Multiple sequence alignment - TraesCS7B01G133900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G133900 chr7B 100.000 4169 0 0 1 4169 162926082 162921914 0.000000e+00 7699.0
1 TraesCS7B01G133900 chr7D 94.520 3157 116 25 314 3428 198499649 198502790 0.000000e+00 4819.0
2 TraesCS7B01G133900 chr7D 81.119 286 42 8 1 284 198438002 198438277 7.020000e-53 219.0
3 TraesCS7B01G133900 chr7A 89.921 3532 192 92 96 3555 207545669 207549108 0.000000e+00 4399.0
4 TraesCS7B01G133900 chr7A 84.833 389 37 12 3521 3895 207549117 207549497 5.090000e-99 372.0
5 TraesCS7B01G133900 chr7A 83.929 112 14 3 1 110 207528927 207529036 2.050000e-18 104.0
6 TraesCS7B01G133900 chr6D 82.134 1153 185 15 1880 3029 399219975 399218841 0.000000e+00 968.0
7 TraesCS7B01G133900 chr6D 73.211 1090 243 40 1899 2971 56552000 56553057 2.390000e-92 350.0
8 TraesCS7B01G133900 chr6D 89.286 280 25 4 3891 4169 432677933 432677658 3.090000e-91 346.0
9 TraesCS7B01G133900 chr6D 84.545 110 17 0 2653 2762 44420390 44420281 4.410000e-20 110.0
10 TraesCS7B01G133900 chr6A 81.873 1153 188 14 1880 3029 545319987 545318853 0.000000e+00 952.0
11 TraesCS7B01G133900 chr6A 73.497 1098 240 44 1899 2978 71066758 71067822 6.580000e-98 368.0
12 TraesCS7B01G133900 chr6B 81.787 1153 189 14 1880 3029 597557864 597556730 0.000000e+00 946.0
13 TraesCS7B01G133900 chr6B 92.419 277 13 5 3890 4164 159399880 159399610 5.050000e-104 388.0
14 TraesCS7B01G133900 chr6B 90.217 276 21 5 3896 4169 449845036 449844765 5.130000e-94 355.0
15 TraesCS7B01G133900 chr6B 72.719 1074 232 50 1921 2971 127039829 127040864 1.880000e-78 303.0
16 TraesCS7B01G133900 chr4A 94.007 267 12 3 3896 4161 714788514 714788777 6.490000e-108 401.0
17 TraesCS7B01G133900 chr4A 89.964 279 20 6 3895 4169 672526248 672526522 1.840000e-93 353.0
18 TraesCS7B01G133900 chr4A 89.818 275 24 4 3898 4169 574507074 574506801 2.390000e-92 350.0
19 TraesCS7B01G133900 chr1B 92.419 277 15 5 3896 4169 652303234 652303507 1.410000e-104 390.0
20 TraesCS7B01G133900 chr3B 90.545 275 22 4 3896 4169 803964073 803964344 1.100000e-95 361.0
21 TraesCS7B01G133900 chr3D 90.323 279 20 7 3896 4169 25967601 25967325 3.960000e-95 359.0
22 TraesCS7B01G133900 chr4D 79.916 239 40 6 3582 3818 6375465 6375697 7.170000e-38 169.0
23 TraesCS7B01G133900 chr4B 94.805 77 4 0 3582 3658 11595192 11595268 2.040000e-23 121.0
24 TraesCS7B01G133900 chr5D 76.923 182 30 12 6 180 456578552 456578376 4.440000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G133900 chr7B 162921914 162926082 4168 True 7699.0 7699 100.000 1 4169 1 chr7B.!!$R1 4168
1 TraesCS7B01G133900 chr7D 198499649 198502790 3141 False 4819.0 4819 94.520 314 3428 1 chr7D.!!$F2 3114
2 TraesCS7B01G133900 chr7A 207545669 207549497 3828 False 2385.5 4399 87.377 96 3895 2 chr7A.!!$F2 3799
3 TraesCS7B01G133900 chr6D 399218841 399219975 1134 True 968.0 968 82.134 1880 3029 1 chr6D.!!$R2 1149
4 TraesCS7B01G133900 chr6D 56552000 56553057 1057 False 350.0 350 73.211 1899 2971 1 chr6D.!!$F1 1072
5 TraesCS7B01G133900 chr6A 545318853 545319987 1134 True 952.0 952 81.873 1880 3029 1 chr6A.!!$R1 1149
6 TraesCS7B01G133900 chr6A 71066758 71067822 1064 False 368.0 368 73.497 1899 2978 1 chr6A.!!$F1 1079
7 TraesCS7B01G133900 chr6B 597556730 597557864 1134 True 946.0 946 81.787 1880 3029 1 chr6B.!!$R3 1149
8 TraesCS7B01G133900 chr6B 127039829 127040864 1035 False 303.0 303 72.719 1921 2971 1 chr6B.!!$F1 1050

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
85 86 0.037734 AGGGTTTTTCGGTGGCTAGG 59.962 55.0 0.00 0.0 0.00 3.02 F
1051 1100 0.032615 AGATGAAGTCCCGGAGCTCT 60.033 55.0 14.64 0.0 0.00 4.09 F
1310 1359 0.676466 CAGGGAATACAGCCGTTGCA 60.676 55.0 0.00 0.0 41.13 4.08 F
1806 1893 0.914644 TCAGCCCAAGGATGAGGAAG 59.085 55.0 0.00 0.0 43.58 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1988 2075 0.191064 AGGGTCTGGTCTTCCACTCA 59.809 55.000 0.00 0.0 39.03 3.41 R
2822 2909 0.604578 GCACCACGTACTCCAGGTAA 59.395 55.000 0.00 0.0 32.01 2.85 R
2996 3083 1.003355 CTTGAGCGCCTGGAGGAAA 60.003 57.895 2.29 0.0 37.39 3.13 R
3749 3913 1.019805 AACGAAAGCCTTCTAGCCGC 61.020 55.000 0.00 0.0 0.00 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.053632 TCCACTCTACAATGACATGAATGT 57.946 37.500 0.00 0.00 45.16 2.71
24 25 5.876460 TCCACTCTACAATGACATGAATGTG 59.124 40.000 0.00 0.00 41.95 3.21
25 26 5.065602 CCACTCTACAATGACATGAATGTGG 59.934 44.000 0.00 0.00 41.95 4.17
26 27 5.065602 CACTCTACAATGACATGAATGTGGG 59.934 44.000 0.00 0.00 41.95 4.61
27 28 5.178096 TCTACAATGACATGAATGTGGGT 57.822 39.130 0.00 0.00 41.95 4.51
28 29 6.070251 ACTCTACAATGACATGAATGTGGGTA 60.070 38.462 0.00 0.00 41.95 3.69
29 30 6.348498 TCTACAATGACATGAATGTGGGTAG 58.652 40.000 0.00 7.19 41.95 3.18
30 31 3.696051 ACAATGACATGAATGTGGGTAGC 59.304 43.478 0.00 0.00 41.95 3.58
31 32 3.939740 ATGACATGAATGTGGGTAGCT 57.060 42.857 0.00 0.00 41.95 3.32
32 33 2.989909 TGACATGAATGTGGGTAGCTG 58.010 47.619 0.00 0.00 41.95 4.24
33 34 2.292267 GACATGAATGTGGGTAGCTGG 58.708 52.381 0.00 0.00 41.95 4.85
34 35 1.027357 CATGAATGTGGGTAGCTGGC 58.973 55.000 0.00 0.00 0.00 4.85
35 36 0.464373 ATGAATGTGGGTAGCTGGCG 60.464 55.000 0.00 0.00 0.00 5.69
36 37 2.438434 AATGTGGGTAGCTGGCGC 60.438 61.111 0.00 0.00 0.00 6.53
37 38 3.995506 AATGTGGGTAGCTGGCGCC 62.996 63.158 22.73 22.73 36.60 6.53
66 67 4.884257 GCGTGCGGGCGAGGAATA 62.884 66.667 0.00 0.00 0.00 1.75
67 68 2.658593 CGTGCGGGCGAGGAATAG 60.659 66.667 0.00 0.00 0.00 1.73
68 69 2.280186 GTGCGGGCGAGGAATAGG 60.280 66.667 0.00 0.00 0.00 2.57
69 70 3.546543 TGCGGGCGAGGAATAGGG 61.547 66.667 0.00 0.00 0.00 3.53
70 71 3.547513 GCGGGCGAGGAATAGGGT 61.548 66.667 0.00 0.00 0.00 4.34
71 72 3.103091 GCGGGCGAGGAATAGGGTT 62.103 63.158 0.00 0.00 0.00 4.11
72 73 1.525442 CGGGCGAGGAATAGGGTTT 59.475 57.895 0.00 0.00 0.00 3.27
73 74 0.107361 CGGGCGAGGAATAGGGTTTT 60.107 55.000 0.00 0.00 0.00 2.43
74 75 1.680860 CGGGCGAGGAATAGGGTTTTT 60.681 52.381 0.00 0.00 0.00 1.94
75 76 2.022195 GGGCGAGGAATAGGGTTTTTC 58.978 52.381 0.00 0.00 0.00 2.29
76 77 1.669265 GGCGAGGAATAGGGTTTTTCG 59.331 52.381 0.00 0.00 0.00 3.46
77 78 1.669265 GCGAGGAATAGGGTTTTTCGG 59.331 52.381 0.00 0.00 0.00 4.30
78 79 2.938314 GCGAGGAATAGGGTTTTTCGGT 60.938 50.000 0.00 0.00 0.00 4.69
79 80 2.676342 CGAGGAATAGGGTTTTTCGGTG 59.324 50.000 0.00 0.00 0.00 4.94
80 81 3.014623 GAGGAATAGGGTTTTTCGGTGG 58.985 50.000 0.00 0.00 0.00 4.61
81 82 1.475280 GGAATAGGGTTTTTCGGTGGC 59.525 52.381 0.00 0.00 0.00 5.01
82 83 2.443416 GAATAGGGTTTTTCGGTGGCT 58.557 47.619 0.00 0.00 0.00 4.75
83 84 3.613030 GAATAGGGTTTTTCGGTGGCTA 58.387 45.455 0.00 0.00 0.00 3.93
84 85 2.773993 TAGGGTTTTTCGGTGGCTAG 57.226 50.000 0.00 0.00 0.00 3.42
85 86 0.037734 AGGGTTTTTCGGTGGCTAGG 59.962 55.000 0.00 0.00 0.00 3.02
86 87 0.963856 GGGTTTTTCGGTGGCTAGGG 60.964 60.000 0.00 0.00 0.00 3.53
87 88 1.592400 GGTTTTTCGGTGGCTAGGGC 61.592 60.000 0.00 0.00 37.82 5.19
88 89 1.673009 TTTTTCGGTGGCTAGGGCG 60.673 57.895 0.00 0.00 39.81 6.13
89 90 2.114488 TTTTTCGGTGGCTAGGGCGA 62.114 55.000 0.00 0.00 39.81 5.54
90 91 1.906105 TTTTCGGTGGCTAGGGCGAT 61.906 55.000 0.00 0.00 39.81 4.58
91 92 2.306255 TTTCGGTGGCTAGGGCGATC 62.306 60.000 0.00 0.00 39.81 3.69
92 93 3.536917 CGGTGGCTAGGGCGATCA 61.537 66.667 0.00 0.00 39.81 2.92
93 94 2.423446 GGTGGCTAGGGCGATCAG 59.577 66.667 0.00 0.00 39.81 2.90
94 95 2.423446 GTGGCTAGGGCGATCAGG 59.577 66.667 0.00 0.00 39.81 3.86
100 101 0.671251 CTAGGGCGATCAGGAGTGAC 59.329 60.000 0.00 0.00 34.75 3.67
105 106 1.139734 CGATCAGGAGTGACCGTGG 59.860 63.158 0.00 0.00 44.74 4.94
138 139 0.753848 GCCCGCAAGCCCCTAATTTA 60.754 55.000 0.00 0.00 0.00 1.40
142 143 3.222603 CCGCAAGCCCCTAATTTATCTT 58.777 45.455 0.00 0.00 0.00 2.40
143 144 3.253432 CCGCAAGCCCCTAATTTATCTTC 59.747 47.826 0.00 0.00 0.00 2.87
144 145 3.882888 CGCAAGCCCCTAATTTATCTTCA 59.117 43.478 0.00 0.00 0.00 3.02
149 150 7.260603 CAAGCCCCTAATTTATCTTCAGTTTG 58.739 38.462 0.00 0.00 0.00 2.93
152 153 5.221048 CCCCTAATTTATCTTCAGTTTGCGG 60.221 44.000 0.00 0.00 0.00 5.69
156 157 2.691409 TATCTTCAGTTTGCGGGAGG 57.309 50.000 0.00 0.00 0.00 4.30
189 190 3.112709 GCTCGGCGGAGACACAAC 61.113 66.667 24.11 2.25 43.27 3.32
190 191 2.338620 CTCGGCGGAGACACAACA 59.661 61.111 15.82 0.00 43.27 3.33
191 192 2.022129 CTCGGCGGAGACACAACAC 61.022 63.158 15.82 0.00 43.27 3.32
192 193 2.279851 CGGCGGAGACACAACACA 60.280 61.111 0.00 0.00 27.25 3.72
193 194 1.667830 CGGCGGAGACACAACACAT 60.668 57.895 0.00 0.00 27.25 3.21
195 196 1.298859 GGCGGAGACACAACACATCC 61.299 60.000 0.00 0.00 31.66 3.51
196 197 2.445274 CGGAGACACAACACATCCG 58.555 57.895 0.00 0.00 45.95 4.18
197 198 2.840974 GGAGACACAACACATCCGG 58.159 57.895 0.00 0.00 0.00 5.14
198 199 0.320374 GGAGACACAACACATCCGGA 59.680 55.000 6.61 6.61 0.00 5.14
200 201 2.271800 GAGACACAACACATCCGGATC 58.728 52.381 15.88 0.02 0.00 3.36
202 203 0.320374 ACACAACACATCCGGATCGT 59.680 50.000 15.88 12.28 0.00 3.73
204 205 1.393539 CACAACACATCCGGATCGTTC 59.606 52.381 20.87 0.00 0.00 3.95
205 206 0.645355 CAACACATCCGGATCGTTCG 59.355 55.000 20.87 10.72 0.00 3.95
207 208 1.141019 CACATCCGGATCGTTCGGT 59.859 57.895 15.88 5.39 46.82 4.69
208 209 1.141019 ACATCCGGATCGTTCGGTG 59.859 57.895 15.88 4.74 46.82 4.94
209 210 1.591594 CATCCGGATCGTTCGGTGG 60.592 63.158 15.88 0.00 46.82 4.61
210 211 1.755395 ATCCGGATCGTTCGGTGGA 60.755 57.895 12.38 8.01 46.82 4.02
225 226 1.066752 TGGAGACACAACACGTCCG 59.933 57.895 0.00 0.00 33.70 4.79
226 227 1.361271 GGAGACACAACACGTCCGA 59.639 57.895 0.00 0.00 33.70 4.55
249 250 1.793714 CGCACGGTCAAAACATATGCC 60.794 52.381 1.58 0.00 0.00 4.40
264 265 1.165270 ATGCCGGCTGTTTAAGTGTC 58.835 50.000 29.70 0.00 0.00 3.67
278 279 0.320771 AGTGTCGGTGTTGGAGATGC 60.321 55.000 0.00 0.00 0.00 3.91
285 286 1.737793 GGTGTTGGAGATGCCTTTACG 59.262 52.381 0.00 0.00 37.63 3.18
293 294 1.141053 AGATGCCTTTACGGGTGATCC 59.859 52.381 0.00 0.00 0.00 3.36
312 313 1.316651 CGCTGGGTACTACTACCTCC 58.683 60.000 0.00 0.00 42.22 4.30
382 386 3.911661 ACGTATACGAAGGGAGTATGC 57.088 47.619 30.77 0.00 43.02 3.14
455 462 1.675641 GCGGGACCAAAGAGCATGT 60.676 57.895 0.00 0.00 0.00 3.21
510 529 4.386088 CCAATCAGTGATCCAAATCTCCCT 60.386 45.833 5.98 0.00 32.75 4.20
514 537 2.512896 AGTGATCCAAATCTCCCTGCAT 59.487 45.455 0.00 0.00 32.75 3.96
533 556 3.036084 GACACGGCACCGACACTG 61.036 66.667 17.40 5.96 42.83 3.66
570 607 2.614520 CTCGCCATAGAGTCTCGAGAAA 59.385 50.000 18.55 3.52 46.59 2.52
571 608 2.355132 TCGCCATAGAGTCTCGAGAAAC 59.645 50.000 18.55 13.89 0.00 2.78
573 610 3.243234 CGCCATAGAGTCTCGAGAAACAT 60.243 47.826 18.55 6.32 0.00 2.71
581 618 7.026631 AGAGTCTCGAGAAACATCAGATTAG 57.973 40.000 18.55 0.00 0.00 1.73
582 619 6.826231 AGAGTCTCGAGAAACATCAGATTAGA 59.174 38.462 18.55 0.00 0.00 2.10
583 620 7.502226 AGAGTCTCGAGAAACATCAGATTAGAT 59.498 37.037 18.55 0.00 0.00 1.98
584 621 8.006298 AGTCTCGAGAAACATCAGATTAGATT 57.994 34.615 18.55 0.00 0.00 2.40
585 622 9.126151 AGTCTCGAGAAACATCAGATTAGATTA 57.874 33.333 18.55 0.00 0.00 1.75
586 623 9.176181 GTCTCGAGAAACATCAGATTAGATTAC 57.824 37.037 18.55 0.00 0.00 1.89
587 624 9.126151 TCTCGAGAAACATCAGATTAGATTACT 57.874 33.333 14.01 0.00 0.00 2.24
588 625 9.179552 CTCGAGAAACATCAGATTAGATTACTG 57.820 37.037 6.58 0.00 0.00 2.74
589 626 8.138074 TCGAGAAACATCAGATTAGATTACTGG 58.862 37.037 0.00 0.00 33.19 4.00
590 627 7.923344 CGAGAAACATCAGATTAGATTACTGGT 59.077 37.037 0.00 0.00 33.19 4.00
617 654 6.959639 ACAGTGGTGACAACAAAATTATCT 57.040 33.333 0.00 0.00 46.06 1.98
618 655 6.970484 ACAGTGGTGACAACAAAATTATCTC 58.030 36.000 0.00 0.00 46.06 2.75
623 660 6.924111 GGTGACAACAAAATTATCTCACCAT 58.076 36.000 8.69 0.00 43.80 3.55
626 663 9.906660 GTGACAACAAAATTATCTCACCATAAA 57.093 29.630 0.00 0.00 0.00 1.40
652 689 9.654663 AACAATCTCTAATTAAAGCGAGTTACT 57.345 29.630 0.00 0.00 0.00 2.24
764 810 2.029073 CGACCGACCACAGCACTT 59.971 61.111 0.00 0.00 0.00 3.16
778 824 2.929398 CAGCACTTCCAAACAAAACACC 59.071 45.455 0.00 0.00 0.00 4.16
783 829 5.339990 CACTTCCAAACAAAACACCACTAG 58.660 41.667 0.00 0.00 0.00 2.57
832 878 0.388263 GCTCTGCCTTTGCTGCTTTC 60.388 55.000 0.00 0.00 38.71 2.62
919 965 3.980442 TTCCGCCGCCCGCTTTATT 62.980 57.895 0.00 0.00 35.03 1.40
939 985 2.905075 TCCCTGCTGATTTACACATCG 58.095 47.619 0.00 0.00 0.00 3.84
947 993 2.279741 GATTTACACATCGGCTGCTCA 58.720 47.619 0.00 0.00 0.00 4.26
968 1014 0.665835 CTCGAGCTGCGTAGGAAGAT 59.334 55.000 0.00 0.00 41.80 2.40
1007 1053 4.758251 CATCACCCGTGCAGCCGA 62.758 66.667 4.99 0.00 0.00 5.54
1017 1063 0.317854 GTGCAGCCGAACAAAGAACC 60.318 55.000 0.00 0.00 0.00 3.62
1051 1100 0.032615 AGATGAAGTCCCGGAGCTCT 60.033 55.000 14.64 0.00 0.00 4.09
1301 1350 1.271108 TGCGTTTCTGCAGGGAATACA 60.271 47.619 15.13 8.77 40.62 2.29
1310 1359 0.676466 CAGGGAATACAGCCGTTGCA 60.676 55.000 0.00 0.00 41.13 4.08
1428 1489 4.691326 GCTGGTAAGCTAACTTATCCCT 57.309 45.455 0.00 0.00 46.60 4.20
1429 1490 5.037383 GCTGGTAAGCTAACTTATCCCTT 57.963 43.478 0.00 0.00 46.60 3.95
1431 1492 5.527951 GCTGGTAAGCTAACTTATCCCTTTC 59.472 44.000 0.00 0.00 46.60 2.62
1433 1494 5.729718 TGGTAAGCTAACTTATCCCTTTCCT 59.270 40.000 0.00 0.00 38.52 3.36
1434 1495 6.904654 TGGTAAGCTAACTTATCCCTTTCCTA 59.095 38.462 0.00 0.00 38.52 2.94
1435 1496 7.070821 TGGTAAGCTAACTTATCCCTTTCCTAG 59.929 40.741 0.00 0.00 38.52 3.02
1436 1497 6.502074 AAGCTAACTTATCCCTTTCCTAGG 57.498 41.667 0.82 0.82 37.87 3.02
1438 1499 6.327887 AAGCTAACTTATCCCTTTCCTAGGAG 59.672 42.308 12.26 0.83 39.48 3.69
1439 1500 7.810659 AAGCTAACTTATCCCTTTCCTAGGAGA 60.811 40.741 12.26 6.72 39.48 3.71
1450 1511 5.578005 TTTCCTAGGAGACGTTGTATCTG 57.422 43.478 12.26 0.00 0.00 2.90
1452 1513 3.945921 TCCTAGGAGACGTTGTATCTGTG 59.054 47.826 7.62 0.00 0.00 3.66
1454 1515 1.825474 AGGAGACGTTGTATCTGTGGG 59.175 52.381 0.00 0.00 0.00 4.61
1456 1517 0.973632 AGACGTTGTATCTGTGGGCA 59.026 50.000 0.00 0.00 0.00 5.36
1458 1519 1.463444 GACGTTGTATCTGTGGGCAAC 59.537 52.381 0.00 0.00 38.17 4.17
1462 1523 3.243234 CGTTGTATCTGTGGGCAACAAAA 60.243 43.478 0.00 0.00 40.63 2.44
1484 1549 2.254152 TAGTGAGTGGATTGGGAGCT 57.746 50.000 0.00 0.00 0.00 4.09
1542 1607 1.226575 GCATTTCTTTACCGGCCGC 60.227 57.895 22.85 0.00 0.00 6.53
1672 1759 2.369203 GCTCCTCACCTAAACTATCCCC 59.631 54.545 0.00 0.00 0.00 4.81
1778 1865 1.280421 GCAGTGGAGGAAGACAAGGAT 59.720 52.381 0.00 0.00 0.00 3.24
1806 1893 0.914644 TCAGCCCAAGGATGAGGAAG 59.085 55.000 0.00 0.00 43.58 3.46
1826 1913 2.731691 TTCAGCCCAAGACCGAGCAC 62.732 60.000 0.00 0.00 0.00 4.40
2189 2276 2.994995 ACGGACGTGCTCATCCCA 60.995 61.111 5.27 0.00 0.00 4.37
2612 2699 4.471726 CTCGGGTTCGACGTCCGG 62.472 72.222 10.58 15.56 43.54 5.14
2822 2909 4.195334 GCGGGGATGGAGGTGCAT 62.195 66.667 0.00 0.00 0.00 3.96
2900 2987 1.687612 CCACCTGGTGCTCAAGGAT 59.312 57.895 21.47 0.00 31.34 3.24
2996 3083 2.665603 GGCCGCCTCAAGAAGACT 59.334 61.111 0.71 0.00 0.00 3.24
3047 3137 0.530870 GCAGGGACGATTAGACCAGC 60.531 60.000 0.00 0.00 36.37 4.85
3048 3138 1.115467 CAGGGACGATTAGACCAGCT 58.885 55.000 0.00 0.00 36.37 4.24
3049 3139 1.067821 CAGGGACGATTAGACCAGCTC 59.932 57.143 0.00 0.00 36.37 4.09
3050 3140 0.389757 GGGACGATTAGACCAGCTCC 59.610 60.000 0.00 0.00 36.37 4.70
3063 3153 1.340114 CCAGCTCCCTTTAGTTCACCC 60.340 57.143 0.00 0.00 0.00 4.61
3123 3218 7.339721 TGGTAGCCTAGTATCATCACTAATAGC 59.660 40.741 0.00 0.00 30.77 2.97
3215 3312 4.333372 GGTGCACTGTACTACTCTACTCTC 59.667 50.000 17.98 0.00 0.00 3.20
3247 3346 0.109735 GAGGTAAAACTTGCAGCCGC 60.110 55.000 0.00 0.00 39.24 6.53
3297 3406 2.316372 ACCAGACCCACTATCCTCTCTT 59.684 50.000 0.00 0.00 0.00 2.85
3302 3411 5.659079 CAGACCCACTATCCTCTCTTTTACT 59.341 44.000 0.00 0.00 0.00 2.24
3312 3423 6.054860 TCCTCTCTTTTACTAAGCAATGCT 57.945 37.500 0.00 0.00 42.56 3.79
3318 3429 6.845302 TCTTTTACTAAGCAATGCTCATGTG 58.155 36.000 8.71 0.00 38.25 3.21
3330 3441 6.303733 GCAATGCTCATGTGTTTTTATTTTGC 59.696 34.615 0.00 0.00 0.00 3.68
3334 3445 7.928103 TGCTCATGTGTTTTTATTTTGCAATT 58.072 26.923 0.00 0.00 0.00 2.32
3377 3488 3.448686 ACAATGCTCAGCGATGTACTAC 58.551 45.455 5.38 0.00 30.42 2.73
3418 3529 8.477419 AGAGGAAAGAGAGAAGTCCATATTAG 57.523 38.462 0.00 0.00 32.19 1.73
3420 3531 9.088987 GAGGAAAGAGAGAAGTCCATATTAGAT 57.911 37.037 0.00 0.00 32.19 1.98
3431 3556 9.418045 GAAGTCCATATTAGATAGCTGAAGTTC 57.582 37.037 0.00 0.00 0.00 3.01
3444 3569 6.524101 AGCTGAAGTTCAACTTTAAAACCA 57.476 33.333 3.76 0.00 38.80 3.67
3463 3588 8.990163 AAAACCATCTACTTTAGAACCTCAAA 57.010 30.769 0.00 0.00 38.50 2.69
3464 3589 7.981102 AACCATCTACTTTAGAACCTCAAAC 57.019 36.000 0.00 0.00 38.50 2.93
3465 3590 7.317722 ACCATCTACTTTAGAACCTCAAACT 57.682 36.000 0.00 0.00 38.50 2.66
3466 3591 7.746703 ACCATCTACTTTAGAACCTCAAACTT 58.253 34.615 0.00 0.00 38.50 2.66
3467 3592 7.878644 ACCATCTACTTTAGAACCTCAAACTTC 59.121 37.037 0.00 0.00 38.50 3.01
3484 3609 5.733620 AACTTCTATAACCGGACAACTCA 57.266 39.130 9.46 0.00 0.00 3.41
3492 3617 9.504708 TCTATAACCGGACAACTCAAATTTTTA 57.495 29.630 9.46 0.00 0.00 1.52
3532 3657 1.338020 CTTGGCTCCAGTCAAACAACC 59.662 52.381 0.00 0.00 39.36 3.77
3559 3723 1.860676 TCCTTGTTTTGAGTCGGTCG 58.139 50.000 0.00 0.00 0.00 4.79
3592 3756 3.058708 CGACATCACAGTTGAAAGTGCAT 60.059 43.478 0.00 0.00 34.61 3.96
3630 3794 9.996554 TTATATTTAGGTGTGATGACAGTATGG 57.003 33.333 0.00 0.00 43.62 2.74
3706 3870 7.764141 TGAAAATCTTGTTGGAGATGATTGA 57.236 32.000 0.00 0.00 36.53 2.57
3707 3871 7.596494 TGAAAATCTTGTTGGAGATGATTGAC 58.404 34.615 0.00 0.00 36.53 3.18
3712 3876 2.239654 TGTTGGAGATGATTGACCCCTC 59.760 50.000 0.00 0.00 0.00 4.30
3716 3880 2.131023 GAGATGATTGACCCCTCCCTT 58.869 52.381 0.00 0.00 0.00 3.95
3728 3892 3.903714 ACCCCTCCCTTCATTTCAAAAAG 59.096 43.478 0.00 0.00 0.00 2.27
3736 3900 9.428097 CTCCCTTCATTTCAAAAAGATTAAAGG 57.572 33.333 0.00 0.00 0.00 3.11
3738 3902 7.661027 CCCTTCATTTCAAAAAGATTAAAGGCA 59.339 33.333 0.00 0.00 0.00 4.75
3742 3906 7.607223 TCATTTCAAAAAGATTAAAGGCATGGG 59.393 33.333 0.00 0.00 0.00 4.00
3748 3912 3.023832 AGATTAAAGGCATGGGTTTCCG 58.976 45.455 0.00 0.00 35.24 4.30
3749 3913 1.551452 TTAAAGGCATGGGTTTCCGG 58.449 50.000 0.00 0.00 35.24 5.14
3750 3914 0.968393 TAAAGGCATGGGTTTCCGGC 60.968 55.000 0.00 0.00 35.86 6.13
3773 3937 2.812011 GCTAGAAGGCTTTCGTTTTGGA 59.188 45.455 0.00 0.00 38.38 3.53
3775 3939 3.923017 AGAAGGCTTTCGTTTTGGATG 57.077 42.857 0.00 0.00 38.38 3.51
3785 3949 6.569610 GCTTTCGTTTTGGATGGATTTGAGTA 60.570 38.462 0.00 0.00 0.00 2.59
3788 3952 6.703319 TCGTTTTGGATGGATTTGAGTAGTA 58.297 36.000 0.00 0.00 0.00 1.82
3796 3960 6.258068 GGATGGATTTGAGTAGTAGGAAAACG 59.742 42.308 0.00 0.00 0.00 3.60
3821 3985 6.262720 GGTACTATTAAGAGGACTCATCGTGT 59.737 42.308 12.12 0.00 0.00 4.49
3823 3987 7.499321 ACTATTAAGAGGACTCATCGTGTAG 57.501 40.000 1.59 0.06 0.00 2.74
3828 3992 3.634448 AGAGGACTCATCGTGTAGGAATG 59.366 47.826 1.75 0.00 0.00 2.67
3839 4016 8.038351 TCATCGTGTAGGAATGATTCAAAACTA 58.962 33.333 7.56 0.00 0.00 2.24
3840 4017 8.830580 CATCGTGTAGGAATGATTCAAAACTAT 58.169 33.333 7.56 0.00 0.00 2.12
3842 4019 9.309516 TCGTGTAGGAATGATTCAAAACTATAC 57.690 33.333 7.56 6.73 0.00 1.47
3846 4023 9.391006 GTAGGAATGATTCAAAACTATACACCA 57.609 33.333 7.56 0.00 0.00 4.17
3847 4024 8.511604 AGGAATGATTCAAAACTATACACCAG 57.488 34.615 7.56 0.00 0.00 4.00
3848 4025 7.067494 AGGAATGATTCAAAACTATACACCAGC 59.933 37.037 7.56 0.00 0.00 4.85
3862 4040 1.482593 CACCAGCCTTCCTACACCTAG 59.517 57.143 0.00 0.00 0.00 3.02
3863 4041 0.466124 CCAGCCTTCCTACACCTAGC 59.534 60.000 0.00 0.00 0.00 3.42
3865 4043 1.134670 CAGCCTTCCTACACCTAGCAC 60.135 57.143 0.00 0.00 0.00 4.40
3880 4058 6.013639 ACACCTAGCACTAAATTACCTTGAGT 60.014 38.462 0.00 0.00 0.00 3.41
3889 4067 7.387948 CACTAAATTACCTTGAGTAGTGTGCTT 59.612 37.037 0.00 0.00 35.71 3.91
3895 4073 2.060326 TGAGTAGTGTGCTTGTACGC 57.940 50.000 0.00 0.00 0.00 4.42
3896 4074 0.982673 GAGTAGTGTGCTTGTACGCG 59.017 55.000 3.53 3.53 36.24 6.01
3897 4075 0.388134 AGTAGTGTGCTTGTACGCGG 60.388 55.000 12.47 0.00 36.24 6.46
3898 4076 0.387622 GTAGTGTGCTTGTACGCGGA 60.388 55.000 12.47 0.00 36.24 5.54
3899 4077 0.314618 TAGTGTGCTTGTACGCGGAA 59.685 50.000 12.47 0.00 36.24 4.30
3900 4078 0.531090 AGTGTGCTTGTACGCGGAAA 60.531 50.000 12.47 0.00 36.24 3.13
3901 4079 0.515564 GTGTGCTTGTACGCGGAAAT 59.484 50.000 12.47 0.00 0.00 2.17
3902 4080 0.793861 TGTGCTTGTACGCGGAAATC 59.206 50.000 12.47 0.00 0.00 2.17
3903 4081 0.096454 GTGCTTGTACGCGGAAATCC 59.904 55.000 12.47 0.00 0.00 3.01
3904 4082 0.320858 TGCTTGTACGCGGAAATCCA 60.321 50.000 12.47 0.00 35.14 3.41
3905 4083 0.800012 GCTTGTACGCGGAAATCCAA 59.200 50.000 12.47 0.69 35.14 3.53
3906 4084 1.465187 GCTTGTACGCGGAAATCCAAC 60.465 52.381 12.47 0.00 35.14 3.77
3907 4085 2.073816 CTTGTACGCGGAAATCCAACT 58.926 47.619 12.47 0.00 35.14 3.16
3908 4086 2.172851 TGTACGCGGAAATCCAACTT 57.827 45.000 12.47 0.00 35.14 2.66
3909 4087 1.801771 TGTACGCGGAAATCCAACTTG 59.198 47.619 12.47 0.00 35.14 3.16
3910 4088 1.129811 GTACGCGGAAATCCAACTTGG 59.870 52.381 12.47 0.74 39.43 3.61
3911 4089 0.536460 ACGCGGAAATCCAACTTGGT 60.536 50.000 12.47 0.00 39.03 3.67
3912 4090 0.109781 CGCGGAAATCCAACTTGGTG 60.110 55.000 7.72 0.00 39.03 4.17
3913 4091 0.388520 GCGGAAATCCAACTTGGTGC 60.389 55.000 7.72 1.07 39.03 5.01
3914 4092 0.243636 CGGAAATCCAACTTGGTGCC 59.756 55.000 7.72 4.75 39.03 5.01
3915 4093 0.608130 GGAAATCCAACTTGGTGCCC 59.392 55.000 7.72 2.41 39.03 5.36
3916 4094 1.337118 GAAATCCAACTTGGTGCCCA 58.663 50.000 7.72 0.00 39.03 5.36
3917 4095 1.273327 GAAATCCAACTTGGTGCCCAG 59.727 52.381 7.72 0.00 39.03 4.45
3918 4096 0.542702 AATCCAACTTGGTGCCCAGG 60.543 55.000 7.72 2.42 39.03 4.45
3919 4097 3.305516 CCAACTTGGTGCCCAGGC 61.306 66.667 0.38 0.38 33.66 4.85
3920 4098 2.203538 CAACTTGGTGCCCAGGCT 60.204 61.111 10.58 0.00 42.51 4.58
3921 4099 2.116125 AACTTGGTGCCCAGGCTC 59.884 61.111 10.58 6.18 42.51 4.70
3922 4100 2.766925 AACTTGGTGCCCAGGCTCA 61.767 57.895 10.58 5.75 42.51 4.26
3923 4101 2.085343 AACTTGGTGCCCAGGCTCAT 62.085 55.000 10.58 0.00 42.51 2.90
3924 4102 1.751927 CTTGGTGCCCAGGCTCATC 60.752 63.158 10.58 0.00 42.51 2.92
3925 4103 2.207501 CTTGGTGCCCAGGCTCATCT 62.208 60.000 10.58 0.00 42.51 2.90
3926 4104 2.124403 GGTGCCCAGGCTCATCTG 60.124 66.667 10.58 0.00 42.51 2.90
3927 4105 2.827642 GTGCCCAGGCTCATCTGC 60.828 66.667 10.58 0.00 42.51 4.26
3928 4106 3.013327 TGCCCAGGCTCATCTGCT 61.013 61.111 10.58 0.00 42.51 4.24
3929 4107 2.203181 GCCCAGGCTCATCTGCTC 60.203 66.667 0.08 0.00 38.26 4.26
3930 4108 2.509916 CCCAGGCTCATCTGCTCC 59.490 66.667 0.00 0.00 33.64 4.70
3931 4109 2.509916 CCAGGCTCATCTGCTCCC 59.490 66.667 0.00 0.00 33.64 4.30
3932 4110 2.108566 CAGGCTCATCTGCTCCCG 59.891 66.667 0.00 0.00 0.00 5.14
3933 4111 3.859414 AGGCTCATCTGCTCCCGC 61.859 66.667 0.00 0.00 0.00 6.13
3934 4112 3.859414 GGCTCATCTGCTCCCGCT 61.859 66.667 0.00 0.00 36.97 5.52
3935 4113 2.280052 GCTCATCTGCTCCCGCTC 60.280 66.667 0.00 0.00 36.97 5.03
3936 4114 3.086391 GCTCATCTGCTCCCGCTCA 62.086 63.158 0.00 0.00 36.97 4.26
3937 4115 1.067749 CTCATCTGCTCCCGCTCAG 59.932 63.158 0.00 0.00 36.97 3.35
3938 4116 1.380380 TCATCTGCTCCCGCTCAGA 60.380 57.895 0.00 0.00 42.72 3.27
3939 4117 0.972471 TCATCTGCTCCCGCTCAGAA 60.972 55.000 0.00 0.00 41.96 3.02
3940 4118 0.107993 CATCTGCTCCCGCTCAGAAA 60.108 55.000 0.00 0.00 41.96 2.52
3941 4119 0.615331 ATCTGCTCCCGCTCAGAAAA 59.385 50.000 0.00 0.00 41.96 2.29
3942 4120 0.396435 TCTGCTCCCGCTCAGAAAAA 59.604 50.000 0.00 0.00 36.50 1.94
4011 4189 6.942532 TTGGAGTGGTAGATAATTTCATGC 57.057 37.500 0.00 0.00 0.00 4.06
4012 4190 5.056480 TGGAGTGGTAGATAATTTCATGCG 58.944 41.667 0.00 0.00 0.00 4.73
4013 4191 5.057149 GGAGTGGTAGATAATTTCATGCGT 58.943 41.667 0.00 0.00 0.00 5.24
4014 4192 5.050091 GGAGTGGTAGATAATTTCATGCGTG 60.050 44.000 0.00 0.00 0.00 5.34
4015 4193 5.670485 AGTGGTAGATAATTTCATGCGTGA 58.330 37.500 3.97 3.97 0.00 4.35
4016 4194 5.755375 AGTGGTAGATAATTTCATGCGTGAG 59.245 40.000 8.93 0.00 35.39 3.51
4017 4195 5.050091 GTGGTAGATAATTTCATGCGTGAGG 60.050 44.000 8.93 0.00 35.39 3.86
4018 4196 5.057149 GGTAGATAATTTCATGCGTGAGGT 58.943 41.667 8.93 0.00 35.39 3.85
4019 4197 5.177696 GGTAGATAATTTCATGCGTGAGGTC 59.822 44.000 8.93 4.68 35.39 3.85
4020 4198 4.130118 AGATAATTTCATGCGTGAGGTCC 58.870 43.478 8.93 0.00 35.39 4.46
4021 4199 1.086696 AATTTCATGCGTGAGGTCCG 58.913 50.000 8.93 0.00 35.39 4.79
4030 4208 2.295253 CGTGAGGTCCGCTCTAAATT 57.705 50.000 0.00 0.00 0.00 1.82
4031 4209 2.618053 CGTGAGGTCCGCTCTAAATTT 58.382 47.619 0.00 0.00 0.00 1.82
4032 4210 2.603560 CGTGAGGTCCGCTCTAAATTTC 59.396 50.000 0.00 0.00 0.00 2.17
4033 4211 3.596214 GTGAGGTCCGCTCTAAATTTCA 58.404 45.455 0.00 0.00 0.00 2.69
4034 4212 4.000988 GTGAGGTCCGCTCTAAATTTCAA 58.999 43.478 0.00 0.00 0.00 2.69
4035 4213 4.000988 TGAGGTCCGCTCTAAATTTCAAC 58.999 43.478 0.00 0.00 0.00 3.18
4036 4214 4.000988 GAGGTCCGCTCTAAATTTCAACA 58.999 43.478 0.00 0.00 0.00 3.33
4037 4215 3.751698 AGGTCCGCTCTAAATTTCAACAC 59.248 43.478 0.00 0.00 0.00 3.32
4038 4216 3.500680 GGTCCGCTCTAAATTTCAACACA 59.499 43.478 0.00 0.00 0.00 3.72
4039 4217 4.156008 GGTCCGCTCTAAATTTCAACACAT 59.844 41.667 0.00 0.00 0.00 3.21
4040 4218 5.335661 GGTCCGCTCTAAATTTCAACACATT 60.336 40.000 0.00 0.00 0.00 2.71
4041 4219 6.149633 GTCCGCTCTAAATTTCAACACATTT 58.850 36.000 0.00 0.00 0.00 2.32
4042 4220 6.640907 GTCCGCTCTAAATTTCAACACATTTT 59.359 34.615 0.00 0.00 0.00 1.82
4043 4221 6.640499 TCCGCTCTAAATTTCAACACATTTTG 59.360 34.615 0.00 0.00 0.00 2.44
4044 4222 6.640499 CCGCTCTAAATTTCAACACATTTTGA 59.360 34.615 0.00 0.00 33.55 2.69
4045 4223 7.358352 CCGCTCTAAATTTCAACACATTTTGAC 60.358 37.037 0.00 0.00 35.18 3.18
4046 4224 7.167302 CGCTCTAAATTTCAACACATTTTGACA 59.833 33.333 0.00 0.00 35.18 3.58
4047 4225 8.981647 GCTCTAAATTTCAACACATTTTGACAT 58.018 29.630 0.00 0.00 35.18 3.06
4052 4230 8.617761 AATTTCAACACATTTTGACATTTTGC 57.382 26.923 0.00 0.00 33.89 3.68
4053 4231 6.732531 TTCAACACATTTTGACATTTTGCA 57.267 29.167 0.00 0.00 35.18 4.08
4054 4232 6.347270 TCAACACATTTTGACATTTTGCAG 57.653 33.333 0.00 0.00 30.29 4.41
4055 4233 4.799419 ACACATTTTGACATTTTGCAGC 57.201 36.364 0.00 0.00 0.00 5.25
4056 4234 4.444536 ACACATTTTGACATTTTGCAGCT 58.555 34.783 0.00 0.00 0.00 4.24
4057 4235 4.508861 ACACATTTTGACATTTTGCAGCTC 59.491 37.500 0.00 0.00 0.00 4.09
4058 4236 4.748102 CACATTTTGACATTTTGCAGCTCT 59.252 37.500 0.00 0.00 0.00 4.09
4059 4237 4.986659 ACATTTTGACATTTTGCAGCTCTC 59.013 37.500 0.00 0.00 0.00 3.20
4060 4238 2.975410 TTGACATTTTGCAGCTCTCG 57.025 45.000 0.00 0.00 0.00 4.04
4061 4239 1.159285 TGACATTTTGCAGCTCTCGG 58.841 50.000 0.00 0.00 0.00 4.63
4062 4240 0.179179 GACATTTTGCAGCTCTCGGC 60.179 55.000 0.00 0.00 42.19 5.54
4063 4241 0.890542 ACATTTTGCAGCTCTCGGCA 60.891 50.000 0.00 0.00 44.79 5.69
4067 4245 4.155950 TGCAGCTCTCGGCAAAAA 57.844 50.000 0.00 0.00 44.79 1.94
4089 4267 7.687941 AAAAGACAAATCGGATCATAACAGT 57.312 32.000 0.00 0.00 0.00 3.55
4090 4268 6.668541 AAGACAAATCGGATCATAACAGTG 57.331 37.500 0.00 0.00 0.00 3.66
4091 4269 4.572389 AGACAAATCGGATCATAACAGTGC 59.428 41.667 0.00 0.00 0.00 4.40
4092 4270 3.309682 ACAAATCGGATCATAACAGTGCG 59.690 43.478 0.00 0.00 0.00 5.34
4093 4271 2.890808 ATCGGATCATAACAGTGCGT 57.109 45.000 0.00 0.00 0.00 5.24
4094 4272 1.921243 TCGGATCATAACAGTGCGTG 58.079 50.000 0.00 0.00 0.00 5.34
4095 4273 1.474879 TCGGATCATAACAGTGCGTGA 59.525 47.619 0.00 0.00 0.00 4.35
4096 4274 2.094442 TCGGATCATAACAGTGCGTGAA 60.094 45.455 0.00 0.00 0.00 3.18
4097 4275 2.029244 CGGATCATAACAGTGCGTGAAC 59.971 50.000 0.00 0.00 0.00 3.18
4098 4276 3.000041 GGATCATAACAGTGCGTGAACA 59.000 45.455 0.00 0.00 0.00 3.18
4099 4277 3.062639 GGATCATAACAGTGCGTGAACAG 59.937 47.826 0.00 0.00 0.00 3.16
4100 4278 3.106242 TCATAACAGTGCGTGAACAGT 57.894 42.857 0.00 0.00 0.00 3.55
4101 4279 4.245845 TCATAACAGTGCGTGAACAGTA 57.754 40.909 0.00 0.00 0.00 2.74
4102 4280 4.234574 TCATAACAGTGCGTGAACAGTAG 58.765 43.478 0.00 0.00 0.00 2.57
4103 4281 2.882927 AACAGTGCGTGAACAGTAGA 57.117 45.000 0.00 0.00 0.00 2.59
4104 4282 2.135664 ACAGTGCGTGAACAGTAGAC 57.864 50.000 0.00 0.00 0.00 2.59
4105 4283 1.407618 ACAGTGCGTGAACAGTAGACA 59.592 47.619 0.00 0.00 0.00 3.41
4106 4284 2.035961 ACAGTGCGTGAACAGTAGACAT 59.964 45.455 0.00 0.00 0.00 3.06
4107 4285 3.059884 CAGTGCGTGAACAGTAGACATT 58.940 45.455 0.00 0.00 0.00 2.71
4108 4286 3.494626 CAGTGCGTGAACAGTAGACATTT 59.505 43.478 0.00 0.00 0.00 2.32
4109 4287 4.024893 CAGTGCGTGAACAGTAGACATTTT 60.025 41.667 0.00 0.00 0.00 1.82
4110 4288 4.574828 AGTGCGTGAACAGTAGACATTTTT 59.425 37.500 0.00 0.00 0.00 1.94
4111 4289 5.756347 AGTGCGTGAACAGTAGACATTTTTA 59.244 36.000 0.00 0.00 0.00 1.52
4112 4290 5.844396 GTGCGTGAACAGTAGACATTTTTAC 59.156 40.000 0.00 0.00 0.00 2.01
4113 4291 5.524281 TGCGTGAACAGTAGACATTTTTACA 59.476 36.000 0.00 0.00 0.00 2.41
4114 4292 6.037281 TGCGTGAACAGTAGACATTTTTACAA 59.963 34.615 0.00 0.00 0.00 2.41
4115 4293 6.908284 GCGTGAACAGTAGACATTTTTACAAA 59.092 34.615 0.00 0.00 0.00 2.83
4116 4294 7.097168 GCGTGAACAGTAGACATTTTTACAAAC 60.097 37.037 0.00 0.00 0.00 2.93
4117 4295 7.375017 CGTGAACAGTAGACATTTTTACAAACC 59.625 37.037 0.00 0.00 0.00 3.27
4118 4296 7.646526 GTGAACAGTAGACATTTTTACAAACCC 59.353 37.037 0.00 0.00 0.00 4.11
4119 4297 6.644248 ACAGTAGACATTTTTACAAACCCC 57.356 37.500 0.00 0.00 0.00 4.95
4120 4298 5.537295 ACAGTAGACATTTTTACAAACCCCC 59.463 40.000 0.00 0.00 0.00 5.40
4121 4299 5.536916 CAGTAGACATTTTTACAAACCCCCA 59.463 40.000 0.00 0.00 0.00 4.96
4122 4300 6.210584 CAGTAGACATTTTTACAAACCCCCAT 59.789 38.462 0.00 0.00 0.00 4.00
4123 4301 6.785466 AGTAGACATTTTTACAAACCCCCATT 59.215 34.615 0.00 0.00 0.00 3.16
4124 4302 6.508030 AGACATTTTTACAAACCCCCATTT 57.492 33.333 0.00 0.00 0.00 2.32
4125 4303 6.905736 AGACATTTTTACAAACCCCCATTTT 58.094 32.000 0.00 0.00 0.00 1.82
4126 4304 6.770303 AGACATTTTTACAAACCCCCATTTTG 59.230 34.615 0.00 0.00 39.44 2.44
4127 4305 6.427441 ACATTTTTACAAACCCCCATTTTGT 58.573 32.000 5.82 5.82 46.45 2.83
4128 4306 6.544197 ACATTTTTACAAACCCCCATTTTGTC 59.456 34.615 3.83 0.00 42.26 3.18
4129 4307 5.959583 TTTTACAAACCCCCATTTTGTCT 57.040 34.783 3.83 0.00 42.26 3.41
4130 4308 5.959583 TTTACAAACCCCCATTTTGTCTT 57.040 34.783 3.83 0.00 42.26 3.01
4131 4309 5.959583 TTACAAACCCCCATTTTGTCTTT 57.040 34.783 3.83 0.00 42.26 2.52
4132 4310 4.853468 ACAAACCCCCATTTTGTCTTTT 57.147 36.364 0.00 0.00 42.26 2.27
4133 4311 5.186256 ACAAACCCCCATTTTGTCTTTTT 57.814 34.783 0.00 0.00 42.26 1.94
4147 4325 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
4148 4326 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
4149 4327 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
4150 4328 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
4151 4329 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
4152 4330 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
4153 4331 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
4154 4332 1.815196 CCGAGAGCTGCTCAGATGT 59.185 57.895 29.49 10.20 44.15 3.06
4155 4333 0.248990 CCGAGAGCTGCTCAGATGTC 60.249 60.000 29.49 17.18 44.15 3.06
4156 4334 0.740149 CGAGAGCTGCTCAGATGTCT 59.260 55.000 29.49 8.69 44.15 3.41
4157 4335 1.946081 CGAGAGCTGCTCAGATGTCTA 59.054 52.381 29.49 0.00 44.15 2.59
4158 4336 2.357323 CGAGAGCTGCTCAGATGTCTAA 59.643 50.000 29.49 0.00 44.15 2.10
4159 4337 3.181492 CGAGAGCTGCTCAGATGTCTAAA 60.181 47.826 29.49 0.00 44.15 1.85
4160 4338 4.499526 CGAGAGCTGCTCAGATGTCTAAAT 60.500 45.833 29.49 5.90 44.15 1.40
4161 4339 5.278218 CGAGAGCTGCTCAGATGTCTAAATA 60.278 44.000 29.49 0.00 44.15 1.40
4162 4340 6.477053 AGAGCTGCTCAGATGTCTAAATAA 57.523 37.500 29.49 0.00 32.06 1.40
4163 4341 6.514947 AGAGCTGCTCAGATGTCTAAATAAG 58.485 40.000 29.49 0.00 32.06 1.73
4164 4342 5.055812 AGCTGCTCAGATGTCTAAATAAGC 58.944 41.667 0.00 0.00 0.00 3.09
4165 4343 5.055812 GCTGCTCAGATGTCTAAATAAGCT 58.944 41.667 0.29 0.00 0.00 3.74
4166 4344 5.050227 GCTGCTCAGATGTCTAAATAAGCTG 60.050 44.000 0.29 0.00 0.00 4.24
4167 4345 6.225981 TGCTCAGATGTCTAAATAAGCTGA 57.774 37.500 0.00 0.00 0.00 4.26
4168 4346 6.643388 TGCTCAGATGTCTAAATAAGCTGAA 58.357 36.000 0.00 0.00 31.40 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.876460 CACATTCATGTCATTGTAGAGTGGA 59.124 40.000 0.00 0.00 39.39 4.02
1 2 5.065602 CCACATTCATGTCATTGTAGAGTGG 59.934 44.000 0.00 0.00 39.39 4.00
2 3 5.065602 CCCACATTCATGTCATTGTAGAGTG 59.934 44.000 0.00 0.00 39.39 3.51
3 4 5.188434 CCCACATTCATGTCATTGTAGAGT 58.812 41.667 0.00 0.00 39.39 3.24
4 5 5.188434 ACCCACATTCATGTCATTGTAGAG 58.812 41.667 0.00 0.00 39.39 2.43
5 6 5.178096 ACCCACATTCATGTCATTGTAGA 57.822 39.130 0.00 0.00 39.39 2.59
6 7 5.008019 GCTACCCACATTCATGTCATTGTAG 59.992 44.000 0.00 0.00 39.39 2.74
7 8 4.881273 GCTACCCACATTCATGTCATTGTA 59.119 41.667 0.00 0.00 39.39 2.41
8 9 3.696051 GCTACCCACATTCATGTCATTGT 59.304 43.478 0.00 0.00 39.39 2.71
9 10 3.949754 AGCTACCCACATTCATGTCATTG 59.050 43.478 0.00 0.00 39.39 2.82
10 11 3.949754 CAGCTACCCACATTCATGTCATT 59.050 43.478 0.00 0.00 39.39 2.57
11 12 3.548770 CAGCTACCCACATTCATGTCAT 58.451 45.455 0.00 0.00 39.39 3.06
12 13 2.356022 CCAGCTACCCACATTCATGTCA 60.356 50.000 0.00 0.00 39.39 3.58
13 14 2.292267 CCAGCTACCCACATTCATGTC 58.708 52.381 0.00 0.00 39.39 3.06
14 15 1.683011 GCCAGCTACCCACATTCATGT 60.683 52.381 0.00 0.00 42.84 3.21
15 16 1.027357 GCCAGCTACCCACATTCATG 58.973 55.000 0.00 0.00 0.00 3.07
16 17 0.464373 CGCCAGCTACCCACATTCAT 60.464 55.000 0.00 0.00 0.00 2.57
17 18 1.078497 CGCCAGCTACCCACATTCA 60.078 57.895 0.00 0.00 0.00 2.57
18 19 2.472909 GCGCCAGCTACCCACATTC 61.473 63.158 0.00 0.00 41.01 2.67
19 20 2.438434 GCGCCAGCTACCCACATT 60.438 61.111 0.00 0.00 41.01 2.71
20 21 4.489771 GGCGCCAGCTACCCACAT 62.490 66.667 24.80 0.00 44.37 3.21
49 50 4.884257 TATTCCTCGCCCGCACGC 62.884 66.667 0.00 0.00 0.00 5.34
50 51 2.658593 CTATTCCTCGCCCGCACG 60.659 66.667 0.00 0.00 0.00 5.34
51 52 2.280186 CCTATTCCTCGCCCGCAC 60.280 66.667 0.00 0.00 0.00 5.34
52 53 3.546543 CCCTATTCCTCGCCCGCA 61.547 66.667 0.00 0.00 0.00 5.69
53 54 2.604299 AAACCCTATTCCTCGCCCGC 62.604 60.000 0.00 0.00 0.00 6.13
54 55 0.107361 AAAACCCTATTCCTCGCCCG 60.107 55.000 0.00 0.00 0.00 6.13
55 56 2.022195 GAAAAACCCTATTCCTCGCCC 58.978 52.381 0.00 0.00 0.00 6.13
56 57 1.669265 CGAAAAACCCTATTCCTCGCC 59.331 52.381 0.00 0.00 0.00 5.54
57 58 1.669265 CCGAAAAACCCTATTCCTCGC 59.331 52.381 0.00 0.00 0.00 5.03
58 59 2.676342 CACCGAAAAACCCTATTCCTCG 59.324 50.000 0.00 0.00 0.00 4.63
59 60 3.014623 CCACCGAAAAACCCTATTCCTC 58.985 50.000 0.00 0.00 0.00 3.71
60 61 2.882643 GCCACCGAAAAACCCTATTCCT 60.883 50.000 0.00 0.00 0.00 3.36
61 62 1.475280 GCCACCGAAAAACCCTATTCC 59.525 52.381 0.00 0.00 0.00 3.01
62 63 2.443416 AGCCACCGAAAAACCCTATTC 58.557 47.619 0.00 0.00 0.00 1.75
63 64 2.597578 AGCCACCGAAAAACCCTATT 57.402 45.000 0.00 0.00 0.00 1.73
64 65 2.092592 CCTAGCCACCGAAAAACCCTAT 60.093 50.000 0.00 0.00 0.00 2.57
65 66 1.279846 CCTAGCCACCGAAAAACCCTA 59.720 52.381 0.00 0.00 0.00 3.53
66 67 0.037734 CCTAGCCACCGAAAAACCCT 59.962 55.000 0.00 0.00 0.00 4.34
67 68 0.963856 CCCTAGCCACCGAAAAACCC 60.964 60.000 0.00 0.00 0.00 4.11
68 69 1.592400 GCCCTAGCCACCGAAAAACC 61.592 60.000 0.00 0.00 0.00 3.27
69 70 1.880894 GCCCTAGCCACCGAAAAAC 59.119 57.895 0.00 0.00 0.00 2.43
70 71 1.673009 CGCCCTAGCCACCGAAAAA 60.673 57.895 0.00 0.00 34.57 1.94
71 72 1.906105 ATCGCCCTAGCCACCGAAAA 61.906 55.000 0.00 0.00 34.57 2.29
72 73 2.306255 GATCGCCCTAGCCACCGAAA 62.306 60.000 0.00 0.00 34.57 3.46
73 74 2.762459 ATCGCCCTAGCCACCGAA 60.762 61.111 0.00 0.00 34.57 4.30
74 75 3.224324 GATCGCCCTAGCCACCGA 61.224 66.667 0.00 0.00 34.57 4.69
75 76 3.506059 CTGATCGCCCTAGCCACCG 62.506 68.421 0.00 0.00 34.57 4.94
76 77 2.423446 CTGATCGCCCTAGCCACC 59.577 66.667 0.00 0.00 34.57 4.61
77 78 2.093537 CTCCTGATCGCCCTAGCCAC 62.094 65.000 0.00 0.00 34.57 5.01
78 79 1.834378 CTCCTGATCGCCCTAGCCA 60.834 63.158 0.00 0.00 34.57 4.75
79 80 1.834822 ACTCCTGATCGCCCTAGCC 60.835 63.158 0.00 0.00 34.57 3.93
80 81 1.109920 TCACTCCTGATCGCCCTAGC 61.110 60.000 0.00 0.00 0.00 3.42
81 82 0.671251 GTCACTCCTGATCGCCCTAG 59.329 60.000 0.00 0.00 0.00 3.02
82 83 0.755698 GGTCACTCCTGATCGCCCTA 60.756 60.000 0.00 0.00 0.00 3.53
83 84 2.060980 GGTCACTCCTGATCGCCCT 61.061 63.158 0.00 0.00 0.00 5.19
84 85 2.501610 GGTCACTCCTGATCGCCC 59.498 66.667 0.00 0.00 0.00 6.13
85 86 2.105128 CGGTCACTCCTGATCGCC 59.895 66.667 0.00 0.00 43.85 5.54
88 89 1.153549 GCCACGGTCACTCCTGATC 60.154 63.158 0.00 0.00 0.00 2.92
89 90 1.892819 CTGCCACGGTCACTCCTGAT 61.893 60.000 0.00 0.00 0.00 2.90
90 91 2.523168 TGCCACGGTCACTCCTGA 60.523 61.111 0.00 0.00 0.00 3.86
91 92 2.047844 CTGCCACGGTCACTCCTG 60.048 66.667 0.00 0.00 0.00 3.86
92 93 2.524394 ACTGCCACGGTCACTCCT 60.524 61.111 0.00 0.00 0.00 3.69
93 94 2.357517 CACTGCCACGGTCACTCC 60.358 66.667 0.00 0.00 0.00 3.85
94 95 2.357517 CCACTGCCACGGTCACTC 60.358 66.667 0.00 0.00 0.00 3.51
118 119 4.875713 ATTAGGGGCTTGCGGGCG 62.876 66.667 0.00 0.00 41.87 6.13
120 121 1.886542 GATAAATTAGGGGCTTGCGGG 59.113 52.381 0.00 0.00 0.00 6.13
134 135 3.947834 CCTCCCGCAAACTGAAGATAAAT 59.052 43.478 0.00 0.00 0.00 1.40
138 139 0.984230 TCCTCCCGCAAACTGAAGAT 59.016 50.000 0.00 0.00 0.00 2.40
142 143 2.142220 AGTTCCTCCCGCAAACTGA 58.858 52.632 0.00 0.00 32.22 3.41
143 144 2.247790 CAGTTCCTCCCGCAAACTG 58.752 57.895 0.62 0.62 42.60 3.16
144 145 1.600916 GCAGTTCCTCCCGCAAACT 60.601 57.895 0.00 0.00 33.63 2.66
182 183 0.999406 CGATCCGGATGTGTTGTGTC 59.001 55.000 24.82 3.42 0.00 3.67
183 184 0.320374 ACGATCCGGATGTGTTGTGT 59.680 50.000 24.82 5.59 0.00 3.72
184 185 1.393539 GAACGATCCGGATGTGTTGTG 59.606 52.381 27.62 10.78 0.00 3.33
185 186 1.722011 GAACGATCCGGATGTGTTGT 58.278 50.000 27.62 12.16 0.00 3.32
186 187 0.645355 CGAACGATCCGGATGTGTTG 59.355 55.000 27.62 18.45 0.00 3.33
188 189 4.806571 CGAACGATCCGGATGTGT 57.193 55.556 24.82 17.35 0.00 3.72
195 196 1.226603 GTCTCCACCGAACGATCCG 60.227 63.158 0.00 0.00 0.00 4.18
196 197 0.458025 GTGTCTCCACCGAACGATCC 60.458 60.000 0.00 0.00 35.44 3.36
197 198 0.242825 TGTGTCTCCACCGAACGATC 59.757 55.000 0.00 0.00 41.09 3.69
198 199 0.677288 TTGTGTCTCCACCGAACGAT 59.323 50.000 0.00 0.00 41.09 3.73
200 201 0.528901 TGTTGTGTCTCCACCGAACG 60.529 55.000 0.00 0.00 41.09 3.95
202 203 0.528901 CGTGTTGTGTCTCCACCGAA 60.529 55.000 0.00 0.00 41.09 4.30
204 205 1.213094 GACGTGTTGTGTCTCCACCG 61.213 60.000 0.00 0.00 41.09 4.94
205 206 0.878961 GGACGTGTTGTGTCTCCACC 60.879 60.000 0.00 0.00 41.09 4.61
206 207 1.213094 CGGACGTGTTGTGTCTCCAC 61.213 60.000 0.00 0.00 42.19 4.02
207 208 1.066752 CGGACGTGTTGTGTCTCCA 59.933 57.895 0.00 0.00 36.58 3.86
208 209 0.249155 TTCGGACGTGTTGTGTCTCC 60.249 55.000 0.00 0.00 36.58 3.71
209 210 0.850856 GTTCGGACGTGTTGTGTCTC 59.149 55.000 0.00 0.00 36.58 3.36
210 211 0.529119 GGTTCGGACGTGTTGTGTCT 60.529 55.000 0.00 0.00 36.58 3.41
238 239 4.219725 ACTTAAACAGCCGGCATATGTTTT 59.780 37.500 35.59 22.67 42.82 2.43
239 240 3.761752 ACTTAAACAGCCGGCATATGTTT 59.238 39.130 33.95 33.95 46.06 2.83
249 250 0.511221 CACCGACACTTAAACAGCCG 59.489 55.000 0.00 0.00 0.00 5.52
264 265 1.737793 GTAAAGGCATCTCCAACACCG 59.262 52.381 0.00 0.00 37.29 4.94
285 286 0.757935 TAGTACCCAGCGGATCACCC 60.758 60.000 0.00 0.00 0.00 4.61
348 352 6.925610 TCGTATACGTTTTCTAAGGCTAGA 57.074 37.500 23.67 0.00 40.80 2.43
382 386 4.042398 CCGAGTCCTTGTACATCGTATTG 58.958 47.826 13.16 0.00 0.00 1.90
455 462 2.831742 CGGGCAGCGGGAGTACTA 60.832 66.667 0.00 0.00 0.00 1.82
510 529 3.353029 CGGTGCCGTGTCAATGCA 61.353 61.111 1.93 0.00 34.35 3.96
514 537 2.586635 GTGTCGGTGCCGTGTCAA 60.587 61.111 10.60 0.00 40.74 3.18
533 556 0.314578 CGAGACATTTGTGATCGCGC 60.315 55.000 0.00 0.00 30.58 6.86
570 607 9.642343 TGTACTACCAGTAATCTAATCTGATGT 57.358 33.333 0.00 0.00 31.62 3.06
573 610 9.121658 CACTGTACTACCAGTAATCTAATCTGA 57.878 37.037 0.00 0.00 43.70 3.27
581 618 5.184479 TGTCACCACTGTACTACCAGTAATC 59.816 44.000 0.00 0.00 43.70 1.75
582 619 5.081728 TGTCACCACTGTACTACCAGTAAT 58.918 41.667 0.00 0.00 43.70 1.89
583 620 4.472496 TGTCACCACTGTACTACCAGTAA 58.528 43.478 0.00 0.00 43.70 2.24
584 621 4.103013 TGTCACCACTGTACTACCAGTA 57.897 45.455 0.00 0.00 43.70 2.74
585 622 2.953453 TGTCACCACTGTACTACCAGT 58.047 47.619 0.00 0.00 46.40 4.00
586 623 3.069016 TGTTGTCACCACTGTACTACCAG 59.931 47.826 0.00 0.00 38.45 4.00
587 624 3.032459 TGTTGTCACCACTGTACTACCA 58.968 45.455 0.00 0.00 0.00 3.25
588 625 3.738830 TGTTGTCACCACTGTACTACC 57.261 47.619 0.00 0.00 0.00 3.18
589 626 6.613755 ATTTTGTTGTCACCACTGTACTAC 57.386 37.500 0.00 0.00 0.00 2.73
590 627 8.911918 ATAATTTTGTTGTCACCACTGTACTA 57.088 30.769 0.00 0.00 0.00 1.82
591 628 7.719633 AGATAATTTTGTTGTCACCACTGTACT 59.280 33.333 0.00 0.00 0.00 2.73
626 663 9.654663 AGTAACTCGCTTTAATTAGAGATTGTT 57.345 29.630 7.19 9.21 34.98 2.83
645 682 7.600065 TCAGACACTGGTTATTACAGTAACTC 58.400 38.462 0.00 0.00 46.76 3.01
651 688 5.237815 TGCTTCAGACACTGGTTATTACAG 58.762 41.667 0.00 0.00 41.64 2.74
652 689 5.222079 TGCTTCAGACACTGGTTATTACA 57.778 39.130 0.00 0.00 31.51 2.41
661 698 2.675056 GCCGCTGCTTCAGACACTG 61.675 63.158 0.00 0.00 32.44 3.66
764 810 4.399934 GGAACTAGTGGTGTTTTGTTTGGA 59.600 41.667 0.00 0.00 0.00 3.53
778 824 0.035056 CTGGGGCTTGGGAACTAGTG 60.035 60.000 0.00 0.00 35.48 2.74
832 878 2.202676 GGACGGAAGAGCAGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
919 965 2.419990 CCGATGTGTAAATCAGCAGGGA 60.420 50.000 0.00 0.00 0.00 4.20
963 1009 1.680249 GCTGGGACCTCCACAATCTTC 60.680 57.143 0.00 0.00 41.46 2.87
968 1014 4.329545 GCGCTGGGACCTCCACAA 62.330 66.667 0.00 0.00 41.46 3.33
1007 1053 2.224450 CCGGGAGTAGTGGTTCTTTGTT 60.224 50.000 0.00 0.00 0.00 2.83
1301 1350 1.078848 GATGGTCTCTGCAACGGCT 60.079 57.895 0.00 0.00 41.91 5.52
1310 1359 2.907892 TCCTCCACTTTGATGGTCTCT 58.092 47.619 0.00 0.00 40.95 3.10
1398 1459 1.218316 GCTTACCAGCTACTGCGGT 59.782 57.895 2.42 2.42 43.51 5.68
1427 1488 5.125739 ACAGATACAACGTCTCCTAGGAAAG 59.874 44.000 13.77 9.40 0.00 2.62
1428 1489 5.014858 ACAGATACAACGTCTCCTAGGAAA 58.985 41.667 13.77 0.00 0.00 3.13
1429 1490 4.398358 CACAGATACAACGTCTCCTAGGAA 59.602 45.833 13.77 1.11 0.00 3.36
1431 1492 3.066900 CCACAGATACAACGTCTCCTAGG 59.933 52.174 0.82 0.82 0.00 3.02
1433 1494 3.021695 CCCACAGATACAACGTCTCCTA 58.978 50.000 0.00 0.00 0.00 2.94
1434 1495 1.825474 CCCACAGATACAACGTCTCCT 59.175 52.381 0.00 0.00 0.00 3.69
1435 1496 1.739371 GCCCACAGATACAACGTCTCC 60.739 57.143 0.00 0.00 0.00 3.71
1436 1497 1.067142 TGCCCACAGATACAACGTCTC 60.067 52.381 0.00 0.00 0.00 3.36
1438 1499 1.463444 GTTGCCCACAGATACAACGTC 59.537 52.381 0.00 0.00 33.78 4.34
1439 1500 1.202710 TGTTGCCCACAGATACAACGT 60.203 47.619 0.00 0.00 44.13 3.99
1440 1501 1.518325 TGTTGCCCACAGATACAACG 58.482 50.000 0.00 0.00 44.13 4.10
1441 1502 4.314740 TTTTGTTGCCCACAGATACAAC 57.685 40.909 0.00 0.00 42.10 3.32
1442 1503 5.543507 ATTTTTGTTGCCCACAGATACAA 57.456 34.783 0.00 0.00 36.48 2.41
1443 1504 5.543507 AATTTTTGTTGCCCACAGATACA 57.456 34.783 0.00 0.00 36.48 2.29
1446 1507 5.304101 TCACTAATTTTTGTTGCCCACAGAT 59.696 36.000 0.00 0.00 36.48 2.90
1450 1511 4.744631 CACTCACTAATTTTTGTTGCCCAC 59.255 41.667 0.00 0.00 0.00 4.61
1452 1513 4.038642 TCCACTCACTAATTTTTGTTGCCC 59.961 41.667 0.00 0.00 0.00 5.36
1454 1515 6.146021 CCAATCCACTCACTAATTTTTGTTGC 59.854 38.462 0.00 0.00 0.00 4.17
1456 1517 6.553100 TCCCAATCCACTCACTAATTTTTGTT 59.447 34.615 0.00 0.00 0.00 2.83
1458 1519 6.588719 TCCCAATCCACTCACTAATTTTTG 57.411 37.500 0.00 0.00 0.00 2.44
1462 1523 3.525199 AGCTCCCAATCCACTCACTAATT 59.475 43.478 0.00 0.00 0.00 1.40
1699 1786 3.118371 ACCACCCTCTTCACCGAATTATC 60.118 47.826 0.00 0.00 0.00 1.75
1778 1865 1.681666 CTTGGGCTGAGCTTCCTCA 59.318 57.895 3.72 0.00 45.54 3.86
1806 1893 2.035442 GCTCGGTCTTGGGCTGAAC 61.035 63.158 0.00 0.00 0.00 3.18
1988 2075 0.191064 AGGGTCTGGTCTTCCACTCA 59.809 55.000 0.00 0.00 39.03 3.41
2519 2606 3.133014 CGCCGGGAGATGATCAGT 58.867 61.111 2.18 0.00 0.00 3.41
2588 2675 4.689549 TCGAACCCGAGGCTCCCA 62.690 66.667 9.32 0.00 40.30 4.37
2822 2909 0.604578 GCACCACGTACTCCAGGTAA 59.395 55.000 0.00 0.00 32.01 2.85
2996 3083 1.003355 CTTGAGCGCCTGGAGGAAA 60.003 57.895 2.29 0.00 37.39 3.13
3030 3117 1.404843 GAGCTGGTCTAATCGTCCCT 58.595 55.000 0.00 0.00 0.00 4.20
3047 3137 1.900486 ACGAGGGTGAACTAAAGGGAG 59.100 52.381 0.00 0.00 0.00 4.30
3048 3138 1.897802 GACGAGGGTGAACTAAAGGGA 59.102 52.381 0.00 0.00 0.00 4.20
3049 3139 1.403780 CGACGAGGGTGAACTAAAGGG 60.404 57.143 0.00 0.00 0.00 3.95
3050 3140 1.992170 CGACGAGGGTGAACTAAAGG 58.008 55.000 0.00 0.00 0.00 3.11
3063 3153 1.946156 CCACGATGATGGCGACGAG 60.946 63.158 0.00 0.00 31.52 4.18
3123 3218 3.063997 GTCCTCTGCATCCATTTTGTACG 59.936 47.826 0.00 0.00 0.00 3.67
3226 3325 1.069227 CGGCTGCAAGTTTTACCTCAC 60.069 52.381 0.50 0.00 35.30 3.51
3247 3346 2.143122 AGTGTGTGCATCCTGTTAACG 58.857 47.619 0.26 0.00 0.00 3.18
3297 3406 6.573664 AACACATGAGCATTGCTTAGTAAA 57.426 33.333 13.35 0.00 39.88 2.01
3302 3411 8.830201 AAATAAAAACACATGAGCATTGCTTA 57.170 26.923 13.35 9.33 39.88 3.09
3312 3423 9.875675 GCTAAATTGCAAAATAAAAACACATGA 57.124 25.926 1.71 0.00 0.00 3.07
3330 3441 8.722342 ACGTGTACTACAAAATTGCTAAATTG 57.278 30.769 0.00 0.00 36.11 2.32
3334 3445 7.943413 TGTACGTGTACTACAAAATTGCTAA 57.057 32.000 11.14 0.00 37.00 3.09
3377 3488 2.565834 TCCTCTTTCTAGGGAAACGGTG 59.434 50.000 0.00 0.00 36.63 4.94
3418 3529 8.349983 TGGTTTTAAAGTTGAACTTCAGCTATC 58.650 33.333 11.44 0.54 36.93 2.08
3420 3531 7.633193 TGGTTTTAAAGTTGAACTTCAGCTA 57.367 32.000 11.44 0.00 36.93 3.32
3462 3587 5.733620 TGAGTTGTCCGGTTATAGAAGTT 57.266 39.130 0.00 0.00 0.00 2.66
3463 3588 5.733620 TTGAGTTGTCCGGTTATAGAAGT 57.266 39.130 0.00 0.00 0.00 3.01
3464 3589 7.611213 AATTTGAGTTGTCCGGTTATAGAAG 57.389 36.000 0.00 0.00 0.00 2.85
3465 3590 7.989416 AAATTTGAGTTGTCCGGTTATAGAA 57.011 32.000 0.00 0.00 0.00 2.10
3466 3591 7.989416 AAAATTTGAGTTGTCCGGTTATAGA 57.011 32.000 0.00 0.00 0.00 1.98
3492 3617 5.757808 CCAAGATTGATTTTTGTCCGGTTTT 59.242 36.000 0.00 0.00 0.00 2.43
3510 3635 2.887152 GTTGTTTGACTGGAGCCAAGAT 59.113 45.455 0.00 0.00 0.00 2.40
3532 3657 4.537015 GACTCAAAACAAGGATGAAACCG 58.463 43.478 0.00 0.00 34.73 4.44
3559 3723 5.108385 ACTGTGATGTCGATTTGGTTTTC 57.892 39.130 0.00 0.00 0.00 2.29
3572 3736 3.633525 ACATGCACTTTCAACTGTGATGT 59.366 39.130 0.00 0.00 36.38 3.06
3696 3860 1.813102 AGGGAGGGGTCAATCATCTC 58.187 55.000 0.00 0.00 0.00 2.75
3697 3861 2.131023 GAAGGGAGGGGTCAATCATCT 58.869 52.381 0.00 0.00 0.00 2.90
3700 3864 1.985622 ATGAAGGGAGGGGTCAATCA 58.014 50.000 0.00 0.00 0.00 2.57
3701 3865 3.291584 GAAATGAAGGGAGGGGTCAATC 58.708 50.000 0.00 0.00 0.00 2.67
3702 3866 2.654385 TGAAATGAAGGGAGGGGTCAAT 59.346 45.455 0.00 0.00 0.00 2.57
3703 3867 2.069775 TGAAATGAAGGGAGGGGTCAA 58.930 47.619 0.00 0.00 0.00 3.18
3704 3868 1.753903 TGAAATGAAGGGAGGGGTCA 58.246 50.000 0.00 0.00 0.00 4.02
3705 3869 2.899303 TTGAAATGAAGGGAGGGGTC 57.101 50.000 0.00 0.00 0.00 4.46
3706 3870 3.628832 TTTTGAAATGAAGGGAGGGGT 57.371 42.857 0.00 0.00 0.00 4.95
3707 3871 4.159557 TCTTTTTGAAATGAAGGGAGGGG 58.840 43.478 0.00 0.00 0.00 4.79
3712 3876 7.661027 TGCCTTTAATCTTTTTGAAATGAAGGG 59.339 33.333 0.00 0.00 34.66 3.95
3716 3880 7.607223 CCCATGCCTTTAATCTTTTTGAAATGA 59.393 33.333 0.00 0.00 0.00 2.57
3728 3892 2.100749 CCGGAAACCCATGCCTTTAATC 59.899 50.000 0.00 0.00 0.00 1.75
3738 3902 3.400599 CTAGCCGCCGGAAACCCAT 62.401 63.158 7.68 0.00 0.00 4.00
3742 3906 1.814169 CCTTCTAGCCGCCGGAAAC 60.814 63.158 7.68 0.00 0.00 2.78
3748 3912 2.174319 CGAAAGCCTTCTAGCCGCC 61.174 63.158 0.00 0.00 0.00 6.13
3749 3913 1.019805 AACGAAAGCCTTCTAGCCGC 61.020 55.000 0.00 0.00 0.00 6.53
3750 3914 1.439679 AAACGAAAGCCTTCTAGCCG 58.560 50.000 0.00 0.00 0.00 5.52
3773 3937 6.113411 CCGTTTTCCTACTACTCAAATCCAT 58.887 40.000 0.00 0.00 0.00 3.41
3775 3939 5.485620 ACCGTTTTCCTACTACTCAAATCC 58.514 41.667 0.00 0.00 0.00 3.01
3785 3949 7.836183 TCCTCTTAATAGTACCGTTTTCCTACT 59.164 37.037 0.00 0.00 0.00 2.57
3788 3952 6.666980 AGTCCTCTTAATAGTACCGTTTTCCT 59.333 38.462 0.00 0.00 0.00 3.36
3796 3960 6.262720 ACACGATGAGTCCTCTTAATAGTACC 59.737 42.308 0.00 0.00 0.00 3.34
3821 3985 9.613428 CTGGTGTATAGTTTTGAATCATTCCTA 57.387 33.333 0.00 0.00 0.00 2.94
3823 3987 7.196331 GCTGGTGTATAGTTTTGAATCATTCC 58.804 38.462 0.00 0.00 0.00 3.01
3828 3992 6.183360 GGAAGGCTGGTGTATAGTTTTGAATC 60.183 42.308 0.00 0.00 0.00 2.52
3839 4016 1.838077 GGTGTAGGAAGGCTGGTGTAT 59.162 52.381 0.00 0.00 0.00 2.29
3840 4017 1.203262 AGGTGTAGGAAGGCTGGTGTA 60.203 52.381 0.00 0.00 0.00 2.90
3841 4018 0.473886 AGGTGTAGGAAGGCTGGTGT 60.474 55.000 0.00 0.00 0.00 4.16
3842 4019 1.482593 CTAGGTGTAGGAAGGCTGGTG 59.517 57.143 0.00 0.00 0.00 4.17
3846 4023 1.196012 GTGCTAGGTGTAGGAAGGCT 58.804 55.000 0.00 0.00 0.00 4.58
3847 4024 1.196012 AGTGCTAGGTGTAGGAAGGC 58.804 55.000 0.00 0.00 0.00 4.35
3848 4025 5.615925 ATTTAGTGCTAGGTGTAGGAAGG 57.384 43.478 0.00 0.00 0.00 3.46
3862 4040 6.402226 GCACACTACTCAAGGTAATTTAGTGC 60.402 42.308 8.79 0.00 39.16 4.40
3863 4041 6.874134 AGCACACTACTCAAGGTAATTTAGTG 59.126 38.462 7.72 7.72 36.28 2.74
3865 4043 7.387948 ACAAGCACACTACTCAAGGTAATTTAG 59.612 37.037 0.00 0.00 0.00 1.85
3880 4058 0.314618 TTCCGCGTACAAGCACACTA 59.685 50.000 4.92 0.00 36.85 2.74
3889 4067 1.801771 CAAGTTGGATTTCCGCGTACA 59.198 47.619 4.92 0.00 39.43 2.90
3895 4073 0.243636 GGCACCAAGTTGGATTTCCG 59.756 55.000 28.80 9.79 40.96 4.30
3910 4088 2.827642 GCAGATGAGCCTGGGCAC 60.828 66.667 14.39 8.23 44.88 5.01
3911 4089 3.013327 AGCAGATGAGCCTGGGCA 61.013 61.111 14.39 0.00 44.88 5.36
3912 4090 2.203181 GAGCAGATGAGCCTGGGC 60.203 66.667 3.00 3.00 42.33 5.36
3913 4091 2.509916 GGAGCAGATGAGCCTGGG 59.490 66.667 0.00 0.00 34.82 4.45
3914 4092 2.509916 GGGAGCAGATGAGCCTGG 59.490 66.667 0.00 0.00 34.82 4.45
3915 4093 2.108566 CGGGAGCAGATGAGCCTG 59.891 66.667 0.00 0.00 37.23 4.85
3985 4163 8.250332 GCATGAAATTATCTACCACTCCAAAAA 58.750 33.333 0.00 0.00 0.00 1.94
3986 4164 7.415095 CGCATGAAATTATCTACCACTCCAAAA 60.415 37.037 0.00 0.00 0.00 2.44
3987 4165 6.038161 CGCATGAAATTATCTACCACTCCAAA 59.962 38.462 0.00 0.00 0.00 3.28
3988 4166 5.527214 CGCATGAAATTATCTACCACTCCAA 59.473 40.000 0.00 0.00 0.00 3.53
3989 4167 5.056480 CGCATGAAATTATCTACCACTCCA 58.944 41.667 0.00 0.00 0.00 3.86
3990 4168 5.050091 CACGCATGAAATTATCTACCACTCC 60.050 44.000 0.00 0.00 0.00 3.85
3991 4169 5.753438 TCACGCATGAAATTATCTACCACTC 59.247 40.000 0.00 0.00 0.00 3.51
3992 4170 5.670485 TCACGCATGAAATTATCTACCACT 58.330 37.500 0.00 0.00 0.00 4.00
3993 4171 5.050091 CCTCACGCATGAAATTATCTACCAC 60.050 44.000 0.00 0.00 33.30 4.16
3994 4172 5.056480 CCTCACGCATGAAATTATCTACCA 58.944 41.667 0.00 0.00 33.30 3.25
3995 4173 5.057149 ACCTCACGCATGAAATTATCTACC 58.943 41.667 0.00 0.00 33.30 3.18
3996 4174 5.177696 GGACCTCACGCATGAAATTATCTAC 59.822 44.000 0.00 0.00 33.30 2.59
3997 4175 5.297547 GGACCTCACGCATGAAATTATCTA 58.702 41.667 0.00 0.00 33.30 1.98
3998 4176 4.130118 GGACCTCACGCATGAAATTATCT 58.870 43.478 0.00 0.00 33.30 1.98
3999 4177 3.059597 CGGACCTCACGCATGAAATTATC 60.060 47.826 0.00 0.00 33.30 1.75
4000 4178 2.872245 CGGACCTCACGCATGAAATTAT 59.128 45.455 0.00 0.00 33.30 1.28
4001 4179 2.276201 CGGACCTCACGCATGAAATTA 58.724 47.619 0.00 0.00 33.30 1.40
4002 4180 1.086696 CGGACCTCACGCATGAAATT 58.913 50.000 0.00 0.00 33.30 1.82
4003 4181 2.767536 CGGACCTCACGCATGAAAT 58.232 52.632 0.00 0.00 33.30 2.17
4004 4182 4.277239 CGGACCTCACGCATGAAA 57.723 55.556 0.00 0.00 33.30 2.69
4011 4189 2.295253 AATTTAGAGCGGACCTCACG 57.705 50.000 0.00 0.00 43.31 4.35
4012 4190 3.596214 TGAAATTTAGAGCGGACCTCAC 58.404 45.455 0.00 0.00 43.31 3.51
4013 4191 3.973206 TGAAATTTAGAGCGGACCTCA 57.027 42.857 0.00 0.00 43.31 3.86
4014 4192 4.000988 TGTTGAAATTTAGAGCGGACCTC 58.999 43.478 0.00 0.00 41.07 3.85
4015 4193 3.751698 GTGTTGAAATTTAGAGCGGACCT 59.248 43.478 0.00 0.00 0.00 3.85
4016 4194 3.500680 TGTGTTGAAATTTAGAGCGGACC 59.499 43.478 0.00 0.00 0.00 4.46
4017 4195 4.742438 TGTGTTGAAATTTAGAGCGGAC 57.258 40.909 0.00 0.00 0.00 4.79
4018 4196 5.957842 AATGTGTTGAAATTTAGAGCGGA 57.042 34.783 0.00 0.00 0.00 5.54
4019 4197 6.640499 TCAAAATGTGTTGAAATTTAGAGCGG 59.360 34.615 0.00 0.00 34.59 5.52
4020 4198 7.167302 TGTCAAAATGTGTTGAAATTTAGAGCG 59.833 33.333 0.00 0.00 39.18 5.03
4021 4199 8.351495 TGTCAAAATGTGTTGAAATTTAGAGC 57.649 30.769 0.00 0.00 39.18 4.09
4027 4205 8.242053 TGCAAAATGTCAAAATGTGTTGAAATT 58.758 25.926 0.00 0.00 44.04 1.82
4028 4206 7.759465 TGCAAAATGTCAAAATGTGTTGAAAT 58.241 26.923 0.00 0.00 39.18 2.17
4029 4207 7.137490 TGCAAAATGTCAAAATGTGTTGAAA 57.863 28.000 0.00 0.00 39.18 2.69
4030 4208 6.675002 GCTGCAAAATGTCAAAATGTGTTGAA 60.675 34.615 0.00 0.00 39.18 2.69
4031 4209 5.220624 GCTGCAAAATGTCAAAATGTGTTGA 60.221 36.000 0.00 0.00 35.14 3.18
4032 4210 4.965158 GCTGCAAAATGTCAAAATGTGTTG 59.035 37.500 0.00 0.00 0.00 3.33
4033 4211 4.877251 AGCTGCAAAATGTCAAAATGTGTT 59.123 33.333 1.02 0.00 0.00 3.32
4034 4212 4.444536 AGCTGCAAAATGTCAAAATGTGT 58.555 34.783 1.02 0.00 0.00 3.72
4035 4213 4.748102 AGAGCTGCAAAATGTCAAAATGTG 59.252 37.500 1.02 0.00 0.00 3.21
4036 4214 4.952460 AGAGCTGCAAAATGTCAAAATGT 58.048 34.783 1.02 0.00 0.00 2.71
4037 4215 4.089493 CGAGAGCTGCAAAATGTCAAAATG 59.911 41.667 1.02 0.00 0.00 2.32
4038 4216 4.232221 CGAGAGCTGCAAAATGTCAAAAT 58.768 39.130 1.02 0.00 0.00 1.82
4039 4217 3.550639 CCGAGAGCTGCAAAATGTCAAAA 60.551 43.478 1.02 0.00 0.00 2.44
4040 4218 2.030893 CCGAGAGCTGCAAAATGTCAAA 60.031 45.455 1.02 0.00 0.00 2.69
4041 4219 1.536766 CCGAGAGCTGCAAAATGTCAA 59.463 47.619 1.02 0.00 0.00 3.18
4042 4220 1.159285 CCGAGAGCTGCAAAATGTCA 58.841 50.000 1.02 0.00 0.00 3.58
4043 4221 0.179179 GCCGAGAGCTGCAAAATGTC 60.179 55.000 1.02 0.00 38.99 3.06
4044 4222 0.890542 TGCCGAGAGCTGCAAAATGT 60.891 50.000 1.02 0.00 44.23 2.71
4045 4223 0.241749 TTGCCGAGAGCTGCAAAATG 59.758 50.000 6.72 0.00 43.94 2.32
4046 4224 2.644887 TTGCCGAGAGCTGCAAAAT 58.355 47.368 6.72 0.00 43.94 1.82
4047 4225 4.155950 TTGCCGAGAGCTGCAAAA 57.844 50.000 6.72 0.00 43.94 2.44
4049 4227 2.413677 TTTTTGCCGAGAGCTGCAA 58.586 47.368 5.16 5.16 45.12 4.08
4050 4228 4.155950 TTTTTGCCGAGAGCTGCA 57.844 50.000 1.02 0.00 44.23 4.41
4064 4242 8.023128 CACTGTTATGATCCGATTTGTCTTTTT 58.977 33.333 0.00 0.00 0.00 1.94
4065 4243 7.530010 CACTGTTATGATCCGATTTGTCTTTT 58.470 34.615 0.00 0.00 0.00 2.27
4066 4244 6.403636 GCACTGTTATGATCCGATTTGTCTTT 60.404 38.462 0.00 0.00 0.00 2.52
4067 4245 5.065218 GCACTGTTATGATCCGATTTGTCTT 59.935 40.000 0.00 0.00 0.00 3.01
4068 4246 4.572389 GCACTGTTATGATCCGATTTGTCT 59.428 41.667 0.00 0.00 0.00 3.41
4069 4247 4.550831 CGCACTGTTATGATCCGATTTGTC 60.551 45.833 0.00 0.00 0.00 3.18
4070 4248 3.309682 CGCACTGTTATGATCCGATTTGT 59.690 43.478 0.00 0.00 0.00 2.83
4071 4249 3.309682 ACGCACTGTTATGATCCGATTTG 59.690 43.478 0.00 0.00 0.00 2.32
4072 4250 3.309682 CACGCACTGTTATGATCCGATTT 59.690 43.478 0.00 0.00 0.00 2.17
4073 4251 2.866156 CACGCACTGTTATGATCCGATT 59.134 45.455 0.00 0.00 0.00 3.34
4074 4252 2.100749 TCACGCACTGTTATGATCCGAT 59.899 45.455 0.00 0.00 0.00 4.18
4075 4253 1.474879 TCACGCACTGTTATGATCCGA 59.525 47.619 0.00 0.00 0.00 4.55
4076 4254 1.921243 TCACGCACTGTTATGATCCG 58.079 50.000 0.00 0.00 0.00 4.18
4077 4255 3.000041 TGTTCACGCACTGTTATGATCC 59.000 45.455 0.00 0.00 0.00 3.36
4078 4256 3.679980 ACTGTTCACGCACTGTTATGATC 59.320 43.478 0.00 0.00 0.00 2.92
4079 4257 3.664107 ACTGTTCACGCACTGTTATGAT 58.336 40.909 0.00 0.00 0.00 2.45
4080 4258 3.106242 ACTGTTCACGCACTGTTATGA 57.894 42.857 0.00 0.00 0.00 2.15
4081 4259 4.090066 GTCTACTGTTCACGCACTGTTATG 59.910 45.833 0.00 0.00 31.81 1.90
4082 4260 4.235360 GTCTACTGTTCACGCACTGTTAT 58.765 43.478 0.00 0.00 31.81 1.89
4083 4261 3.067040 TGTCTACTGTTCACGCACTGTTA 59.933 43.478 0.00 0.00 31.81 2.41
4084 4262 2.159156 TGTCTACTGTTCACGCACTGTT 60.159 45.455 0.00 0.00 31.81 3.16
4085 4263 1.407618 TGTCTACTGTTCACGCACTGT 59.592 47.619 0.00 0.00 33.75 3.55
4086 4264 2.134201 TGTCTACTGTTCACGCACTG 57.866 50.000 0.00 0.00 0.00 3.66
4087 4265 3.386768 AATGTCTACTGTTCACGCACT 57.613 42.857 0.00 0.00 0.00 4.40
4088 4266 4.468095 AAAATGTCTACTGTTCACGCAC 57.532 40.909 0.00 0.00 0.00 5.34
4089 4267 5.524281 TGTAAAAATGTCTACTGTTCACGCA 59.476 36.000 0.00 0.00 0.00 5.24
4090 4268 5.981174 TGTAAAAATGTCTACTGTTCACGC 58.019 37.500 0.00 0.00 0.00 5.34
4091 4269 7.375017 GGTTTGTAAAAATGTCTACTGTTCACG 59.625 37.037 0.00 0.00 0.00 4.35
4092 4270 7.646526 GGGTTTGTAAAAATGTCTACTGTTCAC 59.353 37.037 0.00 0.00 0.00 3.18
4093 4271 7.201839 GGGGTTTGTAAAAATGTCTACTGTTCA 60.202 37.037 0.00 0.00 0.00 3.18
4094 4272 7.143340 GGGGTTTGTAAAAATGTCTACTGTTC 58.857 38.462 0.00 0.00 0.00 3.18
4095 4273 6.041182 GGGGGTTTGTAAAAATGTCTACTGTT 59.959 38.462 0.00 0.00 0.00 3.16
4096 4274 5.537295 GGGGGTTTGTAAAAATGTCTACTGT 59.463 40.000 0.00 0.00 0.00 3.55
4097 4275 5.536916 TGGGGGTTTGTAAAAATGTCTACTG 59.463 40.000 0.00 0.00 0.00 2.74
4098 4276 5.707495 TGGGGGTTTGTAAAAATGTCTACT 58.293 37.500 0.00 0.00 0.00 2.57
4099 4277 6.599356 ATGGGGGTTTGTAAAAATGTCTAC 57.401 37.500 0.00 0.00 0.00 2.59
4100 4278 7.619512 AAATGGGGGTTTGTAAAAATGTCTA 57.380 32.000 0.00 0.00 0.00 2.59
4101 4279 6.508030 AAATGGGGGTTTGTAAAAATGTCT 57.492 33.333 0.00 0.00 0.00 3.41
4102 4280 6.544197 ACAAAATGGGGGTTTGTAAAAATGTC 59.456 34.615 0.86 0.00 45.11 3.06
4103 4281 6.427441 ACAAAATGGGGGTTTGTAAAAATGT 58.573 32.000 0.86 0.00 45.11 2.71
4104 4282 6.770303 AGACAAAATGGGGGTTTGTAAAAATG 59.230 34.615 2.73 0.00 46.50 2.32
4105 4283 6.905736 AGACAAAATGGGGGTTTGTAAAAAT 58.094 32.000 2.73 0.00 46.50 1.82
4106 4284 6.314899 AGACAAAATGGGGGTTTGTAAAAA 57.685 33.333 2.73 0.00 46.50 1.94
4107 4285 5.959583 AGACAAAATGGGGGTTTGTAAAA 57.040 34.783 2.73 0.00 46.50 1.52
4108 4286 5.959583 AAGACAAAATGGGGGTTTGTAAA 57.040 34.783 2.73 0.00 46.50 2.01
4109 4287 5.959583 AAAGACAAAATGGGGGTTTGTAA 57.040 34.783 2.73 0.00 46.50 2.41
4110 4288 5.959583 AAAAGACAAAATGGGGGTTTGTA 57.040 34.783 2.73 0.00 46.50 2.41
4130 4308 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
4131 4309 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
4132 4310 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
4133 4311 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
4134 4312 2.056815 ATCTGAGCAGCTCTCGGCA 61.057 57.895 23.15 2.15 45.76 5.69
4135 4313 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
4137 4315 0.740149 AGACATCTGAGCAGCTCTCG 59.260 55.000 23.15 13.93 44.86 4.04
4138 4316 4.383850 TTTAGACATCTGAGCAGCTCTC 57.616 45.455 23.15 11.79 42.23 3.20
4139 4317 6.477053 TTATTTAGACATCTGAGCAGCTCT 57.523 37.500 23.15 2.04 0.00 4.09
4140 4318 5.177327 GCTTATTTAGACATCTGAGCAGCTC 59.823 44.000 16.21 16.21 0.00 4.09
4141 4319 5.055812 GCTTATTTAGACATCTGAGCAGCT 58.944 41.667 0.00 0.00 0.00 4.24
4142 4320 5.050227 CAGCTTATTTAGACATCTGAGCAGC 60.050 44.000 0.00 0.00 0.00 5.25
4143 4321 6.279123 TCAGCTTATTTAGACATCTGAGCAG 58.721 40.000 0.00 0.00 0.00 4.24
4144 4322 6.225981 TCAGCTTATTTAGACATCTGAGCA 57.774 37.500 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.