3.64 44.86 3.32
7255 7625 5.995282 TGTTTACAGAGGGAGTACAATGTTG 59.005 40.000 0.00 0.00 0.00 3.33
7256 7626 6.182507 TGTTTACAGAGGGAGTACAATGTT 57.817 37.500 0.00 0.00 0.00 2.71
7257 7627 5.818678 TGTTTACAGAGGGAGTACAATGT 57.181 39.130 0.00 0.00 0.00 2.71
7258 7628 7.687941 ATTTGTTTACAGAGGGAGTACAATG 57.312 36.000 0.00 0.00 0.00 2.82
7264 7634 7.988028 GCTCTTATATTTGTTTACAGAGGGAGT 59.012 37.037 0.00 0.00 0.00 3.85
7265 7635 7.169982 CGCTCTTATATTTGTTTACAGAGGGAG 59.830 40.741 4.76 0.00 36.40 4.30
7266 7636 6.984474 CGCTCTTATATTTGTTTACAGAGGGA 59.016 38.462 4.76 0.00 36.40 4.20
7267 7637 6.761714 ACGCTCTTATATTTGTTTACAGAGGG 59.238 38.462 8.36 8.36 38.95 4.30
7268 7638 7.772332 ACGCTCTTATATTTGTTTACAGAGG 57.228 36.000 0.00 0.00 0.00 3.69
7313 7683 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
7314 7684 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
7315 7685 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
7316 7686 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
7317 7687 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
7318 7688 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
7319 7689 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
7320 7690 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
7321 7691 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
7322 7692 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
7323 7693 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
7324 7694 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
7325 7695 9.866655 TTAGTACTCCCTCCGTAAAGAAATATA 57.133 33.333 0.00 0.00 0.00 0.86
7326 7696 8.773033 TTAGTACTCCCTCCGTAAAGAAATAT 57.227 34.615 0.00 0.00 0.00 1.28
7327 7697 8.593945 TTTAGTACTCCCTCCGTAAAGAAATA 57.406 34.615 0.00 0.00 0.00 1.40
7328 7698 7.179872 ACTTTAGTACTCCCTCCGTAAAGAAAT 59.820 37.037 14.43 0.00 33.58 2.17
7329 7699 6.494835 ACTTTAGTACTCCCTCCGTAAAGAAA 59.505 38.462 14.43 0.00 33.58 2.52
7330 7700 6.012745 ACTTTAGTACTCCCTCCGTAAAGAA 58.987 40.000 14.43 0.00 33.58 2.52
7331 7701 5.574188 ACTTTAGTACTCCCTCCGTAAAGA 58.426 41.667 14.43 0.00 33.58 2.52
7332 7702 5.911378 ACTTTAGTACTCCCTCCGTAAAG 57.089 43.478 0.00 3.80 34.87 1.85
7333 7703 6.948309 ACTAACTTTAGTACTCCCTCCGTAAA 59.052 38.462 0.00 0.00 41.92 2.01
7334 7704 6.485171 ACTAACTTTAGTACTCCCTCCGTAA 58.515 40.000 0.00 0.00 41.92 3.18
7335 7705 6.067217 ACTAACTTTAGTACTCCCTCCGTA 57.933 41.667 0.00 0.00 41.92 4.02
7336 7706 4.928263 ACTAACTTTAGTACTCCCTCCGT 58.072 43.478 0.00 0.00 41.92 4.69
7347 7717 9.617975 GTATCTCAACGTTGTACTAACTTTAGT 57.382 33.333 26.47 6.85 45.39 2.24
7348 7718 9.837525 AGTATCTCAACGTTGTACTAACTTTAG 57.162 33.333 26.47 13.07 36.82 1.85
7356 7726 8.932791 CCAAAATAAGTATCTCAACGTTGTACT 58.067 33.333 26.47 22.25 0.00 2.73
7357 7727 8.173130 CCCAAAATAAGTATCTCAACGTTGTAC 58.827 37.037 26.47 20.55 0.00 2.90
7358 7728 8.095792 TCCCAAAATAAGTATCTCAACGTTGTA 58.904 33.333 26.47 16.80 0.00 2.41
7359 7729 6.938030 TCCCAAAATAAGTATCTCAACGTTGT 59.062 34.615 26.47 11.39 0.00 3.32
7360 7730 7.241376 GTCCCAAAATAAGTATCTCAACGTTG 58.759 38.462 22.35 22.35 0.00 4.10
7361 7731 6.091713 CGTCCCAAAATAAGTATCTCAACGTT 59.908 38.462 0.00 0.00 0.00 3.99
7362 7732 5.579511 CGTCCCAAAATAAGTATCTCAACGT 59.420 40.000 0.00 0.00 0.00 3.99
7363 7733 5.006358 CCGTCCCAAAATAAGTATCTCAACG 59.994 44.000 0.00 0.00 0.00 4.10
7364 7734 6.110707 TCCGTCCCAAAATAAGTATCTCAAC 58.889 40.000 0.00 0.00 0.00 3.18
7365 7735 6.302535 TCCGTCCCAAAATAAGTATCTCAA 57.697 37.500 0.00 0.00 0.00 3.02
7366 7736 5.163343 CCTCCGTCCCAAAATAAGTATCTCA 60.163 44.000 0.00 0.00 0.00 3.27
7367 7737 5.298347 CCTCCGTCCCAAAATAAGTATCTC 58.702 45.833 0.00 0.00 0.00 2.75
7368 7738 4.102681 CCCTCCGTCCCAAAATAAGTATCT 59.897 45.833 0.00 0.00 0.00 1.98
7369 7739 4.102054 TCCCTCCGTCCCAAAATAAGTATC 59.898 45.833 0.00 0.00 0.00 2.24
7370 7740 4.042174 TCCCTCCGTCCCAAAATAAGTAT 58.958 43.478 0.00 0.00 0.00 2.12
7371 7741 3.452878 TCCCTCCGTCCCAAAATAAGTA 58.547 45.455 0.00 0.00 0.00 2.24
7372 7742 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
7373 7743 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
7374 7744 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
7375 7745 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
7376 7746 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
7377 7747 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
7378 7748 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
7379 7749 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
7380 7750 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
7381 7751 1.273759 AAAACTACTCCCTCCGTCCC 58.726 55.000 0.00 0.00 0.00 4.46
7382 7752 4.502016 CTTAAAAACTACTCCCTCCGTCC 58.498 47.826 0.00 0.00 0.00 4.79
7383 7753 4.502016 CCTTAAAAACTACTCCCTCCGTC 58.498 47.826 0.00 0.00 0.00 4.79
7384 7754 3.307269 GCCTTAAAAACTACTCCCTCCGT 60.307 47.826 0.00 0.00 0.00 4.69
7385 7755 3.268330 GCCTTAAAAACTACTCCCTCCG 58.732 50.000 0.00 0.00 0.00 4.63
7386 7756 4.262617 CTGCCTTAAAAACTACTCCCTCC 58.737 47.826 0.00 0.00 0.00 4.30
7387 7757 4.907809 ACTGCCTTAAAAACTACTCCCTC 58.092 43.478 0.00 0.00 0.00 4.30
7388 7758 4.995624 ACTGCCTTAAAAACTACTCCCT 57.004 40.909 0.00 0.00 0.00 4.20
7389 7759 4.825634 ACAACTGCCTTAAAAACTACTCCC 59.174 41.667 0.00 0.00 0.00 4.30
7390 7760 5.758924 CACAACTGCCTTAAAAACTACTCC 58.241 41.667 0.00 0.00 0.00 3.85
7391 7761 5.008712 AGCACAACTGCCTTAAAAACTACTC 59.991 40.000 0.00 0.00 45.53 2.59
7392 7762 4.887655 AGCACAACTGCCTTAAAAACTACT 59.112 37.500 0.00 0.00 45.53 2.57
7393 7763 5.183014 AGCACAACTGCCTTAAAAACTAC 57.817 39.130 0.00 0.00 45.53 2.73
7394 7764 4.277423 GGAGCACAACTGCCTTAAAAACTA 59.723 41.667 0.00 0.00 45.53 2.24
7395 7765 3.068165 GGAGCACAACTGCCTTAAAAACT 59.932 43.478 0.00 0.00 45.53 2.66
7396 7766 3.181480 TGGAGCACAACTGCCTTAAAAAC 60.181 43.478 0.00 0.00 45.53 2.43
7397 7767 3.027412 TGGAGCACAACTGCCTTAAAAA 58.973 40.909 0.00 0.00 45.53 1.94
7410 7780 0.766674 ACCCTGTACCTTGGAGCACA 60.767 55.000 0.00 0.00 0.00 4.57
7411 7781 0.036294 GACCCTGTACCTTGGAGCAC 60.036 60.000 0.00 0.00 0.00 4.40
7418 7788 2.900546 CAGACTCAAGACCCTGTACCTT 59.099 50.000 0.00 0.00 0.00 3.50
7419 7789 2.110188 TCAGACTCAAGACCCTGTACCT 59.890 50.000 0.00 0.00 0.00 3.08
7426 7796 2.093921 GCCTACTTCAGACTCAAGACCC 60.094 54.545 0.00 0.00 0.00 4.46
7427 7797 2.563179 TGCCTACTTCAGACTCAAGACC 59.437 50.000 0.00 0.00 0.00 3.85
7433 7803 3.622630 TCCTACTGCCTACTTCAGACTC 58.377 50.000 0.00 0.00 35.61 3.36
7452 7822 6.944290 TCATTATCTGATTTCACATGGGATCC 59.056 38.462 1.92 1.92 0.00 3.36
7453 7823 7.446319 TGTCATTATCTGATTTCACATGGGATC 59.554 37.037 0.00 0.00 35.97 3.36
7464 7834 8.225603 ACGGCTAAATTGTCATTATCTGATTT 57.774 30.769 0.00 0.00 35.97 2.17
7487 7857 4.219033 GCTTGGAAAATGTAACACTGACG 58.781 43.478 0.00 0.00 0.00 4.35
7490 7860 4.278170 TCAGGCTTGGAAAATGTAACACTG 59.722 41.667 0.00 0.00 0.00 3.66
7493 7863 4.469657 AGTCAGGCTTGGAAAATGTAACA 58.530 39.130 0.00 0.00 0.00 2.41
7500 7870 3.222173 TGCTTAGTCAGGCTTGGAAAA 57.778 42.857 0.00 0.00 0.00 2.29
7516 7886 5.690464 AAGATACAGGACTCAGATTGCTT 57.310 39.130 0.00 0.00 0.00 3.91
7519 7889 6.314896 GGTTCAAAGATACAGGACTCAGATTG 59.685 42.308 0.00 0.00 0.00 2.67
7524 7894 3.056107 CCGGTTCAAAGATACAGGACTCA 60.056 47.826 0.00 0.00 32.20 3.41
7541 7911 2.200373 AACAGAAGCAATAGCCGGTT 57.800 45.000 1.90 0.00 43.56 4.44
7546 7916 5.362556 TCAACAGAAACAGAAGCAATAGC 57.637 39.130 0.00 0.00 42.56 2.97
7553 7923 8.040132 AGAATCTAGGATCAACAGAAACAGAAG 58.960 37.037 0.00 0.00 0.00 2.85
7555 7925 7.487822 AGAATCTAGGATCAACAGAAACAGA 57.512 36.000 0.00 0.00 0.00 3.41
7559 7929 8.083828 AGCTTAGAATCTAGGATCAACAGAAA 57.916 34.615 3.42 0.00 0.00 2.52
7563 7933 7.187824 ACAAGCTTAGAATCTAGGATCAACA 57.812 36.000 0.00 0.00 0.00 3.33
7570 7940 4.688021 AGCGAACAAGCTTAGAATCTAGG 58.312 43.478 0.00 0.00 46.80 3.02
7590 8121 8.341173 CAGATGAACTCACAGGAATTTAATAGC 58.659 37.037 0.00 0.00 0.00 2.97
7614 8145 4.764679 TTGCATAACAAGTGGTTAGCAG 57.235 40.909 11.77 0.89 44.74 4.24
7628 8159 6.550481 TCCTTCATCATTGCCTAATTGCATAA 59.450 34.615 0.00 0.00 41.70 1.90
7687 8218 1.136000 TGCTCATCGTTGCATGTTTCG 60.136 47.619 0.00 0.00 33.94 3.46
7742 8273 3.076621 TGTACTTCCTCAATGCTTGCAG 58.923 45.455 0.87 0.00 0.00 4.41
7751 8282 3.178046 TGCCATAGGTGTACTTCCTCAA 58.822 45.455 12.16 0.00 36.60 3.02
7774 8305 1.856012 GACTCGGCTTGCGATATGC 59.144 57.895 0.00 0.00 46.70 3.14
7783 8314 3.377759 AGCTGCTCGACTCGGCTT 61.378 61.111 9.75 0.00 43.10 4.35
7848 8379 5.819991 AGCACAGGGAAGAAAGATTGATTA 58.180 37.500 0.00 0.00 0.00 1.75
7850 8381 4.313020 AGCACAGGGAAGAAAGATTGAT 57.687 40.909 0.00 0.00 0.00 2.57
7855 8386 1.956477 GCAAAGCACAGGGAAGAAAGA 59.044 47.619 0.00 0.00 0.00 2.52
7970 8507 6.218746 GTTTCTTCCTTGCAGATGAATTTGT 58.781 36.000 5.47 0.00 32.05 2.83
7981 8518 4.280677 CCAAGTTATGGTTTCTTCCTTGCA 59.719 41.667 0.00 0.00 44.85 4.08
8213 8754 5.880332 CACATACTACAAGCCAAACCACTAT 59.120 40.000 0.00 0.00 0.00 2.12
8214 8755 5.012251 TCACATACTACAAGCCAAACCACTA 59.988 40.000 0.00 0.00 0.00 2.74
8329 8879 2.426522 TCACAGGCCATTTTCTCTTCG 58.573 47.619 5.01 0.00 0.00 3.79
8332 8882 6.628844 GCAATAAATCACAGGCCATTTTCTCT 60.629 38.462 5.01 0.00 0.00 3.10
8360 8910 6.374333 TCTCATTTCTGCCAATTACTGTAACC 59.626 38.462 1.73 0.00 0.00 2.85
8361 8911 7.377766 TCTCATTTCTGCCAATTACTGTAAC 57.622 36.000 1.73 0.00 0.00 2.50
8375 8928 5.381174 TTGCATGAAGGTTCTCATTTCTG 57.619 39.130 0.00 0.00 33.66 3.02
8378 8931 8.149647 TGTATTTTTGCATGAAGGTTCTCATTT 58.850 29.630 0.00 0.00 33.66 2.32
8381 8934 6.647334 TGTATTTTTGCATGAAGGTTCTCA 57.353 33.333 0.00 0.00 0.00 3.27
8382 8935 9.807649 AATATGTATTTTTGCATGAAGGTTCTC 57.192 29.630 0.00 0.00 0.00 2.87
8412 8965 1.818060 CCCAATCCAATTTCAGCGTGA 59.182 47.619 0.00 0.00 0.00 4.35
8599 9159 2.523168 TCCTGCAGGTGGACGTCA 60.523 61.111 31.58 7.59 36.34 4.35
9224 9787 2.736144 ACGCCGTGAACTATCTGAAA 57.264 45.000 0.00 0.00 0.00 2.69
9245 9808 2.511600 GTGCCCAAGATCGTCCGG 60.512 66.667 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.