Multiple sequence alignment - TraesCS7B01G137900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G137900 chr7B 100.000 8082 0 0 1 8082 173066132 173058051 0.000000e+00 14925.0
1 TraesCS7B01G137900 chr7B 88.551 559 47 10 13 568 620602055 620601511 0.000000e+00 662.0
2 TraesCS7B01G137900 chr7B 82.732 388 36 13 974 1343 439452775 439453149 4.710000e-82 316.0
3 TraesCS7B01G137900 chr7B 82.573 241 38 3 7772 8009 527689249 527689488 8.220000e-50 209.0
4 TraesCS7B01G137900 chr7B 81.517 211 31 8 7773 7980 76882218 76882423 5.020000e-37 167.0
5 TraesCS7B01G137900 chr7B 86.897 145 8 1 2458 2591 45052801 45052657 1.400000e-32 152.0
6 TraesCS7B01G137900 chr7B 95.745 47 1 1 2011 2056 439454466 439454512 3.130000e-09 75.0
7 TraesCS7B01G137900 chr7D 94.104 4223 149 40 3505 7669 222767181 222763001 0.000000e+00 6327.0
8 TraesCS7B01G137900 chr7D 94.083 1352 62 15 1006 2343 222769667 222768320 0.000000e+00 2037.0
9 TraesCS7B01G137900 chr7D 83.886 1961 193 48 4849 6779 421457190 421455323 0.000000e+00 1757.0
10 TraesCS7B01G137900 chr7D 94.306 843 28 10 2587 3415 222768324 222767488 0.000000e+00 1273.0
11 TraesCS7B01G137900 chr7D 83.585 597 63 19 1 568 572414342 572414932 2.000000e-145 527.0
12 TraesCS7B01G137900 chr7D 93.064 346 20 2 7664 8009 222762961 222762620 3.370000e-138 503.0
13 TraesCS7B01G137900 chr7D 82.887 485 62 9 4347 4813 421457674 421457193 4.510000e-112 416.0
14 TraesCS7B01G137900 chr7D 88.498 313 28 6 3949 4260 421457976 421457671 9.910000e-99 372.0
15 TraesCS7B01G137900 chr7D 75.219 686 77 36 974 1611 421460622 421459982 1.050000e-58 239.0
16 TraesCS7B01G137900 chr7D 83.267 251 36 5 7756 8003 333757505 333757258 8.160000e-55 226.0
17 TraesCS7B01G137900 chr7D 94.400 125 6 1 567 691 222770012 222769889 2.980000e-44 191.0
18 TraesCS7B01G137900 chr7D 76.427 403 64 21 6924 7309 246644428 246644040 1.070000e-43 189.0
19 TraesCS7B01G137900 chr7D 96.078 102 3 1 2364 2464 205230550 205230651 1.800000e-36 165.0
20 TraesCS7B01G137900 chr7D 95.050 101 5 0 3405 3505 222767405 222767305 8.400000e-35 159.0
21 TraesCS7B01G137900 chr7D 83.626 171 15 5 3588 3755 421458262 421458102 1.820000e-31 148.0
22 TraesCS7B01G137900 chr7D 80.000 155 26 3 7846 7997 6503541 6503693 8.580000e-20 110.0
23 TraesCS7B01G137900 chr7D 91.781 73 6 0 8010 8082 222762582 222762510 1.430000e-17 102.0
24 TraesCS7B01G137900 chr7D 80.531 113 14 7 7895 8003 102395843 102395735 6.720000e-11 80.5
25 TraesCS7B01G137900 chr7D 100.000 36 0 0 974 1009 222769894 222769859 5.230000e-07 67.6
26 TraesCS7B01G137900 chr7D 96.774 31 1 0 3738 3768 421458165 421458135 1.500000e-02 52.8
27 TraesCS7B01G137900 chr7A 85.393 1958 203 43 4843 6779 463415313 463413418 0.000000e+00 1954.0
28 TraesCS7B01G137900 chr7A 83.945 2099 207 57 4851 6924 511520553 511522546 0.000000e+00 1890.0
29 TraesCS7B01G137900 chr7A 87.781 1424 116 22 3766 5168 237668724 237670110 0.000000e+00 1613.0
30 TraesCS7B01G137900 chr7A 93.002 886 56 4 5700 6581 237705370 237706253 0.000000e+00 1288.0
31 TraesCS7B01G137900 chr7A 89.206 806 54 15 974 1768 237574186 237574969 0.000000e+00 976.0
32 TraesCS7B01G137900 chr7A 91.827 624 29 6 3766 4367 237609071 237609694 0.000000e+00 850.0
33 TraesCS7B01G137900 chr7A 85.217 805 81 18 4365 5168 237631769 237632536 0.000000e+00 793.0
34 TraesCS7B01G137900 chr7A 91.219 558 34 3 5163 5705 237674801 237675358 0.000000e+00 745.0
35 TraesCS7B01G137900 chr7A 80.980 1020 94 31 3804 4790 463416264 463415312 0.000000e+00 717.0
36 TraesCS7B01G137900 chr7A 82.346 878 73 36 2587 3396 237607801 237608664 0.000000e+00 688.0
37 TraesCS7B01G137900 chr7A 80.752 878 87 36 2587 3396 237667455 237668318 1.930000e-170 610.0
38 TraesCS7B01G137900 chr7A 89.756 410 23 2 3766 4156 237773010 237773419 2.600000e-139 507.0
39 TraesCS7B01G137900 chr7A 95.623 297 8 3 690 984 231100323 231100616 9.490000e-129 472.0
40 TraesCS7B01G137900 chr7A 88.959 317 25 8 3941 4257 511519752 511520058 4.580000e-102 383.0
41 TraesCS7B01G137900 chr7A 93.578 218 14 0 6578 6795 237732542 237732759 7.820000e-85 326.0
42 TraesCS7B01G137900 chr7A 84.570 337 33 12 3405 3723 237668389 237668724 4.710000e-82 316.0
43 TraesCS7B01G137900 chr7A 84.366 339 31 14 3405 3723 237608735 237609071 6.090000e-81 313.0
44 TraesCS7B01G137900 chr7A 84.366 339 31 11 3405 3723 237772674 237773010 6.090000e-81 313.0
45 TraesCS7B01G137900 chr7A 85.385 260 21 7 974 1224 463419182 463418931 3.740000e-63 254.0
46 TraesCS7B01G137900 chr7A 78.933 375 25 23 1995 2343 237607459 237607805 1.060000e-48 206.0
47 TraesCS7B01G137900 chr7A 86.897 145 7 9 2458 2591 26883175 26883032 1.400000e-32 152.0
48 TraesCS7B01G137900 chr7A 81.538 195 23 7 7437 7623 15844869 15845058 1.820000e-31 148.0
49 TraesCS7B01G137900 chr7A 87.302 126 15 1 1838 1962 237666987 237667112 8.450000e-30 143.0
50 TraesCS7B01G137900 chr7A 100.000 32 0 0 3737 3768 463416342 463416311 8.760000e-05 60.2
51 TraesCS7B01G137900 chr5B 89.088 559 57 4 13 568 548560176 548560733 0.000000e+00 691.0
52 TraesCS7B01G137900 chr5B 96.897 290 4 3 690 977 669691255 669690969 1.580000e-131 481.0
53 TraesCS7B01G137900 chr5B 85.714 350 47 3 213 560 483004498 483004846 4.610000e-97 366.0
54 TraesCS7B01G137900 chr5B 88.889 126 10 4 2336 2459 615694725 615694602 1.400000e-32 152.0
55 TraesCS7B01G137900 chr3B 89.107 560 55 6 13 568 777198058 777197501 0.000000e+00 691.0
56 TraesCS7B01G137900 chr3B 84.327 587 69 12 1 567 594746902 594746319 3.300000e-153 553.0
57 TraesCS7B01G137900 chr3B 90.345 145 3 4 2458 2591 508729211 508729067 6.440000e-41 180.0
58 TraesCS7B01G137900 chr3B 88.356 146 6 1 2458 2592 779221361 779221506 1.800000e-36 165.0
59 TraesCS7B01G137900 chr6B 88.183 567 57 7 1 563 216351924 216352484 0.000000e+00 667.0
60 TraesCS7B01G137900 chr6B 85.821 536 69 6 28 561 86670276 86670806 5.480000e-156 562.0
61 TraesCS7B01G137900 chr6B 90.411 146 3 1 2458 2592 623382145 623382000 1.790000e-41 182.0
62 TraesCS7B01G137900 chr6B 88.966 145 5 1 2458 2591 598447550 598447694 1.390000e-37 169.0
63 TraesCS7B01G137900 chr6B 94.231 104 3 3 2364 2466 15708268 15708167 1.090000e-33 156.0
64 TraesCS7B01G137900 chr6B 77.027 296 43 21 6924 7213 124277445 124277169 6.540000e-31 147.0
65 TraesCS7B01G137900 chrUn 90.065 463 36 9 113 568 468948527 468948068 6.980000e-165 592.0
66 TraesCS7B01G137900 chrUn 96.040 101 3 1 2364 2463 119331473 119331573 6.490000e-36 163.0
67 TraesCS7B01G137900 chrUn 83.237 173 13 7 7150 7307 6868861 6869032 2.350000e-30 145.0
68 TraesCS7B01G137900 chrUn 74.555 393 68 20 6933 7309 20454793 20454417 8.450000e-30 143.0
69 TraesCS7B01G137900 chrUn 74.485 388 65 19 6939 7309 105147928 105148298 3.930000e-28 137.0
70 TraesCS7B01G137900 chrUn 81.143 175 16 8 7150 7309 27840714 27840886 3.060000e-24 124.0
71 TraesCS7B01G137900 chrUn 85.714 119 14 3 7150 7267 91752400 91752284 1.100000e-23 122.0
72 TraesCS7B01G137900 chrUn 80.571 175 17 8 7150 7309 111570202 111570374 1.420000e-22 119.0
73 TraesCS7B01G137900 chrUn 74.114 367 59 23 6924 7267 218342098 218342451 1.420000e-22 119.0
74 TraesCS7B01G137900 chrUn 83.594 128 17 4 7141 7267 477527921 477528045 5.120000e-22 117.0
75 TraesCS7B01G137900 chr3D 83.986 587 66 14 1 563 535729464 535730046 9.230000e-149 538.0
76 TraesCS7B01G137900 chr3D 85.859 297 40 2 268 563 179219647 179219352 1.690000e-81 315.0
77 TraesCS7B01G137900 chr3D 89.655 145 4 3 2458 2591 561708010 561708154 3.000000e-39 174.0
78 TraesCS7B01G137900 chr3D 83.146 89 10 5 7917 8003 52273106 52273021 8.700000e-10 76.8
79 TraesCS7B01G137900 chr4B 82.333 600 75 17 1 573 621685798 621686393 7.290000e-135 492.0
80 TraesCS7B01G137900 chr4B 81.176 340 55 8 6929 7263 253669116 253669451 1.730000e-66 265.0
81 TraesCS7B01G137900 chr4B 94.845 97 3 2 2364 2459 340373889 340373794 5.050000e-32 150.0
82 TraesCS7B01G137900 chr4B 75.815 368 44 23 6980 7309 366121590 366121950 2.350000e-30 145.0
83 TraesCS7B01G137900 chr5A 97.232 289 5 1 690 978 693141409 693141124 3.390000e-133 486.0
84 TraesCS7B01G137900 chr5A 84.647 241 25 8 7408 7639 131537145 131536908 6.310000e-56 230.0
85 TraesCS7B01G137900 chr5A 81.116 233 37 7 7773 8003 38534267 38534040 6.440000e-41 180.0
86 TraesCS7B01G137900 chr5A 89.116 147 4 5 2458 2592 555234567 555234713 1.080000e-38 172.0
87 TraesCS7B01G137900 chr5A 81.592 201 30 7 7783 7980 462171239 462171435 8.400000e-35 159.0
88 TraesCS7B01G137900 chr5A 78.440 218 40 7 7757 7972 412801633 412801845 1.410000e-27 135.0
89 TraesCS7B01G137900 chr1A 97.552 286 4 2 688 973 252325441 252325159 3.390000e-133 486.0
90 TraesCS7B01G137900 chr1A 91.453 117 8 2 2364 2478 354304659 354304543 8.400000e-35 159.0
91 TraesCS7B01G137900 chr1A 88.235 119 11 3 7150 7267 156125055 156124939 1.090000e-28 139.0
92 TraesCS7B01G137900 chr1A 84.146 82 10 3 7917 7997 59229686 59229765 8.700000e-10 76.8
93 TraesCS7B01G137900 chr2B 97.535 284 4 1 689 972 481660141 481659861 4.390000e-132 483.0
94 TraesCS7B01G137900 chr2B 97.535 284 4 1 691 974 635083609 635083329 4.390000e-132 483.0
95 TraesCS7B01G137900 chr2B 97.153 281 5 1 690 970 81318791 81319068 9.490000e-129 472.0
96 TraesCS7B01G137900 chr2B 84.935 385 37 14 1 368 209247932 209247552 3.560000e-98 370.0
97 TraesCS7B01G137900 chr2B 89.655 145 4 4 2458 2591 414554722 414554578 3.000000e-39 174.0
98 TraesCS7B01G137900 chr2B 92.727 110 7 1 2364 2472 41180949 41180840 3.020000e-34 158.0
99 TraesCS7B01G137900 chr2B 85.714 119 14 3 7150 7267 233537710 233537594 1.100000e-23 122.0
100 TraesCS7B01G137900 chr6A 97.527 283 4 1 691 973 133803115 133802836 1.580000e-131 481.0
101 TraesCS7B01G137900 chr6A 76.359 423 52 24 6924 7309 449287717 449288128 4.980000e-42 183.0
102 TraesCS7B01G137900 chr6A 89.655 145 3 2 2458 2591 16232492 16232635 3.000000e-39 174.0
103 TraesCS7B01G137900 chr6A 74.855 346 66 16 6924 7267 411497272 411497598 3.930000e-28 137.0
104 TraesCS7B01G137900 chr2A 97.527 283 4 1 691 973 692745886 692745607 1.580000e-131 481.0
105 TraesCS7B01G137900 chr2A 90.411 146 3 4 2458 2592 177665662 177665807 1.790000e-41 182.0
106 TraesCS7B01G137900 chr2A 86.897 145 7 2 2458 2591 552297532 552297389 1.400000e-32 152.0
107 TraesCS7B01G137900 chr4D 86.364 396 40 11 1 385 439219653 439219261 3.490000e-113 420.0
108 TraesCS7B01G137900 chr4D 89.600 125 11 2 2364 2487 46028605 46028728 3.020000e-34 158.0
109 TraesCS7B01G137900 chr4D 76.786 336 38 22 7009 7307 164237119 164237451 1.400000e-32 152.0
110 TraesCS7B01G137900 chr4D 75.145 346 68 15 6924 7267 382102543 382102214 6.540000e-31 147.0
111 TraesCS7B01G137900 chr4D 75.676 333 55 15 6992 7309 358952850 358953171 8.450000e-30 143.0
112 TraesCS7B01G137900 chr4D 82.857 175 13 8 7150 7309 190572368 190572540 3.040000e-29 141.0
113 TraesCS7B01G137900 chr4D 82.286 175 14 8 7150 7309 14370901 14371073 1.410000e-27 135.0
114 TraesCS7B01G137900 chr4D 82.286 175 14 7 7150 7309 152108614 152108442 1.410000e-27 135.0
115 TraesCS7B01G137900 chr4D 87.395 119 12 3 7150 7267 272421499 272421383 5.090000e-27 134.0
116 TraesCS7B01G137900 chr4D 83.636 110 15 3 7895 8003 416610997 416610890 5.160000e-17 100.0
117 TraesCS7B01G137900 chr4D 82.727 110 16 3 7895 8003 416681361 416681254 2.400000e-15 95.3
118 TraesCS7B01G137900 chr4D 81.053 95 13 5 7917 8009 370701386 370701295 4.050000e-08 71.3
119 TraesCS7B01G137900 chr6D 77.489 653 120 23 5474 6109 107924849 107924207 4.610000e-97 366.0
120 TraesCS7B01G137900 chr6D 78.286 350 51 18 6975 7309 310904999 310905338 1.380000e-47 202.0
121 TraesCS7B01G137900 chr6D 76.567 367 57 18 6924 7267 216539095 216538735 3.000000e-39 174.0
122 TraesCS7B01G137900 chr6D 82.857 175 13 8 7150 7309 406077298 406077126 3.040000e-29 141.0
123 TraesCS7B01G137900 chr6D 85.393 89 8 5 7917 8003 438196612 438196527 4.020000e-13 87.9
124 TraesCS7B01G137900 chr6D 83.133 83 9 5 7917 7997 126933405 126933484 4.050000e-08 71.3
125 TraesCS7B01G137900 chr4A 84.651 215 29 4 7050 7261 300562690 300562477 2.290000e-50 211.0
126 TraesCS7B01G137900 chr4A 88.182 110 12 1 7895 8003 544236812 544236703 6.580000e-26 130.0
127 TraesCS7B01G137900 chr5D 83.333 228 33 5 7772 7997 343956734 343956958 1.060000e-48 206.0
128 TraesCS7B01G137900 chr5D 86.335 161 15 5 7150 7309 228650489 228650335 1.390000e-37 169.0
129 TraesCS7B01G137900 chr5D 96.970 99 3 0 2458 2556 115404178 115404276 5.020000e-37 167.0
130 TraesCS7B01G137900 chr5D 87.755 147 6 9 2458 2592 53741215 53741069 2.330000e-35 161.0
131 TraesCS7B01G137900 chr5D 82.090 134 19 5 7868 7998 330935293 330935162 8.580000e-20 110.0
132 TraesCS7B01G137900 chr5D 80.800 125 20 4 7886 8009 109447815 109447694 2.400000e-15 95.3
133 TraesCS7B01G137900 chr5D 83.133 83 9 5 7917 7997 272852914 272852993 4.050000e-08 71.3
134 TraesCS7B01G137900 chr2D 81.961 255 35 4 7407 7651 276892009 276891756 1.060000e-48 206.0
135 TraesCS7B01G137900 chr2D 83.333 204 28 6 7789 7990 450879966 450880165 4.980000e-42 183.0
136 TraesCS7B01G137900 chr2D 76.235 425 52 28 6924 7309 227689307 227688893 6.440000e-41 180.0
137 TraesCS7B01G137900 chr1D 77.713 341 52 13 6985 7309 120832124 120831792 3.850000e-43 187.0
138 TraesCS7B01G137900 chr1D 77.198 364 54 18 6924 7263 193781288 193781646 1.390000e-42 185.0
139 TraesCS7B01G137900 chr1D 74.704 423 57 30 6924 7309 290096971 290096562 8.450000e-30 143.0
140 TraesCS7B01G137900 chr1D 76.254 299 53 13 6972 7267 341716678 341716395 8.450000e-30 143.0
141 TraesCS7B01G137900 chr1D 82.857 175 13 8 7150 7309 213034778 213034606 3.040000e-29 141.0
142 TraesCS7B01G137900 chr1D 82.857 175 13 8 7150 7309 327843217 327843389 3.040000e-29 141.0
143 TraesCS7B01G137900 chr1D 88.235 119 11 3 7150 7267 147500663 147500779 1.090000e-28 139.0
144 TraesCS7B01G137900 chr3A 89.726 146 4 4 2458 2592 725562660 725562515 8.340000e-40 176.0
145 TraesCS7B01G137900 chr3A 89.726 146 4 4 2458 2592 725604989 725604844 8.340000e-40 176.0
146 TraesCS7B01G137900 chr3A 75.765 425 54 28 6924 7309 248001531 248001945 1.390000e-37 169.0
147 TraesCS7B01G137900 chr1B 87.586 145 7 1 2458 2591 484209313 484209169 3.020000e-34 158.0
148 TraesCS7B01G137900 chr1B 90.000 120 8 4 2364 2481 578093587 578093704 1.400000e-32 152.0
149 TraesCS7B01G137900 chr1B 77.907 172 31 7 6981 7149 463418537 463418704 5.160000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G137900 chr7B 173058051 173066132 8081 True 14925.000000 14925 100.000000 1 8082 1 chr7B.!!$R2 8081
1 TraesCS7B01G137900 chr7B 620601511 620602055 544 True 662.000000 662 88.551000 13 568 1 chr7B.!!$R3 555
2 TraesCS7B01G137900 chr7D 222762510 222770012 7502 True 1332.450000 6327 94.598500 567 8082 8 chr7D.!!$R4 7515
3 TraesCS7B01G137900 chr7D 572414342 572414932 590 False 527.000000 527 83.585000 1 568 1 chr7D.!!$F3 567
4 TraesCS7B01G137900 chr7D 421455323 421460622 5299 True 497.466667 1757 85.148333 974 6779 6 chr7D.!!$R5 5805
5 TraesCS7B01G137900 chr7A 237705370 237706253 883 False 1288.000000 1288 93.002000 5700 6581 1 chr7A.!!$F6 881
6 TraesCS7B01G137900 chr7A 511519752 511522546 2794 False 1136.500000 1890 86.452000 3941 6924 2 chr7A.!!$F11 2983
7 TraesCS7B01G137900 chr7A 237574186 237574969 783 False 976.000000 976 89.206000 974 1768 1 chr7A.!!$F3 794
8 TraesCS7B01G137900 chr7A 237631769 237632536 767 False 793.000000 793 85.217000 4365 5168 1 chr7A.!!$F4 803
9 TraesCS7B01G137900 chr7A 463413418 463419182 5764 True 746.300000 1954 87.939500 974 6779 4 chr7A.!!$R2 5805
10 TraesCS7B01G137900 chr7A 237674801 237675358 557 False 745.000000 745 91.219000 5163 5705 1 chr7A.!!$F5 542
11 TraesCS7B01G137900 chr7A 237666987 237670110 3123 False 670.500000 1613 85.101250 1838 5168 4 chr7A.!!$F9 3330
12 TraesCS7B01G137900 chr7A 237607459 237609694 2235 False 514.250000 850 84.368000 1995 4367 4 chr7A.!!$F8 2372
13 TraesCS7B01G137900 chr7A 237772674 237773419 745 False 410.000000 507 87.061000 3405 4156 2 chr7A.!!$F10 751
14 TraesCS7B01G137900 chr5B 548560176 548560733 557 False 691.000000 691 89.088000 13 568 1 chr5B.!!$F2 555
15 TraesCS7B01G137900 chr3B 777197501 777198058 557 True 691.000000 691 89.107000 13 568 1 chr3B.!!$R3 555
16 TraesCS7B01G137900 chr3B 594746319 594746902 583 True 553.000000 553 84.327000 1 567 1 chr3B.!!$R2 566
17 TraesCS7B01G137900 chr6B 216351924 216352484 560 False 667.000000 667 88.183000 1 563 1 chr6B.!!$F2 562
18 TraesCS7B01G137900 chr6B 86670276 86670806 530 False 562.000000 562 85.821000 28 561 1 chr6B.!!$F1 533
19 TraesCS7B01G137900 chr3D 535729464 535730046 582 False 538.000000 538 83.986000 1 563 1 chr3D.!!$F1 562
20 TraesCS7B01G137900 chr4B 621685798 621686393 595 False 492.000000 492 82.333000 1 573 1 chr4B.!!$F3 572
21 TraesCS7B01G137900 chr6D 107924207 107924849 642 True 366.000000 366 77.489000 5474 6109 1 chr6D.!!$R1 635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
711 749 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85 F
970 1008 0.639943 TCCCCACTATGACCAGCCTA 59.360 55.000 0.00 0.00 0.00 3.93 F
971 1009 1.009060 TCCCCACTATGACCAGCCTAA 59.991 52.381 0.00 0.00 0.00 2.69 F
2008 3142 1.134759 GTGGTGCCATGCATGCATTAA 60.135 47.619 30.32 15.70 41.91 1.40 F
2361 3549 2.005370 ACTACCTCCGTCTTGGTGAA 57.995 50.000 0.00 0.00 39.52 3.18 F
3342 5137 0.329261 CCTTCCCAGCCATGAGAACA 59.671 55.000 0.00 0.00 0.00 3.18 F
3710 5759 1.063174 GATCATTCCTCAAGCGTGTGC 59.937 52.381 0.00 0.00 43.24 4.57 F
4903 7040 1.120530 TACCCCTCTTCGATGCTTCC 58.879 55.000 0.00 0.00 0.00 3.46 F
5224 7364 0.037975 GAGAAACGTGGGGTCGCTAA 60.038 55.000 0.00 0.00 0.00 3.09 F
6638 8860 0.179234 TTGTGGTTCAGCGAACTCCA 59.821 50.000 16.93 12.28 41.70 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2577 3765 1.293062 TCACCCTACTACCTCCGTCT 58.707 55.000 0.00 0.00 0.00 4.18 R
2580 3768 1.479730 GGTTTCACCCTACTACCTCCG 59.520 57.143 0.00 0.00 30.04 4.63 R
2813 4009 4.021544 TGTGCCTTCATTTATGGAAACCAC 60.022 41.667 0.00 0.00 35.80 4.16 R
3127 4899 0.837272 ACCTATAGTTGCCACGCCAT 59.163 50.000 0.00 0.00 0.00 4.40 R
3704 5753 1.165907 ACTTGTCATGGGTGCACACG 61.166 55.000 20.43 2.98 0.00 4.49 R
4604 6729 0.458669 GAGAGCCCATGCCATTGTTG 59.541 55.000 0.00 0.00 38.69 3.33 R
5082 7222 0.964860 TGAATGCACCGGTCCATTGG 60.965 55.000 28.21 5.65 32.20 3.16 R
6638 8860 0.171455 GGATGAGTTGCTCGAGTCGT 59.829 55.000 15.13 4.68 32.35 4.34 R
6947 9186 0.398522 ACACCCTATGATCGGCCTCA 60.399 55.000 0.00 0.00 0.00 3.86 R
7941 10261 0.391263 GGGGTAAGCACAAGAGTCGG 60.391 60.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 46 9.830975 AAACAACCAAGCTAAAACAATCTTAAT 57.169 25.926 0.00 0.00 0.00 1.40
136 146 4.322123 GGAGGAGCTTACGTTTCTCTCTTT 60.322 45.833 0.00 0.00 0.00 2.52
173 183 3.284914 CGCAAAAACGATGAAGAAACGA 58.715 40.909 0.00 0.00 34.06 3.85
217 227 1.782752 AGGAGATGAGAGAGGGAGAGG 59.217 57.143 0.00 0.00 0.00 3.69
306 343 1.066716 TGAAATAACTGACCGGACCCG 60.067 52.381 9.46 0.66 39.44 5.28
342 380 1.436336 CGGTAGGGTTAGACAGGCG 59.564 63.158 0.00 0.00 0.00 5.52
420 458 2.165845 GTGCTGACGTGGATTACTACCT 59.834 50.000 0.00 0.00 0.00 3.08
450 488 0.171455 GTCTCTGACGGTAGGCTGTG 59.829 60.000 0.00 0.00 33.67 3.66
457 495 1.153706 CGGTAGGCTGTGTAACCCG 60.154 63.158 0.00 0.00 34.36 5.28
549 587 9.635404 ATCGTGAATTTATATGGAAAAAGGGTA 57.365 29.630 0.00 0.00 0.00 3.69
563 601 8.255905 TGGAAAAAGGGTAAAAACACGAAATTA 58.744 29.630 0.00 0.00 0.00 1.40
574 612 2.671396 ACACGAAATTAAGCCGCACTAG 59.329 45.455 0.00 0.00 0.00 2.57
640 678 1.604147 GAAATCCCAACGGGCCAAGG 61.604 60.000 4.39 0.96 43.94 3.61
687 725 7.440523 AATTGGAAACATATCGATAGCCTTC 57.559 36.000 11.41 11.65 42.32 3.46
688 726 4.894784 TGGAAACATATCGATAGCCTTCC 58.105 43.478 23.05 23.05 33.40 3.46
689 727 4.254492 GGAAACATATCGATAGCCTTCCC 58.746 47.826 21.02 11.39 0.00 3.97
690 728 4.020128 GGAAACATATCGATAGCCTTCCCT 60.020 45.833 21.02 0.00 0.00 4.20
691 729 5.187186 GGAAACATATCGATAGCCTTCCCTA 59.813 44.000 21.02 0.00 0.00 3.53
692 730 6.295688 GGAAACATATCGATAGCCTTCCCTAA 60.296 42.308 21.02 0.00 0.00 2.69
693 731 5.923733 ACATATCGATAGCCTTCCCTAAG 57.076 43.478 11.41 0.00 0.00 2.18
701 739 2.696864 CCTTCCCTAAGGCTGGTCA 58.303 57.895 0.00 0.00 45.78 4.02
702 740 1.216990 CCTTCCCTAAGGCTGGTCAT 58.783 55.000 0.00 0.00 45.78 3.06
703 741 2.408565 CCTTCCCTAAGGCTGGTCATA 58.591 52.381 0.00 0.00 45.78 2.15
704 742 2.370189 CCTTCCCTAAGGCTGGTCATAG 59.630 54.545 0.00 0.00 45.78 2.23
705 743 2.868964 TCCCTAAGGCTGGTCATAGT 57.131 50.000 0.00 0.00 0.00 2.12
706 744 2.398588 TCCCTAAGGCTGGTCATAGTG 58.601 52.381 0.00 0.00 0.00 2.74
707 745 1.417890 CCCTAAGGCTGGTCATAGTGG 59.582 57.143 0.00 0.00 0.00 4.00
708 746 1.417890 CCTAAGGCTGGTCATAGTGGG 59.582 57.143 0.00 0.00 0.00 4.61
709 747 2.398588 CTAAGGCTGGTCATAGTGGGA 58.601 52.381 0.00 0.00 0.00 4.37
710 748 1.207791 AAGGCTGGTCATAGTGGGAG 58.792 55.000 0.00 0.00 0.00 4.30
711 749 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
712 750 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
713 751 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
714 752 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
715 753 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
716 754 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
717 755 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
718 756 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
719 757 4.899457 TGGTCATAGTGGGAGTAACATAGG 59.101 45.833 0.00 0.00 0.00 2.57
720 758 4.900054 GGTCATAGTGGGAGTAACATAGGT 59.100 45.833 0.00 0.00 0.00 3.08
721 759 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
722 760 6.208994 GGTCATAGTGGGAGTAACATAGGTAG 59.791 46.154 0.00 0.00 0.00 3.18
723 761 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
724 762 7.941238 GTCATAGTGGGAGTAACATAGGTAGTA 59.059 40.741 0.00 0.00 0.00 1.82
725 763 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
726 764 8.574737 CATAGTGGGAGTAACATAGGTAGTAAC 58.425 40.741 0.00 0.00 0.00 2.50
727 765 6.496743 AGTGGGAGTAACATAGGTAGTAACA 58.503 40.000 0.00 0.00 0.00 2.41
728 766 7.130775 AGTGGGAGTAACATAGGTAGTAACAT 58.869 38.462 0.00 0.00 0.00 2.71
729 767 8.284435 AGTGGGAGTAACATAGGTAGTAACATA 58.716 37.037 0.00 0.00 0.00 2.29
730 768 8.574737 GTGGGAGTAACATAGGTAGTAACATAG 58.425 40.741 0.00 0.00 0.00 2.23
731 769 8.505246 TGGGAGTAACATAGGTAGTAACATAGA 58.495 37.037 0.00 0.00 0.00 1.98
732 770 9.531158 GGGAGTAACATAGGTAGTAACATAGAT 57.469 37.037 0.00 0.00 0.00 1.98
734 772 9.843334 GAGTAACATAGGTAGTAACATAGATGC 57.157 37.037 0.00 0.00 0.00 3.91
735 773 8.804204 AGTAACATAGGTAGTAACATAGATGCC 58.196 37.037 0.00 0.00 0.00 4.40
736 774 6.268825 ACATAGGTAGTAACATAGATGCCG 57.731 41.667 0.00 0.00 0.00 5.69
737 775 3.662247 AGGTAGTAACATAGATGCCGC 57.338 47.619 0.00 0.00 0.00 6.53
738 776 2.963101 AGGTAGTAACATAGATGCCGCA 59.037 45.455 0.00 0.00 0.00 5.69
739 777 3.578716 AGGTAGTAACATAGATGCCGCAT 59.421 43.478 5.28 5.28 0.00 4.73
740 778 4.770531 AGGTAGTAACATAGATGCCGCATA 59.229 41.667 5.67 0.00 0.00 3.14
741 779 5.245301 AGGTAGTAACATAGATGCCGCATAA 59.755 40.000 5.67 0.00 0.00 1.90
742 780 5.577164 GGTAGTAACATAGATGCCGCATAAG 59.423 44.000 5.67 0.00 0.00 1.73
743 781 3.997021 AGTAACATAGATGCCGCATAAGC 59.003 43.478 5.67 0.00 37.42 3.09
744 782 2.549064 ACATAGATGCCGCATAAGCA 57.451 45.000 5.67 0.00 45.94 3.91
745 783 2.849942 ACATAGATGCCGCATAAGCAA 58.150 42.857 5.67 0.00 44.83 3.91
746 784 3.213506 ACATAGATGCCGCATAAGCAAA 58.786 40.909 5.67 0.00 44.83 3.68
747 785 3.631686 ACATAGATGCCGCATAAGCAAAA 59.368 39.130 5.67 0.00 44.83 2.44
748 786 4.097741 ACATAGATGCCGCATAAGCAAAAA 59.902 37.500 5.67 0.00 44.83 1.94
749 787 3.806625 AGATGCCGCATAAGCAAAAAT 57.193 38.095 5.67 0.00 44.83 1.82
750 788 3.450578 AGATGCCGCATAAGCAAAAATG 58.549 40.909 5.67 0.00 44.83 2.32
751 789 3.130869 AGATGCCGCATAAGCAAAAATGA 59.869 39.130 5.67 0.00 44.83 2.57
752 790 3.523606 TGCCGCATAAGCAAAAATGAT 57.476 38.095 0.00 0.00 42.27 2.45
753 791 3.188492 TGCCGCATAAGCAAAAATGATG 58.812 40.909 0.00 0.00 42.27 3.07
754 792 3.119209 TGCCGCATAAGCAAAAATGATGA 60.119 39.130 0.00 0.00 42.27 2.92
755 793 4.053295 GCCGCATAAGCAAAAATGATGAT 58.947 39.130 0.00 0.00 42.27 2.45
756 794 4.084745 GCCGCATAAGCAAAAATGATGATG 60.085 41.667 0.00 0.00 42.27 3.07
757 795 5.045215 CCGCATAAGCAAAAATGATGATGT 58.955 37.500 0.00 0.00 42.27 3.06
758 796 5.051307 CCGCATAAGCAAAAATGATGATGTG 60.051 40.000 0.00 0.00 42.27 3.21
759 797 5.051307 CGCATAAGCAAAAATGATGATGTGG 60.051 40.000 0.00 0.00 42.27 4.17
760 798 5.277154 GCATAAGCAAAAATGATGATGTGGC 60.277 40.000 0.00 0.00 41.58 5.01
761 799 3.965379 AGCAAAAATGATGATGTGGCA 57.035 38.095 0.00 0.00 0.00 4.92
762 800 4.274602 AGCAAAAATGATGATGTGGCAA 57.725 36.364 0.00 0.00 0.00 4.52
763 801 4.250464 AGCAAAAATGATGATGTGGCAAG 58.750 39.130 0.00 0.00 0.00 4.01
764 802 3.998341 GCAAAAATGATGATGTGGCAAGT 59.002 39.130 0.00 0.00 0.00 3.16
765 803 5.047164 AGCAAAAATGATGATGTGGCAAGTA 60.047 36.000 0.00 0.00 0.00 2.24
766 804 5.290158 GCAAAAATGATGATGTGGCAAGTAG 59.710 40.000 0.00 0.00 0.00 2.57
767 805 6.392354 CAAAAATGATGATGTGGCAAGTAGT 58.608 36.000 0.00 0.00 0.00 2.73
768 806 6.594788 AAAATGATGATGTGGCAAGTAGTT 57.405 33.333 0.00 0.00 0.00 2.24
769 807 7.701539 AAAATGATGATGTGGCAAGTAGTTA 57.298 32.000 0.00 0.00 0.00 2.24
770 808 7.701539 AAATGATGATGTGGCAAGTAGTTAA 57.298 32.000 0.00 0.00 0.00 2.01
771 809 7.886629 AATGATGATGTGGCAAGTAGTTAAT 57.113 32.000 0.00 0.00 0.00 1.40
772 810 6.682423 TGATGATGTGGCAAGTAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
773 811 6.413892 TGATGATGTGGCAAGTAGTTAATGA 58.586 36.000 0.00 0.00 0.00 2.57
774 812 6.539826 TGATGATGTGGCAAGTAGTTAATGAG 59.460 38.462 0.00 0.00 0.00 2.90
775 813 5.185454 TGATGTGGCAAGTAGTTAATGAGG 58.815 41.667 0.00 0.00 0.00 3.86
776 814 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
777 815 4.832248 TGTGGCAAGTAGTTAATGAGGAG 58.168 43.478 0.00 0.00 0.00 3.69
778 816 4.530553 TGTGGCAAGTAGTTAATGAGGAGA 59.469 41.667 0.00 0.00 0.00 3.71
779 817 5.112686 GTGGCAAGTAGTTAATGAGGAGAG 58.887 45.833 0.00 0.00 0.00 3.20
780 818 5.023452 TGGCAAGTAGTTAATGAGGAGAGA 58.977 41.667 0.00 0.00 0.00 3.10
781 819 5.127845 TGGCAAGTAGTTAATGAGGAGAGAG 59.872 44.000 0.00 0.00 0.00 3.20
782 820 5.452636 GGCAAGTAGTTAATGAGGAGAGAGG 60.453 48.000 0.00 0.00 0.00 3.69
783 821 5.596845 CAAGTAGTTAATGAGGAGAGAGGC 58.403 45.833 0.00 0.00 0.00 4.70
784 822 4.873010 AGTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
785 823 5.273208 AGTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
786 824 5.721960 AGTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
787 825 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
788 826 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
789 827 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
790 828 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
791 829 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
792 830 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
793 831 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
794 832 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
795 833 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
796 834 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
797 835 5.362430 AGGAGAGAGGCAAATAGAGTAACAG 59.638 44.000 0.00 0.00 0.00 3.16
798 836 5.361285 GGAGAGAGGCAAATAGAGTAACAGA 59.639 44.000 0.00 0.00 0.00 3.41
799 837 6.127310 GGAGAGAGGCAAATAGAGTAACAGAA 60.127 42.308 0.00 0.00 0.00 3.02
800 838 7.418483 GGAGAGAGGCAAATAGAGTAACAGAAT 60.418 40.741 0.00 0.00 0.00 2.40
801 839 8.540507 AGAGAGGCAAATAGAGTAACAGAATA 57.459 34.615 0.00 0.00 0.00 1.75
802 840 9.153479 AGAGAGGCAAATAGAGTAACAGAATAT 57.847 33.333 0.00 0.00 0.00 1.28
803 841 9.202273 GAGAGGCAAATAGAGTAACAGAATATG 57.798 37.037 0.00 0.00 0.00 1.78
804 842 8.709308 AGAGGCAAATAGAGTAACAGAATATGT 58.291 33.333 0.00 0.00 46.97 2.29
818 856 7.969536 ACAGAATATGTTACCATCACATAGC 57.030 36.000 0.00 0.00 39.96 2.97
819 857 6.646653 ACAGAATATGTTACCATCACATAGCG 59.353 38.462 0.00 0.00 39.96 4.26
820 858 6.091305 CAGAATATGTTACCATCACATAGCGG 59.909 42.308 0.00 0.00 39.83 5.52
821 859 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
822 860 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
823 861 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
824 862 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
825 863 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
826 864 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
827 865 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
828 866 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
829 867 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
830 868 1.742831 TCACATAGCGGTTTCCAATGC 59.257 47.619 0.00 0.00 0.00 3.56
831 869 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
832 870 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
833 871 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
834 872 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
835 873 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
836 874 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
837 875 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
838 876 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
839 877 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
840 878 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
841 879 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
842 880 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
843 881 6.511767 CGGTTTCCAATGCATAATGAGTCTAC 60.512 42.308 0.00 0.00 0.00 2.59
844 882 6.318648 GGTTTCCAATGCATAATGAGTCTACA 59.681 38.462 0.00 0.00 0.00 2.74
845 883 7.148086 GGTTTCCAATGCATAATGAGTCTACAA 60.148 37.037 0.00 0.00 0.00 2.41
846 884 7.936496 TTCCAATGCATAATGAGTCTACAAA 57.064 32.000 0.00 0.00 0.00 2.83
847 885 7.558161 TCCAATGCATAATGAGTCTACAAAG 57.442 36.000 0.00 0.00 0.00 2.77
848 886 7.112122 TCCAATGCATAATGAGTCTACAAAGT 58.888 34.615 0.00 0.00 0.00 2.66
849 887 8.264347 TCCAATGCATAATGAGTCTACAAAGTA 58.736 33.333 0.00 0.00 0.00 2.24
850 888 8.892723 CCAATGCATAATGAGTCTACAAAGTAA 58.107 33.333 0.00 0.00 0.00 2.24
861 899 9.162764 TGAGTCTACAAAGTAATAAATGAAGGC 57.837 33.333 0.00 0.00 0.00 4.35
862 900 9.162764 GAGTCTACAAAGTAATAAATGAAGGCA 57.837 33.333 0.00 0.00 0.00 4.75
863 901 9.515226 AGTCTACAAAGTAATAAATGAAGGCAA 57.485 29.630 0.00 0.00 0.00 4.52
864 902 9.556030 GTCTACAAAGTAATAAATGAAGGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
879 917 3.067684 GGCAACTATGTTACCACACCT 57.932 47.619 0.00 0.00 35.03 4.00
880 918 4.210724 GGCAACTATGTTACCACACCTA 57.789 45.455 0.00 0.00 35.03 3.08
881 919 4.777463 GGCAACTATGTTACCACACCTAT 58.223 43.478 0.00 0.00 35.03 2.57
882 920 4.574828 GGCAACTATGTTACCACACCTATG 59.425 45.833 0.00 0.00 35.03 2.23
883 921 5.424757 GCAACTATGTTACCACACCTATGA 58.575 41.667 0.00 0.00 35.03 2.15
884 922 5.293569 GCAACTATGTTACCACACCTATGAC 59.706 44.000 0.00 0.00 35.03 3.06
885 923 6.403049 CAACTATGTTACCACACCTATGACA 58.597 40.000 0.00 0.00 35.03 3.58
886 924 5.974108 ACTATGTTACCACACCTATGACAC 58.026 41.667 0.00 0.00 35.03 3.67
887 925 5.720041 ACTATGTTACCACACCTATGACACT 59.280 40.000 0.00 0.00 35.03 3.55
888 926 6.893554 ACTATGTTACCACACCTATGACACTA 59.106 38.462 0.00 0.00 35.03 2.74
889 927 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
890 928 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
891 929 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
892 930 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
893 931 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
894 932 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
895 933 4.021229 CACACCTATGACACTACCCACTA 58.979 47.826 0.00 0.00 0.00 2.74
896 934 4.649674 CACACCTATGACACTACCCACTAT 59.350 45.833 0.00 0.00 0.00 2.12
897 935 4.649674 ACACCTATGACACTACCCACTATG 59.350 45.833 0.00 0.00 0.00 2.23
898 936 4.893524 CACCTATGACACTACCCACTATGA 59.106 45.833 0.00 0.00 0.00 2.15
899 937 5.362717 CACCTATGACACTACCCACTATGAA 59.637 44.000 0.00 0.00 0.00 2.57
900 938 6.042093 CACCTATGACACTACCCACTATGAAT 59.958 42.308 0.00 0.00 0.00 2.57
901 939 6.042093 ACCTATGACACTACCCACTATGAATG 59.958 42.308 0.00 0.00 0.00 2.67
902 940 5.957771 ATGACACTACCCACTATGAATGT 57.042 39.130 0.00 0.00 0.00 2.71
903 941 7.232737 CCTATGACACTACCCACTATGAATGTA 59.767 40.741 0.00 0.00 0.00 2.29
904 942 6.465439 TGACACTACCCACTATGAATGTAG 57.535 41.667 0.00 0.00 36.00 2.74
905 943 5.955959 TGACACTACCCACTATGAATGTAGT 59.044 40.000 0.00 0.00 41.96 2.73
906 944 7.120716 TGACACTACCCACTATGAATGTAGTA 58.879 38.462 0.00 0.00 39.92 1.82
907 945 7.616542 TGACACTACCCACTATGAATGTAGTAA 59.383 37.037 0.00 0.00 39.92 2.24
908 946 7.779073 ACACTACCCACTATGAATGTAGTAAC 58.221 38.462 0.00 0.00 39.92 2.50
909 947 7.398047 ACACTACCCACTATGAATGTAGTAACA 59.602 37.037 0.00 0.00 39.92 2.41
911 949 9.650714 ACTACCCACTATGAATGTAGTAACATA 57.349 33.333 0.00 0.00 45.79 2.29
913 951 8.777578 ACCCACTATGAATGTAGTAACATAGA 57.222 34.615 16.37 0.00 45.79 1.98
914 952 8.639761 ACCCACTATGAATGTAGTAACATAGAC 58.360 37.037 16.37 0.00 45.79 2.59
915 953 8.861086 CCCACTATGAATGTAGTAACATAGACT 58.139 37.037 16.37 0.00 45.79 3.24
954 992 9.401058 TGTATGTTACTAGTCTAAGTTACTCCC 57.599 37.037 0.00 0.00 31.82 4.30
955 993 7.894753 ATGTTACTAGTCTAAGTTACTCCCC 57.105 40.000 0.00 0.00 31.82 4.81
956 994 6.793478 TGTTACTAGTCTAAGTTACTCCCCA 58.207 40.000 0.00 0.00 31.82 4.96
957 995 6.660949 TGTTACTAGTCTAAGTTACTCCCCAC 59.339 42.308 0.00 0.00 31.82 4.61
958 996 5.533333 ACTAGTCTAAGTTACTCCCCACT 57.467 43.478 0.00 0.00 0.00 4.00
959 997 6.649041 ACTAGTCTAAGTTACTCCCCACTA 57.351 41.667 0.00 0.00 0.00 2.74
960 998 7.223472 ACTAGTCTAAGTTACTCCCCACTAT 57.777 40.000 0.00 0.00 0.00 2.12
961 999 7.061688 ACTAGTCTAAGTTACTCCCCACTATG 58.938 42.308 0.00 0.00 0.00 2.23
962 1000 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
963 1001 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
964 1002 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
965 1003 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
966 1004 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
967 1005 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
968 1006 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
969 1007 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
970 1008 0.639943 TCCCCACTATGACCAGCCTA 59.360 55.000 0.00 0.00 0.00 3.93
971 1009 1.009060 TCCCCACTATGACCAGCCTAA 59.991 52.381 0.00 0.00 0.00 2.69
972 1010 1.417890 CCCCACTATGACCAGCCTAAG 59.582 57.143 0.00 0.00 0.00 2.18
1027 1262 2.777832 AATCTTCCTTCTGCTTCGCT 57.222 45.000 0.00 0.00 0.00 4.93
1055 1290 5.183904 CCGTTTCCTGATTCTTTTCCAATCT 59.816 40.000 0.00 0.00 32.32 2.40
1071 1306 3.465403 CTGGTCTCCTGCCTCCCG 61.465 72.222 0.00 0.00 0.00 5.14
1090 1325 4.210304 CGCGTTCTTAGCCAGCGC 62.210 66.667 0.00 0.00 44.19 5.92
1091 1326 3.865830 GCGTTCTTAGCCAGCGCC 61.866 66.667 2.29 0.00 41.93 6.53
1092 1327 3.195698 CGTTCTTAGCCAGCGCCC 61.196 66.667 2.29 0.00 34.57 6.13
1093 1328 2.046314 GTTCTTAGCCAGCGCCCA 60.046 61.111 2.29 0.00 34.57 5.36
1094 1329 1.674322 GTTCTTAGCCAGCGCCCAA 60.674 57.895 2.29 0.00 34.57 4.12
1097 1332 4.323477 TTAGCCAGCGCCCAACGT 62.323 61.111 2.29 0.00 46.11 3.99
1279 1664 3.571828 TGCAGATTCTTATCTCGAGGAGG 59.428 47.826 13.56 1.73 39.11 4.30
1299 1685 2.281761 AGTTGGGCGTGCAAGAGG 60.282 61.111 2.99 0.00 0.00 3.69
1301 1687 4.269523 TTGGGCGTGCAAGAGGCT 62.270 61.111 2.99 0.00 45.15 4.58
1361 1761 5.701290 CAGGTACTTCCGATCTGTTCTTTTT 59.299 40.000 0.00 0.00 41.99 1.94
1362 1762 6.872020 CAGGTACTTCCGATCTGTTCTTTTTA 59.128 38.462 0.00 0.00 41.99 1.52
1363 1763 7.063544 CAGGTACTTCCGATCTGTTCTTTTTAG 59.936 40.741 0.00 0.00 41.99 1.85
1364 1764 7.039223 AGGTACTTCCGATCTGTTCTTTTTAGA 60.039 37.037 0.00 0.00 41.99 2.10
1451 1859 5.212194 GCTCGTGCTCTATTTTTGTTTTCA 58.788 37.500 1.41 0.00 36.03 2.69
1470 1878 3.347216 TCAAGCTTGAAGGAGTAATGGC 58.653 45.455 26.61 0.00 33.55 4.40
1483 1891 3.099141 AGTAATGGCCCAAGATTGTTGG 58.901 45.455 0.00 5.60 39.25 3.77
1508 1916 6.505272 AGGAATTCTTAGTCGATTTAGTCCG 58.495 40.000 5.23 0.00 0.00 4.79
1516 1924 3.062042 GTCGATTTAGTCCGGTTTGTGT 58.938 45.455 0.00 0.00 0.00 3.72
1519 1927 3.561503 GATTTAGTCCGGTTTGTGTTGC 58.438 45.455 0.00 0.00 0.00 4.17
1545 1953 5.568620 AATAGATTTCCGCTTAGGGATGT 57.431 39.130 0.00 0.00 41.52 3.06
1580 1989 4.197750 GTCTGAGCACTGGAATTGATCAT 58.802 43.478 0.00 0.00 38.63 2.45
1585 1994 5.009310 TGAGCACTGGAATTGATCATATTGC 59.991 40.000 0.00 5.79 34.53 3.56
1613 2024 5.841957 ACAGATCCCAATTTTGTAGATGC 57.158 39.130 0.00 0.00 0.00 3.91
1791 2240 1.179152 GGAAAACCAACCATACCCGG 58.821 55.000 0.00 0.00 0.00 5.73
1871 2498 1.761449 TGTGCTGCCTCTTTTGTTGA 58.239 45.000 0.00 0.00 0.00 3.18
1873 2500 2.694628 TGTGCTGCCTCTTTTGTTGAAT 59.305 40.909 0.00 0.00 0.00 2.57
1912 2539 1.915228 CAGAATCGGATGGGGTGGT 59.085 57.895 0.00 0.00 0.00 4.16
1946 2574 7.683322 AGGAAACTAACCCTAGAAATAGGAACT 59.317 37.037 2.81 0.00 41.24 3.01
1947 2575 8.327271 GGAAACTAACCCTAGAAATAGGAACTT 58.673 37.037 2.81 0.00 41.75 2.66
2008 3142 1.134759 GTGGTGCCATGCATGCATTAA 60.135 47.619 30.32 15.70 41.91 1.40
2068 3204 9.623687 GCGAAACATGAATTCAAAATATTTAGC 57.376 29.630 13.09 14.65 0.00 3.09
2144 3305 4.397417 CCATCCTGTTCAAGAAGGCTAAAG 59.603 45.833 0.00 0.00 33.25 1.85
2149 3310 3.498397 TGTTCAAGAAGGCTAAAGCTTCG 59.502 43.478 0.00 0.00 41.70 3.79
2192 3380 4.551702 AATTTGAATGTTAACCAGCCCC 57.448 40.909 2.48 0.00 0.00 5.80
2347 3535 9.910267 TTATTTGGGAAGGAAAATAGTACTACC 57.090 33.333 4.31 1.81 31.69 3.18
2348 3536 7.578458 TTTGGGAAGGAAAATAGTACTACCT 57.422 36.000 4.31 4.33 0.00 3.08
2349 3537 6.803366 TGGGAAGGAAAATAGTACTACCTC 57.197 41.667 4.31 2.22 0.00 3.85
2350 3538 5.664457 TGGGAAGGAAAATAGTACTACCTCC 59.336 44.000 4.31 11.05 0.00 4.30
2351 3539 5.221402 GGGAAGGAAAATAGTACTACCTCCG 60.221 48.000 4.31 0.00 0.00 4.63
2352 3540 5.362143 GGAAGGAAAATAGTACTACCTCCGT 59.638 44.000 4.31 9.41 0.00 4.69
2353 3541 6.460814 GGAAGGAAAATAGTACTACCTCCGTC 60.461 46.154 21.77 21.77 0.00 4.79
2354 3542 5.764432 AGGAAAATAGTACTACCTCCGTCT 58.236 41.667 4.31 0.00 0.00 4.18
2355 3543 6.193504 AGGAAAATAGTACTACCTCCGTCTT 58.806 40.000 4.31 0.00 0.00 3.01
2356 3544 6.096564 AGGAAAATAGTACTACCTCCGTCTTG 59.903 42.308 4.31 0.00 0.00 3.02
2357 3545 5.848833 AAATAGTACTACCTCCGTCTTGG 57.151 43.478 4.31 0.00 40.09 3.61
2358 3546 2.895242 AGTACTACCTCCGTCTTGGT 57.105 50.000 0.00 0.00 39.52 3.67
2359 3547 2.444421 AGTACTACCTCCGTCTTGGTG 58.556 52.381 0.00 0.00 39.52 4.17
2360 3548 2.040813 AGTACTACCTCCGTCTTGGTGA 59.959 50.000 0.00 0.00 39.52 4.02
2361 3549 2.005370 ACTACCTCCGTCTTGGTGAA 57.995 50.000 0.00 0.00 39.52 3.18
2362 3550 2.537143 ACTACCTCCGTCTTGGTGAAT 58.463 47.619 0.00 0.00 39.52 2.57
2363 3551 2.904434 ACTACCTCCGTCTTGGTGAATT 59.096 45.455 0.00 0.00 39.52 2.17
2364 3552 4.091549 ACTACCTCCGTCTTGGTGAATTA 58.908 43.478 0.00 0.00 39.52 1.40
2365 3553 3.611766 ACCTCCGTCTTGGTGAATTAG 57.388 47.619 0.00 0.00 39.52 1.73
2366 3554 3.170717 ACCTCCGTCTTGGTGAATTAGA 58.829 45.455 0.00 0.00 39.52 2.10
2367 3555 3.056035 ACCTCCGTCTTGGTGAATTAGAC 60.056 47.826 0.00 0.00 39.52 2.59
2368 3556 3.056107 CCTCCGTCTTGGTGAATTAGACA 60.056 47.826 6.22 0.00 38.52 3.41
2369 3557 4.383118 CCTCCGTCTTGGTGAATTAGACAT 60.383 45.833 6.22 0.00 38.52 3.06
2370 3558 5.163447 CCTCCGTCTTGGTGAATTAGACATA 60.163 44.000 6.22 0.00 38.52 2.29
2371 3559 5.657474 TCCGTCTTGGTGAATTAGACATAC 58.343 41.667 6.22 0.00 38.52 2.39
2372 3560 5.421056 TCCGTCTTGGTGAATTAGACATACT 59.579 40.000 6.22 0.00 38.52 2.12
2373 3561 6.070995 TCCGTCTTGGTGAATTAGACATACTT 60.071 38.462 6.22 0.00 38.52 2.24
2374 3562 6.594159 CCGTCTTGGTGAATTAGACATACTTT 59.406 38.462 6.22 0.00 38.52 2.66
2375 3563 7.762615 CCGTCTTGGTGAATTAGACATACTTTA 59.237 37.037 6.22 0.00 38.52 1.85
2376 3564 8.808529 CGTCTTGGTGAATTAGACATACTTTAG 58.191 37.037 6.22 0.00 38.52 1.85
2377 3565 9.871238 GTCTTGGTGAATTAGACATACTTTAGA 57.129 33.333 0.00 0.00 38.49 2.10
2379 3567 9.877178 CTTGGTGAATTAGACATACTTTAGAGT 57.123 33.333 0.00 0.00 39.97 3.24
2380 3568 9.653287 TTGGTGAATTAGACATACTTTAGAGTG 57.347 33.333 0.00 0.00 36.60 3.51
2381 3569 8.812972 TGGTGAATTAGACATACTTTAGAGTGT 58.187 33.333 0.00 0.00 36.60 3.55
2382 3570 9.088512 GGTGAATTAGACATACTTTAGAGTGTG 57.911 37.037 8.39 8.39 46.78 3.82
2383 3571 9.856488 GTGAATTAGACATACTTTAGAGTGTGA 57.144 33.333 15.71 0.00 44.94 3.58
2386 3574 8.879342 ATTAGACATACTTTAGAGTGTGATGC 57.121 34.615 15.71 5.95 44.94 3.91
2387 3575 6.286240 AGACATACTTTAGAGTGTGATGCA 57.714 37.500 15.71 0.00 44.94 3.96
2388 3576 6.102663 AGACATACTTTAGAGTGTGATGCAC 58.897 40.000 15.71 0.00 44.94 4.57
2398 3586 3.293311 GTGTGATGCACTCATTTTGCT 57.707 42.857 0.00 0.00 44.41 3.91
2399 3587 3.645884 GTGTGATGCACTCATTTTGCTT 58.354 40.909 0.00 0.00 44.41 3.91
2400 3588 3.671928 GTGTGATGCACTCATTTTGCTTC 59.328 43.478 0.00 3.87 44.41 3.86
2401 3589 2.912967 GTGATGCACTCATTTTGCTTCG 59.087 45.455 0.00 0.00 43.62 3.79
2402 3590 2.553602 TGATGCACTCATTTTGCTTCGT 59.446 40.909 0.00 0.00 43.62 3.85
2403 3591 3.750652 TGATGCACTCATTTTGCTTCGTA 59.249 39.130 0.00 0.00 43.62 3.43
2404 3592 4.395854 TGATGCACTCATTTTGCTTCGTAT 59.604 37.500 0.00 0.00 43.62 3.06
2405 3593 4.082274 TGCACTCATTTTGCTTCGTATG 57.918 40.909 0.00 0.00 40.86 2.39
2406 3594 3.501828 TGCACTCATTTTGCTTCGTATGT 59.498 39.130 0.00 0.00 40.86 2.29
2407 3595 4.693095 TGCACTCATTTTGCTTCGTATGTA 59.307 37.500 0.00 0.00 40.86 2.29
2408 3596 5.163864 TGCACTCATTTTGCTTCGTATGTAG 60.164 40.000 0.00 0.00 40.86 2.74
2409 3597 5.163854 GCACTCATTTTGCTTCGTATGTAGT 60.164 40.000 0.00 0.00 37.00 2.73
2410 3598 6.470160 CACTCATTTTGCTTCGTATGTAGTC 58.530 40.000 0.00 0.00 0.00 2.59
2411 3599 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
2412 3600 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
2413 3601 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
2414 3602 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
2415 3603 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
2416 3604 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
2417 3605 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
2418 3606 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
2419 3607 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
2420 3608 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
2421 3609 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
2422 3610 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
2423 3611 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
2424 3612 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
2425 3613 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
2426 3614 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2427 3615 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2428 3616 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2429 3617 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2430 3618 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2431 3619 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2432 3620 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2433 3621 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2434 3622 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2435 3623 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2436 3624 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2437 3625 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2453 3641 8.947115 AGAAAGACAAATATTTAGGAACGAAGG 58.053 33.333 0.00 0.00 0.00 3.46
2454 3642 7.625828 AAGACAAATATTTAGGAACGAAGGG 57.374 36.000 0.00 0.00 0.00 3.95
2455 3643 6.954232 AGACAAATATTTAGGAACGAAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
2456 3644 7.048512 AGACAAATATTTAGGAACGAAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
2457 3645 6.718294 ACAAATATTTAGGAACGAAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
2458 3646 7.854337 ACAAATATTTAGGAACGAAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
2459 3647 8.491958 ACAAATATTTAGGAACGAAGGGAGTAT 58.508 33.333 0.00 0.00 0.00 2.12
2460 3648 8.774586 CAAATATTTAGGAACGAAGGGAGTATG 58.225 37.037 0.00 0.00 0.00 2.39
2461 3649 5.952347 ATTTAGGAACGAAGGGAGTATGT 57.048 39.130 0.00 0.00 0.00 2.29
2462 3650 4.730949 TTAGGAACGAAGGGAGTATGTG 57.269 45.455 0.00 0.00 0.00 3.21
2463 3651 2.816411 AGGAACGAAGGGAGTATGTGA 58.184 47.619 0.00 0.00 0.00 3.58
2464 3652 2.496470 AGGAACGAAGGGAGTATGTGAC 59.504 50.000 0.00 0.00 0.00 3.67
2465 3653 2.232941 GGAACGAAGGGAGTATGTGACA 59.767 50.000 0.00 0.00 0.00 3.58
2466 3654 3.306502 GGAACGAAGGGAGTATGTGACAA 60.307 47.826 0.00 0.00 0.00 3.18
2467 3655 3.594603 ACGAAGGGAGTATGTGACAAG 57.405 47.619 0.00 0.00 0.00 3.16
2468 3656 3.162666 ACGAAGGGAGTATGTGACAAGA 58.837 45.455 0.00 0.00 0.00 3.02
2469 3657 3.576982 ACGAAGGGAGTATGTGACAAGAA 59.423 43.478 0.00 0.00 0.00 2.52
2470 3658 4.039973 ACGAAGGGAGTATGTGACAAGAAA 59.960 41.667 0.00 0.00 0.00 2.52
2471 3659 5.178797 CGAAGGGAGTATGTGACAAGAAAT 58.821 41.667 0.00 0.00 0.00 2.17
2472 3660 6.070995 ACGAAGGGAGTATGTGACAAGAAATA 60.071 38.462 0.00 0.00 0.00 1.40
2473 3661 6.986817 CGAAGGGAGTATGTGACAAGAAATAT 59.013 38.462 0.00 0.00 0.00 1.28
2474 3662 8.141909 CGAAGGGAGTATGTGACAAGAAATATA 58.858 37.037 0.00 0.00 0.00 0.86
2508 3696 4.451629 ACACCCGTGTAGAAATCTAGTG 57.548 45.455 0.00 5.65 42.90 2.74
2509 3697 4.084287 ACACCCGTGTAGAAATCTAGTGA 58.916 43.478 11.50 0.00 42.90 3.41
2510 3698 4.710375 ACACCCGTGTAGAAATCTAGTGAT 59.290 41.667 11.50 0.00 42.90 3.06
2511 3699 5.889853 ACACCCGTGTAGAAATCTAGTGATA 59.110 40.000 11.50 0.00 42.90 2.15
2512 3700 6.550108 ACACCCGTGTAGAAATCTAGTGATAT 59.450 38.462 11.50 0.00 42.90 1.63
2513 3701 7.722728 ACACCCGTGTAGAAATCTAGTGATATA 59.277 37.037 11.50 0.00 42.90 0.86
2514 3702 8.021973 CACCCGTGTAGAAATCTAGTGATATAC 58.978 40.741 0.00 0.00 31.70 1.47
2515 3703 7.943447 ACCCGTGTAGAAATCTAGTGATATACT 59.057 37.037 0.00 0.00 43.56 2.12
2516 3704 8.794553 CCCGTGTAGAAATCTAGTGATATACTT 58.205 37.037 0.00 0.00 40.89 2.24
2554 3742 7.837202 ACACGTATTTAATTCCTCAAATCGA 57.163 32.000 0.00 0.00 0.00 3.59
2555 3743 8.433421 ACACGTATTTAATTCCTCAAATCGAT 57.567 30.769 0.00 0.00 0.00 3.59
2556 3744 9.537192 ACACGTATTTAATTCCTCAAATCGATA 57.463 29.630 0.00 0.00 0.00 2.92
2557 3745 9.793245 CACGTATTTAATTCCTCAAATCGATAC 57.207 33.333 0.00 0.00 0.00 2.24
2558 3746 9.537192 ACGTATTTAATTCCTCAAATCGATACA 57.463 29.630 0.00 0.00 0.00 2.29
2559 3747 9.793245 CGTATTTAATTCCTCAAATCGATACAC 57.207 33.333 0.00 0.00 0.00 2.90
2560 3748 9.793245 GTATTTAATTCCTCAAATCGATACACG 57.207 33.333 0.00 0.00 44.09 4.49
2575 3763 6.199043 CGATACACGAATGACTTATTCACC 57.801 41.667 0.00 0.00 44.42 4.02
2576 3764 5.977725 CGATACACGAATGACTTATTCACCT 59.022 40.000 0.00 0.00 44.42 4.00
2577 3765 7.136772 CGATACACGAATGACTTATTCACCTA 58.863 38.462 0.00 0.00 44.42 3.08
2578 3766 7.323895 CGATACACGAATGACTTATTCACCTAG 59.676 40.741 0.00 0.00 44.42 3.02
2579 3767 6.525578 ACACGAATGACTTATTCACCTAGA 57.474 37.500 0.00 0.00 44.42 2.43
2580 3768 6.331061 ACACGAATGACTTATTCACCTAGAC 58.669 40.000 0.00 0.00 44.42 2.59
2581 3769 5.455849 CACGAATGACTTATTCACCTAGACG 59.544 44.000 0.00 0.00 44.42 4.18
2582 3770 4.976731 CGAATGACTTATTCACCTAGACGG 59.023 45.833 0.00 0.00 44.42 4.79
2583 3771 5.220989 CGAATGACTTATTCACCTAGACGGA 60.221 44.000 0.00 0.00 44.42 4.69
2584 3772 5.776173 ATGACTTATTCACCTAGACGGAG 57.224 43.478 0.00 0.00 36.92 4.63
2585 3773 3.952323 TGACTTATTCACCTAGACGGAGG 59.048 47.826 0.00 0.00 42.89 4.30
2660 3856 3.625649 AGGTTTGAGCAAAGCCAAAAA 57.374 38.095 18.30 0.00 46.62 1.94
2685 3881 8.978874 AAATGAAATGAAAAAGGCCTAAAACT 57.021 26.923 5.16 0.00 0.00 2.66
2701 3897 7.275920 GCCTAAAACTATCTCTTCTTGATCCA 58.724 38.462 0.00 0.00 0.00 3.41
2720 3916 8.213518 TGATCCATTGTCTAAATTTAGCTCAC 57.786 34.615 18.68 12.88 0.00 3.51
2773 3969 8.772705 GTTTGATCACCATGCTTGAAAATTTTA 58.227 29.630 2.75 0.00 0.00 1.52
2813 4009 4.660789 ATAGCCCAAGCAGCTAAAATTG 57.339 40.909 0.00 0.00 45.46 2.32
2860 4056 5.712217 TCAGTTCGTCCTTTATATTTGCG 57.288 39.130 0.00 0.00 0.00 4.85
2931 4165 7.541162 TGTATTGAGAGCAATTCTTCCAAATG 58.459 34.615 0.00 0.00 41.87 2.32
3289 5080 4.516698 CACTTGTGGAACTGATTTGCTAGT 59.483 41.667 0.00 0.00 38.04 2.57
3299 5093 2.378547 TGATTTGCTAGTTTGGAGGGGT 59.621 45.455 0.00 0.00 0.00 4.95
3342 5137 0.329261 CCTTCCCAGCCATGAGAACA 59.671 55.000 0.00 0.00 0.00 3.18
3350 5145 4.758674 CCCAGCCATGAGAACATTACATAG 59.241 45.833 0.00 0.00 34.15 2.23
3363 5158 8.893727 AGAACATTACATAGATTGGTAGCAAAC 58.106 33.333 12.00 9.21 0.00 2.93
3367 5162 8.677300 CATTACATAGATTGGTAGCAAACAACT 58.323 33.333 12.00 10.85 0.00 3.16
3435 5330 7.863901 ATTTAATCTCTAGCATGAGTAGGGT 57.136 36.000 0.00 0.00 35.68 4.34
3704 5753 8.313292 AGACATTAGATAGATCATTCCTCAAGC 58.687 37.037 0.00 0.00 0.00 4.01
3710 5759 1.063174 GATCATTCCTCAAGCGTGTGC 59.937 52.381 0.00 0.00 43.24 4.57
3779 5828 2.700722 TGTGTGCACCTAAGACAACA 57.299 45.000 15.69 6.32 0.00 3.33
3784 5833 3.138304 GTGCACCTAAGACAACACATGA 58.862 45.455 5.22 0.00 0.00 3.07
3942 5993 4.704540 TGTTGATGTGACAAAACTTGGTCT 59.295 37.500 13.40 0.00 35.11 3.85
4389 6502 2.096218 GCAGTGTCTCGACAAAATGTCC 60.096 50.000 0.64 0.00 44.20 4.02
4520 6645 1.134753 CCATCTTGCGCAATGCCTAAA 59.865 47.619 25.26 0.00 45.60 1.85
4604 6729 5.791303 ATAATGGTAATACCTTAGGGCCC 57.209 43.478 16.46 16.46 39.58 5.80
4704 6841 9.454859 CAAAGAATAAATCCTCTTACTCAAGGT 57.545 33.333 0.00 0.00 34.12 3.50
4710 6847 3.583228 TCCTCTTACTCAAGGTCCAACA 58.417 45.455 0.00 0.00 34.12 3.33
4718 6855 5.762179 ACTCAAGGTCCAACAATGAGATA 57.238 39.130 14.45 0.00 39.85 1.98
4833 6970 6.759272 TCTTCAACTAGGGATCAATATTCCG 58.241 40.000 0.00 0.00 35.63 4.30
4841 6978 4.102524 AGGGATCAATATTCCGCAGTGTTA 59.897 41.667 0.00 0.00 35.63 2.41
4903 7040 1.120530 TACCCCTCTTCGATGCTTCC 58.879 55.000 0.00 0.00 0.00 3.46
4963 7100 6.410942 AGCTTCAAATTCCAACTTAGCTTT 57.589 33.333 0.00 0.00 34.29 3.51
4964 7101 6.218746 AGCTTCAAATTCCAACTTAGCTTTG 58.781 36.000 0.00 0.00 34.29 2.77
4965 7102 6.040842 AGCTTCAAATTCCAACTTAGCTTTGA 59.959 34.615 0.00 0.00 34.29 2.69
4977 7114 7.308435 CAACTTAGCTTTGATGAAGGGTAAAG 58.692 38.462 0.00 0.00 35.82 1.85
5044 7184 7.616542 TGTTTCTTTACCTGGTAAGAACCTTTT 59.383 33.333 24.15 0.00 46.91 2.27
5064 7204 1.282930 GAGTCACCAAACGGTCGAGC 61.283 60.000 4.06 4.06 33.11 5.03
5082 7222 1.880894 CCATCATGCATGGCCGATC 59.119 57.895 25.97 0.00 46.18 3.69
5133 7273 3.406764 AGAAAGTGCAAGACTAGCCTTG 58.593 45.455 13.95 13.95 44.67 3.61
5224 7364 0.037975 GAGAAACGTGGGGTCGCTAA 60.038 55.000 0.00 0.00 0.00 3.09
5403 7555 6.552350 TGATGATGGTGATCAGAATCTCACTA 59.448 38.462 15.26 0.00 42.01 2.74
5434 7586 0.524862 GGTGCTGCTGGATTGACAAG 59.475 55.000 0.00 0.00 0.00 3.16
5492 7644 3.606687 TGGTTTAGAATCTTCGAAGCCC 58.393 45.455 20.56 11.09 40.59 5.19
5723 7901 0.969149 TGTCACGATCACTTGAGGCT 59.031 50.000 0.00 0.00 0.00 4.58
5891 8074 1.339610 TCTTTTGCACCCGTTGGATTG 59.660 47.619 0.00 0.00 34.81 2.67
5974 8158 5.012871 AGTCATGGAGAATGATATGGTCCTG 59.987 44.000 0.00 0.00 46.90 3.86
6191 8391 3.261981 ACCACTATGTAAGCCTTTCCG 57.738 47.619 0.00 0.00 0.00 4.30
6291 8495 1.631898 ACCTGTGGGCGGTATTTAAGT 59.368 47.619 0.00 0.00 35.63 2.24
6299 8518 3.427098 GGGCGGTATTTAAGTGCAGAAAC 60.427 47.826 0.00 0.00 0.00 2.78
6419 8638 3.378427 GGTTAAACATGGATGCTGGACTC 59.622 47.826 0.00 0.00 0.00 3.36
6519 8738 0.773644 AGCTTCACCCAACACTCCAT 59.226 50.000 0.00 0.00 0.00 3.41
6555 8777 2.816958 CTACCGCAGCTGCCACAG 60.817 66.667 32.07 21.08 37.91 3.66
6571 8793 0.392461 ACAGTGTCTGCAAACCACGT 60.392 50.000 0.00 0.00 34.37 4.49
6638 8860 0.179234 TTGTGGTTCAGCGAACTCCA 59.821 50.000 16.93 12.28 41.70 3.86
6800 9030 4.100808 AGCTCATCTGGATGTTTAGTCCTC 59.899 45.833 9.94 0.00 39.72 3.71
6947 9186 1.444895 GTTACGATCACACGGGCGT 60.445 57.895 0.00 0.00 40.42 5.68
6967 9206 0.318762 GAGGCCGATCATAGGGTGTC 59.681 60.000 0.00 0.00 0.00 3.67
6985 9224 2.559231 TGTCACTGAGGCGTGTACATAA 59.441 45.455 0.00 0.00 36.33 1.90
7003 9242 4.097286 ACATAAACAACGGAGCAAACACTT 59.903 37.500 0.00 0.00 0.00 3.16
7204 9443 4.142403 ACAGTGCCCGTTGAATCAAATATG 60.142 41.667 0.00 0.00 0.00 1.78
7207 9446 5.360714 AGTGCCCGTTGAATCAAATATGAAT 59.639 36.000 0.00 0.00 39.49 2.57
7292 9545 6.915843 CGTGCATGTACATGATAACTACAGTA 59.084 38.462 34.65 4.76 41.20 2.74
7293 9546 7.113544 CGTGCATGTACATGATAACTACAGTAG 59.886 40.741 34.65 13.68 41.20 2.57
7294 9547 7.921214 GTGCATGTACATGATAACTACAGTAGT 59.079 37.037 34.65 7.48 41.20 2.73
7364 9617 9.974980 AACTTGTTTGAAGAAAAAGAAACACTA 57.025 25.926 0.00 0.00 37.88 2.74
7412 9679 5.837437 AGTGTCCAATCTTATAGAAGCGAG 58.163 41.667 0.00 0.00 32.21 5.03
7436 9703 0.241481 GTCATCGACCGGGAGATAGC 59.759 60.000 6.32 2.85 0.00 2.97
7437 9704 0.179001 TCATCGACCGGGAGATAGCA 60.179 55.000 6.32 0.00 0.00 3.49
7438 9705 0.039074 CATCGACCGGGAGATAGCAC 60.039 60.000 6.32 0.00 0.00 4.40
7439 9706 1.516365 ATCGACCGGGAGATAGCACG 61.516 60.000 6.32 0.00 0.00 5.34
7473 9743 2.254459 CACTCTCTCGCACACACATAC 58.746 52.381 0.00 0.00 0.00 2.39
7511 9781 2.158769 TGGGCATCTCCATCATACACAC 60.159 50.000 0.00 0.00 36.21 3.82
7512 9782 2.158769 GGGCATCTCCATCATACACACA 60.159 50.000 0.00 0.00 36.21 3.72
7529 9799 5.869579 ACACACACACTCCATCTATTTCTT 58.130 37.500 0.00 0.00 0.00 2.52
7547 9817 5.860648 TTCTTTCCCTCCTTCAAGGTTAT 57.139 39.130 2.50 0.00 36.53 1.89
7587 9862 6.090088 CCTCGTAAGTCTCTCTCACAAAAATG 59.910 42.308 0.00 0.00 39.48 2.32
7610 9885 3.065371 CACACCCTCTCTTTGTTGAACAC 59.935 47.826 0.00 0.00 0.00 3.32
7616 9891 1.608590 CTCTTTGTTGAACACGCCCAT 59.391 47.619 0.00 0.00 0.00 4.00
7647 9922 4.742201 CTCACCCACCGCCACTCG 62.742 72.222 0.00 0.00 38.08 4.18
7656 9931 1.006102 CCGCCACTCGTGTCTTTCT 60.006 57.895 0.00 0.00 36.19 2.52
7710 10030 3.929948 CGAATCTTCGGGCAGCGC 61.930 66.667 0.00 0.00 46.30 5.92
7712 10032 2.359850 AATCTTCGGGCAGCGCAA 60.360 55.556 11.47 2.59 0.00 4.85
7723 10043 1.951510 CAGCGCAAACACTCATGGT 59.048 52.632 11.47 0.00 0.00 3.55
7739 10059 3.265221 TCATGGTGCATCCTTTCTCTCTT 59.735 43.478 0.00 0.00 37.07 2.85
7743 10063 4.074970 GGTGCATCCTTTCTCTCTTTTCA 58.925 43.478 0.00 0.00 0.00 2.69
7744 10064 4.520492 GGTGCATCCTTTCTCTCTTTTCAA 59.480 41.667 0.00 0.00 0.00 2.69
7745 10065 5.010012 GGTGCATCCTTTCTCTCTTTTCAAA 59.990 40.000 0.00 0.00 0.00 2.69
7777 10097 7.114953 CGTCGAGCATACATCTTACAATACAAT 59.885 37.037 0.00 0.00 0.00 2.71
7783 10103 8.446273 GCATACATCTTACAATACAATGCTAGG 58.554 37.037 0.00 0.00 35.49 3.02
7800 10120 2.295253 AGGACGACTTTAAGCATCGG 57.705 50.000 9.23 0.00 40.16 4.18
7884 10204 1.369091 CCTCGGCAAAACATCCTCGG 61.369 60.000 0.00 0.00 0.00 4.63
7891 10211 3.486875 GGCAAAACATCCTCGGTATTTCG 60.487 47.826 0.00 0.00 0.00 3.46
7907 10227 7.386573 TCGGTATTTCGTGTATATGCATCAATT 59.613 33.333 0.19 0.00 0.00 2.32
7924 10244 6.292488 GCATCAATTTTGACTTGTGTCTTTGG 60.292 38.462 0.00 0.00 43.29 3.28
7932 10252 5.680619 TGACTTGTGTCTTTGGTCAATAGT 58.319 37.500 0.00 0.00 43.29 2.12
7941 10261 0.035820 TGGTCAATAGTCGGGTTGCC 60.036 55.000 0.00 0.00 0.00 4.52
7980 10300 2.288458 CCTTACGTTTCCGCTTTGTTCA 59.712 45.455 0.00 0.00 37.70 3.18
7981 10301 3.541711 CTTACGTTTCCGCTTTGTTCAG 58.458 45.455 0.00 0.00 37.70 3.02
7986 10306 3.555518 GTTTCCGCTTTGTTCAGCTAAG 58.444 45.455 0.00 0.00 37.68 2.18
8003 10323 3.809324 GCTAAGGGTGTAAAGGAAGCACA 60.809 47.826 0.00 0.00 35.05 4.57
8019 10376 4.708726 AGCACAATTGTATGGAGAAAGC 57.291 40.909 11.53 7.19 0.00 3.51
8025 10382 5.242838 ACAATTGTATGGAGAAAGCCGAAAA 59.757 36.000 9.97 0.00 0.00 2.29
8031 10388 3.218453 TGGAGAAAGCCGAAAATTGACA 58.782 40.909 0.00 0.00 0.00 3.58
8062 10419 2.096614 CGCGTAAATTGGTCGTCAAACT 60.097 45.455 0.00 0.00 39.05 2.66
8066 10423 5.390145 GCGTAAATTGGTCGTCAAACTGTAT 60.390 40.000 0.00 0.00 39.05 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 46 9.099071 TCCTTCAAATCCCTCATATTTTTGAAA 57.901 29.630 9.55 0.00 42.44 2.69
136 146 2.498941 GCGGATCGAGATGACCCCA 61.499 63.158 0.00 0.00 0.00 4.96
173 183 2.324541 CTCTTCCCCTCGGATCTTCAT 58.675 52.381 0.00 0.00 38.24 2.57
217 227 2.420466 TTTCCCAAACTCGCCCCTCC 62.420 60.000 0.00 0.00 0.00 4.30
276 312 4.143179 GGTCAGTTATTTCAACCGAGAACG 60.143 45.833 0.00 0.00 39.43 3.95
360 398 1.608336 CCTCCGTCACACCCTACCA 60.608 63.158 0.00 0.00 0.00 3.25
420 458 1.974875 TCAGAGACGCTGGCGGTAA 60.975 57.895 18.99 0.00 44.98 2.85
450 488 3.384532 TCCTGGCGGTCGGGTTAC 61.385 66.667 7.45 0.00 42.62 2.50
510 548 0.184211 TCACGATCAGATCCCGGGTA 59.816 55.000 22.86 7.86 0.00 3.69
512 550 0.681733 ATTCACGATCAGATCCCGGG 59.318 55.000 16.85 16.85 0.00 5.73
521 559 8.629158 CCCTTTTTCCATATAAATTCACGATCA 58.371 33.333 0.00 0.00 0.00 2.92
549 587 3.487942 GTGCGGCTTAATTTCGTGTTTTT 59.512 39.130 0.00 0.00 0.00 1.94
652 690 8.661257 CGATATGTTTCCAATTATATTACGGCA 58.339 33.333 0.00 0.00 0.00 5.69
685 723 2.771943 CACTATGACCAGCCTTAGGGAA 59.228 50.000 0.00 0.00 33.58 3.97
686 724 2.398588 CACTATGACCAGCCTTAGGGA 58.601 52.381 0.00 0.00 33.58 4.20
687 725 1.417890 CCACTATGACCAGCCTTAGGG 59.582 57.143 0.00 0.00 0.00 3.53
688 726 1.417890 CCCACTATGACCAGCCTTAGG 59.582 57.143 0.00 0.00 0.00 2.69
689 727 2.366916 CTCCCACTATGACCAGCCTTAG 59.633 54.545 0.00 0.00 0.00 2.18
690 728 2.292918 ACTCCCACTATGACCAGCCTTA 60.293 50.000 0.00 0.00 0.00 2.69
691 729 1.207791 CTCCCACTATGACCAGCCTT 58.792 55.000 0.00 0.00 0.00 4.35
692 730 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
693 731 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
694 732 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
695 733 5.011125 CCTATGTTACTCCCACTATGACCAG 59.989 48.000 0.00 0.00 0.00 4.00
696 734 4.899457 CCTATGTTACTCCCACTATGACCA 59.101 45.833 0.00 0.00 0.00 4.02
697 735 4.900054 ACCTATGTTACTCCCACTATGACC 59.100 45.833 0.00 0.00 0.00 4.02
698 736 6.776603 ACTACCTATGTTACTCCCACTATGAC 59.223 42.308 0.00 0.00 0.00 3.06
699 737 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
700 738 8.574737 GTTACTACCTATGTTACTCCCACTATG 58.425 40.741 0.00 0.00 0.00 2.23
701 739 8.284435 TGTTACTACCTATGTTACTCCCACTAT 58.716 37.037 0.00 0.00 0.00 2.12
702 740 7.642186 TGTTACTACCTATGTTACTCCCACTA 58.358 38.462 0.00 0.00 0.00 2.74
703 741 6.496743 TGTTACTACCTATGTTACTCCCACT 58.503 40.000 0.00 0.00 0.00 4.00
704 742 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
705 743 8.505246 TCTATGTTACTACCTATGTTACTCCCA 58.495 37.037 0.00 0.00 0.00 4.37
706 744 8.930846 TCTATGTTACTACCTATGTTACTCCC 57.069 38.462 0.00 0.00 0.00 4.30
708 746 9.843334 GCATCTATGTTACTACCTATGTTACTC 57.157 37.037 0.00 0.00 0.00 2.59
709 747 8.804204 GGCATCTATGTTACTACCTATGTTACT 58.196 37.037 0.00 0.00 0.00 2.24
710 748 7.754027 CGGCATCTATGTTACTACCTATGTTAC 59.246 40.741 0.00 0.00 0.00 2.50
711 749 7.576287 GCGGCATCTATGTTACTACCTATGTTA 60.576 40.741 0.00 0.00 0.00 2.41
712 750 6.688578 CGGCATCTATGTTACTACCTATGTT 58.311 40.000 0.00 0.00 0.00 2.71
713 751 5.336531 GCGGCATCTATGTTACTACCTATGT 60.337 44.000 0.00 0.00 0.00 2.29
714 752 5.103000 GCGGCATCTATGTTACTACCTATG 58.897 45.833 0.00 0.00 0.00 2.23
715 753 4.770531 TGCGGCATCTATGTTACTACCTAT 59.229 41.667 0.00 0.00 0.00 2.57
716 754 4.146564 TGCGGCATCTATGTTACTACCTA 58.853 43.478 0.00 0.00 0.00 3.08
717 755 2.963101 TGCGGCATCTATGTTACTACCT 59.037 45.455 0.00 0.00 0.00 3.08
718 756 3.380479 TGCGGCATCTATGTTACTACC 57.620 47.619 0.00 0.00 0.00 3.18
719 757 5.062308 GCTTATGCGGCATCTATGTTACTAC 59.938 44.000 20.34 0.00 0.00 2.73
720 758 5.168569 GCTTATGCGGCATCTATGTTACTA 58.831 41.667 20.34 0.00 0.00 1.82
721 759 3.997021 GCTTATGCGGCATCTATGTTACT 59.003 43.478 20.34 0.00 0.00 2.24
722 760 3.745975 TGCTTATGCGGCATCTATGTTAC 59.254 43.478 20.34 2.61 43.34 2.50
723 761 4.001618 TGCTTATGCGGCATCTATGTTA 57.998 40.909 20.34 0.00 43.34 2.41
724 762 2.849942 TGCTTATGCGGCATCTATGTT 58.150 42.857 20.34 0.00 43.34 2.71
725 763 2.549064 TGCTTATGCGGCATCTATGT 57.451 45.000 20.34 0.00 43.34 2.29
726 764 3.902261 TTTGCTTATGCGGCATCTATG 57.098 42.857 20.34 6.51 43.34 2.23
727 765 4.916983 TTTTTGCTTATGCGGCATCTAT 57.083 36.364 20.34 0.00 43.34 1.98
728 766 4.337836 TCATTTTTGCTTATGCGGCATCTA 59.662 37.500 20.34 8.09 43.34 1.98
729 767 3.130869 TCATTTTTGCTTATGCGGCATCT 59.869 39.130 20.34 0.00 43.34 2.90
730 768 3.446799 TCATTTTTGCTTATGCGGCATC 58.553 40.909 20.34 5.95 43.34 3.91
731 769 3.523606 TCATTTTTGCTTATGCGGCAT 57.476 38.095 20.57 20.57 43.34 4.40
732 770 3.119209 TCATCATTTTTGCTTATGCGGCA 60.119 39.130 4.58 4.58 43.34 5.69
733 771 3.446799 TCATCATTTTTGCTTATGCGGC 58.553 40.909 0.00 0.00 43.34 6.53
734 772 5.045215 ACATCATCATTTTTGCTTATGCGG 58.955 37.500 0.00 0.00 43.34 5.69
735 773 5.051307 CCACATCATCATTTTTGCTTATGCG 60.051 40.000 0.00 0.00 43.34 4.73
736 774 5.277154 GCCACATCATCATTTTTGCTTATGC 60.277 40.000 0.00 0.00 40.20 3.14
737 775 5.813157 TGCCACATCATCATTTTTGCTTATG 59.187 36.000 0.00 0.00 0.00 1.90
738 776 5.979993 TGCCACATCATCATTTTTGCTTAT 58.020 33.333 0.00 0.00 0.00 1.73
739 777 5.402997 TGCCACATCATCATTTTTGCTTA 57.597 34.783 0.00 0.00 0.00 3.09
740 778 4.274602 TGCCACATCATCATTTTTGCTT 57.725 36.364 0.00 0.00 0.00 3.91
741 779 3.965379 TGCCACATCATCATTTTTGCT 57.035 38.095 0.00 0.00 0.00 3.91
742 780 3.998341 ACTTGCCACATCATCATTTTTGC 59.002 39.130 0.00 0.00 0.00 3.68
743 781 6.392354 ACTACTTGCCACATCATCATTTTTG 58.608 36.000 0.00 0.00 0.00 2.44
744 782 6.594788 ACTACTTGCCACATCATCATTTTT 57.405 33.333 0.00 0.00 0.00 1.94
745 783 6.594788 AACTACTTGCCACATCATCATTTT 57.405 33.333 0.00 0.00 0.00 1.82
746 784 7.701539 TTAACTACTTGCCACATCATCATTT 57.298 32.000 0.00 0.00 0.00 2.32
747 785 7.557358 TCATTAACTACTTGCCACATCATCATT 59.443 33.333 0.00 0.00 0.00 2.57
748 786 7.056006 TCATTAACTACTTGCCACATCATCAT 58.944 34.615 0.00 0.00 0.00 2.45
749 787 6.413892 TCATTAACTACTTGCCACATCATCA 58.586 36.000 0.00 0.00 0.00 3.07
750 788 6.017605 CCTCATTAACTACTTGCCACATCATC 60.018 42.308 0.00 0.00 0.00 2.92
751 789 5.824624 CCTCATTAACTACTTGCCACATCAT 59.175 40.000 0.00 0.00 0.00 2.45
752 790 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
753 791 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
754 792 5.189736 TCTCCTCATTAACTACTTGCCACAT 59.810 40.000 0.00 0.00 0.00 3.21
755 793 4.530553 TCTCCTCATTAACTACTTGCCACA 59.469 41.667 0.00 0.00 0.00 4.17
756 794 5.086104 TCTCCTCATTAACTACTTGCCAC 57.914 43.478 0.00 0.00 0.00 5.01
757 795 5.023452 TCTCTCCTCATTAACTACTTGCCA 58.977 41.667 0.00 0.00 0.00 4.92
758 796 5.452636 CCTCTCTCCTCATTAACTACTTGCC 60.453 48.000 0.00 0.00 0.00 4.52
759 797 5.596845 CCTCTCTCCTCATTAACTACTTGC 58.403 45.833 0.00 0.00 0.00 4.01
760 798 5.127845 TGCCTCTCTCCTCATTAACTACTTG 59.872 44.000 0.00 0.00 0.00 3.16
761 799 5.273208 TGCCTCTCTCCTCATTAACTACTT 58.727 41.667 0.00 0.00 0.00 2.24
762 800 4.873010 TGCCTCTCTCCTCATTAACTACT 58.127 43.478 0.00 0.00 0.00 2.57
763 801 5.599999 TTGCCTCTCTCCTCATTAACTAC 57.400 43.478 0.00 0.00 0.00 2.73
764 802 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
765 803 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
766 804 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
767 805 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
768 806 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
769 807 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
770 808 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
771 809 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
772 810 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
773 811 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
774 812 5.361285 TCTGTTACTCTATTTGCCTCTCTCC 59.639 44.000 0.00 0.00 0.00 3.71
775 813 6.458232 TCTGTTACTCTATTTGCCTCTCTC 57.542 41.667 0.00 0.00 0.00 3.20
776 814 6.859112 TTCTGTTACTCTATTTGCCTCTCT 57.141 37.500 0.00 0.00 0.00 3.10
777 815 9.202273 CATATTCTGTTACTCTATTTGCCTCTC 57.798 37.037 0.00 0.00 0.00 3.20
778 816 8.709308 ACATATTCTGTTACTCTATTTGCCTCT 58.291 33.333 0.00 0.00 32.90 3.69
779 817 8.894768 ACATATTCTGTTACTCTATTTGCCTC 57.105 34.615 0.00 0.00 32.90 4.70
803 841 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
804 842 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
805 843 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
806 844 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
807 845 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
808 846 3.793129 GCATTGGAAACCGCTATGTGATG 60.793 47.826 0.00 0.00 0.00 3.07
809 847 2.358898 GCATTGGAAACCGCTATGTGAT 59.641 45.455 0.00 0.00 0.00 3.06
810 848 1.742831 GCATTGGAAACCGCTATGTGA 59.257 47.619 0.00 0.00 0.00 3.58
811 849 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
812 850 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
813 851 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
814 852 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
815 853 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
816 854 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
817 855 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
818 856 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
819 857 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
820 858 7.320443 TGTAGACTCATTATGCATTGGAAAC 57.680 36.000 3.54 0.00 0.00 2.78
821 859 7.936496 TTGTAGACTCATTATGCATTGGAAA 57.064 32.000 3.54 0.00 0.00 3.13
822 860 7.611467 ACTTTGTAGACTCATTATGCATTGGAA 59.389 33.333 3.54 0.00 0.00 3.53
823 861 7.112122 ACTTTGTAGACTCATTATGCATTGGA 58.888 34.615 3.54 0.00 0.00 3.53
824 862 7.325660 ACTTTGTAGACTCATTATGCATTGG 57.674 36.000 3.54 0.00 0.00 3.16
835 873 9.162764 GCCTTCATTTATTACTTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
836 874 9.162764 TGCCTTCATTTATTACTTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
837 875 9.515226 TTGCCTTCATTTATTACTTTGTAGACT 57.485 29.630 0.00 0.00 0.00 3.24
838 876 9.556030 GTTGCCTTCATTTATTACTTTGTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
839 877 9.515226 AGTTGCCTTCATTTATTACTTTGTAGA 57.485 29.630 0.00 0.00 0.00 2.59
847 885 9.946165 GGTAACATAGTTGCCTTCATTTATTAC 57.054 33.333 9.36 0.00 0.00 1.89
848 886 9.688091 TGGTAACATAGTTGCCTTCATTTATTA 57.312 29.630 16.08 0.00 46.17 0.98
849 887 8.588290 TGGTAACATAGTTGCCTTCATTTATT 57.412 30.769 16.08 0.00 46.17 1.40
868 906 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
869 907 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
870 908 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
871 909 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
872 910 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
873 911 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
874 912 3.185880 AGTGGGTAGTGTCATAGGTGT 57.814 47.619 0.00 0.00 0.00 4.16
875 913 4.893524 TCATAGTGGGTAGTGTCATAGGTG 59.106 45.833 0.00 0.00 0.00 4.00
876 914 5.138758 TCATAGTGGGTAGTGTCATAGGT 57.861 43.478 0.00 0.00 0.00 3.08
877 915 6.042093 ACATTCATAGTGGGTAGTGTCATAGG 59.958 42.308 0.00 0.00 0.00 2.57
878 916 7.055667 ACATTCATAGTGGGTAGTGTCATAG 57.944 40.000 0.00 0.00 0.00 2.23
879 917 7.783119 ACTACATTCATAGTGGGTAGTGTCATA 59.217 37.037 0.00 0.00 42.06 2.15
880 918 5.957771 ACATTCATAGTGGGTAGTGTCAT 57.042 39.130 0.00 0.00 0.00 3.06
881 919 5.955959 ACTACATTCATAGTGGGTAGTGTCA 59.044 40.000 0.00 0.00 42.06 3.58
882 920 6.466885 ACTACATTCATAGTGGGTAGTGTC 57.533 41.667 0.00 0.00 42.06 3.67
883 921 7.398047 TGTTACTACATTCATAGTGGGTAGTGT 59.602 37.037 11.76 0.00 43.12 3.55
884 922 7.778083 TGTTACTACATTCATAGTGGGTAGTG 58.222 38.462 11.76 0.00 43.12 2.74
885 923 7.966339 TGTTACTACATTCATAGTGGGTAGT 57.034 36.000 0.00 0.00 44.74 2.73
887 925 9.871175 TCTATGTTACTACATTCATAGTGGGTA 57.129 33.333 0.00 0.00 42.29 3.69
888 926 8.639761 GTCTATGTTACTACATTCATAGTGGGT 58.360 37.037 0.00 0.00 42.29 4.51
889 927 8.861086 AGTCTATGTTACTACATTCATAGTGGG 58.139 37.037 0.00 0.00 42.29 4.61
928 966 9.401058 GGGAGTAACTTAGACTAGTAACATACA 57.599 37.037 0.00 0.00 0.00 2.29
929 967 8.845227 GGGGAGTAACTTAGACTAGTAACATAC 58.155 40.741 0.00 0.00 0.00 2.39
930 968 8.560039 TGGGGAGTAACTTAGACTAGTAACATA 58.440 37.037 0.00 0.00 0.00 2.29
931 969 7.341512 GTGGGGAGTAACTTAGACTAGTAACAT 59.658 40.741 0.00 0.00 0.00 2.71
932 970 6.660949 GTGGGGAGTAACTTAGACTAGTAACA 59.339 42.308 0.00 0.00 0.00 2.41
933 971 6.889177 AGTGGGGAGTAACTTAGACTAGTAAC 59.111 42.308 0.00 0.00 0.00 2.50
934 972 7.037342 AGTGGGGAGTAACTTAGACTAGTAA 57.963 40.000 0.00 0.00 0.00 2.24
935 973 6.649041 AGTGGGGAGTAACTTAGACTAGTA 57.351 41.667 0.00 0.00 0.00 1.82
936 974 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
937 975 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
938 976 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
939 977 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
940 978 5.068855 GGTCATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 32.58 2.59
941 979 5.206587 GGTCATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
942 980 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
943 981 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
944 982 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
945 983 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
946 984 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
947 985 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
948 986 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
949 987 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
950 988 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
951 989 0.639943 TAGGCTGGTCATAGTGGGGA 59.360 55.000 0.00 0.00 0.00 4.81
952 990 1.417890 CTTAGGCTGGTCATAGTGGGG 59.582 57.143 0.00 0.00 0.00 4.96
953 991 2.119495 ACTTAGGCTGGTCATAGTGGG 58.881 52.381 0.00 0.00 0.00 4.61
954 992 3.432326 GGAACTTAGGCTGGTCATAGTGG 60.432 52.174 0.00 0.00 0.00 4.00
955 993 3.432326 GGGAACTTAGGCTGGTCATAGTG 60.432 52.174 0.00 0.00 0.00 2.74
956 994 2.772515 GGGAACTTAGGCTGGTCATAGT 59.227 50.000 0.00 0.00 0.00 2.12
957 995 3.041946 AGGGAACTTAGGCTGGTCATAG 58.958 50.000 0.00 0.00 37.44 2.23
958 996 3.130734 AGGGAACTTAGGCTGGTCATA 57.869 47.619 0.00 0.00 37.44 2.15
959 997 1.972588 AGGGAACTTAGGCTGGTCAT 58.027 50.000 0.00 0.00 37.44 3.06
960 998 3.494561 AGGGAACTTAGGCTGGTCA 57.505 52.632 0.00 0.00 37.44 4.02
1027 1262 5.361285 TGGAAAAGAATCAGGAAACGGAAAA 59.639 36.000 0.00 0.00 38.30 2.29
1055 1290 3.992641 TCGGGAGGCAGGAGACCA 61.993 66.667 0.00 0.00 0.00 4.02
1071 1306 2.789203 CGCTGGCTAAGAACGCGTC 61.789 63.158 14.44 6.38 39.07 5.19
1089 1324 4.117685 CCTTGTACTTATAGACGTTGGGC 58.882 47.826 0.00 0.00 0.00 5.36
1090 1325 4.690122 CCCTTGTACTTATAGACGTTGGG 58.310 47.826 0.00 0.00 0.00 4.12
1091 1326 4.117685 GCCCTTGTACTTATAGACGTTGG 58.882 47.826 0.00 0.00 0.00 3.77
1092 1327 4.117685 GGCCCTTGTACTTATAGACGTTG 58.882 47.826 0.00 0.00 0.00 4.10
1093 1328 3.181483 CGGCCCTTGTACTTATAGACGTT 60.181 47.826 0.00 0.00 0.00 3.99
1094 1329 2.360165 CGGCCCTTGTACTTATAGACGT 59.640 50.000 0.00 0.00 0.00 4.34
1097 1332 1.338973 CGCGGCCCTTGTACTTATAGA 59.661 52.381 0.00 0.00 0.00 1.98
1171 1416 1.610673 AAAGCAGAGGAGGGCGAGA 60.611 57.895 0.00 0.00 34.54 4.04
1279 1664 3.365265 CTTGCACGCCCAACTCCC 61.365 66.667 0.00 0.00 0.00 4.30
1299 1685 1.597445 CGACGAAGGAACGGAGATAGC 60.597 57.143 0.00 0.00 37.61 2.97
1301 1687 0.379669 GCGACGAAGGAACGGAGATA 59.620 55.000 0.00 0.00 37.61 1.98
1361 1761 5.443283 AGACAACCATACGACCATACTCTA 58.557 41.667 0.00 0.00 0.00 2.43
1362 1762 4.279145 AGACAACCATACGACCATACTCT 58.721 43.478 0.00 0.00 0.00 3.24
1363 1763 4.650754 AGACAACCATACGACCATACTC 57.349 45.455 0.00 0.00 0.00 2.59
1364 1764 4.464951 TGAAGACAACCATACGACCATACT 59.535 41.667 0.00 0.00 0.00 2.12
1451 1859 2.621668 GGGCCATTACTCCTTCAAGCTT 60.622 50.000 4.39 0.00 0.00 3.74
1470 1878 4.347607 AGAATTCCTCCAACAATCTTGGG 58.652 43.478 0.65 0.00 39.96 4.12
1483 1891 6.637658 CGGACTAAATCGACTAAGAATTCCTC 59.362 42.308 0.65 0.00 0.00 3.71
1508 1916 6.307077 GGAAATCTATTTACGCAACACAAACC 59.693 38.462 0.00 0.00 0.00 3.27
1580 1989 1.340502 TGGGATCTGTTTGCCGCAATA 60.341 47.619 6.64 0.00 0.00 1.90
1585 1994 2.995258 CAAAATTGGGATCTGTTTGCCG 59.005 45.455 0.00 0.00 0.00 5.69
1613 2024 4.216257 CGGGGCTTATTTCTACATCCAATG 59.784 45.833 0.00 0.00 0.00 2.82
1653 2064 2.426024 CCTTCCCATGCACAATCAAGAG 59.574 50.000 0.00 0.00 0.00 2.85
1751 2200 6.884472 TCCATCTTCTGTGGGATAGTTTAA 57.116 37.500 0.00 0.00 37.34 1.52
1752 2201 6.884472 TTCCATCTTCTGTGGGATAGTTTA 57.116 37.500 0.00 0.00 37.34 2.01
1871 2498 5.600484 TGCCCCGTTAAATTGGATCAATATT 59.400 36.000 0.00 0.00 32.43 1.28
1873 2500 4.537751 TGCCCCGTTAAATTGGATCAATA 58.462 39.130 0.00 0.00 32.43 1.90
1912 2539 5.962031 TCTAGGGTTAGTTTCCTTCTATGCA 59.038 40.000 0.00 0.00 34.75 3.96
2008 3142 7.784037 TGGCAAATAAGCTAATCAACATGAAT 58.216 30.769 0.00 0.00 34.17 2.57
2144 3305 4.150804 CAGTTTAGTTCCTTGTCTCGAAGC 59.849 45.833 0.00 0.00 0.00 3.86
2149 3310 7.971183 ATTTCTCAGTTTAGTTCCTTGTCTC 57.029 36.000 0.00 0.00 0.00 3.36
2192 3380 5.250235 TCTAGTACTGCTCTTTGGATTCG 57.750 43.478 5.39 0.00 0.00 3.34
2323 3511 8.171337 AGGTAGTACTATTTTCCTTCCCAAAT 57.829 34.615 5.75 0.00 0.00 2.32
2326 3514 5.664457 GGAGGTAGTACTATTTTCCTTCCCA 59.336 44.000 5.75 0.00 0.00 4.37
2338 3526 3.264193 TCACCAAGACGGAGGTAGTACTA 59.736 47.826 0.00 0.00 36.07 1.82
2339 3527 2.040813 TCACCAAGACGGAGGTAGTACT 59.959 50.000 0.00 0.00 36.07 2.73
2340 3528 2.440409 TCACCAAGACGGAGGTAGTAC 58.560 52.381 0.00 0.00 36.07 2.73
2341 3529 2.885135 TCACCAAGACGGAGGTAGTA 57.115 50.000 0.00 0.00 36.07 1.82
2342 3530 2.005370 TTCACCAAGACGGAGGTAGT 57.995 50.000 0.00 0.00 36.07 2.73
2343 3531 3.611766 AATTCACCAAGACGGAGGTAG 57.388 47.619 0.00 0.00 36.07 3.18
2344 3532 4.159135 GTCTAATTCACCAAGACGGAGGTA 59.841 45.833 0.00 0.00 36.07 3.08
2345 3533 3.056035 GTCTAATTCACCAAGACGGAGGT 60.056 47.826 0.00 0.00 39.10 3.85
2346 3534 3.056107 TGTCTAATTCACCAAGACGGAGG 60.056 47.826 1.86 0.00 42.05 4.30
2347 3535 4.188247 TGTCTAATTCACCAAGACGGAG 57.812 45.455 1.86 0.00 42.05 4.63
2348 3536 4.819105 ATGTCTAATTCACCAAGACGGA 57.181 40.909 1.86 0.00 42.05 4.69
2349 3537 5.661458 AGTATGTCTAATTCACCAAGACGG 58.339 41.667 1.86 0.00 42.05 4.79
2350 3538 7.596749 AAAGTATGTCTAATTCACCAAGACG 57.403 36.000 1.86 0.00 42.05 4.18
2351 3539 9.871238 TCTAAAGTATGTCTAATTCACCAAGAC 57.129 33.333 0.00 0.00 40.05 3.01
2353 3541 9.877178 ACTCTAAAGTATGTCTAATTCACCAAG 57.123 33.333 0.00 0.00 32.59 3.61
2354 3542 9.653287 CACTCTAAAGTATGTCTAATTCACCAA 57.347 33.333 0.00 0.00 33.25 3.67
2355 3543 8.812972 ACACTCTAAAGTATGTCTAATTCACCA 58.187 33.333 0.00 0.00 33.25 4.17
2356 3544 9.088512 CACACTCTAAAGTATGTCTAATTCACC 57.911 37.037 0.00 0.00 33.25 4.02
2357 3545 9.856488 TCACACTCTAAAGTATGTCTAATTCAC 57.144 33.333 0.00 0.00 31.60 3.18
2360 3548 9.319143 GCATCACACTCTAAAGTATGTCTAATT 57.681 33.333 0.00 0.00 31.60 1.40
2361 3549 8.478066 TGCATCACACTCTAAAGTATGTCTAAT 58.522 33.333 0.00 0.00 31.60 1.73
2362 3550 7.759886 GTGCATCACACTCTAAAGTATGTCTAA 59.240 37.037 0.00 0.00 46.41 2.10
2363 3551 7.258441 GTGCATCACACTCTAAAGTATGTCTA 58.742 38.462 0.00 0.00 46.41 2.59
2364 3552 6.102663 GTGCATCACACTCTAAAGTATGTCT 58.897 40.000 0.00 0.00 46.41 3.41
2365 3553 6.337853 GTGCATCACACTCTAAAGTATGTC 57.662 41.667 0.00 0.00 46.41 3.06
2379 3567 3.609879 CGAAGCAAAATGAGTGCATCACA 60.610 43.478 0.00 0.00 44.74 3.58
2380 3568 2.912967 CGAAGCAAAATGAGTGCATCAC 59.087 45.455 0.00 0.00 44.74 3.06
2381 3569 2.553602 ACGAAGCAAAATGAGTGCATCA 59.446 40.909 0.00 0.00 44.74 3.07
2382 3570 3.207474 ACGAAGCAAAATGAGTGCATC 57.793 42.857 0.00 0.00 44.74 3.91
2383 3571 4.156556 ACATACGAAGCAAAATGAGTGCAT 59.843 37.500 0.00 0.00 44.74 3.96
2384 3572 3.501828 ACATACGAAGCAAAATGAGTGCA 59.498 39.130 0.00 0.00 44.74 4.57
2385 3573 4.083581 ACATACGAAGCAAAATGAGTGC 57.916 40.909 0.00 0.00 42.55 4.40
2386 3574 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
2387 3575 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
2388 3576 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
2389 3577 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
2390 3578 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
2391 3579 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
2392 3580 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
2393 3581 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
2394 3582 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
2395 3583 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
2396 3584 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
2397 3585 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
2398 3586 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
2399 3587 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
2400 3588 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2401 3589 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2403 3591 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2404 3592 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2405 3593 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2406 3594 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2407 3595 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2408 3596 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2409 3597 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2410 3598 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2411 3599 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2427 3615 8.947115 CCTTCGTTCCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
2428 3616 8.182227 CCCTTCGTTCCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
2429 3617 7.886446 TCCCTTCGTTCCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
2430 3618 7.399634 TCCCTTCGTTCCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
2431 3619 6.954232 TCCCTTCGTTCCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
2432 3620 6.822170 ACTCCCTTCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
2433 3621 6.718294 ACTCCCTTCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
2434 3622 8.774586 CATACTCCCTTCGTTCCTAAATATTTG 58.225 37.037 11.05 1.40 0.00 2.32
2435 3623 8.491958 ACATACTCCCTTCGTTCCTAAATATTT 58.508 33.333 5.89 5.89 0.00 1.40
2436 3624 7.931948 CACATACTCCCTTCGTTCCTAAATATT 59.068 37.037 0.00 0.00 0.00 1.28
2437 3625 7.289317 TCACATACTCCCTTCGTTCCTAAATAT 59.711 37.037 0.00 0.00 0.00 1.28
2438 3626 6.608405 TCACATACTCCCTTCGTTCCTAAATA 59.392 38.462 0.00 0.00 0.00 1.40
2439 3627 5.424252 TCACATACTCCCTTCGTTCCTAAAT 59.576 40.000 0.00 0.00 0.00 1.40
2440 3628 4.773674 TCACATACTCCCTTCGTTCCTAAA 59.226 41.667 0.00 0.00 0.00 1.85
2441 3629 4.159135 GTCACATACTCCCTTCGTTCCTAA 59.841 45.833 0.00 0.00 0.00 2.69
2442 3630 3.698040 GTCACATACTCCCTTCGTTCCTA 59.302 47.826 0.00 0.00 0.00 2.94
2443 3631 2.496470 GTCACATACTCCCTTCGTTCCT 59.504 50.000 0.00 0.00 0.00 3.36
2444 3632 2.232941 TGTCACATACTCCCTTCGTTCC 59.767 50.000 0.00 0.00 0.00 3.62
2445 3633 3.587797 TGTCACATACTCCCTTCGTTC 57.412 47.619 0.00 0.00 0.00 3.95
2446 3634 3.576982 TCTTGTCACATACTCCCTTCGTT 59.423 43.478 0.00 0.00 0.00 3.85
2447 3635 3.162666 TCTTGTCACATACTCCCTTCGT 58.837 45.455 0.00 0.00 0.00 3.85
2448 3636 3.868757 TCTTGTCACATACTCCCTTCG 57.131 47.619 0.00 0.00 0.00 3.79
2485 3673 7.228108 TATCACTAGATTTCTACACGGGTGTAG 59.772 40.741 25.74 25.74 46.59 2.74
2486 3674 5.255687 TCACTAGATTTCTACACGGGTGTA 58.744 41.667 0.00 10.91 44.42 2.90
2487 3675 4.084287 TCACTAGATTTCTACACGGGTGT 58.916 43.478 0.00 9.66 46.87 4.16
2488 3676 4.713824 TCACTAGATTTCTACACGGGTG 57.286 45.455 0.00 0.00 0.00 4.61
2489 3677 7.943447 AGTATATCACTAGATTTCTACACGGGT 59.057 37.037 0.00 0.00 34.98 5.28
2490 3678 8.338072 AGTATATCACTAGATTTCTACACGGG 57.662 38.462 0.00 0.00 34.98 5.28
2528 3716 9.368674 TCGATTTGAGGAATTAAATACGTGTTA 57.631 29.630 0.00 0.00 0.00 2.41
2529 3717 8.259049 TCGATTTGAGGAATTAAATACGTGTT 57.741 30.769 0.00 0.00 0.00 3.32
2530 3718 7.837202 TCGATTTGAGGAATTAAATACGTGT 57.163 32.000 0.00 0.00 0.00 4.49
2531 3719 9.793245 GTATCGATTTGAGGAATTAAATACGTG 57.207 33.333 1.71 0.00 0.00 4.49
2532 3720 9.537192 TGTATCGATTTGAGGAATTAAATACGT 57.463 29.630 1.71 0.00 0.00 3.57
2533 3721 9.793245 GTGTATCGATTTGAGGAATTAAATACG 57.207 33.333 1.71 0.00 0.00 3.06
2534 3722 9.793245 CGTGTATCGATTTGAGGAATTAAATAC 57.207 33.333 1.71 0.00 42.86 1.89
2535 3723 9.752961 TCGTGTATCGATTTGAGGAATTAAATA 57.247 29.630 1.71 0.00 44.01 1.40
2536 3724 8.657074 TCGTGTATCGATTTGAGGAATTAAAT 57.343 30.769 1.71 0.00 44.01 1.40
2551 3739 5.975344 GGTGAATAAGTCATTCGTGTATCGA 59.025 40.000 0.00 0.00 45.25 3.59
2552 3740 5.977725 AGGTGAATAAGTCATTCGTGTATCG 59.022 40.000 0.00 0.00 45.25 2.92
2553 3741 8.350722 TCTAGGTGAATAAGTCATTCGTGTATC 58.649 37.037 0.00 0.00 45.25 2.24
2554 3742 8.136165 GTCTAGGTGAATAAGTCATTCGTGTAT 58.864 37.037 0.00 0.00 45.25 2.29
2555 3743 7.478322 GTCTAGGTGAATAAGTCATTCGTGTA 58.522 38.462 0.00 0.00 45.25 2.90
2556 3744 6.331061 GTCTAGGTGAATAAGTCATTCGTGT 58.669 40.000 0.00 0.00 45.25 4.49
2557 3745 5.455849 CGTCTAGGTGAATAAGTCATTCGTG 59.544 44.000 0.00 0.00 45.25 4.35
2558 3746 5.450137 CCGTCTAGGTGAATAAGTCATTCGT 60.450 44.000 0.00 0.00 45.25 3.85
2559 3747 4.976731 CCGTCTAGGTGAATAAGTCATTCG 59.023 45.833 0.00 0.00 45.25 3.34
2560 3748 6.145338 TCCGTCTAGGTGAATAAGTCATTC 57.855 41.667 0.00 0.00 40.27 2.67
2561 3749 5.069251 CCTCCGTCTAGGTGAATAAGTCATT 59.931 44.000 0.00 0.00 38.90 2.57
2562 3750 4.585162 CCTCCGTCTAGGTGAATAAGTCAT 59.415 45.833 0.00 0.00 38.90 3.06
2563 3751 3.952323 CCTCCGTCTAGGTGAATAAGTCA 59.048 47.826 0.00 0.00 41.99 3.41
2564 3752 4.571372 CCTCCGTCTAGGTGAATAAGTC 57.429 50.000 0.00 0.00 41.99 3.01
2574 3762 1.773653 ACCCTACTACCTCCGTCTAGG 59.226 57.143 0.00 0.00 42.82 3.02
2575 3763 2.437281 TCACCCTACTACCTCCGTCTAG 59.563 54.545 0.00 0.00 0.00 2.43
2576 3764 2.481441 TCACCCTACTACCTCCGTCTA 58.519 52.381 0.00 0.00 0.00 2.59
2577 3765 1.293062 TCACCCTACTACCTCCGTCT 58.707 55.000 0.00 0.00 0.00 4.18
2578 3766 2.134789 TTCACCCTACTACCTCCGTC 57.865 55.000 0.00 0.00 0.00 4.79
2579 3767 2.174360 GTTTCACCCTACTACCTCCGT 58.826 52.381 0.00 0.00 0.00 4.69
2580 3768 1.479730 GGTTTCACCCTACTACCTCCG 59.520 57.143 0.00 0.00 30.04 4.63
2660 3856 8.978874 AGTTTTAGGCCTTTTTCATTTCATTT 57.021 26.923 12.58 0.00 0.00 2.32
2773 3969 4.201950 GCTATTTGGATCACGCAGAACAAT 60.202 41.667 0.00 0.00 30.53 2.71
2813 4009 4.021544 TGTGCCTTCATTTATGGAAACCAC 60.022 41.667 0.00 0.00 35.80 4.16
2860 4056 5.241728 ACCATAAGTGCTCTCCAAAACTTTC 59.758 40.000 0.00 0.00 34.76 2.62
3108 4880 1.816074 TCGACTGTTGCCATAAACCC 58.184 50.000 0.00 0.00 0.00 4.11
3127 4899 0.837272 ACCTATAGTTGCCACGCCAT 59.163 50.000 0.00 0.00 0.00 4.40
3289 5080 2.444033 TTCCCTAAGACCCCTCCAAA 57.556 50.000 0.00 0.00 0.00 3.28
3342 5137 8.807948 AGTTGTTTGCTACCAATCTATGTAAT 57.192 30.769 0.00 0.00 0.00 1.89
3350 5145 6.508777 TGGTTTTAGTTGTTTGCTACCAATC 58.491 36.000 0.00 0.00 0.00 2.67
3704 5753 1.165907 ACTTGTCATGGGTGCACACG 61.166 55.000 20.43 2.98 0.00 4.49
3900 5951 6.385843 TCAACACATTTTGCACCATGTATAC 58.614 36.000 9.18 0.00 32.16 1.47
3942 5993 8.540388 GTGAAGTGGGCTCCATTATATAAGATA 58.460 37.037 1.02 0.00 35.28 1.98
4329 6441 2.597455 CTCACAAGGAAATTGGGGTGT 58.403 47.619 0.00 0.00 43.03 4.16
4345 6458 1.227793 GCATGGCTAGGCTCCTCAC 60.228 63.158 18.18 0.00 0.00 3.51
4389 6502 3.039202 GCCATGAAGAACGTGCCGG 62.039 63.158 0.00 0.00 34.47 6.13
4520 6645 2.799017 TGCAGAGAATCAATGCCACTT 58.201 42.857 7.14 0.00 35.63 3.16
4604 6729 0.458669 GAGAGCCCATGCCATTGTTG 59.541 55.000 0.00 0.00 38.69 3.33
4704 6841 4.033009 TGAGGAGCTATCTCATTGTTGGA 58.967 43.478 13.39 0.00 41.13 3.53
4710 6847 5.601729 TCATTGACTGAGGAGCTATCTCATT 59.398 40.000 16.58 12.51 40.07 2.57
4718 6855 4.840716 AGATTTCATTGACTGAGGAGCT 57.159 40.909 0.00 0.00 34.68 4.09
4833 6970 7.276438 GGAATTTGAATCATCCTTTAACACTGC 59.724 37.037 0.00 0.00 0.00 4.40
4841 6978 8.556213 CAAATGTGGAATTTGAATCATCCTTT 57.444 30.769 5.10 0.00 40.42 3.11
4903 7040 2.076863 GGTCTTCATTCCGTGAGTTGG 58.923 52.381 0.00 0.00 38.29 3.77
4936 7073 4.607293 AAGTTGGAATTTGAAGCTTCCC 57.393 40.909 23.42 16.51 40.22 3.97
4963 7100 5.250543 TCCATGACTTCTTTACCCTTCATCA 59.749 40.000 0.00 0.00 0.00 3.07
4964 7101 5.745227 TCCATGACTTCTTTACCCTTCATC 58.255 41.667 0.00 0.00 0.00 2.92
4965 7102 5.779241 TCCATGACTTCTTTACCCTTCAT 57.221 39.130 0.00 0.00 0.00 2.57
5082 7222 0.964860 TGAATGCACCGGTCCATTGG 60.965 55.000 28.21 5.65 32.20 3.16
5133 7273 1.521681 CGGTTCTTCCATCCTCCGC 60.522 63.158 0.00 0.00 35.57 5.54
5224 7364 4.529377 AGATGCCCATTGATTTTGTCAGTT 59.471 37.500 0.00 0.00 38.29 3.16
5403 7555 1.133792 AGCAGCACCAGTTTTACCACT 60.134 47.619 0.00 0.00 0.00 4.00
5492 7644 3.136443 TGGGCAGGGAACAATACTGATAG 59.864 47.826 0.00 0.00 34.21 2.08
5723 7901 5.417580 AGAAAGCTTTGTTACTTCAACCACA 59.582 36.000 18.30 0.00 36.20 4.17
5816 7994 1.450312 CCTCATCTCGGTGGGCAAC 60.450 63.158 0.00 0.00 0.00 4.17
5842 8020 7.489239 AGGCAAATAAATAGCAAAGGGTAAA 57.511 32.000 0.00 0.00 0.00 2.01
5883 8066 7.433680 AGAAACAAGAATGGTTACAATCCAAC 58.566 34.615 0.00 0.00 36.33 3.77
5891 8074 8.727910 CCTAGGTTTAGAAACAAGAATGGTTAC 58.272 37.037 0.00 0.00 36.33 2.50
5974 8158 1.202076 GCTTCACCAACAATAGCTCGC 60.202 52.381 0.00 0.00 0.00 5.03
6191 8391 7.394816 ACCCATGAGCCAAATATATACAGTAC 58.605 38.462 0.00 0.00 0.00 2.73
6291 8495 1.305201 GGAACCTTGTCGTTTCTGCA 58.695 50.000 0.00 0.00 0.00 4.41
6519 8738 2.609747 AGGAGCTGAAGTTGTAGGACA 58.390 47.619 0.00 0.00 0.00 4.02
6555 8777 1.260561 CTGTACGTGGTTTGCAGACAC 59.739 52.381 9.87 8.37 0.00 3.67
6571 8793 1.347707 CAAAGCCTGAGTGGACCTGTA 59.652 52.381 0.00 0.00 38.35 2.74
6638 8860 0.171455 GGATGAGTTGCTCGAGTCGT 59.829 55.000 15.13 4.68 32.35 4.34
6800 9030 1.594293 ACTTGGACGACAACAGCCG 60.594 57.895 0.00 0.00 34.76 5.52
6947 9186 0.398522 ACACCCTATGATCGGCCTCA 60.399 55.000 0.00 0.00 0.00 3.86
6953 9192 2.035193 CCTCAGTGACACCCTATGATCG 59.965 54.545 0.84 0.00 0.00 3.69
6967 9206 3.322369 TGTTTATGTACACGCCTCAGTG 58.678 45.455 0.00 0.00 46.83 3.66
6985 9224 1.134175 CCAAGTGTTTGCTCCGTTGTT 59.866 47.619 0.00 0.00 32.79 2.83
7058 9297 7.559835 TTAACACGTCAATGCATTATGTTTG 57.440 32.000 23.96 15.76 31.63 2.93
7183 9422 4.269183 TCATATTTGATTCAACGGGCACT 58.731 39.130 0.00 0.00 0.00 4.40
7232 9471 9.874205 TCATTTGATTTGGATGATTTAAGGTTC 57.126 29.630 0.00 0.00 0.00 3.62
7263 9502 6.925610 AGTTATCATGTACATGCACGATTT 57.074 33.333 27.71 9.44 38.65 2.17
7370 9623 9.362151 TGGACACTCACATATCACATAAGTATA 57.638 33.333 0.00 0.00 0.00 1.47
7371 9624 8.250143 TGGACACTCACATATCACATAAGTAT 57.750 34.615 0.00 0.00 0.00 2.12
7372 9625 7.654022 TGGACACTCACATATCACATAAGTA 57.346 36.000 0.00 0.00 0.00 2.24
7425 9692 0.389391 ATTCACGTGCTATCTCCCGG 59.611 55.000 11.67 0.00 0.00 5.73
7436 9703 3.058708 AGAGTGCACAATTCATTCACGTG 60.059 43.478 21.04 9.94 33.28 4.49
7437 9704 3.141398 AGAGTGCACAATTCATTCACGT 58.859 40.909 21.04 0.00 33.28 4.49
7438 9705 3.434641 AGAGAGTGCACAATTCATTCACG 59.565 43.478 21.04 0.00 33.28 4.35
7439 9706 4.435253 CGAGAGAGTGCACAATTCATTCAC 60.435 45.833 21.04 4.50 0.00 3.18
7473 9743 2.692041 GCCCATGGAGAAAGGAGATTTG 59.308 50.000 15.22 0.00 0.00 2.32
7511 9781 5.749462 AGGGAAAGAAATAGATGGAGTGTG 58.251 41.667 0.00 0.00 0.00 3.82
7512 9782 5.104318 GGAGGGAAAGAAATAGATGGAGTGT 60.104 44.000 0.00 0.00 0.00 3.55
7529 9799 6.069847 ACGATTTATAACCTTGAAGGAGGGAA 60.070 38.462 19.83 6.28 41.31 3.97
7547 9817 6.344500 ACTTACGAGGTAGAGAGACGATTTA 58.656 40.000 0.00 0.00 0.00 1.40
7587 9862 1.967319 TCAACAAAGAGAGGGTGTGC 58.033 50.000 0.00 0.00 0.00 4.57
7610 9885 0.951558 CGGAATTAAAGGGATGGGCG 59.048 55.000 0.00 0.00 0.00 6.13
7616 9891 1.064979 GGGTGAGCGGAATTAAAGGGA 60.065 52.381 0.00 0.00 0.00 4.20
7647 9922 9.914131 ATTCAAAAAGGCTTATTAGAAAGACAC 57.086 29.630 0.00 0.00 36.92 3.67
7723 10043 6.713762 TTTTGAAAAGAGAGAAAGGATGCA 57.286 33.333 0.00 0.00 0.00 3.96
7745 10065 3.262420 AGATGTATGCTCGACGCTTTTT 58.738 40.909 8.07 0.00 40.11 1.94
7777 10097 3.733988 CGATGCTTAAAGTCGTCCTAGCA 60.734 47.826 0.00 0.00 42.14 3.49
7783 10103 1.355971 TGCCGATGCTTAAAGTCGTC 58.644 50.000 0.00 0.00 38.71 4.20
7891 10211 8.800972 CACAAGTCAAAATTGATGCATATACAC 58.199 33.333 0.00 0.00 39.73 2.90
7907 10227 5.913137 ATTGACCAAAGACACAAGTCAAA 57.087 34.783 7.84 0.00 46.91 2.69
7941 10261 0.391263 GGGGTAAGCACAAGAGTCGG 60.391 60.000 0.00 0.00 0.00 4.79
7944 10264 2.028385 CGTAAGGGGTAAGCACAAGAGT 60.028 50.000 0.00 0.00 0.00 3.24
7948 10268 2.934886 AACGTAAGGGGTAAGCACAA 57.065 45.000 0.00 0.00 46.39 3.33
7980 10300 2.642807 TGCTTCCTTTACACCCTTAGCT 59.357 45.455 0.00 0.00 0.00 3.32
7981 10301 2.747989 GTGCTTCCTTTACACCCTTAGC 59.252 50.000 0.00 0.00 0.00 3.09
7986 10306 3.320826 ACAATTGTGCTTCCTTTACACCC 59.679 43.478 11.07 0.00 33.30 4.61
8003 10323 5.975693 TTTTCGGCTTTCTCCATACAATT 57.024 34.783 0.00 0.00 0.00 2.32
8019 10376 4.035017 GTGTTGTGACTGTCAATTTTCGG 58.965 43.478 12.81 0.00 0.00 4.30
8025 10382 0.581529 CGCGTGTTGTGACTGTCAAT 59.418 50.000 12.81 0.00 0.00 2.57
8031 10388 2.032377 CCAATTTACGCGTGTTGTGACT 60.032 45.455 24.59 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.