Multiple sequence alignment - TraesCS7B01G132900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G132900 chr7B 100.000 6783 0 0 1 6783 161659429 161652647 0.000000e+00 12526.0
1 TraesCS7B01G132900 chr7B 99.117 453 3 1 2234 2685 161656747 161656295 0.000000e+00 813.0
2 TraesCS7B01G132900 chr7B 99.117 453 3 1 2683 3135 161657196 161656745 0.000000e+00 813.0
3 TraesCS7B01G132900 chr7B 96.104 77 3 0 5832 5908 160914643 160914719 7.140000e-25 126.0
4 TraesCS7B01G132900 chr7B 96.104 77 3 0 5832 5908 378475031 378474955 7.140000e-25 126.0
5 TraesCS7B01G132900 chr7B 82.955 88 11 4 605 689 638078395 638078309 7.290000e-10 76.8
6 TraesCS7B01G132900 chr7B 87.037 54 5 2 605 657 1379871 1379923 7.350000e-05 60.2
7 TraesCS7B01G132900 chr7D 97.550 3143 59 9 2685 5821 197306863 197303733 0.000000e+00 5361.0
8 TraesCS7B01G132900 chr7D 96.352 1809 49 14 888 2685 197308214 197306412 0.000000e+00 2959.0
9 TraesCS7B01G132900 chr7D 95.028 885 36 6 5905 6783 197302851 197301969 0.000000e+00 1384.0
10 TraesCS7B01G132900 chr7D 87.838 740 56 15 1 711 197342747 197342013 0.000000e+00 837.0
11 TraesCS7B01G132900 chr7D 95.858 169 5 2 4298 4466 334831235 334831069 8.670000e-69 272.0
12 TraesCS7B01G132900 chr7A 98.106 1742 30 3 2683 4422 206718922 206717182 0.000000e+00 3031.0
13 TraesCS7B01G132900 chr7A 95.540 1816 58 12 880 2685 206720273 206718471 0.000000e+00 2883.0
14 TraesCS7B01G132900 chr7A 95.163 1013 23 6 4742 5750 206717184 206716194 0.000000e+00 1576.0
15 TraesCS7B01G132900 chr7A 95.383 888 29 5 5906 6783 206715236 206714351 0.000000e+00 1402.0
16 TraesCS7B01G132900 chr7A 85.533 553 42 23 1 530 206721432 206720895 1.660000e-150 544.0
17 TraesCS7B01G132900 chr7A 96.450 169 4 2 4298 4466 379906374 379906208 1.860000e-70 278.0
18 TraesCS7B01G132900 chr7A 94.767 172 7 2 4298 4468 105168827 105168997 4.030000e-67 267.0
19 TraesCS7B01G132900 chr7A 92.405 79 6 0 5743 5821 206715371 206715293 5.560000e-21 113.0
20 TraesCS7B01G132900 chr1D 91.166 1664 90 28 2683 4307 459894343 459892698 0.000000e+00 2206.0
21 TraesCS7B01G132900 chr1D 89.715 1546 96 27 1163 2685 459895406 459893901 0.000000e+00 1916.0
22 TraesCS7B01G132900 chr1D 85.608 674 59 14 5133 5776 459892546 459891881 0.000000e+00 673.0
23 TraesCS7B01G132900 chr1D 95.333 150 6 1 4464 4612 459892710 459892561 3.160000e-58 237.0
24 TraesCS7B01G132900 chr1D 92.414 145 6 5 6411 6552 459891707 459891565 1.150000e-47 202.0
25 TraesCS7B01G132900 chr1D 89.831 118 3 3 6675 6783 459891572 459891455 7.090000e-30 143.0
26 TraesCS7B01G132900 chr1D 79.612 103 14 5 605 703 148653234 148653333 4.390000e-07 67.6
27 TraesCS7B01G132900 chr1A 91.150 1661 91 30 2684 4307 551609381 551607740 0.000000e+00 2202.0
28 TraesCS7B01G132900 chr1A 89.061 1545 105 25 1164 2685 551610443 551608940 0.000000e+00 1858.0
29 TraesCS7B01G132900 chr1A 85.490 1337 116 37 4464 5776 551607752 551606470 0.000000e+00 1323.0
30 TraesCS7B01G132900 chr1B 90.741 1566 88 29 2780 4307 632006320 632004774 0.000000e+00 2036.0
31 TraesCS7B01G132900 chr1B 84.288 751 74 19 4757 5492 632004532 632003811 0.000000e+00 693.0
32 TraesCS7B01G132900 chr1B 88.688 442 32 7 1778 2219 632006742 632006319 2.170000e-144 523.0
33 TraesCS7B01G132900 chr1B 91.854 356 17 5 2331 2685 632006320 632005976 2.840000e-133 486.0
34 TraesCS7B01G132900 chr1B 94.186 258 11 2 4464 4721 632004786 632004533 2.290000e-104 390.0
35 TraesCS7B01G132900 chr1B 89.447 199 14 2 6588 6779 632003164 632002966 1.890000e-60 244.0
36 TraesCS7B01G132900 chr1B 86.147 231 22 4 5518 5738 632003822 632003592 2.440000e-59 241.0
37 TraesCS7B01G132900 chr1B 88.950 181 17 2 1599 1776 632007019 632006839 3.180000e-53 220.0
38 TraesCS7B01G132900 chr1B 97.727 88 2 0 6448 6535 632003248 632003161 1.180000e-32 152.0
39 TraesCS7B01G132900 chr1B 93.023 86 6 0 5832 5917 34210112 34210027 7.140000e-25 126.0
40 TraesCS7B01G132900 chr4D 95.833 168 6 1 4298 4465 428723792 428723958 3.120000e-68 270.0
41 TraesCS7B01G132900 chr3A 94.767 172 7 2 4298 4468 642038772 642038942 4.030000e-67 267.0
42 TraesCS7B01G132900 chr2D 92.896 183 9 4 4298 4478 155831486 155831306 5.220000e-66 263.0
43 TraesCS7B01G132900 chr2D 83.854 192 21 4 5368 5551 106999396 106999585 2.510000e-39 174.0
44 TraesCS7B01G132900 chr2D 96.104 77 3 0 5832 5908 462864804 462864880 7.140000e-25 126.0
45 TraesCS7B01G132900 chr2A 91.282 195 10 7 4298 4488 498090099 498089908 6.750000e-65 259.0
46 TraesCS7B01G132900 chr6B 96.104 77 3 0 5832 5908 349639509 349639433 7.140000e-25 126.0
47 TraesCS7B01G132900 chr6B 96.104 77 3 0 5832 5908 589204168 589204244 7.140000e-25 126.0
48 TraesCS7B01G132900 chr5B 96.104 77 3 0 5832 5908 159531367 159531443 7.140000e-25 126.0
49 TraesCS7B01G132900 chr5B 96.104 77 3 0 5832 5908 624513879 624513955 7.140000e-25 126.0
50 TraesCS7B01G132900 chr5B 87.037 54 5 2 594 645 545200023 545200076 7.350000e-05 60.2
51 TraesCS7B01G132900 chr2B 96.104 77 3 0 5832 5908 153279163 153279239 7.140000e-25 126.0
52 TraesCS7B01G132900 chr4B 87.143 70 7 2 594 662 444356812 444356744 2.030000e-10 78.7
53 TraesCS7B01G132900 chr3D 84.146 82 5 7 557 632 579577129 579577208 9.440000e-09 73.1
54 TraesCS7B01G132900 chr3D 94.737 38 2 0 595 632 579560990 579561027 7.350000e-05 60.2
55 TraesCS7B01G132900 chr3D 94.737 38 2 0 595 632 579566500 579566537 7.350000e-05 60.2
56 TraesCS7B01G132900 chr6A 86.154 65 5 4 594 655 608363090 608363153 4.390000e-07 67.6
57 TraesCS7B01G132900 chr5A 93.182 44 1 2 589 632 46490947 46490906 5.680000e-06 63.9
58 TraesCS7B01G132900 chr5D 86.792 53 7 0 605 657 561634056 561634004 7.350000e-05 60.2
59 TraesCS7B01G132900 chr5D 89.362 47 3 2 594 639 442485081 442485126 2.640000e-04 58.4
60 TraesCS7B01G132900 chr5D 100.000 30 0 0 605 634 442484741 442484770 1.000000e-03 56.5
61 TraesCS7B01G132900 chr5D 100.000 30 0 0 605 634 442484983 442485012 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G132900 chr7B 161652647 161659429 6782 True 4717.333333 12526 99.411333 1 6783 3 chr7B.!!$R3 6782
1 TraesCS7B01G132900 chr7D 197301969 197308214 6245 True 3234.666667 5361 96.310000 888 6783 3 chr7D.!!$R3 5895
2 TraesCS7B01G132900 chr7D 197342013 197342747 734 True 837.000000 837 87.838000 1 711 1 chr7D.!!$R1 710
3 TraesCS7B01G132900 chr7A 206714351 206721432 7081 True 1591.500000 3031 93.688333 1 6783 6 chr7A.!!$R2 6782
4 TraesCS7B01G132900 chr1D 459891455 459895406 3951 True 896.166667 2206 90.677833 1163 6783 6 chr1D.!!$R1 5620
5 TraesCS7B01G132900 chr1A 551606470 551610443 3973 True 1794.333333 2202 88.567000 1164 5776 3 chr1A.!!$R1 4612
6 TraesCS7B01G132900 chr1B 632002966 632007019 4053 True 553.888889 2036 90.225333 1599 6779 9 chr1B.!!$R2 5180

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
869 1088 0.034059 CTCAGATGTCGCCCCCATAC 59.966 60.000 0.00 0.00 0.00 2.39 F
2489 3061 0.394938 TTGCTTGCACTAACTCCGGA 59.605 50.000 2.93 2.93 0.00 5.14 F
2516 3088 0.029834 GTTTGCACACAGTCTGGCAG 59.970 55.000 8.58 8.58 37.59 4.85 F
2544 3116 0.037326 CGCACTCTCCCAGCTTTACA 60.037 55.000 0.00 0.00 0.00 2.41 F
2545 3117 1.608025 CGCACTCTCCCAGCTTTACAA 60.608 52.381 0.00 0.00 0.00 2.41 F
4413 5031 1.072648 CCCAAAGTGGTCGAACCCTTA 59.927 52.381 0.00 0.00 37.50 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2497 3069 0.029834 CTGCCAGACTGTGTGCAAAC 59.970 55.000 0.00 0.0 33.56 2.93 R
4016 4634 1.422531 AAAGGCAAACAGGATGGCAA 58.577 45.000 0.00 0.0 45.08 4.52 R
4185 4803 3.190535 ACATGTGTTAACCGATGAAAGGC 59.809 43.478 16.79 0.0 0.00 4.35 R
4413 5031 3.953775 CTTGCACAGGGTCCGGGT 61.954 66.667 0.00 0.0 0.00 5.28 R
4533 5151 6.715347 AAGGTAACATGCAGAAAGAAGTTT 57.285 33.333 0.00 0.0 41.41 2.66 R
6108 8440 0.036164 TGAGGCGGTTGTGCAAGTAT 59.964 50.000 0.00 0.0 36.28 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
512 537 0.524862 GTGGCATTGGAGAGCAACTG 59.475 55.000 0.00 0.00 31.93 3.16
514 539 1.005097 TGGCATTGGAGAGCAACTGAT 59.995 47.619 0.00 0.00 0.00 2.90
531 747 1.270785 TGATTGAGGAGCGCTTGTTCA 60.271 47.619 13.26 13.29 0.00 3.18
534 750 0.319900 TGAGGAGCGCTTGTTCAGTC 60.320 55.000 13.26 0.00 0.00 3.51
535 751 0.319900 GAGGAGCGCTTGTTCAGTCA 60.320 55.000 13.26 0.00 0.00 3.41
539 755 0.604780 AGCGCTTGTTCAGTCATGCT 60.605 50.000 2.64 0.00 36.68 3.79
544 760 2.930887 GCTTGTTCAGTCATGCTCCGTA 60.931 50.000 0.00 0.00 36.18 4.02
551 767 0.386113 GTCATGCTCCGTACCTCTCC 59.614 60.000 0.00 0.00 0.00 3.71
563 779 4.214758 CCGTACCTCTCCAAAACGAAAAAT 59.785 41.667 0.00 0.00 35.66 1.82
598 817 4.546829 TCTGTAAGAGGCACGGTTTTAT 57.453 40.909 0.00 0.00 38.67 1.40
602 821 6.263617 TCTGTAAGAGGCACGGTTTTATTTTT 59.736 34.615 0.00 0.00 38.67 1.94
632 851 2.489971 ACGATTTTGCTTCCGTGAGAA 58.510 42.857 0.00 0.00 33.69 2.87
703 922 1.521580 GCTTCCATGAGAGGCATAGC 58.478 55.000 11.62 2.60 46.54 2.97
715 934 2.482326 GCATAGCCGTGCCTTTTCT 58.518 52.632 0.00 0.00 39.18 2.52
716 935 0.099436 GCATAGCCGTGCCTTTTCTG 59.901 55.000 0.00 0.00 39.18 3.02
717 936 1.453155 CATAGCCGTGCCTTTTCTGT 58.547 50.000 0.00 0.00 0.00 3.41
718 937 2.627945 CATAGCCGTGCCTTTTCTGTA 58.372 47.619 0.00 0.00 0.00 2.74
719 938 2.843401 TAGCCGTGCCTTTTCTGTAA 57.157 45.000 0.00 0.00 0.00 2.41
720 939 1.523758 AGCCGTGCCTTTTCTGTAAG 58.476 50.000 0.00 0.00 0.00 2.34
721 940 1.071699 AGCCGTGCCTTTTCTGTAAGA 59.928 47.619 0.00 0.00 44.68 2.10
735 954 5.401531 TCTGTAAGAGGCACGATTTTACT 57.598 39.130 0.00 0.00 38.67 2.24
736 955 5.790593 TCTGTAAGAGGCACGATTTTACTT 58.209 37.500 0.00 0.00 38.67 2.24
737 956 6.228258 TCTGTAAGAGGCACGATTTTACTTT 58.772 36.000 0.00 0.00 38.67 2.66
738 957 6.367969 TCTGTAAGAGGCACGATTTTACTTTC 59.632 38.462 0.00 0.00 38.67 2.62
739 958 4.663636 AAGAGGCACGATTTTACTTTCG 57.336 40.909 0.00 0.00 41.04 3.46
740 959 8.940128 CTGTAAGAGGCACGATTTTACTTTCGT 61.940 40.741 0.00 0.00 42.91 3.85
747 966 3.678548 ACGATTTTACTTTCGTGAGAGGC 59.321 43.478 0.00 0.00 46.03 4.70
748 967 3.678072 CGATTTTACTTTCGTGAGAGGCA 59.322 43.478 0.00 0.00 43.69 4.75
749 968 4.434330 CGATTTTACTTTCGTGAGAGGCAC 60.434 45.833 0.00 0.00 43.69 5.01
761 980 5.948992 GTGAGAGGCACAATTTTACTTCT 57.051 39.130 0.00 0.00 46.91 2.85
762 981 5.693814 GTGAGAGGCACAATTTTACTTCTG 58.306 41.667 0.00 0.00 46.91 3.02
763 982 5.239525 GTGAGAGGCACAATTTTACTTCTGT 59.760 40.000 0.00 0.00 46.91 3.41
764 983 6.426937 GTGAGAGGCACAATTTTACTTCTGTA 59.573 38.462 0.00 0.00 46.91 2.74
765 984 6.995686 TGAGAGGCACAATTTTACTTCTGTAA 59.004 34.615 0.00 0.00 36.92 2.41
766 985 7.500892 TGAGAGGCACAATTTTACTTCTGTAAA 59.499 33.333 0.00 0.00 44.16 2.01
778 997 8.441312 TTTACTTCTGTAAAAGAAATGACCGT 57.559 30.769 0.00 0.00 44.38 4.83
779 998 6.300354 ACTTCTGTAAAAGAAATGACCGTG 57.700 37.500 0.00 0.00 44.38 4.94
780 999 4.742438 TCTGTAAAAGAAATGACCGTGC 57.258 40.909 0.00 0.00 29.54 5.34
781 1000 3.500680 TCTGTAAAAGAAATGACCGTGCC 59.499 43.478 0.00 0.00 29.54 5.01
782 1001 3.482436 TGTAAAAGAAATGACCGTGCCT 58.518 40.909 0.00 0.00 0.00 4.75
783 1002 3.500680 TGTAAAAGAAATGACCGTGCCTC 59.499 43.478 0.00 0.00 0.00 4.70
784 1003 2.568623 AAAGAAATGACCGTGCCTCT 57.431 45.000 0.00 0.00 0.00 3.69
785 1004 2.100605 AAGAAATGACCGTGCCTCTC 57.899 50.000 0.00 0.00 0.00 3.20
786 1005 0.108615 AGAAATGACCGTGCCTCTCG 60.109 55.000 0.00 0.00 0.00 4.04
787 1006 0.108804 GAAATGACCGTGCCTCTCGA 60.109 55.000 0.00 0.00 0.00 4.04
788 1007 0.320374 AAATGACCGTGCCTCTCGAA 59.680 50.000 0.00 0.00 0.00 3.71
789 1008 0.320374 AATGACCGTGCCTCTCGAAA 59.680 50.000 0.00 0.00 0.00 3.46
790 1009 0.389948 ATGACCGTGCCTCTCGAAAC 60.390 55.000 0.00 0.00 0.00 2.78
791 1010 1.006571 GACCGTGCCTCTCGAAACA 60.007 57.895 0.00 0.00 0.00 2.83
792 1011 0.599204 GACCGTGCCTCTCGAAACAA 60.599 55.000 0.00 0.00 0.00 2.83
793 1012 0.179067 ACCGTGCCTCTCGAAACAAA 60.179 50.000 0.00 0.00 0.00 2.83
794 1013 0.941542 CCGTGCCTCTCGAAACAAAA 59.058 50.000 0.00 0.00 0.00 2.44
795 1014 1.332375 CCGTGCCTCTCGAAACAAAAA 59.668 47.619 0.00 0.00 0.00 1.94
839 1058 2.418368 TTTGCTTCCGTGATAGGCAT 57.582 45.000 0.00 0.00 32.87 4.40
842 1061 1.270305 TGCTTCCGTGATAGGCATAGC 60.270 52.381 0.00 0.00 33.54 2.97
856 1075 0.678395 CATAGCCGTGCCTCTCAGAT 59.322 55.000 0.00 0.00 0.00 2.90
857 1076 0.678395 ATAGCCGTGCCTCTCAGATG 59.322 55.000 0.00 0.00 0.00 2.90
858 1077 0.684479 TAGCCGTGCCTCTCAGATGT 60.684 55.000 0.00 0.00 0.00 3.06
859 1078 1.520342 GCCGTGCCTCTCAGATGTC 60.520 63.158 0.00 0.00 0.00 3.06
860 1079 1.226802 CCGTGCCTCTCAGATGTCG 60.227 63.158 0.00 0.00 0.00 4.35
861 1080 1.875813 CGTGCCTCTCAGATGTCGC 60.876 63.158 0.00 0.00 0.00 5.19
862 1081 1.520342 GTGCCTCTCAGATGTCGCC 60.520 63.158 0.00 0.00 0.00 5.54
863 1082 2.107953 GCCTCTCAGATGTCGCCC 59.892 66.667 0.00 0.00 0.00 6.13
864 1083 2.818132 CCTCTCAGATGTCGCCCC 59.182 66.667 0.00 0.00 0.00 5.80
865 1084 2.801631 CCTCTCAGATGTCGCCCCC 61.802 68.421 0.00 0.00 0.00 5.40
866 1085 2.038813 TCTCAGATGTCGCCCCCA 59.961 61.111 0.00 0.00 0.00 4.96
867 1086 1.383109 TCTCAGATGTCGCCCCCAT 60.383 57.895 0.00 0.00 0.00 4.00
868 1087 0.105709 TCTCAGATGTCGCCCCCATA 60.106 55.000 0.00 0.00 0.00 2.74
869 1088 0.034059 CTCAGATGTCGCCCCCATAC 59.966 60.000 0.00 0.00 0.00 2.39
871 1090 0.034059 CAGATGTCGCCCCCATACTC 59.966 60.000 0.00 0.00 0.00 2.59
872 1091 1.122019 AGATGTCGCCCCCATACTCC 61.122 60.000 0.00 0.00 0.00 3.85
873 1092 2.113243 GATGTCGCCCCCATACTCCC 62.113 65.000 0.00 0.00 0.00 4.30
875 1094 2.445845 TCGCCCCCATACTCCCTG 60.446 66.667 0.00 0.00 0.00 4.45
876 1095 4.256180 CGCCCCCATACTCCCTGC 62.256 72.222 0.00 0.00 0.00 4.85
878 1097 2.386935 GCCCCCATACTCCCTGCTT 61.387 63.158 0.00 0.00 0.00 3.91
958 1397 1.325355 TAGATACCTACGCCCAGCAC 58.675 55.000 0.00 0.00 0.00 4.40
971 1410 2.203907 AGCACTCACTGAGGCCCT 60.204 61.111 10.86 0.00 33.35 5.19
1023 1462 2.341543 CACAGAGACGCAGCACCT 59.658 61.111 0.00 0.00 0.00 4.00
1301 1740 9.866798 TGCACATATATTTTGTTTGAAGCATTA 57.133 25.926 0.00 0.00 0.00 1.90
1462 1904 2.131183 GAGTGCCTGACAGATTATCGC 58.869 52.381 3.32 0.00 0.00 4.58
1463 1905 0.855349 GTGCCTGACAGATTATCGCG 59.145 55.000 3.32 0.00 0.00 5.87
1566 2029 4.346730 TGCCAGTGATCCAGAATTTGATT 58.653 39.130 0.00 0.00 0.00 2.57
1568 2031 5.246656 TGCCAGTGATCCAGAATTTGATTTT 59.753 36.000 0.00 0.00 0.00 1.82
1812 2383 5.362717 TGTTTCCATACATCTCGGTCTGTAT 59.637 40.000 0.00 0.00 38.73 2.29
1837 2408 3.953712 TTCAGCAGAACAGGTCGATTA 57.046 42.857 0.00 0.00 0.00 1.75
1854 2425 5.237344 GTCGATTACCCTTCAGATGATTTGG 59.763 44.000 0.00 0.00 0.00 3.28
1855 2426 4.516698 CGATTACCCTTCAGATGATTTGGG 59.483 45.833 11.95 11.95 36.32 4.12
1970 2542 8.198109 TGATACATAGTTTGTCTCTTTAGCCTC 58.802 37.037 0.00 0.00 39.87 4.70
2327 2899 5.221244 GCAACAAACTCATTACCTCCTTTGT 60.221 40.000 0.00 0.00 34.18 2.83
2328 2900 6.016610 GCAACAAACTCATTACCTCCTTTGTA 60.017 38.462 0.00 0.00 32.81 2.41
2329 2901 7.309194 GCAACAAACTCATTACCTCCTTTGTAT 60.309 37.037 0.00 0.00 32.81 2.29
2330 2902 9.226606 CAACAAACTCATTACCTCCTTTGTATA 57.773 33.333 0.00 0.00 32.81 1.47
2331 2903 9.975218 AACAAACTCATTACCTCCTTTGTATAT 57.025 29.630 0.00 0.00 32.81 0.86
2332 2904 9.614792 ACAAACTCATTACCTCCTTTGTATATC 57.385 33.333 0.00 0.00 31.67 1.63
2333 2905 9.838339 CAAACTCATTACCTCCTTTGTATATCT 57.162 33.333 0.00 0.00 0.00 1.98
2361 2933 9.734620 TCTAATTCTGTTTTTGTCTTCAACATG 57.265 29.630 0.00 0.00 37.82 3.21
2362 2934 9.734620 CTAATTCTGTTTTTGTCTTCAACATGA 57.265 29.630 0.00 0.00 37.82 3.07
2364 2936 7.810766 TTCTGTTTTTGTCTTCAACATGAAC 57.189 32.000 0.00 0.00 37.82 3.18
2365 2937 6.027131 TCTGTTTTTGTCTTCAACATGAACG 58.973 36.000 0.00 0.00 37.82 3.95
2366 2938 5.944013 TGTTTTTGTCTTCAACATGAACGA 58.056 33.333 0.00 0.00 37.82 3.85
2367 2939 6.382608 TGTTTTTGTCTTCAACATGAACGAA 58.617 32.000 0.00 0.00 37.82 3.85
2368 2940 7.032580 TGTTTTTGTCTTCAACATGAACGAAT 58.967 30.769 0.00 0.00 37.82 3.34
2369 2941 7.543868 TGTTTTTGTCTTCAACATGAACGAATT 59.456 29.630 0.00 0.00 37.82 2.17
2370 2942 8.379902 GTTTTTGTCTTCAACATGAACGAATTT 58.620 29.630 0.00 0.00 37.82 1.82
2371 2943 9.574458 TTTTTGTCTTCAACATGAACGAATTTA 57.426 25.926 0.00 0.00 37.82 1.40
2372 2944 9.574458 TTTTGTCTTCAACATGAACGAATTTAA 57.426 25.926 0.00 0.00 37.82 1.52
2373 2945 8.555166 TTGTCTTCAACATGAACGAATTTAAC 57.445 30.769 0.00 0.00 37.82 2.01
2374 2946 7.925993 TGTCTTCAACATGAACGAATTTAACT 58.074 30.769 0.00 0.00 32.21 2.24
2375 2947 9.047371 TGTCTTCAACATGAACGAATTTAACTA 57.953 29.630 0.00 0.00 32.21 2.24
2376 2948 9.872757 GTCTTCAACATGAACGAATTTAACTAA 57.127 29.630 0.00 0.00 32.21 2.24
2400 2972 7.532682 AATCTTCTCTTGAGACTTTATTCGC 57.467 36.000 0.00 0.00 0.00 4.70
2401 2973 6.274157 TCTTCTCTTGAGACTTTATTCGCT 57.726 37.500 0.00 0.00 0.00 4.93
2402 2974 7.392494 TCTTCTCTTGAGACTTTATTCGCTA 57.608 36.000 0.00 0.00 0.00 4.26
2403 2975 7.476667 TCTTCTCTTGAGACTTTATTCGCTAG 58.523 38.462 0.00 0.00 0.00 3.42
2404 2976 6.761099 TCTCTTGAGACTTTATTCGCTAGT 57.239 37.500 0.00 0.00 0.00 2.57
2405 2977 6.556212 TCTCTTGAGACTTTATTCGCTAGTG 58.444 40.000 0.00 0.00 0.00 2.74
2406 2978 5.103000 TCTTGAGACTTTATTCGCTAGTGC 58.897 41.667 0.00 0.00 0.00 4.40
2416 2988 4.152625 GCTAGTGCGTGCAAGCGG 62.153 66.667 19.67 10.53 40.67 5.52
2417 2989 2.738521 CTAGTGCGTGCAAGCGGT 60.739 61.111 19.67 11.52 40.67 5.68
2418 2990 2.280524 TAGTGCGTGCAAGCGGTT 60.281 55.556 19.67 9.93 40.67 4.44
2419 2991 1.841663 CTAGTGCGTGCAAGCGGTTT 61.842 55.000 19.67 7.55 40.67 3.27
2420 2992 1.440938 TAGTGCGTGCAAGCGGTTTT 61.441 50.000 19.67 5.87 40.67 2.43
2421 2993 1.876263 GTGCGTGCAAGCGGTTTTT 60.876 52.632 19.67 0.00 40.67 1.94
2422 2994 1.875813 TGCGTGCAAGCGGTTTTTG 60.876 52.632 19.67 0.00 40.67 2.44
2423 2995 1.876263 GCGTGCAAGCGGTTTTTGT 60.876 52.632 9.33 0.00 0.00 2.83
2424 2996 1.417577 GCGTGCAAGCGGTTTTTGTT 61.418 50.000 9.33 0.00 0.00 2.83
2425 2997 0.570272 CGTGCAAGCGGTTTTTGTTC 59.430 50.000 0.00 0.00 0.00 3.18
2426 2998 1.634702 GTGCAAGCGGTTTTTGTTCA 58.365 45.000 0.00 0.00 0.00 3.18
2427 2999 2.200899 GTGCAAGCGGTTTTTGTTCAT 58.799 42.857 0.00 0.00 0.00 2.57
2428 3000 2.033832 GTGCAAGCGGTTTTTGTTCATG 60.034 45.455 0.00 0.00 0.00 3.07
2429 3001 2.159184 TGCAAGCGGTTTTTGTTCATGA 60.159 40.909 0.00 0.00 0.00 3.07
2430 3002 2.863137 GCAAGCGGTTTTTGTTCATGAA 59.137 40.909 3.38 3.38 0.00 2.57
2431 3003 3.494251 GCAAGCGGTTTTTGTTCATGAAT 59.506 39.130 12.12 0.00 0.00 2.57
2432 3004 4.683781 GCAAGCGGTTTTTGTTCATGAATA 59.316 37.500 12.12 6.04 0.00 1.75
2433 3005 5.388371 GCAAGCGGTTTTTGTTCATGAATAC 60.388 40.000 12.12 0.42 0.00 1.89
2434 3006 4.805219 AGCGGTTTTTGTTCATGAATACC 58.195 39.130 12.12 12.50 0.00 2.73
2435 3007 4.279671 AGCGGTTTTTGTTCATGAATACCA 59.720 37.500 12.12 2.04 30.30 3.25
2436 3008 5.047377 AGCGGTTTTTGTTCATGAATACCAT 60.047 36.000 12.12 4.16 35.44 3.55
2437 3009 5.637387 GCGGTTTTTGTTCATGAATACCATT 59.363 36.000 12.12 0.00 31.94 3.16
2438 3010 6.400940 GCGGTTTTTGTTCATGAATACCATTG 60.401 38.462 12.12 0.54 31.94 2.82
2439 3011 6.865726 CGGTTTTTGTTCATGAATACCATTGA 59.134 34.615 12.12 0.00 31.94 2.57
2440 3012 7.545265 CGGTTTTTGTTCATGAATACCATTGAT 59.455 33.333 12.12 0.00 31.94 2.57
2441 3013 8.872845 GGTTTTTGTTCATGAATACCATTGATC 58.127 33.333 12.12 0.00 31.94 2.92
2442 3014 9.643693 GTTTTTGTTCATGAATACCATTGATCT 57.356 29.630 12.12 0.00 31.94 2.75
2447 3019 9.904198 TGTTCATGAATACCATTGATCTAAAGA 57.096 29.630 12.12 0.00 31.94 2.52
2449 3021 8.593492 TCATGAATACCATTGATCTAAAGACG 57.407 34.615 0.00 0.00 31.94 4.18
2450 3022 7.657354 TCATGAATACCATTGATCTAAAGACGG 59.343 37.037 0.00 0.00 31.94 4.79
2451 3023 6.884832 TGAATACCATTGATCTAAAGACGGT 58.115 36.000 0.00 0.00 0.00 4.83
2452 3024 7.335627 TGAATACCATTGATCTAAAGACGGTT 58.664 34.615 0.00 0.00 0.00 4.44
2453 3025 8.479689 TGAATACCATTGATCTAAAGACGGTTA 58.520 33.333 0.00 0.00 0.00 2.85
2454 3026 9.490379 GAATACCATTGATCTAAAGACGGTTAT 57.510 33.333 0.00 0.00 0.00 1.89
2458 3030 9.326413 ACCATTGATCTAAAGACGGTTATAAAG 57.674 33.333 0.00 0.00 0.00 1.85
2459 3031 8.283291 CCATTGATCTAAAGACGGTTATAAAGC 58.717 37.037 0.00 0.00 0.00 3.51
2460 3032 8.826710 CATTGATCTAAAGACGGTTATAAAGCA 58.173 33.333 0.00 0.00 0.00 3.91
2461 3033 8.958119 TTGATCTAAAGACGGTTATAAAGCAT 57.042 30.769 0.00 0.00 0.00 3.79
2462 3034 8.365399 TGATCTAAAGACGGTTATAAAGCATG 57.635 34.615 0.00 0.00 0.00 4.06
2463 3035 7.985184 TGATCTAAAGACGGTTATAAAGCATGT 59.015 33.333 0.00 0.00 0.00 3.21
2464 3036 9.472361 GATCTAAAGACGGTTATAAAGCATGTA 57.528 33.333 0.00 0.00 0.00 2.29
2465 3037 8.867112 TCTAAAGACGGTTATAAAGCATGTAG 57.133 34.615 0.00 0.00 0.00 2.74
2466 3038 5.986004 AAGACGGTTATAAAGCATGTAGC 57.014 39.130 0.00 0.00 46.19 3.58
2484 3056 2.781945 GCTTGTTGCTTGCACTAACT 57.218 45.000 0.00 0.00 38.95 2.24
2485 3057 2.654987 GCTTGTTGCTTGCACTAACTC 58.345 47.619 0.00 0.00 38.95 3.01
2486 3058 2.605580 GCTTGTTGCTTGCACTAACTCC 60.606 50.000 0.00 0.00 38.95 3.85
2487 3059 1.225855 TGTTGCTTGCACTAACTCCG 58.774 50.000 0.00 0.00 0.00 4.63
2488 3060 0.517316 GTTGCTTGCACTAACTCCGG 59.483 55.000 0.00 0.00 0.00 5.14
2489 3061 0.394938 TTGCTTGCACTAACTCCGGA 59.605 50.000 2.93 2.93 0.00 5.14
2490 3062 0.394938 TGCTTGCACTAACTCCGGAA 59.605 50.000 5.23 0.00 0.00 4.30
2491 3063 1.079503 GCTTGCACTAACTCCGGAAG 58.920 55.000 5.23 2.16 0.00 3.46
2492 3064 1.608283 GCTTGCACTAACTCCGGAAGT 60.608 52.381 5.23 2.95 41.10 3.01
2493 3065 2.338500 CTTGCACTAACTCCGGAAGTC 58.662 52.381 5.23 1.82 37.17 3.01
2494 3066 1.334160 TGCACTAACTCCGGAAGTCA 58.666 50.000 5.23 4.41 37.17 3.41
2495 3067 1.899814 TGCACTAACTCCGGAAGTCAT 59.100 47.619 5.23 0.00 37.17 3.06
2496 3068 2.301870 TGCACTAACTCCGGAAGTCATT 59.698 45.455 5.23 0.00 37.17 2.57
2497 3069 2.673368 GCACTAACTCCGGAAGTCATTG 59.327 50.000 5.23 0.00 37.17 2.82
2498 3070 3.864921 GCACTAACTCCGGAAGTCATTGT 60.865 47.826 5.23 0.00 37.17 2.71
2499 3071 4.315803 CACTAACTCCGGAAGTCATTGTT 58.684 43.478 5.23 6.93 37.17 2.83
2500 3072 4.755123 CACTAACTCCGGAAGTCATTGTTT 59.245 41.667 5.23 0.00 37.17 2.83
2501 3073 4.755123 ACTAACTCCGGAAGTCATTGTTTG 59.245 41.667 5.23 7.92 37.17 2.93
2502 3074 1.880027 ACTCCGGAAGTCATTGTTTGC 59.120 47.619 5.23 0.00 30.02 3.68
2503 3075 1.879380 CTCCGGAAGTCATTGTTTGCA 59.121 47.619 5.23 0.00 0.00 4.08
2504 3076 1.606668 TCCGGAAGTCATTGTTTGCAC 59.393 47.619 0.00 0.00 0.00 4.57
2505 3077 1.336440 CCGGAAGTCATTGTTTGCACA 59.664 47.619 0.00 0.00 0.00 4.57
2506 3078 2.384382 CGGAAGTCATTGTTTGCACAC 58.616 47.619 0.00 0.00 30.32 3.82
2507 3079 2.223456 CGGAAGTCATTGTTTGCACACA 60.223 45.455 0.45 0.45 30.32 3.72
2508 3080 3.374745 GGAAGTCATTGTTTGCACACAG 58.625 45.455 5.73 0.00 30.32 3.66
2509 3081 3.181487 GGAAGTCATTGTTTGCACACAGT 60.181 43.478 5.73 0.00 30.32 3.55
2510 3082 3.698029 AGTCATTGTTTGCACACAGTC 57.302 42.857 5.73 0.00 30.32 3.51
2511 3083 3.282021 AGTCATTGTTTGCACACAGTCT 58.718 40.909 5.73 1.47 30.32 3.24
2512 3084 3.065786 AGTCATTGTTTGCACACAGTCTG 59.934 43.478 5.73 5.98 30.32 3.51
2513 3085 2.358582 TCATTGTTTGCACACAGTCTGG 59.641 45.455 5.73 0.00 30.32 3.86
2514 3086 0.455410 TTGTTTGCACACAGTCTGGC 59.545 50.000 5.73 0.00 30.32 4.85
2515 3087 0.679321 TGTTTGCACACAGTCTGGCA 60.679 50.000 0.45 1.34 0.00 4.92
2516 3088 0.029834 GTTTGCACACAGTCTGGCAG 59.970 55.000 8.58 8.58 37.59 4.85
2517 3089 1.102809 TTTGCACACAGTCTGGCAGG 61.103 55.000 15.73 0.62 37.59 4.85
2518 3090 3.360340 GCACACAGTCTGGCAGGC 61.360 66.667 12.08 12.08 0.00 4.85
2519 3091 2.111669 CACACAGTCTGGCAGGCA 59.888 61.111 22.82 0.00 0.00 4.75
2520 3092 1.303074 CACACAGTCTGGCAGGCAT 60.303 57.895 22.82 5.91 0.00 4.40
2521 3093 0.892358 CACACAGTCTGGCAGGCATT 60.892 55.000 22.82 4.02 0.00 3.56
2522 3094 0.892358 ACACAGTCTGGCAGGCATTG 60.892 55.000 22.82 18.86 0.00 2.82
2523 3095 0.892358 CACAGTCTGGCAGGCATTGT 60.892 55.000 22.82 14.94 0.00 2.71
2524 3096 0.178981 ACAGTCTGGCAGGCATTGTT 60.179 50.000 22.82 0.00 0.00 2.83
2525 3097 0.524862 CAGTCTGGCAGGCATTGTTC 59.475 55.000 22.82 0.00 0.00 3.18
2526 3098 0.957395 AGTCTGGCAGGCATTGTTCG 60.957 55.000 22.82 0.00 0.00 3.95
2527 3099 2.180017 CTGGCAGGCATTGTTCGC 59.820 61.111 6.61 0.00 0.00 4.70
2528 3100 2.596923 TGGCAGGCATTGTTCGCA 60.597 55.556 0.00 0.00 0.00 5.10
2529 3101 2.126346 GGCAGGCATTGTTCGCAC 60.126 61.111 0.00 0.00 0.00 5.34
2530 3102 2.629656 GGCAGGCATTGTTCGCACT 61.630 57.895 0.00 0.00 0.00 4.40
2531 3103 1.154150 GCAGGCATTGTTCGCACTC 60.154 57.895 0.00 0.00 0.00 3.51
2532 3104 1.580845 GCAGGCATTGTTCGCACTCT 61.581 55.000 0.00 0.00 0.00 3.24
2533 3105 0.445436 CAGGCATTGTTCGCACTCTC 59.555 55.000 0.00 0.00 0.00 3.20
2534 3106 0.674895 AGGCATTGTTCGCACTCTCC 60.675 55.000 0.00 0.00 0.00 3.71
2535 3107 1.648467 GGCATTGTTCGCACTCTCCC 61.648 60.000 0.00 0.00 0.00 4.30
2536 3108 0.955428 GCATTGTTCGCACTCTCCCA 60.955 55.000 0.00 0.00 0.00 4.37
2537 3109 1.081892 CATTGTTCGCACTCTCCCAG 58.918 55.000 0.00 0.00 0.00 4.45
2538 3110 0.674895 ATTGTTCGCACTCTCCCAGC 60.675 55.000 0.00 0.00 0.00 4.85
2539 3111 1.758440 TTGTTCGCACTCTCCCAGCT 61.758 55.000 0.00 0.00 0.00 4.24
2540 3112 1.004440 GTTCGCACTCTCCCAGCTT 60.004 57.895 0.00 0.00 0.00 3.74
2541 3113 0.603975 GTTCGCACTCTCCCAGCTTT 60.604 55.000 0.00 0.00 0.00 3.51
2542 3114 0.973632 TTCGCACTCTCCCAGCTTTA 59.026 50.000 0.00 0.00 0.00 1.85
2543 3115 0.246635 TCGCACTCTCCCAGCTTTAC 59.753 55.000 0.00 0.00 0.00 2.01
2544 3116 0.037326 CGCACTCTCCCAGCTTTACA 60.037 55.000 0.00 0.00 0.00 2.41
2545 3117 1.608025 CGCACTCTCCCAGCTTTACAA 60.608 52.381 0.00 0.00 0.00 2.41
2546 3118 2.504367 GCACTCTCCCAGCTTTACAAA 58.496 47.619 0.00 0.00 0.00 2.83
2547 3119 3.084786 GCACTCTCCCAGCTTTACAAAT 58.915 45.455 0.00 0.00 0.00 2.32
2548 3120 4.261801 GCACTCTCCCAGCTTTACAAATA 58.738 43.478 0.00 0.00 0.00 1.40
2549 3121 4.333926 GCACTCTCCCAGCTTTACAAATAG 59.666 45.833 0.00 0.00 0.00 1.73
2550 3122 5.491982 CACTCTCCCAGCTTTACAAATAGT 58.508 41.667 0.00 0.00 0.00 2.12
2551 3123 6.640518 CACTCTCCCAGCTTTACAAATAGTA 58.359 40.000 0.00 0.00 0.00 1.82
2552 3124 6.758886 CACTCTCCCAGCTTTACAAATAGTAG 59.241 42.308 0.00 0.00 33.43 2.57
2553 3125 6.668283 ACTCTCCCAGCTTTACAAATAGTAGA 59.332 38.462 0.00 0.00 33.43 2.59
2554 3126 7.180408 ACTCTCCCAGCTTTACAAATAGTAGAA 59.820 37.037 0.00 0.00 33.43 2.10
2555 3127 8.090788 TCTCCCAGCTTTACAAATAGTAGAAT 57.909 34.615 0.00 0.00 33.43 2.40
2556 3128 8.548877 TCTCCCAGCTTTACAAATAGTAGAATT 58.451 33.333 0.00 0.00 33.43 2.17
2557 3129 9.178758 CTCCCAGCTTTACAAATAGTAGAATTT 57.821 33.333 0.00 0.00 33.43 1.82
2622 3194 8.991243 ATGTTTGAATCATCTTGTTGGTATTG 57.009 30.769 0.00 0.00 0.00 1.90
2623 3195 8.175925 TGTTTGAATCATCTTGTTGGTATTGA 57.824 30.769 0.00 0.00 0.00 2.57
2624 3196 8.637099 TGTTTGAATCATCTTGTTGGTATTGAA 58.363 29.630 0.00 0.00 0.00 2.69
2625 3197 9.132521 GTTTGAATCATCTTGTTGGTATTGAAG 57.867 33.333 0.00 0.00 0.00 3.02
2626 3198 7.395190 TGAATCATCTTGTTGGTATTGAAGG 57.605 36.000 0.00 0.00 0.00 3.46
2627 3199 6.947733 TGAATCATCTTGTTGGTATTGAAGGT 59.052 34.615 0.00 0.00 0.00 3.50
2628 3200 8.106462 TGAATCATCTTGTTGGTATTGAAGGTA 58.894 33.333 0.00 0.00 0.00 3.08
2629 3201 7.865706 ATCATCTTGTTGGTATTGAAGGTAC 57.134 36.000 0.00 0.00 0.00 3.34
2631 3203 8.141298 TCATCTTGTTGGTATTGAAGGTACTA 57.859 34.615 0.00 0.00 38.49 1.82
2632 3204 8.038944 TCATCTTGTTGGTATTGAAGGTACTAC 58.961 37.037 0.00 0.00 38.49 2.73
2633 3205 7.305813 TCTTGTTGGTATTGAAGGTACTACA 57.694 36.000 0.00 0.00 38.49 2.74
2634 3206 7.156673 TCTTGTTGGTATTGAAGGTACTACAC 58.843 38.462 0.00 0.00 38.49 2.90
2635 3207 6.675413 TGTTGGTATTGAAGGTACTACACT 57.325 37.500 0.00 0.00 38.49 3.55
2636 3208 6.460781 TGTTGGTATTGAAGGTACTACACTG 58.539 40.000 0.00 0.00 38.49 3.66
2637 3209 5.670792 TGGTATTGAAGGTACTACACTGG 57.329 43.478 0.00 0.00 38.49 4.00
2638 3210 5.335261 TGGTATTGAAGGTACTACACTGGA 58.665 41.667 0.00 0.00 38.49 3.86
2639 3211 5.962031 TGGTATTGAAGGTACTACACTGGAT 59.038 40.000 0.00 0.00 38.49 3.41
2640 3212 7.127405 TGGTATTGAAGGTACTACACTGGATA 58.873 38.462 0.00 0.00 38.49 2.59
2641 3213 7.787904 TGGTATTGAAGGTACTACACTGGATAT 59.212 37.037 0.00 0.00 38.49 1.63
2642 3214 8.305317 GGTATTGAAGGTACTACACTGGATATC 58.695 40.741 0.00 0.00 38.49 1.63
2643 3215 6.726490 TTGAAGGTACTACACTGGATATCC 57.274 41.667 15.39 15.39 38.49 2.59
2644 3216 5.145564 TGAAGGTACTACACTGGATATCCC 58.854 45.833 19.34 1.87 38.49 3.85
2645 3217 4.827036 AGGTACTACACTGGATATCCCA 57.173 45.455 19.34 6.52 39.36 4.37
2646 3218 5.152306 AGGTACTACACTGGATATCCCAA 57.848 43.478 19.34 0.10 40.89 4.12
2647 3219 5.148502 AGGTACTACACTGGATATCCCAAG 58.851 45.833 19.34 12.90 40.89 3.61
2648 3220 4.283722 GGTACTACACTGGATATCCCAAGG 59.716 50.000 19.34 8.54 46.07 3.61
2649 3221 4.280789 ACTACACTGGATATCCCAAGGA 57.719 45.455 19.34 4.37 46.07 3.36
2650 3222 4.832492 ACTACACTGGATATCCCAAGGAT 58.168 43.478 19.34 6.05 46.07 3.24
2651 3223 4.841246 ACTACACTGGATATCCCAAGGATC 59.159 45.833 19.34 0.00 46.07 3.36
2652 3224 3.946824 ACACTGGATATCCCAAGGATCT 58.053 45.455 19.34 0.00 46.07 2.75
2653 3225 5.093236 ACACTGGATATCCCAAGGATCTA 57.907 43.478 19.34 0.00 46.07 1.98
2654 3226 5.090139 ACACTGGATATCCCAAGGATCTAG 58.910 45.833 19.34 8.65 46.07 2.43
2655 3227 4.469227 CACTGGATATCCCAAGGATCTAGG 59.531 50.000 19.34 0.00 46.07 3.02
2656 3228 4.110426 ACTGGATATCCCAAGGATCTAGGT 59.890 45.833 19.34 0.00 46.07 3.08
2657 3229 4.689062 TGGATATCCCAAGGATCTAGGTC 58.311 47.826 19.34 0.00 42.11 3.85
2658 3230 4.034410 GGATATCCCAAGGATCTAGGTCC 58.966 52.174 14.79 14.79 42.11 4.46
2659 3231 4.512942 GGATATCCCAAGGATCTAGGTCCA 60.513 50.000 24.20 2.93 42.11 4.02
2660 3232 3.663298 ATCCCAAGGATCTAGGTCCAT 57.337 47.619 24.20 9.67 38.09 3.41
2661 3233 2.977808 TCCCAAGGATCTAGGTCCATC 58.022 52.381 24.20 2.68 40.90 3.51
2662 3234 2.250008 TCCCAAGGATCTAGGTCCATCA 59.750 50.000 24.20 0.08 40.90 3.07
2663 3235 3.048600 CCCAAGGATCTAGGTCCATCAA 58.951 50.000 24.20 0.00 40.90 2.57
2664 3236 3.072184 CCCAAGGATCTAGGTCCATCAAG 59.928 52.174 24.20 8.28 40.90 3.02
2665 3237 3.969976 CCAAGGATCTAGGTCCATCAAGA 59.030 47.826 24.20 0.00 40.90 3.02
2666 3238 4.410228 CCAAGGATCTAGGTCCATCAAGAA 59.590 45.833 24.20 0.00 40.90 2.52
2667 3239 5.072872 CCAAGGATCTAGGTCCATCAAGAAT 59.927 44.000 24.20 0.00 40.90 2.40
2668 3240 6.229733 CAAGGATCTAGGTCCATCAAGAATC 58.770 44.000 24.20 0.00 40.90 2.52
2669 3241 5.471424 AGGATCTAGGTCCATCAAGAATCA 58.529 41.667 24.20 0.00 40.90 2.57
2670 3242 6.090186 AGGATCTAGGTCCATCAAGAATCAT 58.910 40.000 24.20 0.00 40.90 2.45
2671 3243 7.251936 AGGATCTAGGTCCATCAAGAATCATA 58.748 38.462 24.20 0.00 40.90 2.15
2672 3244 7.180051 AGGATCTAGGTCCATCAAGAATCATAC 59.820 40.741 24.20 0.00 40.90 2.39
2673 3245 6.672266 TCTAGGTCCATCAAGAATCATACC 57.328 41.667 0.00 0.00 0.00 2.73
2674 3246 4.342862 AGGTCCATCAAGAATCATACCG 57.657 45.455 0.00 0.00 0.00 4.02
2675 3247 3.711704 AGGTCCATCAAGAATCATACCGT 59.288 43.478 0.00 0.00 0.00 4.83
2676 3248 4.164221 AGGTCCATCAAGAATCATACCGTT 59.836 41.667 0.00 0.00 0.00 4.44
2677 3249 4.511826 GGTCCATCAAGAATCATACCGTTC 59.488 45.833 0.00 0.00 0.00 3.95
2678 3250 5.116180 GTCCATCAAGAATCATACCGTTCA 58.884 41.667 0.00 0.00 0.00 3.18
2679 3251 5.006746 GTCCATCAAGAATCATACCGTTCAC 59.993 44.000 0.00 0.00 0.00 3.18
2680 3252 4.875536 CCATCAAGAATCATACCGTTCACA 59.124 41.667 0.00 0.00 0.00 3.58
2681 3253 5.528690 CCATCAAGAATCATACCGTTCACAT 59.471 40.000 0.00 0.00 0.00 3.21
2682 3254 6.705825 CCATCAAGAATCATACCGTTCACATA 59.294 38.462 0.00 0.00 0.00 2.29
2683 3255 7.095481 CCATCAAGAATCATACCGTTCACATAG 60.095 40.741 0.00 0.00 0.00 2.23
2684 3256 7.107639 TCAAGAATCATACCGTTCACATAGA 57.892 36.000 0.00 0.00 0.00 1.98
2685 3257 7.726216 TCAAGAATCATACCGTTCACATAGAT 58.274 34.615 0.00 0.00 0.00 1.98
2686 3258 8.856103 TCAAGAATCATACCGTTCACATAGATA 58.144 33.333 0.00 0.00 0.00 1.98
2687 3259 9.645059 CAAGAATCATACCGTTCACATAGATAT 57.355 33.333 0.00 0.00 0.00 1.63
2697 3269 9.698309 ACCGTTCACATAGATATAGAAAAGATG 57.302 33.333 0.00 0.00 0.00 2.90
2698 3270 9.698309 CCGTTCACATAGATATAGAAAAGATGT 57.302 33.333 0.00 0.00 0.00 3.06
2725 3297 8.595362 ACATATGTGGATAGAATATCTTCGGA 57.405 34.615 7.78 0.00 36.45 4.55
2726 3298 9.206690 ACATATGTGGATAGAATATCTTCGGAT 57.793 33.333 7.78 0.00 36.45 4.18
2730 3302 8.595362 TGTGGATAGAATATCTTCGGATATGT 57.405 34.615 0.00 0.00 44.27 2.29
2731 3303 9.695155 TGTGGATAGAATATCTTCGGATATGTA 57.305 33.333 0.00 0.00 44.27 2.29
2733 3305 9.355916 TGGATAGAATATCTTCGGATATGTAGG 57.644 37.037 0.00 0.00 44.27 3.18
2734 3306 8.798402 GGATAGAATATCTTCGGATATGTAGGG 58.202 40.741 0.00 0.00 44.27 3.53
2735 3307 9.357161 GATAGAATATCTTCGGATATGTAGGGT 57.643 37.037 0.00 0.00 44.27 4.34
2738 3310 9.137459 AGAATATCTTCGGATATGTAGGGTATG 57.863 37.037 0.00 0.00 44.27 2.39
2739 3311 8.840200 AATATCTTCGGATATGTAGGGTATGT 57.160 34.615 0.00 0.00 44.27 2.29
2740 3312 9.931698 AATATCTTCGGATATGTAGGGTATGTA 57.068 33.333 0.00 0.00 44.27 2.29
2741 3313 9.931698 ATATCTTCGGATATGTAGGGTATGTAA 57.068 33.333 0.00 0.00 43.63 2.41
2742 3314 8.840200 ATCTTCGGATATGTAGGGTATGTAAT 57.160 34.615 0.00 0.00 32.11 1.89
2743 3315 8.063200 TCTTCGGATATGTAGGGTATGTAATG 57.937 38.462 0.00 0.00 0.00 1.90
2744 3316 6.216801 TCGGATATGTAGGGTATGTAATGC 57.783 41.667 0.00 0.00 0.00 3.56
2745 3317 5.041287 CGGATATGTAGGGTATGTAATGCG 58.959 45.833 0.00 0.00 0.00 4.73
2746 3318 5.163591 CGGATATGTAGGGTATGTAATGCGA 60.164 44.000 0.00 0.00 0.00 5.10
2747 3319 6.461092 CGGATATGTAGGGTATGTAATGCGAT 60.461 42.308 0.00 0.00 0.00 4.58
2748 3320 6.701841 GGATATGTAGGGTATGTAATGCGATG 59.298 42.308 0.00 0.00 0.00 3.84
2749 3321 4.948341 TGTAGGGTATGTAATGCGATGT 57.052 40.909 0.00 0.00 0.00 3.06
2750 3322 4.627058 TGTAGGGTATGTAATGCGATGTG 58.373 43.478 0.00 0.00 0.00 3.21
2751 3323 3.838244 AGGGTATGTAATGCGATGTGT 57.162 42.857 0.00 0.00 0.00 3.72
2752 3324 3.466836 AGGGTATGTAATGCGATGTGTG 58.533 45.455 0.00 0.00 0.00 3.82
2753 3325 2.032030 GGGTATGTAATGCGATGTGTGC 60.032 50.000 0.00 0.00 0.00 4.57
2755 3327 3.064682 GGTATGTAATGCGATGTGTGCAA 59.935 43.478 0.00 0.00 46.87 4.08
2756 3328 2.610219 TGTAATGCGATGTGTGCAAC 57.390 45.000 0.00 0.00 46.87 4.17
2771 3343 4.160736 GTGCAACAAACTCATTACCTCC 57.839 45.455 0.00 0.00 36.32 4.30
2772 3344 3.821033 GTGCAACAAACTCATTACCTCCT 59.179 43.478 0.00 0.00 36.32 3.69
2773 3345 4.278419 GTGCAACAAACTCATTACCTCCTT 59.722 41.667 0.00 0.00 36.32 3.36
2774 3346 4.892934 TGCAACAAACTCATTACCTCCTTT 59.107 37.500 0.00 0.00 0.00 3.11
2775 3347 5.221224 TGCAACAAACTCATTACCTCCTTTG 60.221 40.000 0.00 0.00 0.00 2.77
2888 3460 6.865726 CGGTTTTTGTTCATGAATACCATTGA 59.134 34.615 12.12 0.00 31.94 2.57
3122 3695 6.332735 TCTAGGTCCATCAAGAATCATACG 57.667 41.667 0.00 0.00 0.00 3.06
3403 3976 4.682778 AGCCAATACTCTTATTACGCCA 57.317 40.909 0.00 0.00 0.00 5.69
3682 4270 7.339466 AGTTCACCTATTTCAGTTTTCTGTTGT 59.661 33.333 0.00 0.00 46.98 3.32
3942 4557 6.651643 TGATTTCCTTTTCATTTGGATGCTTG 59.348 34.615 0.00 0.00 33.14 4.01
3969 4586 8.084985 TCTTGGGTAATGTCATGATACACTTA 57.915 34.615 0.00 0.00 30.75 2.24
3970 4587 8.544622 TCTTGGGTAATGTCATGATACACTTAA 58.455 33.333 0.00 0.00 30.75 1.85
4007 4624 8.417106 TGGCTTCTTACTTCTCATCTATACAAG 58.583 37.037 0.00 0.00 0.00 3.16
4016 4634 7.177568 ACTTCTCATCTATACAAGTGTGACTGT 59.822 37.037 0.00 0.00 0.00 3.55
4185 4803 5.862924 ACAGGTCATGATTGTTTACTTCG 57.137 39.130 0.00 0.00 0.00 3.79
4258 4876 5.106475 GCCACCTACATTTTTGTCAACGATA 60.106 40.000 0.00 0.00 0.00 2.92
4388 5006 5.553052 ATGTAGGGAAAGGCTGCGTACAG 62.553 52.174 0.00 0.00 45.87 2.74
4413 5031 1.072648 CCCAAAGTGGTCGAACCCTTA 59.927 52.381 0.00 0.00 37.50 2.69
4462 5080 2.917227 ACCGGGCTGCCCTTTTTG 60.917 61.111 33.39 18.31 42.67 2.44
4533 5151 3.618997 GCTGGAGAATCGTTAAAGGGTCA 60.619 47.826 0.00 0.00 34.37 4.02
4566 5185 7.695480 TCTGCATGTTACCTTTAGCATTTTA 57.305 32.000 0.00 0.00 27.18 1.52
4708 5327 3.649023 TCCACCATTACAACACTACACCT 59.351 43.478 0.00 0.00 0.00 4.00
4762 5381 4.116747 ACCAGAGAAGCACTAATCTTCG 57.883 45.455 0.00 0.00 43.40 3.79
4835 5454 5.565637 GCTCCATCTAGAGATTCGTTGCATA 60.566 44.000 0.00 0.00 35.82 3.14
4842 5461 5.536554 AGAGATTCGTTGCATACTTTGTG 57.463 39.130 0.00 0.00 0.00 3.33
5106 5737 8.408043 TTTCTTTCTTCCTTATTTGCTCATCA 57.592 30.769 0.00 0.00 0.00 3.07
5287 5928 5.694231 TCAAAATATTCATGGATGAGCCG 57.306 39.130 0.00 0.00 40.66 5.52
5553 6210 9.921637 CCTGGTTATTAAATTTACTTTCAGCAA 57.078 29.630 0.00 0.00 0.00 3.91
5555 6212 9.418045 TGGTTATTAAATTTACTTTCAGCAAGC 57.582 29.630 0.00 0.00 35.65 4.01
5556 6213 9.418045 GGTTATTAAATTTACTTTCAGCAAGCA 57.582 29.630 0.00 0.00 35.65 3.91
5573 6236 2.715046 AGCATGTACCAACAGTGATGG 58.285 47.619 17.34 17.34 43.84 3.51
5718 6398 6.128553 GCATGTTGTTCTTTGTCGAATCTCTA 60.129 38.462 0.00 0.00 0.00 2.43
5766 7276 1.549203 AAATTCTGCGGCTCACCATT 58.451 45.000 0.00 0.00 34.57 3.16
5821 7331 3.709141 GCAGAAATTCTCCTACTCCCTCT 59.291 47.826 0.00 0.00 0.00 3.69
5822 7332 4.442753 GCAGAAATTCTCCTACTCCCTCTG 60.443 50.000 0.00 0.00 0.00 3.35
5825 7335 4.338795 AATTCTCCTACTCCCTCTGTCA 57.661 45.455 0.00 0.00 0.00 3.58
5826 7336 4.551215 ATTCTCCTACTCCCTCTGTCAT 57.449 45.455 0.00 0.00 0.00 3.06
5828 7338 4.338795 TCTCCTACTCCCTCTGTCATTT 57.661 45.455 0.00 0.00 0.00 2.32
5830 7340 4.026744 CTCCTACTCCCTCTGTCATTTCA 58.973 47.826 0.00 0.00 0.00 2.69
5831 7341 4.425772 TCCTACTCCCTCTGTCATTTCAA 58.574 43.478 0.00 0.00 0.00 2.69
5832 7342 5.032846 TCCTACTCCCTCTGTCATTTCAAT 58.967 41.667 0.00 0.00 0.00 2.57
5834 7344 5.130145 CCTACTCCCTCTGTCATTTCAATCT 59.870 44.000 0.00 0.00 0.00 2.40
5835 7345 6.325028 CCTACTCCCTCTGTCATTTCAATCTA 59.675 42.308 0.00 0.00 0.00 1.98
5836 7346 6.232581 ACTCCCTCTGTCATTTCAATCTAG 57.767 41.667 0.00 0.00 0.00 2.43
5838 7348 6.127196 ACTCCCTCTGTCATTTCAATCTAGAC 60.127 42.308 0.00 0.00 0.00 2.59
5839 7349 5.046529 CCCTCTGTCATTTCAATCTAGACG 58.953 45.833 0.00 0.00 32.08 4.18
5840 7350 5.394663 CCCTCTGTCATTTCAATCTAGACGT 60.395 44.000 0.00 0.00 32.08 4.34
5841 7351 6.183360 CCCTCTGTCATTTCAATCTAGACGTA 60.183 42.308 0.00 0.00 32.08 3.57
5844 7354 9.307121 CTCTGTCATTTCAATCTAGACGTATTT 57.693 33.333 0.00 0.00 32.08 1.40
5845 7355 9.653287 TCTGTCATTTCAATCTAGACGTATTTT 57.347 29.630 0.00 0.00 32.08 1.82
5898 7408 4.503910 TGATGACAAGTATTTCTGGACGG 58.496 43.478 0.00 0.00 0.00 4.79
5899 7409 4.221924 TGATGACAAGTATTTCTGGACGGA 59.778 41.667 0.00 0.00 0.00 4.69
5900 7410 4.188247 TGACAAGTATTTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
5901 7411 3.056107 TGACAAGTATTTCTGGACGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
5902 7412 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
5914 8233 2.618053 GACGGAGGGAGTATGTGTTTG 58.382 52.381 0.00 0.00 0.00 2.93
5956 8279 2.103432 TGTGCCAGAAGAAGGAACGTTA 59.897 45.455 0.00 0.00 37.52 3.18
6035 8358 1.004320 TTAGGCCGCGCTTTCTCAA 60.004 52.632 5.56 0.00 0.00 3.02
6048 8371 4.393062 CGCTTTCTCAATGTGGAACTGTAT 59.607 41.667 0.00 0.00 38.04 2.29
6088 8411 0.593128 CGGCAAACAGTCCCTTCAAG 59.407 55.000 0.00 0.00 0.00 3.02
6104 8436 5.008613 CCCTTCAAGAAAAGTTCACGAATGA 59.991 40.000 0.00 0.00 0.00 2.57
6108 8440 5.008514 TCAAGAAAAGTTCACGAATGATGCA 59.991 36.000 0.00 0.00 33.85 3.96
6109 8441 5.633830 AGAAAAGTTCACGAATGATGCAT 57.366 34.783 0.00 0.00 33.85 3.96
6111 8443 6.546395 AGAAAAGTTCACGAATGATGCATAC 58.454 36.000 0.00 0.00 33.85 2.39
6127 8469 0.036164 ATACTTGCACAACCGCCTCA 59.964 50.000 0.00 0.00 0.00 3.86
6182 8524 5.619132 TCTGAGAACATGCAATCCAGATA 57.381 39.130 0.00 0.00 0.00 1.98
6218 8560 7.926555 CGGGATAACTTAGAACTTGTGATACAT 59.073 37.037 0.00 0.00 0.00 2.29
6310 8652 4.270894 CCATCAACGCGTTACATTACATG 58.729 43.478 26.11 15.81 0.00 3.21
6544 8889 4.020128 ACCTAAGGAAGAGTTGGCAGTAAG 60.020 45.833 0.00 0.00 0.00 2.34
6596 8943 1.542030 AGTAGCAACAGGAGTGACGAG 59.458 52.381 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
479 504 2.959357 GCCACTGCACGAGACAAGC 61.959 63.158 0.00 0.00 37.47 4.01
512 537 1.396301 CTGAACAAGCGCTCCTCAATC 59.604 52.381 12.06 4.49 0.00 2.67
514 539 0.106708 ACTGAACAAGCGCTCCTCAA 59.893 50.000 12.06 0.00 0.00 3.02
531 747 1.394618 GAGAGGTACGGAGCATGACT 58.605 55.000 0.00 0.00 0.00 3.41
534 750 0.824109 TTGGAGAGGTACGGAGCATG 59.176 55.000 0.00 0.00 0.00 4.06
535 751 1.568504 TTTGGAGAGGTACGGAGCAT 58.431 50.000 0.00 0.00 0.00 3.79
539 755 1.619654 TCGTTTTGGAGAGGTACGGA 58.380 50.000 0.00 0.00 33.37 4.69
544 760 3.550030 CGCATTTTTCGTTTTGGAGAGGT 60.550 43.478 0.00 0.00 0.00 3.85
551 767 6.589442 AAAAACAACGCATTTTTCGTTTTG 57.411 29.167 0.00 0.00 46.47 2.44
582 801 5.047188 CACAAAAATAAAACCGTGCCTCTT 58.953 37.500 0.00 0.00 0.00 2.85
598 817 4.358851 CAAAATCGTGCCTCTCACAAAAA 58.641 39.130 0.00 0.00 45.92 1.94
602 821 0.874390 GCAAAATCGTGCCTCTCACA 59.126 50.000 0.00 0.00 45.92 3.58
679 898 2.596346 TGCCTCTCATGGAAGCAAAAA 58.404 42.857 5.35 0.00 38.32 1.94
680 899 2.291209 TGCCTCTCATGGAAGCAAAA 57.709 45.000 5.35 0.00 38.32 2.44
681 900 2.519771 ATGCCTCTCATGGAAGCAAA 57.480 45.000 10.31 0.00 43.54 3.68
682 901 2.747467 GCTATGCCTCTCATGGAAGCAA 60.747 50.000 10.31 2.58 43.54 3.91
683 902 1.202734 GCTATGCCTCTCATGGAAGCA 60.203 52.381 9.11 9.11 44.30 3.91
684 903 1.521580 GCTATGCCTCTCATGGAAGC 58.478 55.000 0.00 0.00 35.89 3.86
685 904 2.181954 GGCTATGCCTCTCATGGAAG 57.818 55.000 0.73 0.00 46.69 3.46
697 916 0.099436 CAGAAAAGGCACGGCTATGC 59.901 55.000 4.36 4.36 45.34 3.14
698 917 1.453155 ACAGAAAAGGCACGGCTATG 58.547 50.000 0.00 0.00 0.00 2.23
699 918 3.055385 TCTTACAGAAAAGGCACGGCTAT 60.055 43.478 0.00 0.00 0.00 2.97
700 919 2.300723 TCTTACAGAAAAGGCACGGCTA 59.699 45.455 0.00 0.00 0.00 3.93
701 920 1.071699 TCTTACAGAAAAGGCACGGCT 59.928 47.619 0.00 0.00 0.00 5.52
702 921 1.464997 CTCTTACAGAAAAGGCACGGC 59.535 52.381 0.00 0.00 0.00 5.68
703 922 2.076863 CCTCTTACAGAAAAGGCACGG 58.923 52.381 0.00 0.00 0.00 4.94
708 927 3.040147 TCGTGCCTCTTACAGAAAAGG 57.960 47.619 0.00 0.00 0.00 3.11
709 928 5.613358 AAATCGTGCCTCTTACAGAAAAG 57.387 39.130 0.00 0.00 0.00 2.27
710 929 6.708949 AGTAAAATCGTGCCTCTTACAGAAAA 59.291 34.615 0.00 0.00 0.00 2.29
711 930 6.228258 AGTAAAATCGTGCCTCTTACAGAAA 58.772 36.000 0.00 0.00 0.00 2.52
712 931 5.790593 AGTAAAATCGTGCCTCTTACAGAA 58.209 37.500 0.00 0.00 0.00 3.02
713 932 5.401531 AGTAAAATCGTGCCTCTTACAGA 57.598 39.130 0.00 0.00 0.00 3.41
714 933 6.481954 AAAGTAAAATCGTGCCTCTTACAG 57.518 37.500 0.00 0.00 0.00 2.74
715 934 5.119588 CGAAAGTAAAATCGTGCCTCTTACA 59.880 40.000 0.00 0.00 34.48 2.41
716 935 5.548250 CGAAAGTAAAATCGTGCCTCTTAC 58.452 41.667 0.00 0.00 34.48 2.34
717 936 5.773239 CGAAAGTAAAATCGTGCCTCTTA 57.227 39.130 0.00 0.00 34.48 2.10
718 937 4.663636 CGAAAGTAAAATCGTGCCTCTT 57.336 40.909 0.00 0.00 34.48 2.85
739 958 5.239525 ACAGAAGTAAAATTGTGCCTCTCAC 59.760 40.000 0.00 0.00 45.82 3.51
740 959 5.376625 ACAGAAGTAAAATTGTGCCTCTCA 58.623 37.500 0.00 0.00 0.00 3.27
741 960 5.948992 ACAGAAGTAAAATTGTGCCTCTC 57.051 39.130 0.00 0.00 0.00 3.20
742 961 7.817418 TTTACAGAAGTAAAATTGTGCCTCT 57.183 32.000 0.00 0.00 44.78 3.69
753 972 8.339714 CACGGTCATTTCTTTTACAGAAGTAAA 58.660 33.333 0.00 0.00 45.75 2.01
754 973 7.519328 GCACGGTCATTTCTTTTACAGAAGTAA 60.519 37.037 0.00 0.00 42.76 2.24
755 974 6.073440 GCACGGTCATTTCTTTTACAGAAGTA 60.073 38.462 0.00 0.00 42.76 2.24
756 975 5.277828 GCACGGTCATTTCTTTTACAGAAGT 60.278 40.000 0.00 0.00 42.76 3.01
757 976 5.147162 GCACGGTCATTTCTTTTACAGAAG 58.853 41.667 0.00 0.00 42.76 2.85
758 977 4.023536 GGCACGGTCATTTCTTTTACAGAA 60.024 41.667 0.00 0.00 39.99 3.02
759 978 3.500680 GGCACGGTCATTTCTTTTACAGA 59.499 43.478 0.00 0.00 0.00 3.41
760 979 3.502211 AGGCACGGTCATTTCTTTTACAG 59.498 43.478 0.00 0.00 0.00 2.74
761 980 3.482436 AGGCACGGTCATTTCTTTTACA 58.518 40.909 0.00 0.00 0.00 2.41
762 981 3.751698 AGAGGCACGGTCATTTCTTTTAC 59.248 43.478 0.00 0.00 0.00 2.01
763 982 4.000988 GAGAGGCACGGTCATTTCTTTTA 58.999 43.478 0.00 0.00 0.00 1.52
764 983 2.814336 GAGAGGCACGGTCATTTCTTTT 59.186 45.455 0.00 0.00 0.00 2.27
765 984 2.427506 GAGAGGCACGGTCATTTCTTT 58.572 47.619 0.00 0.00 0.00 2.52
766 985 1.673033 CGAGAGGCACGGTCATTTCTT 60.673 52.381 0.00 0.00 0.00 2.52
767 986 0.108615 CGAGAGGCACGGTCATTTCT 60.109 55.000 0.00 0.00 0.00 2.52
768 987 0.108804 TCGAGAGGCACGGTCATTTC 60.109 55.000 0.00 0.00 0.00 2.17
769 988 0.320374 TTCGAGAGGCACGGTCATTT 59.680 50.000 0.00 0.00 0.00 2.32
770 989 0.320374 TTTCGAGAGGCACGGTCATT 59.680 50.000 0.00 0.00 0.00 2.57
771 990 0.389948 GTTTCGAGAGGCACGGTCAT 60.390 55.000 0.00 0.00 0.00 3.06
772 991 1.006571 GTTTCGAGAGGCACGGTCA 60.007 57.895 0.00 0.00 0.00 4.02
773 992 0.599204 TTGTTTCGAGAGGCACGGTC 60.599 55.000 0.00 0.00 0.00 4.79
774 993 0.179067 TTTGTTTCGAGAGGCACGGT 60.179 50.000 0.00 0.00 0.00 4.83
775 994 0.941542 TTTTGTTTCGAGAGGCACGG 59.058 50.000 0.00 0.00 0.00 4.94
776 995 2.748461 TTTTTGTTTCGAGAGGCACG 57.252 45.000 0.00 0.00 0.00 5.34
839 1058 0.684479 ACATCTGAGAGGCACGGCTA 60.684 55.000 0.00 0.00 0.00 3.93
842 1061 1.226802 CGACATCTGAGAGGCACGG 60.227 63.158 0.00 0.00 0.00 4.94
850 1069 0.034059 GTATGGGGGCGACATCTGAG 59.966 60.000 0.00 0.00 0.00 3.35
852 1071 0.034059 GAGTATGGGGGCGACATCTG 59.966 60.000 0.00 0.00 0.00 2.90
856 1075 2.766651 GGGAGTATGGGGGCGACA 60.767 66.667 0.00 0.00 0.00 4.35
857 1076 2.446036 AGGGAGTATGGGGGCGAC 60.446 66.667 0.00 0.00 0.00 5.19
858 1077 2.445845 CAGGGAGTATGGGGGCGA 60.446 66.667 0.00 0.00 0.00 5.54
859 1078 4.256180 GCAGGGAGTATGGGGGCG 62.256 72.222 0.00 0.00 0.00 6.13
860 1079 1.937924 AAAGCAGGGAGTATGGGGGC 61.938 60.000 0.00 0.00 0.00 5.80
861 1080 0.631212 AAAAGCAGGGAGTATGGGGG 59.369 55.000 0.00 0.00 0.00 5.40
862 1081 1.686115 CCAAAAGCAGGGAGTATGGGG 60.686 57.143 0.00 0.00 0.00 4.96
863 1082 1.284785 TCCAAAAGCAGGGAGTATGGG 59.715 52.381 0.00 0.00 0.00 4.00
864 1083 2.648059 CTCCAAAAGCAGGGAGTATGG 58.352 52.381 0.00 0.00 44.59 2.74
949 1388 2.433838 CTCAGTGAGTGCTGGGCG 60.434 66.667 12.28 0.00 37.12 6.13
958 1397 1.627297 GGGGTTAGGGCCTCAGTGAG 61.627 65.000 10.74 13.56 0.00 3.51
1301 1740 9.454859 CTAAGTGAAATTTAGGGAGAAACTGAT 57.545 33.333 0.00 0.00 33.03 2.90
1496 1946 8.846943 TTTGTTACAATATGAAGAGAGCAGAA 57.153 30.769 0.00 0.00 0.00 3.02
1568 2031 8.655651 AAAGAACACACACAAAAGAAGAAAAA 57.344 26.923 0.00 0.00 0.00 1.94
1570 2033 7.540745 GCTAAAGAACACACACAAAAGAAGAAA 59.459 33.333 0.00 0.00 0.00 2.52
1572 2035 6.374333 AGCTAAAGAACACACACAAAAGAAGA 59.626 34.615 0.00 0.00 0.00 2.87
1573 2036 6.555315 AGCTAAAGAACACACACAAAAGAAG 58.445 36.000 0.00 0.00 0.00 2.85
1574 2037 6.509418 AGCTAAAGAACACACACAAAAGAA 57.491 33.333 0.00 0.00 0.00 2.52
1698 2174 3.058914 CCATCCTATCGAAAAATGACGCC 60.059 47.826 0.00 0.00 0.00 5.68
1812 2383 2.354510 CGACCTGTTCTGCTGAAAAACA 59.645 45.455 7.68 2.22 33.52 2.83
1837 2408 1.342374 GCCCCAAATCATCTGAAGGGT 60.342 52.381 12.12 0.00 34.71 4.34
1854 2425 6.094881 GCTATTTTCCAAAATAAAAAGGGCCC 59.905 38.462 16.46 16.46 39.57 5.80
1855 2426 6.657117 TGCTATTTTCCAAAATAAAAAGGGCC 59.343 34.615 0.00 0.00 39.57 5.80
1970 2542 4.398988 TGGAATACTTGGCATGCTAACAAG 59.601 41.667 24.77 24.77 45.27 3.16
2197 2769 5.382618 AATCCAAAGCTGTCTTGTCAATC 57.617 39.130 0.00 0.00 31.78 2.67
2335 2907 9.734620 CATGTTGAAGACAAAAACAGAATTAGA 57.265 29.630 0.00 0.00 42.62 2.10
2336 2908 9.734620 TCATGTTGAAGACAAAAACAGAATTAG 57.265 29.630 0.00 0.00 42.62 1.73
2338 2910 8.872845 GTTCATGTTGAAGACAAAAACAGAATT 58.127 29.630 0.00 0.00 42.62 2.17
2339 2911 7.220683 CGTTCATGTTGAAGACAAAAACAGAAT 59.779 33.333 0.00 0.00 42.62 2.40
2340 2912 6.526325 CGTTCATGTTGAAGACAAAAACAGAA 59.474 34.615 0.00 0.00 42.62 3.02
2341 2913 6.027131 CGTTCATGTTGAAGACAAAAACAGA 58.973 36.000 0.00 0.00 42.62 3.41
2342 2914 6.027131 TCGTTCATGTTGAAGACAAAAACAG 58.973 36.000 0.00 0.00 42.62 3.16
2343 2915 5.944013 TCGTTCATGTTGAAGACAAAAACA 58.056 33.333 0.00 0.00 42.62 2.83
2344 2916 6.862944 TTCGTTCATGTTGAAGACAAAAAC 57.137 33.333 0.00 0.00 42.62 2.43
2345 2917 8.472683 AAATTCGTTCATGTTGAAGACAAAAA 57.527 26.923 0.00 0.00 42.62 1.94
2346 2918 9.574458 TTAAATTCGTTCATGTTGAAGACAAAA 57.426 25.926 0.00 0.00 42.62 2.44
2347 2919 9.015577 GTTAAATTCGTTCATGTTGAAGACAAA 57.984 29.630 0.00 0.00 42.62 2.83
2348 2920 8.402472 AGTTAAATTCGTTCATGTTGAAGACAA 58.598 29.630 0.00 0.00 42.62 3.18
2349 2921 7.925993 AGTTAAATTCGTTCATGTTGAAGACA 58.074 30.769 0.00 0.00 43.71 3.41
2350 2922 9.872757 TTAGTTAAATTCGTTCATGTTGAAGAC 57.127 29.630 0.00 0.00 37.00 3.01
2374 2946 9.088512 GCGAATAAAGTCTCAAGAGAAGATTTA 57.911 33.333 0.57 8.18 39.48 1.40
2375 2947 7.821846 AGCGAATAAAGTCTCAAGAGAAGATTT 59.178 33.333 0.57 6.43 39.48 2.17
2376 2948 7.327214 AGCGAATAAAGTCTCAAGAGAAGATT 58.673 34.615 0.57 0.78 39.48 2.40
2377 2949 6.872920 AGCGAATAAAGTCTCAAGAGAAGAT 58.127 36.000 0.57 0.00 39.48 2.40
2378 2950 6.274157 AGCGAATAAAGTCTCAAGAGAAGA 57.726 37.500 0.57 0.00 39.48 2.87
2379 2951 7.219917 CACTAGCGAATAAAGTCTCAAGAGAAG 59.780 40.741 0.57 0.00 39.48 2.85
2380 2952 7.030165 CACTAGCGAATAAAGTCTCAAGAGAA 58.970 38.462 0.57 0.00 39.48 2.87
2381 2953 6.556212 CACTAGCGAATAAAGTCTCAAGAGA 58.444 40.000 0.00 0.00 34.56 3.10
2382 2954 5.231147 GCACTAGCGAATAAAGTCTCAAGAG 59.769 44.000 0.00 0.00 0.00 2.85
2383 2955 5.103000 GCACTAGCGAATAAAGTCTCAAGA 58.897 41.667 0.00 0.00 0.00 3.02
2384 2956 5.382573 GCACTAGCGAATAAAGTCTCAAG 57.617 43.478 0.00 0.00 0.00 3.02
2399 2971 4.152625 CCGCTTGCACGCACTAGC 62.153 66.667 16.08 5.85 37.42 3.42
2400 2972 1.841663 AAACCGCTTGCACGCACTAG 61.842 55.000 16.08 3.19 0.00 2.57
2401 2973 1.440938 AAAACCGCTTGCACGCACTA 61.441 50.000 16.08 0.00 0.00 2.74
2402 2974 2.278182 AAAAACCGCTTGCACGCACT 62.278 50.000 16.08 0.00 0.00 4.40
2403 2975 1.876263 AAAAACCGCTTGCACGCAC 60.876 52.632 16.08 0.00 0.00 5.34
2404 2976 1.875813 CAAAAACCGCTTGCACGCA 60.876 52.632 16.08 0.00 0.00 5.24
2405 2977 1.417577 AACAAAAACCGCTTGCACGC 61.418 50.000 4.85 4.85 0.00 5.34
2406 2978 0.570272 GAACAAAAACCGCTTGCACG 59.430 50.000 0.00 0.00 0.00 5.34
2407 2979 1.634702 TGAACAAAAACCGCTTGCAC 58.365 45.000 0.00 0.00 0.00 4.57
2408 2980 2.159184 TCATGAACAAAAACCGCTTGCA 60.159 40.909 0.00 0.00 0.00 4.08
2409 2981 2.468831 TCATGAACAAAAACCGCTTGC 58.531 42.857 0.00 0.00 0.00 4.01
2410 2982 5.118510 GGTATTCATGAACAAAAACCGCTTG 59.881 40.000 11.07 0.00 0.00 4.01
2411 2983 5.221342 TGGTATTCATGAACAAAAACCGCTT 60.221 36.000 11.07 0.00 0.00 4.68
2412 2984 4.279671 TGGTATTCATGAACAAAAACCGCT 59.720 37.500 11.07 0.00 0.00 5.52
2413 2985 4.551388 TGGTATTCATGAACAAAAACCGC 58.449 39.130 11.07 0.00 0.00 5.68
2414 2986 6.865726 TCAATGGTATTCATGAACAAAAACCG 59.134 34.615 11.07 2.51 35.99 4.44
2415 2987 8.776376 ATCAATGGTATTCATGAACAAAAACC 57.224 30.769 11.07 13.20 35.99 3.27
2416 2988 9.643693 AGATCAATGGTATTCATGAACAAAAAC 57.356 29.630 11.07 4.46 35.99 2.43
2421 2993 9.904198 TCTTTAGATCAATGGTATTCATGAACA 57.096 29.630 11.07 4.92 35.99 3.18
2423 2995 9.045223 CGTCTTTAGATCAATGGTATTCATGAA 57.955 33.333 11.26 11.26 35.99 2.57
2424 2996 7.657354 CCGTCTTTAGATCAATGGTATTCATGA 59.343 37.037 0.00 0.00 35.99 3.07
2425 2997 7.442364 ACCGTCTTTAGATCAATGGTATTCATG 59.558 37.037 0.00 0.00 35.99 3.07
2426 2998 7.509546 ACCGTCTTTAGATCAATGGTATTCAT 58.490 34.615 0.00 0.00 37.79 2.57
2427 2999 6.884832 ACCGTCTTTAGATCAATGGTATTCA 58.115 36.000 0.00 0.00 0.00 2.57
2428 3000 7.787725 AACCGTCTTTAGATCAATGGTATTC 57.212 36.000 0.00 0.00 0.00 1.75
2432 3004 9.326413 CTTTATAACCGTCTTTAGATCAATGGT 57.674 33.333 0.00 0.00 0.00 3.55
2433 3005 8.283291 GCTTTATAACCGTCTTTAGATCAATGG 58.717 37.037 0.00 0.00 0.00 3.16
2434 3006 8.826710 TGCTTTATAACCGTCTTTAGATCAATG 58.173 33.333 0.00 0.00 0.00 2.82
2435 3007 8.958119 TGCTTTATAACCGTCTTTAGATCAAT 57.042 30.769 0.00 0.00 0.00 2.57
2436 3008 8.826710 CATGCTTTATAACCGTCTTTAGATCAA 58.173 33.333 0.00 0.00 0.00 2.57
2437 3009 7.985184 ACATGCTTTATAACCGTCTTTAGATCA 59.015 33.333 0.00 0.00 0.00 2.92
2438 3010 8.366671 ACATGCTTTATAACCGTCTTTAGATC 57.633 34.615 0.00 0.00 0.00 2.75
2439 3011 9.477484 CTACATGCTTTATAACCGTCTTTAGAT 57.523 33.333 0.00 0.00 0.00 1.98
2440 3012 7.437267 GCTACATGCTTTATAACCGTCTTTAGA 59.563 37.037 0.00 0.00 38.95 2.10
2441 3013 7.564988 GCTACATGCTTTATAACCGTCTTTAG 58.435 38.462 0.00 0.00 38.95 1.85
2442 3014 7.473027 GCTACATGCTTTATAACCGTCTTTA 57.527 36.000 0.00 0.00 38.95 1.85
2443 3015 6.359480 GCTACATGCTTTATAACCGTCTTT 57.641 37.500 0.00 0.00 38.95 2.52
2444 3016 5.986004 GCTACATGCTTTATAACCGTCTT 57.014 39.130 0.00 0.00 38.95 3.01
2465 3037 2.605580 GGAGTTAGTGCAAGCAACAAGC 60.606 50.000 0.00 0.00 46.19 4.01
2466 3038 2.349817 CGGAGTTAGTGCAAGCAACAAG 60.350 50.000 0.00 0.00 0.00 3.16
2467 3039 1.601903 CGGAGTTAGTGCAAGCAACAA 59.398 47.619 0.00 0.00 0.00 2.83
2468 3040 1.225855 CGGAGTTAGTGCAAGCAACA 58.774 50.000 0.00 0.00 0.00 3.33
2469 3041 0.517316 CCGGAGTTAGTGCAAGCAAC 59.483 55.000 0.00 0.00 0.00 4.17
2470 3042 0.394938 TCCGGAGTTAGTGCAAGCAA 59.605 50.000 0.00 0.00 0.00 3.91
2471 3043 0.394938 TTCCGGAGTTAGTGCAAGCA 59.605 50.000 3.34 0.00 0.00 3.91
2472 3044 1.079503 CTTCCGGAGTTAGTGCAAGC 58.920 55.000 3.34 0.00 0.00 4.01
2473 3045 2.288825 TGACTTCCGGAGTTAGTGCAAG 60.289 50.000 12.00 2.22 39.19 4.01
2474 3046 1.689813 TGACTTCCGGAGTTAGTGCAA 59.310 47.619 12.00 0.00 39.19 4.08
2475 3047 1.334160 TGACTTCCGGAGTTAGTGCA 58.666 50.000 12.00 7.26 39.19 4.57
2476 3048 2.673368 CAATGACTTCCGGAGTTAGTGC 59.327 50.000 12.00 4.99 39.19 4.40
2477 3049 3.926616 ACAATGACTTCCGGAGTTAGTG 58.073 45.455 12.00 15.63 43.21 2.74
2478 3050 4.618920 AACAATGACTTCCGGAGTTAGT 57.381 40.909 7.00 7.00 39.19 2.24
2479 3051 4.378459 GCAAACAATGACTTCCGGAGTTAG 60.378 45.833 3.34 1.34 39.19 2.34
2480 3052 3.500680 GCAAACAATGACTTCCGGAGTTA 59.499 43.478 3.34 2.50 39.19 2.24
2481 3053 2.293399 GCAAACAATGACTTCCGGAGTT 59.707 45.455 3.34 0.00 39.19 3.01
2482 3054 1.880027 GCAAACAATGACTTCCGGAGT 59.120 47.619 3.34 5.13 42.70 3.85
2483 3055 1.879380 TGCAAACAATGACTTCCGGAG 59.121 47.619 3.34 1.34 0.00 4.63
2484 3056 1.606668 GTGCAAACAATGACTTCCGGA 59.393 47.619 0.00 0.00 0.00 5.14
2485 3057 1.336440 TGTGCAAACAATGACTTCCGG 59.664 47.619 0.00 0.00 0.00 5.14
2486 3058 2.223456 TGTGTGCAAACAATGACTTCCG 60.223 45.455 7.42 0.00 0.00 4.30
2487 3059 3.181487 ACTGTGTGCAAACAATGACTTCC 60.181 43.478 11.68 0.00 0.00 3.46
2488 3060 4.032703 ACTGTGTGCAAACAATGACTTC 57.967 40.909 11.68 0.00 0.00 3.01
2489 3061 3.696051 AGACTGTGTGCAAACAATGACTT 59.304 39.130 11.68 0.00 0.00 3.01
2490 3062 3.065786 CAGACTGTGTGCAAACAATGACT 59.934 43.478 11.68 3.39 0.00 3.41
2491 3063 3.365832 CAGACTGTGTGCAAACAATGAC 58.634 45.455 11.68 0.95 0.00 3.06
2492 3064 2.358582 CCAGACTGTGTGCAAACAATGA 59.641 45.455 11.68 0.00 0.00 2.57
2493 3065 2.734670 CCAGACTGTGTGCAAACAATG 58.265 47.619 11.68 9.96 0.00 2.82
2494 3066 1.067516 GCCAGACTGTGTGCAAACAAT 59.932 47.619 11.68 0.00 0.00 2.71
2495 3067 0.455410 GCCAGACTGTGTGCAAACAA 59.545 50.000 11.68 0.00 0.00 2.83
2496 3068 0.679321 TGCCAGACTGTGTGCAAACA 60.679 50.000 9.91 9.91 31.68 2.83
2497 3069 0.029834 CTGCCAGACTGTGTGCAAAC 59.970 55.000 0.00 0.00 33.56 2.93
2498 3070 1.102809 CCTGCCAGACTGTGTGCAAA 61.103 55.000 0.93 0.00 33.56 3.68
2499 3071 1.526686 CCTGCCAGACTGTGTGCAA 60.527 57.895 0.93 0.00 33.56 4.08
2500 3072 2.111669 CCTGCCAGACTGTGTGCA 59.888 61.111 0.93 3.31 33.10 4.57
2501 3073 3.360340 GCCTGCCAGACTGTGTGC 61.360 66.667 0.93 0.00 0.00 4.57
2502 3074 0.892358 AATGCCTGCCAGACTGTGTG 60.892 55.000 0.93 0.00 0.00 3.82
2503 3075 0.892358 CAATGCCTGCCAGACTGTGT 60.892 55.000 0.93 0.00 0.00 3.72
2504 3076 0.892358 ACAATGCCTGCCAGACTGTG 60.892 55.000 0.93 0.00 0.00 3.66
2505 3077 0.178981 AACAATGCCTGCCAGACTGT 60.179 50.000 0.93 0.00 0.00 3.55
2506 3078 0.524862 GAACAATGCCTGCCAGACTG 59.475 55.000 0.00 0.00 0.00 3.51
2507 3079 0.957395 CGAACAATGCCTGCCAGACT 60.957 55.000 0.00 0.00 0.00 3.24
2508 3080 1.503542 CGAACAATGCCTGCCAGAC 59.496 57.895 0.00 0.00 0.00 3.51
2509 3081 2.334946 GCGAACAATGCCTGCCAGA 61.335 57.895 0.00 0.00 0.00 3.86
2510 3082 2.180017 GCGAACAATGCCTGCCAG 59.820 61.111 0.00 0.00 0.00 4.85
2511 3083 2.596923 TGCGAACAATGCCTGCCA 60.597 55.556 0.00 0.00 0.00 4.92
2512 3084 2.126346 GTGCGAACAATGCCTGCC 60.126 61.111 0.00 0.00 0.00 4.85
2513 3085 1.154150 GAGTGCGAACAATGCCTGC 60.154 57.895 0.00 0.00 0.00 4.85
2514 3086 0.445436 GAGAGTGCGAACAATGCCTG 59.555 55.000 0.00 0.00 0.00 4.85
2515 3087 0.674895 GGAGAGTGCGAACAATGCCT 60.675 55.000 0.00 0.00 0.00 4.75
2516 3088 1.648467 GGGAGAGTGCGAACAATGCC 61.648 60.000 0.00 0.00 0.00 4.40
2517 3089 0.955428 TGGGAGAGTGCGAACAATGC 60.955 55.000 0.00 0.00 0.00 3.56
2518 3090 1.081892 CTGGGAGAGTGCGAACAATG 58.918 55.000 0.00 0.00 0.00 2.82
2519 3091 0.674895 GCTGGGAGAGTGCGAACAAT 60.675 55.000 0.00 0.00 0.00 2.71
2520 3092 1.301716 GCTGGGAGAGTGCGAACAA 60.302 57.895 0.00 0.00 0.00 2.83
2521 3093 1.758440 AAGCTGGGAGAGTGCGAACA 61.758 55.000 0.00 0.00 0.00 3.18
2522 3094 0.603975 AAAGCTGGGAGAGTGCGAAC 60.604 55.000 0.00 0.00 0.00 3.95
2523 3095 0.973632 TAAAGCTGGGAGAGTGCGAA 59.026 50.000 0.00 0.00 0.00 4.70
2524 3096 0.246635 GTAAAGCTGGGAGAGTGCGA 59.753 55.000 0.00 0.00 0.00 5.10
2525 3097 0.037326 TGTAAAGCTGGGAGAGTGCG 60.037 55.000 0.00 0.00 0.00 5.34
2526 3098 2.185004 TTGTAAAGCTGGGAGAGTGC 57.815 50.000 0.00 0.00 0.00 4.40
2527 3099 5.491982 ACTATTTGTAAAGCTGGGAGAGTG 58.508 41.667 0.00 0.00 0.00 3.51
2528 3100 5.763876 ACTATTTGTAAAGCTGGGAGAGT 57.236 39.130 0.00 0.00 0.00 3.24
2529 3101 7.113658 TCTACTATTTGTAAAGCTGGGAGAG 57.886 40.000 0.00 0.00 0.00 3.20
2530 3102 7.490657 TTCTACTATTTGTAAAGCTGGGAGA 57.509 36.000 0.00 0.00 0.00 3.71
2531 3103 8.738645 AATTCTACTATTTGTAAAGCTGGGAG 57.261 34.615 0.00 0.00 0.00 4.30
2597 3169 8.805175 TCAATACCAACAAGATGATTCAAACAT 58.195 29.630 0.00 0.00 0.00 2.71
2598 3170 8.175925 TCAATACCAACAAGATGATTCAAACA 57.824 30.769 0.00 0.00 0.00 2.83
2599 3171 9.132521 CTTCAATACCAACAAGATGATTCAAAC 57.867 33.333 0.00 0.00 0.00 2.93
2600 3172 8.306038 CCTTCAATACCAACAAGATGATTCAAA 58.694 33.333 0.00 0.00 0.00 2.69
2601 3173 7.451255 ACCTTCAATACCAACAAGATGATTCAA 59.549 33.333 0.00 0.00 0.00 2.69
2602 3174 6.947733 ACCTTCAATACCAACAAGATGATTCA 59.052 34.615 0.00 0.00 0.00 2.57
2603 3175 7.396540 ACCTTCAATACCAACAAGATGATTC 57.603 36.000 0.00 0.00 0.00 2.52
2604 3176 8.109634 AGTACCTTCAATACCAACAAGATGATT 58.890 33.333 0.00 0.00 0.00 2.57
2605 3177 7.633789 AGTACCTTCAATACCAACAAGATGAT 58.366 34.615 0.00 0.00 0.00 2.45
2606 3178 7.016153 AGTACCTTCAATACCAACAAGATGA 57.984 36.000 0.00 0.00 0.00 2.92
2607 3179 7.822334 TGTAGTACCTTCAATACCAACAAGATG 59.178 37.037 0.00 0.00 0.00 2.90
2608 3180 7.822822 GTGTAGTACCTTCAATACCAACAAGAT 59.177 37.037 0.00 0.00 0.00 2.40
2609 3181 7.015877 AGTGTAGTACCTTCAATACCAACAAGA 59.984 37.037 0.00 0.00 0.00 3.02
2610 3182 7.117812 CAGTGTAGTACCTTCAATACCAACAAG 59.882 40.741 0.00 0.00 0.00 3.16
2611 3183 6.932400 CAGTGTAGTACCTTCAATACCAACAA 59.068 38.462 0.00 0.00 0.00 2.83
2612 3184 6.460781 CAGTGTAGTACCTTCAATACCAACA 58.539 40.000 0.00 0.00 0.00 3.33
2613 3185 5.873164 CCAGTGTAGTACCTTCAATACCAAC 59.127 44.000 0.00 0.00 0.00 3.77
2614 3186 5.781306 TCCAGTGTAGTACCTTCAATACCAA 59.219 40.000 0.00 0.00 0.00 3.67
2615 3187 5.335261 TCCAGTGTAGTACCTTCAATACCA 58.665 41.667 0.00 0.00 0.00 3.25
2616 3188 5.927281 TCCAGTGTAGTACCTTCAATACC 57.073 43.478 0.00 0.00 0.00 2.73
2617 3189 8.305317 GGATATCCAGTGTAGTACCTTCAATAC 58.695 40.741 17.34 0.00 35.64 1.89
2618 3190 7.453752 GGGATATCCAGTGTAGTACCTTCAATA 59.546 40.741 23.27 0.00 37.91 1.90
2619 3191 6.270231 GGGATATCCAGTGTAGTACCTTCAAT 59.730 42.308 23.27 0.00 37.91 2.57
2620 3192 5.601313 GGGATATCCAGTGTAGTACCTTCAA 59.399 44.000 23.27 0.00 37.91 2.69
2621 3193 5.145564 GGGATATCCAGTGTAGTACCTTCA 58.854 45.833 23.27 0.00 37.91 3.02
2622 3194 5.145564 TGGGATATCCAGTGTAGTACCTTC 58.854 45.833 23.27 1.31 41.46 3.46
2623 3195 5.152306 TGGGATATCCAGTGTAGTACCTT 57.848 43.478 23.27 0.00 41.46 3.50
2624 3196 4.827036 TGGGATATCCAGTGTAGTACCT 57.173 45.455 23.27 0.00 41.46 3.08
2634 3206 8.701676 TGGACCTAGATCCTTGGGATATCCAG 62.702 50.000 23.27 12.56 43.27 3.86
2635 3207 4.512942 GGACCTAGATCCTTGGGATATCCA 60.513 50.000 23.27 6.92 43.27 3.41
2636 3208 4.034410 GGACCTAGATCCTTGGGATATCC 58.966 52.174 13.87 13.87 43.27 2.59
2637 3209 4.689062 TGGACCTAGATCCTTGGGATATC 58.311 47.826 4.30 0.00 43.27 1.63
2638 3210 4.785173 TGGACCTAGATCCTTGGGATAT 57.215 45.455 4.30 0.00 43.27 1.63
2639 3211 4.109600 TGATGGACCTAGATCCTTGGGATA 59.890 45.833 4.30 0.00 43.27 2.59
2640 3212 3.116199 TGATGGACCTAGATCCTTGGGAT 60.116 47.826 4.30 0.00 46.28 3.85
2641 3213 2.250008 TGATGGACCTAGATCCTTGGGA 59.750 50.000 4.30 0.00 39.75 4.37
2642 3214 2.694397 TGATGGACCTAGATCCTTGGG 58.306 52.381 4.30 0.00 39.75 4.12
2643 3215 3.969976 TCTTGATGGACCTAGATCCTTGG 59.030 47.826 4.30 0.00 39.75 3.61
2644 3216 5.620738 TTCTTGATGGACCTAGATCCTTG 57.379 43.478 4.30 0.00 39.75 3.61
2645 3217 5.907662 TGATTCTTGATGGACCTAGATCCTT 59.092 40.000 4.30 0.00 39.75 3.36
2646 3218 5.471424 TGATTCTTGATGGACCTAGATCCT 58.529 41.667 4.30 0.00 39.75 3.24
2647 3219 5.815233 TGATTCTTGATGGACCTAGATCC 57.185 43.478 0.00 0.00 39.45 3.36
2648 3220 7.327214 GGTATGATTCTTGATGGACCTAGATC 58.673 42.308 0.00 0.00 0.00 2.75
2649 3221 6.071108 CGGTATGATTCTTGATGGACCTAGAT 60.071 42.308 0.00 0.00 0.00 1.98
2650 3222 5.243954 CGGTATGATTCTTGATGGACCTAGA 59.756 44.000 0.00 0.00 0.00 2.43
2651 3223 5.011125 ACGGTATGATTCTTGATGGACCTAG 59.989 44.000 0.00 0.00 0.00 3.02
2652 3224 4.899457 ACGGTATGATTCTTGATGGACCTA 59.101 41.667 0.00 0.00 0.00 3.08
2653 3225 3.711704 ACGGTATGATTCTTGATGGACCT 59.288 43.478 0.00 0.00 0.00 3.85
2654 3226 4.073293 ACGGTATGATTCTTGATGGACC 57.927 45.455 0.00 0.00 0.00 4.46
2655 3227 5.006746 GTGAACGGTATGATTCTTGATGGAC 59.993 44.000 0.00 0.00 0.00 4.02
2656 3228 5.116180 GTGAACGGTATGATTCTTGATGGA 58.884 41.667 0.00 0.00 0.00 3.41
2657 3229 4.875536 TGTGAACGGTATGATTCTTGATGG 59.124 41.667 0.00 0.00 0.00 3.51
2658 3230 6.609237 ATGTGAACGGTATGATTCTTGATG 57.391 37.500 0.00 0.00 0.00 3.07
2659 3231 7.726216 TCTATGTGAACGGTATGATTCTTGAT 58.274 34.615 0.00 0.00 0.00 2.57
2660 3232 7.107639 TCTATGTGAACGGTATGATTCTTGA 57.892 36.000 0.00 0.00 0.00 3.02
2661 3233 7.953158 ATCTATGTGAACGGTATGATTCTTG 57.047 36.000 0.00 0.00 0.00 3.02
2671 3243 9.698309 CATCTTTTCTATATCTATGTGAACGGT 57.302 33.333 0.00 0.00 0.00 4.83
2672 3244 9.698309 ACATCTTTTCTATATCTATGTGAACGG 57.302 33.333 0.00 0.00 0.00 4.44
2699 3271 9.035890 TCCGAAGATATTCTATCCACATATGTT 57.964 33.333 5.37 0.00 0.00 2.71
2700 3272 8.595362 TCCGAAGATATTCTATCCACATATGT 57.405 34.615 1.41 1.41 0.00 2.29
2704 3276 9.206690 ACATATCCGAAGATATTCTATCCACAT 57.793 33.333 0.00 0.00 42.00 3.21
2705 3277 8.595362 ACATATCCGAAGATATTCTATCCACA 57.405 34.615 0.00 0.00 42.00 4.17
2707 3279 9.355916 CCTACATATCCGAAGATATTCTATCCA 57.644 37.037 0.00 0.00 42.00 3.41
2708 3280 8.798402 CCCTACATATCCGAAGATATTCTATCC 58.202 40.741 0.00 0.00 42.00 2.59
2709 3281 9.357161 ACCCTACATATCCGAAGATATTCTATC 57.643 37.037 0.00 0.00 42.00 2.08
2712 3284 9.137459 CATACCCTACATATCCGAAGATATTCT 57.863 37.037 0.00 0.00 42.00 2.40
2713 3285 8.915036 ACATACCCTACATATCCGAAGATATTC 58.085 37.037 0.00 0.00 42.00 1.75
2714 3286 8.840200 ACATACCCTACATATCCGAAGATATT 57.160 34.615 0.00 0.00 42.00 1.28
2715 3287 9.931698 TTACATACCCTACATATCCGAAGATAT 57.068 33.333 0.00 0.00 44.92 1.63
2716 3288 9.931698 ATTACATACCCTACATATCCGAAGATA 57.068 33.333 0.00 0.00 39.31 1.98
2717 3289 8.696374 CATTACATACCCTACATATCCGAAGAT 58.304 37.037 0.00 0.00 36.44 2.40
2718 3290 7.363530 GCATTACATACCCTACATATCCGAAGA 60.364 40.741 0.00 0.00 0.00 2.87
2719 3291 6.757010 GCATTACATACCCTACATATCCGAAG 59.243 42.308 0.00 0.00 0.00 3.79
2720 3292 6.626402 CGCATTACATACCCTACATATCCGAA 60.626 42.308 0.00 0.00 0.00 4.30
2721 3293 5.163591 CGCATTACATACCCTACATATCCGA 60.164 44.000 0.00 0.00 0.00 4.55
2722 3294 5.041287 CGCATTACATACCCTACATATCCG 58.959 45.833 0.00 0.00 0.00 4.18
2723 3295 6.216801 TCGCATTACATACCCTACATATCC 57.783 41.667 0.00 0.00 0.00 2.59
2724 3296 7.222805 CACATCGCATTACATACCCTACATATC 59.777 40.741 0.00 0.00 0.00 1.63
2725 3297 7.041721 CACATCGCATTACATACCCTACATAT 58.958 38.462 0.00 0.00 0.00 1.78
2726 3298 6.014925 ACACATCGCATTACATACCCTACATA 60.015 38.462 0.00 0.00 0.00 2.29
2727 3299 5.221641 ACACATCGCATTACATACCCTACAT 60.222 40.000 0.00 0.00 0.00 2.29
2728 3300 4.100344 ACACATCGCATTACATACCCTACA 59.900 41.667 0.00 0.00 0.00 2.74
2729 3301 4.447724 CACACATCGCATTACATACCCTAC 59.552 45.833 0.00 0.00 0.00 3.18
2730 3302 4.627058 CACACATCGCATTACATACCCTA 58.373 43.478 0.00 0.00 0.00 3.53
2731 3303 3.466836 CACACATCGCATTACATACCCT 58.533 45.455 0.00 0.00 0.00 4.34
2732 3304 2.032030 GCACACATCGCATTACATACCC 60.032 50.000 0.00 0.00 0.00 3.69
2733 3305 2.611751 TGCACACATCGCATTACATACC 59.388 45.455 0.00 0.00 33.55 2.73
2734 3306 3.942539 TGCACACATCGCATTACATAC 57.057 42.857 0.00 0.00 33.55 2.39
2735 3307 3.686726 TGTTGCACACATCGCATTACATA 59.313 39.130 0.00 0.00 39.58 2.29
2736 3308 2.487372 TGTTGCACACATCGCATTACAT 59.513 40.909 0.00 0.00 39.58 2.29
2737 3309 1.876156 TGTTGCACACATCGCATTACA 59.124 42.857 0.00 0.00 39.58 2.41
2738 3310 2.610219 TGTTGCACACATCGCATTAC 57.390 45.000 0.00 0.00 39.58 1.89
2739 3311 3.004210 AGTTTGTTGCACACATCGCATTA 59.996 39.130 0.00 0.00 39.58 1.90
2740 3312 2.126467 GTTTGTTGCACACATCGCATT 58.874 42.857 0.00 0.00 39.58 3.56
2741 3313 1.337703 AGTTTGTTGCACACATCGCAT 59.662 42.857 0.00 0.00 39.58 4.73
2742 3314 0.737804 AGTTTGTTGCACACATCGCA 59.262 45.000 0.00 0.00 34.43 5.10
2743 3315 1.268488 TGAGTTTGTTGCACACATCGC 60.268 47.619 0.00 0.00 34.43 4.58
2744 3316 2.753989 TGAGTTTGTTGCACACATCG 57.246 45.000 0.00 0.00 34.43 3.84
2745 3317 4.917415 GGTAATGAGTTTGTTGCACACATC 59.083 41.667 0.00 0.00 34.43 3.06
2746 3318 4.584325 AGGTAATGAGTTTGTTGCACACAT 59.416 37.500 0.00 0.00 34.43 3.21
2747 3319 3.951037 AGGTAATGAGTTTGTTGCACACA 59.049 39.130 0.00 0.00 0.00 3.72
2748 3320 4.537015 GAGGTAATGAGTTTGTTGCACAC 58.463 43.478 0.00 0.00 0.00 3.82
2749 3321 3.568007 GGAGGTAATGAGTTTGTTGCACA 59.432 43.478 0.00 0.00 0.00 4.57
2750 3322 3.821033 AGGAGGTAATGAGTTTGTTGCAC 59.179 43.478 0.00 0.00 0.00 4.57
2751 3323 4.098914 AGGAGGTAATGAGTTTGTTGCA 57.901 40.909 0.00 0.00 0.00 4.08
2752 3324 5.221244 ACAAAGGAGGTAATGAGTTTGTTGC 60.221 40.000 0.00 0.00 35.18 4.17
2753 3325 6.391227 ACAAAGGAGGTAATGAGTTTGTTG 57.609 37.500 0.00 0.00 35.18 3.33
2754 3326 9.975218 ATATACAAAGGAGGTAATGAGTTTGTT 57.025 29.630 3.81 0.00 38.63 2.83
2755 3327 9.614792 GATATACAAAGGAGGTAATGAGTTTGT 57.385 33.333 0.00 0.00 40.32 2.83
2756 3328 9.838339 AGATATACAAAGGAGGTAATGAGTTTG 57.162 33.333 0.00 0.00 0.00 2.93
3122 3695 1.337260 ACTGACGCTCTGATGTGAACC 60.337 52.381 0.00 0.00 0.00 3.62
3520 4094 5.584251 CAGCAAACCAACCTTTACAATGTTT 59.416 36.000 0.00 0.00 0.00 2.83
3942 4557 7.220030 AGTGTATCATGACATTACCCAAGATC 58.780 38.462 0.00 0.00 0.00 2.75
3969 4586 9.301897 AGAAGTAAGAAGCCACAAATCTTAATT 57.698 29.630 7.05 7.05 42.93 1.40
3970 4587 8.870075 AGAAGTAAGAAGCCACAAATCTTAAT 57.130 30.769 0.00 0.00 37.40 1.40
3975 4592 6.597280 AGATGAGAAGTAAGAAGCCACAAATC 59.403 38.462 0.00 0.00 0.00 2.17
3990 4607 7.177568 ACAGTCACACTTGTATAGATGAGAAGT 59.822 37.037 0.00 0.00 0.00 3.01
4016 4634 1.422531 AAAGGCAAACAGGATGGCAA 58.577 45.000 0.00 0.00 45.08 4.52
4185 4803 3.190535 ACATGTGTTAACCGATGAAAGGC 59.809 43.478 16.79 0.00 0.00 4.35
4413 5031 3.953775 CTTGCACAGGGTCCGGGT 61.954 66.667 0.00 0.00 0.00 5.28
4457 5075 9.823647 TTATCATTCTTTAGCCACAAACAAAAA 57.176 25.926 0.00 0.00 0.00 1.94
4462 5080 9.129209 GAAACTTATCATTCTTTAGCCACAAAC 57.871 33.333 0.00 0.00 0.00 2.93
4533 5151 6.715347 AAGGTAACATGCAGAAAGAAGTTT 57.285 33.333 0.00 0.00 41.41 2.66
4566 5185 5.163258 CCTCAAAGTAGGGCATATGACTTCT 60.163 44.000 8.85 5.00 30.98 2.85
4708 5327 7.437862 GGAATTAAATTGCGCAAATATTGGAGA 59.562 33.333 28.81 7.64 0.00 3.71
4762 5381 8.315482 AGAACTTAAGTCTATTCTCCCTCAAAC 58.685 37.037 8.95 0.00 0.00 2.93
4835 5454 5.163195 ACACTAATTCCTGGTCTCACAAAGT 60.163 40.000 0.00 0.00 0.00 2.66
4842 5461 7.454260 AATGAAAACACTAATTCCTGGTCTC 57.546 36.000 0.00 0.00 0.00 3.36
5106 5737 6.889198 ACTGTATTGTAGGTGCAGATAACAT 58.111 36.000 0.00 0.00 34.07 2.71
5157 5794 5.505324 GCAGCCTGAGAAAATACACATCATC 60.505 44.000 0.00 0.00 0.00 2.92
5287 5928 5.611796 TGACAAGTGAGTAATGCATGAAC 57.388 39.130 0.00 1.64 0.00 3.18
5530 6187 9.418045 TGCTTGCTGAAAGTAAATTTAATAACC 57.582 29.630 0.00 0.00 38.34 2.85
5553 6210 2.040278 ACCATCACTGTTGGTACATGCT 59.960 45.455 9.69 0.00 45.62 3.79
5555 6212 2.162208 GCACCATCACTGTTGGTACATG 59.838 50.000 10.85 0.00 45.71 3.21
5556 6213 2.436417 GCACCATCACTGTTGGTACAT 58.564 47.619 10.85 0.00 45.71 2.29
5573 6236 3.865745 AGTGCTGATACATAAGAACGCAC 59.134 43.478 0.00 0.00 44.82 5.34
5577 6240 5.053145 CAGGGAGTGCTGATACATAAGAAC 58.947 45.833 0.00 0.00 0.00 3.01
5718 6398 3.214328 ACCGAGTCTGAAAATGCAGTTT 58.786 40.909 12.63 12.63 37.20 2.66
5766 7276 2.752354 CCCGTCCAATAATGCACTTGAA 59.248 45.455 6.98 0.00 0.00 2.69
5852 7362 9.947433 TCAAAATGGATAAAAAGAAATGCATCT 57.053 25.926 0.00 0.00 33.60 2.90
5855 7365 9.722184 TCATCAAAATGGATAAAAAGAAATGCA 57.278 25.926 0.00 0.00 33.42 3.96
5856 7366 9.977762 GTCATCAAAATGGATAAAAAGAAATGC 57.022 29.630 0.00 0.00 33.42 3.56
5869 7379 7.669304 TCCAGAAATACTTGTCATCAAAATGGA 59.331 33.333 0.00 0.00 33.42 3.41
5870 7380 7.756722 GTCCAGAAATACTTGTCATCAAAATGG 59.243 37.037 0.00 0.00 33.42 3.16
5871 7381 7.482743 CGTCCAGAAATACTTGTCATCAAAATG 59.517 37.037 0.00 0.00 32.87 2.32
5872 7382 7.362056 CCGTCCAGAAATACTTGTCATCAAAAT 60.362 37.037 0.00 0.00 32.87 1.82
5873 7383 6.072728 CCGTCCAGAAATACTTGTCATCAAAA 60.073 38.462 0.00 0.00 32.87 2.44
5874 7384 5.411361 CCGTCCAGAAATACTTGTCATCAAA 59.589 40.000 0.00 0.00 32.87 2.69
5875 7385 4.935205 CCGTCCAGAAATACTTGTCATCAA 59.065 41.667 0.00 0.00 0.00 2.57
5877 7387 4.755411 TCCGTCCAGAAATACTTGTCATC 58.245 43.478 0.00 0.00 0.00 2.92
5879 7389 3.056107 CCTCCGTCCAGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
5880 7390 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
5884 7394 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
5885 7395 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
5886 7396 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
5888 7398 2.108168 CATACTCCCTCCGTCCAGAAA 58.892 52.381 0.00 0.00 0.00 2.52
5889 7399 1.006758 ACATACTCCCTCCGTCCAGAA 59.993 52.381 0.00 0.00 0.00 3.02
5891 7401 0.747255 CACATACTCCCTCCGTCCAG 59.253 60.000 0.00 0.00 0.00 3.86
5898 7408 3.189287 CAGCAACAAACACATACTCCCTC 59.811 47.826 0.00 0.00 0.00 4.30
5899 7409 3.149196 CAGCAACAAACACATACTCCCT 58.851 45.455 0.00 0.00 0.00 4.20
5900 7410 2.351738 GCAGCAACAAACACATACTCCC 60.352 50.000 0.00 0.00 0.00 4.30
5901 7411 2.665519 CGCAGCAACAAACACATACTCC 60.666 50.000 0.00 0.00 0.00 3.85
5902 7412 2.574322 CGCAGCAACAAACACATACTC 58.426 47.619 0.00 0.00 0.00 2.59
5956 8279 8.758829 AGAAAAGTTTACCAGGTTTTCTGATTT 58.241 29.630 13.38 1.63 43.99 2.17
6005 8328 2.223876 CGCGGCCTAAGTTTACCAGATA 60.224 50.000 0.00 0.00 0.00 1.98
6023 8346 0.516877 TTCCACATTGAGAAAGCGCG 59.483 50.000 0.00 0.00 0.00 6.86
6035 8358 5.221263 GGTACAGATCGATACAGTTCCACAT 60.221 44.000 0.00 0.00 0.00 3.21
6048 8371 0.681887 TCGGCTTGGGTACAGATCGA 60.682 55.000 0.00 0.00 0.00 3.59
6088 8411 6.546395 AGTATGCATCATTCGTGAACTTTTC 58.454 36.000 0.19 0.00 0.00 2.29
6108 8440 0.036164 TGAGGCGGTTGTGCAAGTAT 59.964 50.000 0.00 0.00 36.28 2.12
6109 8441 0.882927 GTGAGGCGGTTGTGCAAGTA 60.883 55.000 0.00 0.00 36.28 2.24
6111 8443 2.639286 GTGAGGCGGTTGTGCAAG 59.361 61.111 0.00 0.00 36.28 4.01
6127 8469 2.759795 GCAGCAAAGGGAGAGGGT 59.240 61.111 0.00 0.00 0.00 4.34
6163 8505 6.932356 TCTTTATCTGGATTGCATGTTCTC 57.068 37.500 0.00 0.00 0.00 2.87
6182 8524 9.955102 AGTTCTAAGTTATCCCGTTTATTCTTT 57.045 29.630 0.00 0.00 0.00 2.52
6218 8560 2.279741 GTATGCTTGATGGAACGCTCA 58.720 47.619 0.00 0.00 0.00 4.26
6310 8652 1.576356 CTGCTCGGTTTATGCCTCTC 58.424 55.000 0.00 0.00 0.00 3.20
6544 8889 7.041030 GCTTGCTTATTTTATCCTCTAACCCTC 60.041 40.741 0.00 0.00 0.00 4.30
6596 8943 5.501156 AGAGGTCAAATGAAATGGTAGGAC 58.499 41.667 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.