Multiple sequence alignment - TraesCS7B01G131900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G131900 chr7B 100.000 8087 0 0 1 8087 159508803 159516889 0.000000e+00 14934.0
1 TraesCS7B01G131900 chr7B 98.077 104 2 0 1796 1899 413721536 413721639 1.790000e-41 182.0
2 TraesCS7B01G131900 chr7A 93.722 5225 241 35 1898 7056 205459935 205465138 0.000000e+00 7751.0
3 TraesCS7B01G131900 chr7A 86.620 1293 74 33 1 1254 205458087 205459319 0.000000e+00 1338.0
4 TraesCS7B01G131900 chr7A 95.528 492 18 3 7140 7630 205465136 205465624 0.000000e+00 784.0
5 TraesCS7B01G131900 chr7A 93.654 457 22 4 7630 8086 205465716 205466165 0.000000e+00 676.0
6 TraesCS7B01G131900 chr7A 90.547 201 14 3 1624 1819 205459722 205459922 2.240000e-65 261.0
7 TraesCS7B01G131900 chr7A 98.095 105 0 1 1792 1896 629780123 629780021 1.790000e-41 182.0
8 TraesCS7B01G131900 chr7A 92.562 121 8 1 1776 1896 68887694 68887575 1.080000e-38 172.0
9 TraesCS7B01G131900 chr7A 88.889 99 11 0 7050 7148 21837844 21837942 1.100000e-23 122.0
10 TraesCS7B01G131900 chr7D 95.025 3055 112 15 4036 7056 195626181 195629229 0.000000e+00 4763.0
11 TraesCS7B01G131900 chr7D 94.126 2162 87 19 1898 4038 195623958 195626100 0.000000e+00 3253.0
12 TraesCS7B01G131900 chr7D 85.526 1520 102 49 1 1466 195622058 195623513 0.000000e+00 1480.0
13 TraesCS7B01G131900 chr7D 90.828 894 41 20 7226 8087 195629343 195630227 0.000000e+00 1158.0
14 TraesCS7B01G131900 chr7D 89.941 169 15 2 1612 1779 195623751 195623918 4.910000e-52 217.0
15 TraesCS7B01G131900 chr7D 100.000 99 0 0 1800 1898 407716534 407716632 4.980000e-42 183.0
16 TraesCS7B01G131900 chr7D 97.059 102 3 0 7140 7241 195629227 195629328 1.080000e-38 172.0
17 TraesCS7B01G131900 chr2D 100.000 100 0 0 1800 1899 107204080 107204179 1.390000e-42 185.0
18 TraesCS7B01G131900 chr2D 94.253 87 5 0 7055 7141 87811975 87812061 5.090000e-27 134.0
19 TraesCS7B01G131900 chr2D 94.118 85 5 0 7057 7141 538943507 538943423 6.590000e-26 130.0
20 TraesCS7B01G131900 chr2D 93.750 48 2 1 568 615 124796679 124796633 4.050000e-08 71.3
21 TraesCS7B01G131900 chr2D 97.436 39 1 0 1489 1527 650061843 650061881 5.240000e-07 67.6
22 TraesCS7B01G131900 chr5D 95.614 114 4 1 1796 1908 513514665 513514552 1.790000e-41 182.0
23 TraesCS7B01G131900 chr5B 97.196 107 1 2 1793 1898 475312700 475312595 6.450000e-41 180.0
24 TraesCS7B01G131900 chr3A 94.828 116 4 2 1794 1909 692869565 692869678 6.450000e-41 180.0
25 TraesCS7B01G131900 chr2A 95.575 113 2 3 1789 1898 14303608 14303496 2.320000e-40 178.0
26 TraesCS7B01G131900 chr2A 89.796 98 8 2 7044 7141 404608198 404608293 3.060000e-24 124.0
27 TraesCS7B01G131900 chrUn 94.565 92 4 1 7051 7141 234102928 234103019 3.040000e-29 141.0
28 TraesCS7B01G131900 chr6B 94.565 92 4 1 7051 7141 154182737 154182828 3.040000e-29 141.0
29 TraesCS7B01G131900 chr6B 93.023 86 6 0 7056 7141 225523450 225523365 8.520000e-25 126.0
30 TraesCS7B01G131900 chr1A 92.391 92 7 0 7050 7141 477033554 477033463 1.830000e-26 132.0
31 TraesCS7B01G131900 chr2B 90.526 95 8 1 7053 7146 274029560 274029654 3.060000e-24 124.0
32 TraesCS7B01G131900 chr2B 93.617 47 2 1 568 614 177217221 177217176 1.460000e-07 69.4
33 TraesCS7B01G131900 chr3D 90.000 50 4 1 574 622 107662635 107662684 6.780000e-06 63.9
34 TraesCS7B01G131900 chr3B 90.000 50 4 1 574 622 158699287 158699336 6.780000e-06 63.9
35 TraesCS7B01G131900 chr6D 97.222 36 1 0 1492 1527 28301412 28301377 2.440000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G131900 chr7B 159508803 159516889 8086 False 14934.0 14934 100.000000 1 8087 1 chr7B.!!$F1 8086
1 TraesCS7B01G131900 chr7A 205458087 205466165 8078 False 2162.0 7751 92.014200 1 8086 5 chr7A.!!$F2 8085
2 TraesCS7B01G131900 chr7D 195622058 195630227 8169 False 1840.5 4763 92.084167 1 8087 6 chr7D.!!$F2 8086

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
977 1033 0.034059 CCGTCCCCACTATCATCAGC 59.966 60.000 0.00 0.00 0.00 4.26 F
1614 1703 0.031178 GTGTTCTTGCCTGCTTGGTG 59.969 55.000 0.00 0.00 38.35 4.17 F
2010 2262 0.099259 CGCTGGCATAACATGTGGTG 59.901 55.000 0.00 2.45 0.00 4.17 F
2473 2725 0.032952 GCTGTCGCCGGAATGGTATA 59.967 55.000 5.05 0.00 41.21 1.47 F
3380 3645 1.404035 GAACCACACAACACTTGTCCC 59.596 52.381 0.00 0.00 43.23 4.46 F
4151 4505 2.126071 CGTTGATGCGGACGACCT 60.126 61.111 1.72 0.00 41.53 3.85 F
5068 5422 0.250901 GCACTGGTCCAAGGACACAT 60.251 55.000 20.03 2.44 46.20 3.21 F
6532 6928 1.003580 TCAATCCAGAAGAAGGCGCTT 59.996 47.619 7.64 0.00 0.00 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 2018 0.252103 TGGAACGGAGGGAGTAGCTT 60.252 55.000 0.00 0.0 0.00 3.74 R
2459 2711 0.611200 TCCCATATACCATTCCGGCG 59.389 55.000 0.00 0.0 39.03 6.46 R
2980 3233 0.623723 TATCCAAGGCCCCAACACTC 59.376 55.000 0.00 0.0 0.00 3.51 R
3554 3820 1.153469 TGCACGCTCATGCCGAATA 60.153 52.632 11.67 0.0 45.50 1.75 R
5065 5419 2.094675 GTGCTGGCACCATTTCTATGT 58.905 47.619 14.03 0.0 40.79 2.29 R
5554 5942 1.268539 CGTGCCAAACAAGGAGACAAC 60.269 52.381 0.00 0.0 0.00 3.32 R
6827 7225 1.337823 CCGGTTCGTGTTCTTCAGGAT 60.338 52.381 0.00 0.0 40.03 3.24 R
7557 7987 1.003233 CTTTAGACCTGGGCGTCCTTT 59.997 52.381 7.97 0.0 32.91 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 5.633182 CCAATGTTGATCTTTGGTAAAACCG 59.367 40.000 0.00 0.00 42.58 4.44
77 78 7.364200 CAATGTTGATCTTTGGTAAAACCGTA 58.636 34.615 0.00 0.00 42.58 4.02
78 79 6.939132 TGTTGATCTTTGGTAAAACCGTAA 57.061 33.333 0.00 0.00 42.58 3.18
79 80 7.330900 TGTTGATCTTTGGTAAAACCGTAAA 57.669 32.000 0.00 0.00 42.58 2.01
80 81 7.769220 TGTTGATCTTTGGTAAAACCGTAAAA 58.231 30.769 0.00 0.00 42.58 1.52
81 82 7.916450 TGTTGATCTTTGGTAAAACCGTAAAAG 59.084 33.333 0.00 2.52 42.58 2.27
82 83 7.571080 TGATCTTTGGTAAAACCGTAAAAGT 57.429 32.000 0.00 0.00 42.58 2.66
83 84 7.419204 TGATCTTTGGTAAAACCGTAAAAGTG 58.581 34.615 0.00 0.00 42.58 3.16
84 85 6.756299 TCTTTGGTAAAACCGTAAAAGTGT 57.244 33.333 7.07 0.00 42.58 3.55
85 86 6.553524 TCTTTGGTAAAACCGTAAAAGTGTG 58.446 36.000 7.07 0.00 42.58 3.82
106 107 4.472833 GTGAGCCCCAAGATCATCCTATAT 59.527 45.833 0.00 0.00 0.00 0.86
135 136 6.183360 GCCCTTCCTTTATAACCTTCCAAATC 60.183 42.308 0.00 0.00 0.00 2.17
136 137 6.039382 CCCTTCCTTTATAACCTTCCAAATCG 59.961 42.308 0.00 0.00 0.00 3.34
191 192 1.839994 CTAGAGCAGATCAAACCCCCA 59.160 52.381 0.00 0.00 0.00 4.96
192 193 1.302907 AGAGCAGATCAAACCCCCAT 58.697 50.000 0.00 0.00 0.00 4.00
193 194 2.492025 AGAGCAGATCAAACCCCCATA 58.508 47.619 0.00 0.00 0.00 2.74
194 195 2.852449 AGAGCAGATCAAACCCCCATAA 59.148 45.455 0.00 0.00 0.00 1.90
195 196 3.269381 AGAGCAGATCAAACCCCCATAAA 59.731 43.478 0.00 0.00 0.00 1.40
196 197 4.023291 GAGCAGATCAAACCCCCATAAAA 58.977 43.478 0.00 0.00 0.00 1.52
197 198 4.623863 AGCAGATCAAACCCCCATAAAAT 58.376 39.130 0.00 0.00 0.00 1.82
198 199 5.032170 AGCAGATCAAACCCCCATAAAATT 58.968 37.500 0.00 0.00 0.00 1.82
245 256 5.248380 AGAACTCTACAAATTTCAGCCCT 57.752 39.130 0.00 0.00 0.00 5.19
247 258 6.410540 AGAACTCTACAAATTTCAGCCCTAG 58.589 40.000 0.00 0.00 0.00 3.02
248 259 5.104259 ACTCTACAAATTTCAGCCCTAGG 57.896 43.478 0.06 0.06 0.00 3.02
313 324 8.511321 CCTATGTAAAGTGCATTTTTGTCACTA 58.489 33.333 12.75 0.00 39.86 2.74
330 341 5.894964 TGTCACTAGCACTACCAACCATATA 59.105 40.000 0.00 0.00 0.00 0.86
334 345 6.646653 CACTAGCACTACCAACCATATATGTG 59.353 42.308 11.73 4.39 0.00 3.21
358 369 7.286775 GTGGCCATGGTAAAATCCTAAGAAATA 59.713 37.037 9.72 0.00 0.00 1.40
381 392 3.248602 CAGATTAGCCTTACGATGCCAAC 59.751 47.826 0.00 0.00 0.00 3.77
404 415 2.950781 TGATCGATGGTAGGAAGCTCT 58.049 47.619 0.54 0.00 0.00 4.09
406 417 3.706594 TGATCGATGGTAGGAAGCTCTTT 59.293 43.478 0.54 0.00 0.00 2.52
432 443 4.295870 GTTTTCTTCCGATTTGTGGGAAC 58.704 43.478 0.00 0.00 37.40 3.62
472 483 1.821216 GTGGATGTTTGGTGGACGAT 58.179 50.000 0.00 0.00 0.00 3.73
473 484 2.675603 CGTGGATGTTTGGTGGACGATA 60.676 50.000 0.00 0.00 0.00 2.92
501 512 3.211045 GGCTCAAAGTGTTTAGACCACA 58.789 45.455 0.00 0.00 35.24 4.17
503 514 3.625764 GCTCAAAGTGTTTAGACCACACA 59.374 43.478 6.01 0.00 46.01 3.72
522 533 0.892755 AGTCCGGACATTTACGAGCA 59.107 50.000 35.00 0.00 0.00 4.26
529 540 4.088648 CGGACATTTACGAGCAATTTGAC 58.911 43.478 0.00 0.00 0.00 3.18
530 541 4.142902 CGGACATTTACGAGCAATTTGACT 60.143 41.667 0.00 0.00 0.00 3.41
535 546 6.312918 ACATTTACGAGCAATTTGACTATCGT 59.687 34.615 17.31 17.31 44.63 3.73
539 552 4.688879 ACGAGCAATTTGACTATCGTTTGA 59.311 37.500 0.00 0.00 40.16 2.69
609 622 8.937884 CAAATCTCATTGAAATAATTGCAACCA 58.062 29.630 0.00 0.00 31.84 3.67
615 628 7.881751 TCATTGAAATAATTGCAACCAATTCCA 59.118 29.630 0.00 0.00 45.99 3.53
639 652 2.687935 ACAACTTGCGGGGCATAAATAG 59.312 45.455 0.00 0.00 38.76 1.73
730 775 2.102578 AGTTTTGCAAGCCTGTCAACT 58.897 42.857 0.00 1.71 0.00 3.16
731 776 3.287222 AGTTTTGCAAGCCTGTCAACTA 58.713 40.909 8.32 0.00 0.00 2.24
788 835 2.224257 GGGAAAGGCAGAGATGCTCTAG 60.224 54.545 0.00 0.00 38.99 2.43
948 1004 3.316308 GCAAGTCAACACACCTCATTTCT 59.684 43.478 0.00 0.00 0.00 2.52
967 1023 2.400269 TACTGTTTGCCCGTCCCCAC 62.400 60.000 0.00 0.00 0.00 4.61
968 1024 3.491598 CTGTTTGCCCGTCCCCACT 62.492 63.158 0.00 0.00 0.00 4.00
969 1025 2.119484 CTGTTTGCCCGTCCCCACTA 62.119 60.000 0.00 0.00 0.00 2.74
970 1026 1.301954 GTTTGCCCGTCCCCACTAT 59.698 57.895 0.00 0.00 0.00 2.12
972 1028 1.202099 TTTGCCCGTCCCCACTATCA 61.202 55.000 0.00 0.00 0.00 2.15
974 1030 1.371558 GCCCGTCCCCACTATCATC 59.628 63.158 0.00 0.00 0.00 2.92
975 1031 1.407656 GCCCGTCCCCACTATCATCA 61.408 60.000 0.00 0.00 0.00 3.07
976 1032 0.681733 CCCGTCCCCACTATCATCAG 59.318 60.000 0.00 0.00 0.00 2.90
977 1033 0.034059 CCGTCCCCACTATCATCAGC 59.966 60.000 0.00 0.00 0.00 4.26
978 1034 0.034059 CGTCCCCACTATCATCAGCC 59.966 60.000 0.00 0.00 0.00 4.85
979 1035 1.428869 GTCCCCACTATCATCAGCCT 58.571 55.000 0.00 0.00 0.00 4.58
980 1036 2.609747 GTCCCCACTATCATCAGCCTA 58.390 52.381 0.00 0.00 0.00 3.93
981 1037 2.300437 GTCCCCACTATCATCAGCCTAC 59.700 54.545 0.00 0.00 0.00 3.18
982 1038 1.625818 CCCCACTATCATCAGCCTACC 59.374 57.143 0.00 0.00 0.00 3.18
990 1050 6.434340 CACTATCATCAGCCTACCTATACACA 59.566 42.308 0.00 0.00 0.00 3.72
996 1056 3.031736 AGCCTACCTATACACACACCAG 58.968 50.000 0.00 0.00 0.00 4.00
1022 1082 1.601759 GCCATGATCCACCCATCCG 60.602 63.158 0.00 0.00 0.00 4.18
1025 1085 0.469494 CATGATCCACCCATCCGTCA 59.531 55.000 0.00 0.00 0.00 4.35
1026 1086 0.469917 ATGATCCACCCATCCGTCAC 59.530 55.000 0.00 0.00 0.00 3.67
1027 1087 1.227263 GATCCACCCATCCGTCACG 60.227 63.158 0.00 0.00 0.00 4.35
1056 1123 1.363443 GCTGAGCTCCCGATCTCTG 59.637 63.158 12.15 0.00 0.00 3.35
1057 1124 1.363443 CTGAGCTCCCGATCTCTGC 59.637 63.158 12.15 0.00 0.00 4.26
1058 1125 1.076412 TGAGCTCCCGATCTCTGCT 60.076 57.895 12.15 0.00 36.63 4.24
1059 1126 1.659794 GAGCTCCCGATCTCTGCTC 59.340 63.158 0.87 9.77 42.31 4.26
1060 1127 1.805428 GAGCTCCCGATCTCTGCTCC 61.805 65.000 0.87 0.95 42.82 4.70
1061 1128 3.038280 CTCCCGATCTCTGCTCCG 58.962 66.667 0.00 0.00 0.00 4.63
1062 1129 3.206211 CTCCCGATCTCTGCTCCGC 62.206 68.421 0.00 0.00 0.00 5.54
1063 1130 3.222855 CCCGATCTCTGCTCCGCT 61.223 66.667 0.00 0.00 0.00 5.52
1064 1131 2.334653 CCGATCTCTGCTCCGCTC 59.665 66.667 0.00 0.00 0.00 5.03
1065 1132 2.192861 CCGATCTCTGCTCCGCTCT 61.193 63.158 0.00 0.00 0.00 4.09
1146 1213 1.294780 CTGCTCTTCCTCGCCACTT 59.705 57.895 0.00 0.00 0.00 3.16
1243 1322 0.737715 CGTGCAACTAGGTGAGGAGC 60.738 60.000 13.29 0.00 31.75 4.70
1300 1379 2.651232 GCGATCGTCGGTTCTCGG 60.651 66.667 17.81 0.00 40.84 4.63
1302 1381 1.136147 CGATCGTCGGTTCTCGGTT 59.864 57.895 7.03 0.00 39.77 4.44
1303 1382 0.860618 CGATCGTCGGTTCTCGGTTC 60.861 60.000 7.03 0.00 39.77 3.62
1304 1383 0.525029 GATCGTCGGTTCTCGGTTCC 60.525 60.000 0.00 0.00 39.77 3.62
1305 1384 1.941999 ATCGTCGGTTCTCGGTTCCC 61.942 60.000 0.00 0.00 39.77 3.97
1306 1385 2.263852 GTCGGTTCTCGGTTCCCC 59.736 66.667 0.00 0.00 39.77 4.81
1307 1386 2.203669 TCGGTTCTCGGTTCCCCA 60.204 61.111 0.00 0.00 39.77 4.96
1308 1387 1.611261 TCGGTTCTCGGTTCCCCAT 60.611 57.895 0.00 0.00 39.77 4.00
1309 1388 1.153429 CGGTTCTCGGTTCCCCATC 60.153 63.158 0.00 0.00 34.75 3.51
1310 1389 1.614241 CGGTTCTCGGTTCCCCATCT 61.614 60.000 0.00 0.00 34.75 2.90
1313 1392 1.278127 GTTCTCGGTTCCCCATCTCAA 59.722 52.381 0.00 0.00 0.00 3.02
1324 1403 3.009473 TCCCCATCTCAAAAAGGAGTGAG 59.991 47.826 0.00 0.00 42.23 3.51
1332 1411 1.609208 AAAAGGAGTGAGCACGCATT 58.391 45.000 6.68 2.75 36.74 3.56
1343 1422 3.245990 TGAGCACGCATTCATTCTATTCG 59.754 43.478 0.00 0.00 0.00 3.34
1358 1437 4.963373 TCTATTCGTTTGTTCCCACAAGA 58.037 39.130 0.00 0.00 43.92 3.02
1370 1450 1.665735 CCCACAAGATTTTTGGCGTCG 60.666 52.381 0.00 0.00 0.00 5.12
1392 1481 4.634883 CGCCTACTTCTAGAACTACAGTGA 59.365 45.833 0.00 0.00 0.00 3.41
1402 1491 4.500603 GAACTACAGTGAAGTTCCGAGA 57.499 45.455 0.00 0.00 44.60 4.04
1415 1504 3.628487 AGTTCCGAGAGAGTATTCCTTCG 59.372 47.826 3.06 3.06 32.56 3.79
1421 1510 4.438880 CGAGAGAGTATTCCTTCGCTGAAA 60.439 45.833 0.00 0.00 0.00 2.69
1422 1511 5.407407 AGAGAGTATTCCTTCGCTGAAAA 57.593 39.130 0.00 0.00 0.00 2.29
1423 1512 5.983540 AGAGAGTATTCCTTCGCTGAAAAT 58.016 37.500 0.00 0.00 0.00 1.82
1429 1518 8.202745 AGTATTCCTTCGCTGAAAATAGAAAG 57.797 34.615 0.00 0.00 0.00 2.62
1430 1519 7.824779 AGTATTCCTTCGCTGAAAATAGAAAGT 59.175 33.333 0.00 0.00 0.00 2.66
1439 1528 5.106118 GCTGAAAATAGAAAGTGGAGTTCCC 60.106 44.000 0.00 0.00 34.29 3.97
1441 1530 6.003950 TGAAAATAGAAAGTGGAGTTCCCTG 58.996 40.000 0.00 0.00 35.38 4.45
1475 1564 6.662616 GCAAACTGCGTCATAATATTGAGAT 58.337 36.000 0.00 0.00 31.71 2.75
1476 1565 7.796838 GCAAACTGCGTCATAATATTGAGATA 58.203 34.615 0.00 0.00 31.71 1.98
1482 1571 9.457110 CTGCGTCATAATATTGAGATATACTCC 57.543 37.037 0.00 0.00 44.34 3.85
1483 1572 8.414003 TGCGTCATAATATTGAGATATACTCCC 58.586 37.037 0.00 0.00 44.34 4.30
1484 1573 8.634444 GCGTCATAATATTGAGATATACTCCCT 58.366 37.037 0.00 0.00 44.34 4.20
1490 1579 8.602472 AATATTGAGATATACTCCCTCAGGTC 57.398 38.462 0.00 0.00 44.34 3.85
1491 1580 5.671463 TTGAGATATACTCCCTCAGGTCT 57.329 43.478 0.00 0.00 44.34 3.85
1492 1581 5.249780 TGAGATATACTCCCTCAGGTCTC 57.750 47.826 0.00 0.00 44.34 3.36
1493 1582 4.917040 TGAGATATACTCCCTCAGGTCTCT 59.083 45.833 6.76 0.00 44.34 3.10
1494 1583 6.092241 TGAGATATACTCCCTCAGGTCTCTA 58.908 44.000 6.76 0.00 44.34 2.43
1495 1584 6.562993 TGAGATATACTCCCTCAGGTCTCTAA 59.437 42.308 6.76 0.00 44.34 2.10
1496 1585 7.027874 AGATATACTCCCTCAGGTCTCTAAG 57.972 44.000 0.00 0.00 0.00 2.18
1497 1586 6.795507 AGATATACTCCCTCAGGTCTCTAAGA 59.204 42.308 0.00 0.00 0.00 2.10
1498 1587 3.375647 ACTCCCTCAGGTCTCTAAGAC 57.624 52.381 0.00 0.00 44.32 3.01
1499 1588 2.294074 CTCCCTCAGGTCTCTAAGACG 58.706 57.143 0.00 0.00 45.96 4.18
1500 1589 1.634459 TCCCTCAGGTCTCTAAGACGT 59.366 52.381 0.00 0.00 45.96 4.34
1501 1590 2.018515 CCCTCAGGTCTCTAAGACGTC 58.981 57.143 7.70 7.70 45.96 4.34
1502 1591 2.356330 CCCTCAGGTCTCTAAGACGTCT 60.356 54.545 13.58 13.58 45.96 4.18
1503 1592 3.349022 CCTCAGGTCTCTAAGACGTCTT 58.651 50.000 31.70 31.70 45.96 3.01
1504 1593 4.515361 CCTCAGGTCTCTAAGACGTCTTA 58.485 47.826 30.65 30.65 45.96 2.10
1505 1594 5.127491 CCTCAGGTCTCTAAGACGTCTTAT 58.873 45.833 32.25 17.49 45.96 1.73
1506 1595 6.289834 CCTCAGGTCTCTAAGACGTCTTATA 58.710 44.000 32.25 25.30 45.96 0.98
1507 1596 6.938030 CCTCAGGTCTCTAAGACGTCTTATAT 59.062 42.308 32.25 14.79 45.96 0.86
1508 1597 7.446013 CCTCAGGTCTCTAAGACGTCTTATATT 59.554 40.741 32.25 14.42 45.96 1.28
1509 1598 8.155821 TCAGGTCTCTAAGACGTCTTATATTG 57.844 38.462 32.25 22.36 45.96 1.90
1510 1599 7.991460 TCAGGTCTCTAAGACGTCTTATATTGA 59.009 37.037 32.25 24.69 45.96 2.57
1511 1600 8.788806 CAGGTCTCTAAGACGTCTTATATTGAT 58.211 37.037 32.25 17.65 45.96 2.57
1512 1601 8.788806 AGGTCTCTAAGACGTCTTATATTGATG 58.211 37.037 32.25 20.83 45.96 3.07
1513 1602 8.784994 GGTCTCTAAGACGTCTTATATTGATGA 58.215 37.037 32.25 23.23 45.96 2.92
1516 1605 9.952188 CTCTAAGACGTCTTATATTGATGAACA 57.048 33.333 32.25 12.38 37.75 3.18
1517 1606 9.952188 TCTAAGACGTCTTATATTGATGAACAG 57.048 33.333 32.25 20.04 37.75 3.16
1518 1607 9.952188 CTAAGACGTCTTATATTGATGAACAGA 57.048 33.333 32.25 11.39 37.75 3.41
1519 1608 8.864069 AAGACGTCTTATATTGATGAACAGAG 57.136 34.615 28.80 0.00 33.79 3.35
1520 1609 7.429633 AGACGTCTTATATTGATGAACAGAGG 58.570 38.462 13.58 0.00 0.00 3.69
1521 1610 6.516718 ACGTCTTATATTGATGAACAGAGGG 58.483 40.000 5.10 0.00 0.00 4.30
1522 1611 6.323996 ACGTCTTATATTGATGAACAGAGGGA 59.676 38.462 5.10 0.00 0.00 4.20
1523 1612 6.865726 CGTCTTATATTGATGAACAGAGGGAG 59.134 42.308 0.00 0.00 0.00 4.30
1524 1613 7.470702 CGTCTTATATTGATGAACAGAGGGAGT 60.471 40.741 0.00 0.00 0.00 3.85
1525 1614 8.861086 GTCTTATATTGATGAACAGAGGGAGTA 58.139 37.037 0.00 0.00 0.00 2.59
1526 1615 9.607333 TCTTATATTGATGAACAGAGGGAGTAT 57.393 33.333 0.00 0.00 0.00 2.12
1535 1624 4.561254 ACAGAGGGAGTATCAGGGTAAT 57.439 45.455 0.00 0.00 36.25 1.89
1571 1660 3.641437 TTTGCCATACTGTGTTCTTGC 57.359 42.857 0.00 0.00 0.00 4.01
1572 1661 1.533625 TGCCATACTGTGTTCTTGCC 58.466 50.000 0.00 0.00 0.00 4.52
1573 1662 1.073763 TGCCATACTGTGTTCTTGCCT 59.926 47.619 0.00 0.00 0.00 4.75
1574 1663 1.470098 GCCATACTGTGTTCTTGCCTG 59.530 52.381 0.00 0.00 0.00 4.85
1575 1664 1.470098 CCATACTGTGTTCTTGCCTGC 59.530 52.381 0.00 0.00 0.00 4.85
1576 1665 2.430465 CATACTGTGTTCTTGCCTGCT 58.570 47.619 0.00 0.00 0.00 4.24
1577 1666 2.169832 TACTGTGTTCTTGCCTGCTC 57.830 50.000 0.00 0.00 0.00 4.26
1580 1669 1.952296 CTGTGTTCTTGCCTGCTCTTT 59.048 47.619 0.00 0.00 0.00 2.52
1604 1693 4.911514 TTTTAGGGAACTGTGTTCTTGC 57.088 40.909 9.81 0.00 43.88 4.01
1605 1694 2.561478 TAGGGAACTGTGTTCTTGCC 57.439 50.000 9.81 3.93 43.88 4.52
1606 1695 0.846693 AGGGAACTGTGTTCTTGCCT 59.153 50.000 9.81 5.86 41.13 4.75
1607 1696 0.954452 GGGAACTGTGTTCTTGCCTG 59.046 55.000 9.81 0.00 0.00 4.85
1608 1697 0.312102 GGAACTGTGTTCTTGCCTGC 59.688 55.000 9.81 0.00 0.00 4.85
1610 1699 1.678101 GAACTGTGTTCTTGCCTGCTT 59.322 47.619 3.49 0.00 0.00 3.91
1611 1700 1.027357 ACTGTGTTCTTGCCTGCTTG 58.973 50.000 0.00 0.00 0.00 4.01
1612 1701 0.313043 CTGTGTTCTTGCCTGCTTGG 59.687 55.000 0.00 0.00 39.35 3.61
1613 1702 0.395586 TGTGTTCTTGCCTGCTTGGT 60.396 50.000 0.00 0.00 38.35 3.67
1614 1703 0.031178 GTGTTCTTGCCTGCTTGGTG 59.969 55.000 0.00 0.00 38.35 4.17
1615 1704 1.108727 TGTTCTTGCCTGCTTGGTGG 61.109 55.000 0.00 0.00 38.35 4.61
1637 1859 5.130292 GCAGCATAATGCCATGTCTAATT 57.870 39.130 0.00 0.00 46.52 1.40
1641 1863 7.652909 GCAGCATAATGCCATGTCTAATTTTTA 59.347 33.333 0.00 0.00 46.52 1.52
1642 1864 8.971321 CAGCATAATGCCATGTCTAATTTTTAC 58.029 33.333 0.00 0.00 46.52 2.01
1643 1865 8.917088 AGCATAATGCCATGTCTAATTTTTACT 58.083 29.630 0.00 0.00 46.52 2.24
1645 1867 9.385902 CATAATGCCATGTCTAATTTTTACTCG 57.614 33.333 0.00 0.00 0.00 4.18
1647 1869 6.662414 TGCCATGTCTAATTTTTACTCGAG 57.338 37.500 11.84 11.84 0.00 4.04
1649 1871 5.815740 GCCATGTCTAATTTTTACTCGAGGA 59.184 40.000 18.41 4.89 0.00 3.71
1651 1873 7.012421 GCCATGTCTAATTTTTACTCGAGGAAT 59.988 37.037 18.41 8.38 0.00 3.01
1653 1875 9.922305 CATGTCTAATTTTTACTCGAGGAATTC 57.078 33.333 18.41 0.00 0.00 2.17
1700 1923 5.407407 TTTCCTACTTAAGGCTCAGAGTG 57.593 43.478 7.53 0.18 46.10 3.51
1703 1926 2.464157 ACTTAAGGCTCAGAGTGCAC 57.536 50.000 9.40 9.40 0.00 4.57
1748 1971 7.985184 TGTTATCCACATACAGTAGCCTTAAAG 59.015 37.037 0.00 0.00 0.00 1.85
1755 1978 8.297426 CACATACAGTAGCCTTAAAGATCGATA 58.703 37.037 0.00 0.00 0.00 2.92
1781 2004 8.832521 AGTCTACTCTCAGTAATAGACAATTCG 58.167 37.037 11.64 0.00 43.94 3.34
1782 2005 7.588488 GTCTACTCTCAGTAATAGACAATTCGC 59.412 40.741 5.58 0.00 42.02 4.70
1784 2007 5.127194 ACTCTCAGTAATAGACAATTCGCCA 59.873 40.000 0.00 0.00 0.00 5.69
1785 2008 5.972935 TCTCAGTAATAGACAATTCGCCAA 58.027 37.500 0.00 0.00 0.00 4.52
1786 2009 6.042777 TCTCAGTAATAGACAATTCGCCAAG 58.957 40.000 0.00 0.00 0.00 3.61
1787 2010 5.730550 TCAGTAATAGACAATTCGCCAAGT 58.269 37.500 0.00 0.00 0.00 3.16
1788 2011 6.869695 TCAGTAATAGACAATTCGCCAAGTA 58.130 36.000 0.00 0.00 0.00 2.24
1789 2012 7.497595 TCAGTAATAGACAATTCGCCAAGTAT 58.502 34.615 0.00 0.00 0.00 2.12
1790 2013 7.652105 TCAGTAATAGACAATTCGCCAAGTATC 59.348 37.037 0.00 0.00 0.00 2.24
1791 2014 7.438160 CAGTAATAGACAATTCGCCAAGTATCA 59.562 37.037 0.00 0.00 0.00 2.15
1792 2015 7.985184 AGTAATAGACAATTCGCCAAGTATCAA 59.015 33.333 0.00 0.00 0.00 2.57
1793 2016 4.946784 AGACAATTCGCCAAGTATCAAC 57.053 40.909 0.00 0.00 0.00 3.18
1794 2017 4.323417 AGACAATTCGCCAAGTATCAACA 58.677 39.130 0.00 0.00 0.00 3.33
1795 2018 4.759693 AGACAATTCGCCAAGTATCAACAA 59.240 37.500 0.00 0.00 0.00 2.83
1796 2019 5.240623 AGACAATTCGCCAAGTATCAACAAA 59.759 36.000 0.00 0.00 0.00 2.83
1815 2055 0.252103 AGCTACTCCCTCCGTTCCAA 60.252 55.000 0.00 0.00 0.00 3.53
1819 2059 3.118519 GCTACTCCCTCCGTTCCAAAATA 60.119 47.826 0.00 0.00 0.00 1.40
1820 2060 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1821 2061 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1824 2064 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1826 2066 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1827 2067 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1828 2068 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
1829 2069 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1830 2070 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
1831 2071 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
1832 2072 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
1833 2073 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
1834 2074 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
1835 2075 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
1836 2076 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
1837 2077 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
1838 2078 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
1869 2109 7.797038 AGTACAAAGTTAGTACAAAGTTGGG 57.203 36.000 6.30 0.00 43.24 4.12
1870 2110 7.341030 AGTACAAAGTTAGTACAAAGTTGGGT 58.659 34.615 6.30 0.00 43.24 4.51
1871 2111 6.688637 ACAAAGTTAGTACAAAGTTGGGTC 57.311 37.500 0.00 0.00 0.00 4.46
1872 2112 6.181908 ACAAAGTTAGTACAAAGTTGGGTCA 58.818 36.000 0.00 0.00 0.00 4.02
1873 2113 6.831868 ACAAAGTTAGTACAAAGTTGGGTCAT 59.168 34.615 0.00 0.00 0.00 3.06
1874 2114 7.012989 ACAAAGTTAGTACAAAGTTGGGTCATC 59.987 37.037 0.00 0.00 0.00 2.92
1875 2115 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
1876 2116 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
1877 2117 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
1878 2118 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
1879 2119 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
1880 2120 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
1881 2121 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
1882 2122 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
1883 2123 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
1884 2124 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
1885 2125 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
1886 2126 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
1887 2127 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
1888 2128 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
1889 2129 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
1890 2130 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
1891 2131 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1892 2132 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1893 2133 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
1894 2134 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
1895 2135 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
1896 2136 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
2010 2262 0.099259 CGCTGGCATAACATGTGGTG 59.901 55.000 0.00 2.45 0.00 4.17
2048 2300 5.065218 GGTTAAAGTGAGCATAGTGGATGTG 59.935 44.000 0.00 0.00 37.90 3.21
2082 2334 6.377327 AAACAGTACCAACACAAGATTCTG 57.623 37.500 0.00 0.00 0.00 3.02
2250 2502 2.123769 TGGTTGCTGCTGTTGGCT 60.124 55.556 0.00 0.00 42.39 4.75
2376 2628 3.054361 ACCCTATGTTGGAACATCTGACC 60.054 47.826 8.27 0.00 46.10 4.02
2384 2636 5.249622 TGTTGGAACATCTGACCTGGTATTA 59.750 40.000 0.00 0.00 39.30 0.98
2441 2693 3.308866 GTGTCAGCCGTGTTATATTGTCC 59.691 47.826 0.00 0.00 0.00 4.02
2447 2699 3.550030 GCCGTGTTATATTGTCCAATGCC 60.550 47.826 2.80 0.00 32.50 4.40
2459 2711 1.136147 CAATGCCGCTTCAGCTGTC 59.864 57.895 14.67 3.54 39.32 3.51
2473 2725 0.032952 GCTGTCGCCGGAATGGTATA 59.967 55.000 5.05 0.00 41.21 1.47
2494 2746 8.058847 GGTATATGGGATATTAATGGCTTCCAA 58.941 37.037 0.00 0.00 36.95 3.53
2576 2828 1.722464 CAATGTGCAAATGCGGTCAAG 59.278 47.619 0.00 0.00 45.83 3.02
2980 3233 6.657875 AGATAAAAAGATCCCTCTGGTTCTG 58.342 40.000 0.00 0.00 39.34 3.02
3042 3295 5.500234 TGATACAATACCTGCTGCTTTCTT 58.500 37.500 0.00 0.00 0.00 2.52
3087 3340 7.775093 ACATAATGAACAGGTTACACATAGCAT 59.225 33.333 0.00 0.00 0.00 3.79
3088 3341 8.623903 CATAATGAACAGGTTACACATAGCATT 58.376 33.333 0.00 0.00 0.00 3.56
3380 3645 1.404035 GAACCACACAACACTTGTCCC 59.596 52.381 0.00 0.00 43.23 4.46
3554 3820 6.271488 ACGAATGTGATCCAAATTTGTGAT 57.729 33.333 16.73 16.91 35.17 3.06
3615 3883 5.869579 AGAGCATACCGAAATATTGACCAT 58.130 37.500 0.00 0.00 0.00 3.55
3626 3894 7.153985 CGAAATATTGACCATGGCCAAATTAT 58.846 34.615 17.99 9.10 0.00 1.28
3868 4137 3.181414 TGAGATCATCTGGCCATCTCCTA 60.181 47.826 24.10 9.29 41.29 2.94
3871 4140 3.845781 TCATCTGGCCATCTCCTAAAC 57.154 47.619 5.51 0.00 0.00 2.01
3883 4152 8.376270 GGCCATCTCCTAAACAGTTTATATAGT 58.624 37.037 6.20 0.00 0.00 2.12
3912 4181 5.059833 ACTTGTCCTCTTCTAAAGCAAGTG 58.940 41.667 0.00 0.00 41.99 3.16
4151 4505 2.126071 CGTTGATGCGGACGACCT 60.126 61.111 1.72 0.00 41.53 3.85
4404 4758 6.089551 CGCTAGAATATGAATACAAAGGGTCG 59.910 42.308 0.00 0.00 0.00 4.79
4406 4760 8.086522 GCTAGAATATGAATACAAAGGGTCGTA 58.913 37.037 0.00 0.00 0.00 3.43
4443 4797 2.136298 TGGCTTGTTGACAGGTGAAA 57.864 45.000 0.00 0.00 0.00 2.69
4903 5257 5.707298 ACAATTTTTGTGTCTCCGATGATCT 59.293 36.000 0.00 0.00 43.48 2.75
5065 5419 1.770110 AGGCACTGGTCCAAGGACA 60.770 57.895 20.03 6.43 46.20 4.02
5068 5422 0.250901 GCACTGGTCCAAGGACACAT 60.251 55.000 20.03 2.44 46.20 3.21
5103 5457 2.806745 GCACTTAGGCACAGTTCTGACA 60.807 50.000 6.83 0.00 0.00 3.58
5194 5571 1.028330 CATGCACATGGGACGAGCTT 61.028 55.000 0.00 0.00 35.24 3.74
5222 5600 5.118664 CACATGCCTAACCTTTACGATATCG 59.881 44.000 23.18 23.18 46.33 2.92
5407 5795 5.127682 GGGGCATGTCAAAACTCTAATGATT 59.872 40.000 0.00 0.00 0.00 2.57
5434 5822 3.449737 ACATTATAGTACCGGTGTGCACT 59.550 43.478 19.93 15.44 0.00 4.40
5476 5864 4.933400 GGTCAGAAGTTTGGCGTTAGATTA 59.067 41.667 0.00 0.00 0.00 1.75
5506 5894 3.864789 ATAAGCATTCCGAACCCTCAT 57.135 42.857 0.00 0.00 0.00 2.90
5626 6014 9.730705 ATTTCAGTTCTTGAGATCTATTGACAA 57.269 29.630 0.00 0.00 37.07 3.18
5669 6057 9.508567 GATTCTAATTGTTTACTCTTCAATGCC 57.491 33.333 0.00 0.00 33.04 4.40
5671 6059 4.701956 ATTGTTTACTCTTCAATGCCGG 57.298 40.909 0.00 0.00 31.77 6.13
5913 6301 3.877559 TGTACTTGAGATGGCCAATGAG 58.122 45.455 10.96 6.47 0.00 2.90
5971 6361 5.323371 TCTTTTGTTTTCCTGACAACTGG 57.677 39.130 0.00 0.00 36.79 4.00
5987 6377 1.765314 ACTGGCTTGAGTATAGCTGGG 59.235 52.381 0.00 0.00 38.67 4.45
6045 6435 1.402787 CTGTTCTTGCTGGGGTTTGT 58.597 50.000 0.00 0.00 0.00 2.83
6090 6480 5.947228 TGGATCACTTTCTTAAACAGCTG 57.053 39.130 13.48 13.48 0.00 4.24
6147 6537 1.142060 ACGGTTGGTCTGTTTGATGGA 59.858 47.619 0.00 0.00 30.45 3.41
6162 6552 6.974965 GTTTGATGGAAACTTCAGACAGAAT 58.025 36.000 0.00 0.00 44.30 2.40
6210 6600 3.809832 GGTATCGATTCACCACATCCTTG 59.190 47.826 11.74 0.00 34.77 3.61
6214 6604 4.900684 TCGATTCACCACATCCTTGTTTA 58.099 39.130 0.00 0.00 32.34 2.01
6228 6618 6.918892 TCCTTGTTTATCGGATACATGTTG 57.081 37.500 2.30 0.00 0.00 3.33
6229 6619 5.295787 TCCTTGTTTATCGGATACATGTTGC 59.704 40.000 2.30 0.00 0.00 4.17
6262 6652 5.605564 TGGCATGAACATATAATACGCAC 57.394 39.130 0.00 0.00 0.00 5.34
6294 6684 8.458573 AATGCCGTACTGAATTTTGGATATAA 57.541 30.769 0.00 0.00 0.00 0.98
6314 6704 9.907576 GATATAATTTCTGTTTCAGTGACTTCG 57.092 33.333 0.00 0.00 32.61 3.79
6349 6745 9.191995 AGTTTTCGTTATTTATTTTTCTGCTGG 57.808 29.630 0.00 0.00 0.00 4.85
6350 6746 9.187455 GTTTTCGTTATTTATTTTTCTGCTGGA 57.813 29.630 0.00 0.00 0.00 3.86
6376 6772 6.350780 GGGAAGATTTGCATGTCTGAATTCTT 60.351 38.462 7.05 1.16 0.00 2.52
6418 6814 3.797039 TCTGAGTGTGTGTTCAAGGAAG 58.203 45.455 0.00 0.00 0.00 3.46
6474 6870 4.356436 TGGAAGTGGAGATGATCTCAAGA 58.644 43.478 22.67 4.57 45.12 3.02
6477 6873 2.699846 AGTGGAGATGATCTCAAGAGCC 59.300 50.000 22.67 6.71 45.12 4.70
6504 6900 2.522367 GGGTTTCCTGACGACCCCA 61.522 63.158 6.64 0.00 45.94 4.96
6510 6906 1.071471 CCTGACGACCCCATATGCC 59.929 63.158 0.00 0.00 0.00 4.40
6532 6928 1.003580 TCAATCCAGAAGAAGGCGCTT 59.996 47.619 7.64 0.00 0.00 4.68
6594 6990 1.451504 CCTCACAACAGCTGGGTCA 59.548 57.895 19.93 0.93 0.00 4.02
6597 6993 2.233271 CTCACAACAGCTGGGTCAATT 58.767 47.619 19.93 0.00 0.00 2.32
6741 7137 1.402456 GCTTCATGCAGGCTTCAAGTG 60.402 52.381 0.00 0.00 42.31 3.16
6791 7189 2.161855 TCTGATGCACAATTCCACCAC 58.838 47.619 0.00 0.00 0.00 4.16
6814 7212 3.650950 CCCATATCAGGGCCCCGG 61.651 72.222 21.43 12.17 43.10 5.73
6918 7316 1.617850 GGCCATCACAAACACCATGAA 59.382 47.619 0.00 0.00 0.00 2.57
6982 7380 4.467084 GGTGGGCGGATGAAGCGA 62.467 66.667 0.00 0.00 35.00 4.93
7053 7451 4.397730 TGCCTTGTGCGTTTGAACATATAT 59.602 37.500 0.00 0.00 45.60 0.86
7054 7452 5.586643 TGCCTTGTGCGTTTGAACATATATA 59.413 36.000 0.00 0.00 45.60 0.86
7055 7453 6.094186 TGCCTTGTGCGTTTGAACATATATAA 59.906 34.615 0.00 0.00 45.60 0.98
7056 7454 7.138736 GCCTTGTGCGTTTGAACATATATAAT 58.861 34.615 0.00 0.00 32.25 1.28
7057 7455 8.286800 GCCTTGTGCGTTTGAACATATATAATA 58.713 33.333 0.00 0.00 32.25 0.98
7058 7456 9.594038 CCTTGTGCGTTTGAACATATATAATAC 57.406 33.333 0.00 0.00 32.25 1.89
7061 7459 8.984764 TGTGCGTTTGAACATATATAATACTCC 58.015 33.333 0.00 0.00 0.00 3.85
7062 7460 8.440833 GTGCGTTTGAACATATATAATACTCCC 58.559 37.037 0.00 0.00 0.00 4.30
7063 7461 8.372459 TGCGTTTGAACATATATAATACTCCCT 58.628 33.333 0.00 0.00 0.00 4.20
7064 7462 8.870879 GCGTTTGAACATATATAATACTCCCTC 58.129 37.037 0.00 0.00 0.00 4.30
7065 7463 9.073368 CGTTTGAACATATATAATACTCCCTCG 57.927 37.037 0.00 0.00 0.00 4.63
7066 7464 9.367444 GTTTGAACATATATAATACTCCCTCGG 57.633 37.037 0.00 0.00 0.00 4.63
7067 7465 8.660295 TTGAACATATATAATACTCCCTCGGT 57.340 34.615 0.00 0.00 0.00 4.69
7068 7466 8.289939 TGAACATATATAATACTCCCTCGGTC 57.710 38.462 0.00 0.00 0.00 4.79
7069 7467 7.341256 TGAACATATATAATACTCCCTCGGTCC 59.659 40.741 0.00 0.00 0.00 4.46
7070 7468 6.134754 ACATATATAATACTCCCTCGGTCCC 58.865 44.000 0.00 0.00 0.00 4.46
7071 7469 4.687262 ATATAATACTCCCTCGGTCCCA 57.313 45.455 0.00 0.00 0.00 4.37
7072 7470 3.562108 ATAATACTCCCTCGGTCCCAT 57.438 47.619 0.00 0.00 0.00 4.00
7073 7471 4.687262 ATAATACTCCCTCGGTCCCATA 57.313 45.455 0.00 0.00 0.00 2.74
7074 7472 3.339713 AATACTCCCTCGGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
7075 7473 3.562108 ATACTCCCTCGGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
7076 7474 4.687262 ATACTCCCTCGGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
7077 7475 3.562108 ACTCCCTCGGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
7078 7476 4.687262 ACTCCCTCGGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
7079 7477 5.019657 ACTCCCTCGGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
7080 7478 5.024118 ACTCCCTCGGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
7081 7479 5.222484 ACTCCCTCGGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
7082 7480 5.850278 TCCCTCGGTCCCATAATATAAGAT 58.150 41.667 0.00 0.00 0.00 2.40
7083 7481 5.661312 TCCCTCGGTCCCATAATATAAGATG 59.339 44.000 0.00 0.00 0.00 2.90
7084 7482 5.425539 CCCTCGGTCCCATAATATAAGATGT 59.574 44.000 0.00 0.00 0.00 3.06
7085 7483 6.070194 CCCTCGGTCCCATAATATAAGATGTT 60.070 42.308 0.00 0.00 0.00 2.71
7086 7484 7.394816 CCTCGGTCCCATAATATAAGATGTTT 58.605 38.462 0.00 0.00 0.00 2.83
7087 7485 7.883311 CCTCGGTCCCATAATATAAGATGTTTT 59.117 37.037 0.00 0.00 0.00 2.43
7088 7486 9.284968 CTCGGTCCCATAATATAAGATGTTTTT 57.715 33.333 0.00 0.00 0.00 1.94
7115 7513 9.695526 TGACACTACACTAATGTTAAAATACGT 57.304 29.630 0.00 0.00 40.48 3.57
7117 7515 9.918630 ACACTACACTAATGTTAAAATACGTCT 57.081 29.630 0.00 0.00 40.48 4.18
7136 7534 4.872664 GTCTTACATTATGAGACGGAGGG 58.127 47.826 0.00 0.00 34.53 4.30
7137 7535 4.583489 GTCTTACATTATGAGACGGAGGGA 59.417 45.833 0.00 0.00 34.53 4.20
7138 7536 4.827835 TCTTACATTATGAGACGGAGGGAG 59.172 45.833 0.00 0.00 0.00 4.30
7329 7756 2.908796 CCCTTCCTTAGACCGGCC 59.091 66.667 0.00 0.00 0.00 6.13
7439 7866 0.464452 AAAATACGAGAGGCTCCCCG 59.536 55.000 20.59 20.59 35.76 5.73
7513 7943 1.625870 CGCGACGCAGATACACAAG 59.374 57.895 21.35 0.00 0.00 3.16
7557 7987 3.808728 AGCAAGCTTACAGAAACAGTCA 58.191 40.909 0.00 0.00 0.00 3.41
7590 8020 5.586643 CCAGGTCTAAAGCTTCTGGATTAAC 59.413 44.000 21.13 3.53 45.66 2.01
7600 8030 5.352569 AGCTTCTGGATTAACAATTCGTCAG 59.647 40.000 0.00 0.00 0.00 3.51
7653 8176 1.524355 CATCGGAGAAAGCATACAGCG 59.476 52.381 0.00 0.00 46.47 5.18
7688 8211 2.107031 TCCCACAATGCTATCATCTGGG 59.893 50.000 12.98 12.98 44.50 4.45
7705 8228 3.641906 TCTGGGCTGTAGCTATAAAGGAC 59.358 47.826 0.00 0.00 41.70 3.85
7707 8230 3.388024 TGGGCTGTAGCTATAAAGGACAG 59.612 47.826 6.24 6.24 41.70 3.51
7726 8249 6.099269 AGGACAGTCTTAGGTGTTTCTTGTAA 59.901 38.462 0.00 0.00 0.00 2.41
7745 8268 1.080434 GAGCAGACCTGACACGGAC 60.080 63.158 0.47 0.00 0.00 4.79
7755 8278 0.246360 TGACACGGACACTAGGCATG 59.754 55.000 0.00 0.00 0.00 4.06
7756 8279 0.530744 GACACGGACACTAGGCATGA 59.469 55.000 0.00 0.00 0.00 3.07
7783 8307 5.486706 GCGAACTACCATTACATTTGTACG 58.513 41.667 0.00 0.00 0.00 3.67
7999 8552 3.040147 TGTGTCAGTAACAGCCTAAGC 57.960 47.619 0.00 0.00 38.97 3.09
8026 8579 9.627123 AAGGCAGTTATTTATCAAGCATACTAA 57.373 29.630 0.00 0.00 0.00 2.24
8027 8580 9.277783 AGGCAGTTATTTATCAAGCATACTAAG 57.722 33.333 0.00 0.00 0.00 2.18
8028 8581 9.057089 GGCAGTTATTTATCAAGCATACTAAGT 57.943 33.333 0.00 0.00 0.00 2.24
8052 8605 4.209538 CTGTGCAAGAATATTCCCATGGA 58.790 43.478 15.22 7.57 0.00 3.41
8053 8606 4.608269 TGTGCAAGAATATTCCCATGGAA 58.392 39.130 15.22 6.18 46.39 3.53
8054 8607 5.022122 TGTGCAAGAATATTCCCATGGAAA 58.978 37.500 15.22 0.00 45.41 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 0.250553 TGGGGCTCACACTTTTACGG 60.251 55.000 0.00 0.00 0.00 4.02
74 75 1.535462 CTTGGGGCTCACACTTTTACG 59.465 52.381 0.00 0.00 0.00 3.18
75 76 2.858745 TCTTGGGGCTCACACTTTTAC 58.141 47.619 0.00 0.00 0.00 2.01
77 78 2.158475 TGATCTTGGGGCTCACACTTTT 60.158 45.455 0.00 0.00 0.00 2.27
78 79 1.425066 TGATCTTGGGGCTCACACTTT 59.575 47.619 0.00 0.00 0.00 2.66
79 80 1.067295 TGATCTTGGGGCTCACACTT 58.933 50.000 0.00 0.00 0.00 3.16
80 81 1.211457 GATGATCTTGGGGCTCACACT 59.789 52.381 0.00 0.00 0.00 3.55
81 82 1.673168 GATGATCTTGGGGCTCACAC 58.327 55.000 0.00 0.00 0.00 3.82
82 83 0.548031 GGATGATCTTGGGGCTCACA 59.452 55.000 0.00 0.00 0.00 3.58
83 84 0.842635 AGGATGATCTTGGGGCTCAC 59.157 55.000 0.00 0.00 0.00 3.51
84 85 2.494888 TAGGATGATCTTGGGGCTCA 57.505 50.000 0.00 0.00 0.00 4.26
85 86 6.814954 TTATATAGGATGATCTTGGGGCTC 57.185 41.667 0.00 0.00 0.00 4.70
106 107 6.068735 TGGAAGGTTATAAAGGAAGGGCATTA 60.069 38.462 0.00 0.00 0.00 1.90
135 136 2.003196 ACAAAAGTGTGTTTTGGCCG 57.997 45.000 13.28 0.00 42.09 6.13
136 137 4.118093 AGTACAAAAGTGTGTTTTGGCC 57.882 40.909 13.28 0.00 42.09 5.36
176 177 5.357742 AATTTTATGGGGGTTTGATCTGC 57.642 39.130 0.00 0.00 0.00 4.26
192 193 9.360901 TGGCATATGAAAGCTACCATAATTTTA 57.639 29.630 6.97 0.00 0.00 1.52
193 194 8.248904 TGGCATATGAAAGCTACCATAATTTT 57.751 30.769 6.97 0.00 0.00 1.82
194 195 7.838079 TGGCATATGAAAGCTACCATAATTT 57.162 32.000 6.97 0.00 0.00 1.82
195 196 9.705103 ATATGGCATATGAAAGCTACCATAATT 57.295 29.630 18.87 3.31 40.86 1.40
198 199 9.836864 CTTATATGGCATATGAAAGCTACCATA 57.163 33.333 26.37 11.89 41.51 2.74
248 259 2.203408 GGCATCAAGGCTAGGGGC 60.203 66.667 0.00 0.00 40.24 5.80
285 296 8.293867 GTGACAAAAATGCACTTTACATAGGTA 58.706 33.333 0.00 0.00 0.00 3.08
313 324 4.746702 GCCACATATATGGTTGGTAGTGCT 60.747 45.833 16.96 0.00 42.28 4.40
330 341 3.403228 AGGATTTTACCATGGCCACAT 57.597 42.857 8.16 0.00 37.99 3.21
334 345 6.731292 ATTTCTTAGGATTTTACCATGGCC 57.269 37.500 13.04 3.33 0.00 5.36
358 369 2.434336 TGGCATCGTAAGGCTAATCTGT 59.566 45.455 0.00 0.00 38.47 3.41
372 383 2.286595 CCATCGATCAAAGTTGGCATCG 60.287 50.000 0.00 8.18 36.69 3.84
381 392 4.054671 GAGCTTCCTACCATCGATCAAAG 58.945 47.826 0.00 0.00 0.00 2.77
432 443 3.411351 CCGGTTTGCACGTCCGAG 61.411 66.667 20.22 9.86 46.05 4.63
472 483 6.430000 GTCTAAACACTTTGAGCCCTTCAATA 59.570 38.462 0.00 0.00 44.90 1.90
473 484 5.241728 GTCTAAACACTTTGAGCCCTTCAAT 59.758 40.000 0.00 0.00 44.90 2.57
493 504 0.178984 TGTCCGGACTGTGTGGTCTA 60.179 55.000 33.39 8.02 36.55 2.59
494 505 0.832135 ATGTCCGGACTGTGTGGTCT 60.832 55.000 33.39 5.88 36.55 3.85
501 512 1.403780 GCTCGTAAATGTCCGGACTGT 60.404 52.381 33.39 20.16 0.00 3.55
503 514 0.892755 TGCTCGTAAATGTCCGGACT 59.107 50.000 33.39 17.54 0.00 3.85
529 540 8.888579 ACAATAAGGGTATCTTCAAACGATAG 57.111 34.615 0.00 0.00 36.93 2.08
564 577 8.237811 AGATTTGGTGGTATGAAACATTATCC 57.762 34.615 0.00 0.00 0.00 2.59
615 628 0.538516 TATGCCCCGCAAGTTGTTGT 60.539 50.000 4.48 0.00 43.62 3.32
797 844 0.602372 GATCTCCAGGCTGGCGATTC 60.602 60.000 33.10 23.35 41.66 2.52
904 954 2.167219 CCATAGCGGTGTCGTGCTG 61.167 63.158 0.00 0.00 42.46 4.41
905 955 1.884075 TTCCATAGCGGTGTCGTGCT 61.884 55.000 0.00 0.00 45.04 4.40
906 956 0.810031 ATTCCATAGCGGTGTCGTGC 60.810 55.000 0.00 0.00 38.89 5.34
948 1004 2.148052 TGGGGACGGGCAAACAGTA 61.148 57.895 0.00 0.00 0.00 2.74
967 1023 6.434340 TGTGTGTATAGGTAGGCTGATGATAG 59.566 42.308 0.00 0.00 0.00 2.08
968 1024 6.208797 GTGTGTGTATAGGTAGGCTGATGATA 59.791 42.308 0.00 0.00 0.00 2.15
969 1025 5.011125 GTGTGTGTATAGGTAGGCTGATGAT 59.989 44.000 0.00 0.00 0.00 2.45
970 1026 4.341235 GTGTGTGTATAGGTAGGCTGATGA 59.659 45.833 0.00 0.00 0.00 2.92
972 1028 3.641906 GGTGTGTGTATAGGTAGGCTGAT 59.358 47.826 0.00 0.00 0.00 2.90
974 1030 2.764010 TGGTGTGTGTATAGGTAGGCTG 59.236 50.000 0.00 0.00 0.00 4.85
975 1031 3.031736 CTGGTGTGTGTATAGGTAGGCT 58.968 50.000 0.00 0.00 0.00 4.58
976 1032 2.483188 GCTGGTGTGTGTATAGGTAGGC 60.483 54.545 0.00 0.00 0.00 3.93
977 1033 2.102588 GGCTGGTGTGTGTATAGGTAGG 59.897 54.545 0.00 0.00 0.00 3.18
978 1034 2.102588 GGGCTGGTGTGTGTATAGGTAG 59.897 54.545 0.00 0.00 0.00 3.18
979 1035 2.112998 GGGCTGGTGTGTGTATAGGTA 58.887 52.381 0.00 0.00 0.00 3.08
980 1036 0.909623 GGGCTGGTGTGTGTATAGGT 59.090 55.000 0.00 0.00 0.00 3.08
981 1037 0.908910 TGGGCTGGTGTGTGTATAGG 59.091 55.000 0.00 0.00 0.00 2.57
982 1038 2.564771 CATGGGCTGGTGTGTGTATAG 58.435 52.381 0.00 0.00 0.00 1.31
1057 1124 3.898509 CCTCGGAGCAGAGCGGAG 61.899 72.222 0.00 0.00 36.95 4.63
1061 1128 4.863925 GACGCCTCGGAGCAGAGC 62.864 72.222 0.00 0.00 36.95 4.09
1062 1129 4.544689 CGACGCCTCGGAGCAGAG 62.545 72.222 0.00 0.00 36.16 3.35
1180 1247 2.301870 CAGTGTAGCAGTACCTTTGGGA 59.698 50.000 0.00 0.00 36.25 4.37
1243 1322 5.973565 GGAAATCAAATTGCGGATAACTGAG 59.026 40.000 0.00 0.00 0.00 3.35
1299 1378 3.092301 CTCCTTTTTGAGATGGGGAACC 58.908 50.000 0.00 0.00 42.60 3.62
1300 1379 3.507622 CACTCCTTTTTGAGATGGGGAAC 59.492 47.826 0.00 0.00 36.22 3.62
1302 1381 2.986019 TCACTCCTTTTTGAGATGGGGA 59.014 45.455 0.00 0.00 36.22 4.81
1303 1382 3.350833 CTCACTCCTTTTTGAGATGGGG 58.649 50.000 0.00 0.00 41.65 4.96
1304 1383 2.751806 GCTCACTCCTTTTTGAGATGGG 59.248 50.000 2.77 0.00 41.65 4.00
1305 1384 3.190118 GTGCTCACTCCTTTTTGAGATGG 59.810 47.826 2.77 0.00 41.65 3.51
1306 1385 3.120408 CGTGCTCACTCCTTTTTGAGATG 60.120 47.826 2.77 0.00 41.65 2.90
1307 1386 3.070018 CGTGCTCACTCCTTTTTGAGAT 58.930 45.455 2.77 0.00 41.65 2.75
1308 1387 2.483876 CGTGCTCACTCCTTTTTGAGA 58.516 47.619 2.77 0.00 41.65 3.27
1309 1388 1.069636 GCGTGCTCACTCCTTTTTGAG 60.070 52.381 0.00 0.00 41.96 3.02
1310 1389 0.944386 GCGTGCTCACTCCTTTTTGA 59.056 50.000 0.00 0.00 0.00 2.69
1313 1392 1.537202 GAATGCGTGCTCACTCCTTTT 59.463 47.619 0.00 0.00 0.00 2.27
1324 1403 3.592381 ACGAATAGAATGAATGCGTGC 57.408 42.857 0.00 0.00 37.23 5.34
1332 1411 5.309638 TGTGGGAACAAACGAATAGAATGA 58.690 37.500 0.00 0.00 46.06 2.57
1343 1422 4.035091 GCCAAAAATCTTGTGGGAACAAAC 59.965 41.667 0.00 0.00 46.06 2.93
1370 1450 6.151480 ACTTCACTGTAGTTCTAGAAGTAGGC 59.849 42.308 18.46 9.84 42.55 3.93
1378 1458 5.411977 TCTCGGAACTTCACTGTAGTTCTAG 59.588 44.000 21.30 18.67 46.75 2.43
1392 1481 4.096682 CGAAGGAATACTCTCTCGGAACTT 59.903 45.833 0.00 0.00 0.00 2.66
1397 1486 1.950909 AGCGAAGGAATACTCTCTCGG 59.049 52.381 0.00 0.00 0.00 4.63
1398 1487 2.614520 TCAGCGAAGGAATACTCTCTCG 59.385 50.000 0.00 0.00 0.00 4.04
1402 1491 7.113658 TCTATTTTCAGCGAAGGAATACTCT 57.886 36.000 0.00 0.00 0.00 3.24
1415 1504 5.106118 GGGAACTCCACTTTCTATTTTCAGC 60.106 44.000 0.00 0.00 37.91 4.26
1421 1510 4.846940 AGACAGGGAACTCCACTTTCTATT 59.153 41.667 0.00 0.00 40.21 1.73
1422 1511 4.223923 CAGACAGGGAACTCCACTTTCTAT 59.776 45.833 0.00 0.00 40.21 1.98
1423 1512 3.578716 CAGACAGGGAACTCCACTTTCTA 59.421 47.826 0.00 0.00 40.21 2.10
1429 1518 2.171341 GTTCAGACAGGGAACTCCAC 57.829 55.000 0.00 0.00 41.05 4.02
1439 1528 2.724349 GCAGTTTGCAAGTTCAGACAG 58.276 47.619 0.00 0.00 44.26 3.51
1441 1530 1.064060 ACGCAGTTTGCAAGTTCAGAC 59.936 47.619 0.00 0.00 45.36 3.51
1466 1555 7.949696 AGACCTGAGGGAGTATATCTCAATAT 58.050 38.462 2.38 0.00 44.40 1.28
1467 1556 7.240828 AGAGACCTGAGGGAGTATATCTCAATA 59.759 40.741 13.41 0.00 44.40 1.90
1472 1561 6.795507 TCTTAGAGACCTGAGGGAGTATATCT 59.204 42.308 2.38 0.00 36.25 1.98
1475 1564 5.221682 CGTCTTAGAGACCTGAGGGAGTATA 60.222 48.000 2.38 0.00 42.12 1.47
1476 1565 4.445162 CGTCTTAGAGACCTGAGGGAGTAT 60.445 50.000 2.38 0.00 42.12 2.12
1480 1569 1.634459 ACGTCTTAGAGACCTGAGGGA 59.366 52.381 2.38 0.00 42.12 4.20
1481 1570 2.018515 GACGTCTTAGAGACCTGAGGG 58.981 57.143 8.70 0.00 42.12 4.30
1482 1571 2.993937 AGACGTCTTAGAGACCTGAGG 58.006 52.381 13.58 0.00 42.12 3.86
1483 1572 7.972832 ATATAAGACGTCTTAGAGACCTGAG 57.027 40.000 34.13 0.00 42.12 3.35
1484 1573 7.991460 TCAATATAAGACGTCTTAGAGACCTGA 59.009 37.037 34.13 26.58 42.12 3.86
1485 1574 8.155821 TCAATATAAGACGTCTTAGAGACCTG 57.844 38.462 34.13 25.28 42.12 4.00
1486 1575 8.788806 CATCAATATAAGACGTCTTAGAGACCT 58.211 37.037 34.13 22.50 42.12 3.85
1487 1576 8.784994 TCATCAATATAAGACGTCTTAGAGACC 58.215 37.037 34.13 0.58 42.12 3.85
1490 1579 9.952188 TGTTCATCAATATAAGACGTCTTAGAG 57.048 33.333 34.13 24.58 41.24 2.43
1491 1580 9.952188 CTGTTCATCAATATAAGACGTCTTAGA 57.048 33.333 34.13 31.65 41.24 2.10
1492 1581 9.952188 TCTGTTCATCAATATAAGACGTCTTAG 57.048 33.333 34.13 23.73 41.24 2.18
1493 1582 9.952188 CTCTGTTCATCAATATAAGACGTCTTA 57.048 33.333 33.62 33.62 42.04 2.10
1494 1583 7.923344 CCTCTGTTCATCAATATAAGACGTCTT 59.077 37.037 31.70 31.70 39.85 3.01
1495 1584 7.429633 CCTCTGTTCATCAATATAAGACGTCT 58.570 38.462 13.58 13.58 0.00 4.18
1496 1585 6.642950 CCCTCTGTTCATCAATATAAGACGTC 59.357 42.308 7.70 7.70 0.00 4.34
1497 1586 6.323996 TCCCTCTGTTCATCAATATAAGACGT 59.676 38.462 0.00 0.00 0.00 4.34
1498 1587 6.749139 TCCCTCTGTTCATCAATATAAGACG 58.251 40.000 0.00 0.00 0.00 4.18
1499 1588 7.731054 ACTCCCTCTGTTCATCAATATAAGAC 58.269 38.462 0.00 0.00 0.00 3.01
1500 1589 7.921041 ACTCCCTCTGTTCATCAATATAAGA 57.079 36.000 0.00 0.00 0.00 2.10
1501 1590 9.868277 GATACTCCCTCTGTTCATCAATATAAG 57.132 37.037 0.00 0.00 0.00 1.73
1502 1591 9.379770 TGATACTCCCTCTGTTCATCAATATAA 57.620 33.333 0.00 0.00 0.00 0.98
1503 1592 8.956446 TGATACTCCCTCTGTTCATCAATATA 57.044 34.615 0.00 0.00 0.00 0.86
1504 1593 7.038445 CCTGATACTCCCTCTGTTCATCAATAT 60.038 40.741 0.00 0.00 0.00 1.28
1505 1594 6.268617 CCTGATACTCCCTCTGTTCATCAATA 59.731 42.308 0.00 0.00 0.00 1.90
1506 1595 5.071519 CCTGATACTCCCTCTGTTCATCAAT 59.928 44.000 0.00 0.00 0.00 2.57
1507 1596 4.406972 CCTGATACTCCCTCTGTTCATCAA 59.593 45.833 0.00 0.00 0.00 2.57
1508 1597 3.963374 CCTGATACTCCCTCTGTTCATCA 59.037 47.826 0.00 0.00 0.00 3.07
1509 1598 3.323403 CCCTGATACTCCCTCTGTTCATC 59.677 52.174 0.00 0.00 0.00 2.92
1510 1599 3.310954 ACCCTGATACTCCCTCTGTTCAT 60.311 47.826 0.00 0.00 0.00 2.57
1511 1600 2.044492 ACCCTGATACTCCCTCTGTTCA 59.956 50.000 0.00 0.00 0.00 3.18
1512 1601 2.753247 ACCCTGATACTCCCTCTGTTC 58.247 52.381 0.00 0.00 0.00 3.18
1513 1602 2.950990 ACCCTGATACTCCCTCTGTT 57.049 50.000 0.00 0.00 0.00 3.16
1514 1603 4.561254 ATTACCCTGATACTCCCTCTGT 57.439 45.455 0.00 0.00 0.00 3.41
1515 1604 7.288852 CCATATATTACCCTGATACTCCCTCTG 59.711 44.444 0.00 0.00 0.00 3.35
1516 1605 7.188454 TCCATATATTACCCTGATACTCCCTCT 59.812 40.741 0.00 0.00 0.00 3.69
1517 1606 7.363031 TCCATATATTACCCTGATACTCCCTC 58.637 42.308 0.00 0.00 0.00 4.30
1518 1607 7.312162 TCCATATATTACCCTGATACTCCCT 57.688 40.000 0.00 0.00 0.00 4.20
1519 1608 8.568617 AATCCATATATTACCCTGATACTCCC 57.431 38.462 0.00 0.00 0.00 4.30
1548 1637 5.336372 GGCAAGAACACAGTATGGCAAATAA 60.336 40.000 0.00 0.00 43.62 1.40
1555 1644 1.470098 GCAGGCAAGAACACAGTATGG 59.530 52.381 0.00 0.00 43.62 2.74
1559 1648 0.471617 AGAGCAGGCAAGAACACAGT 59.528 50.000 0.00 0.00 0.00 3.55
1560 1649 1.602311 AAGAGCAGGCAAGAACACAG 58.398 50.000 0.00 0.00 0.00 3.66
1583 1672 3.634910 GGCAAGAACACAGTTCCCTAAAA 59.365 43.478 6.29 0.00 0.00 1.52
1585 1674 2.441750 AGGCAAGAACACAGTTCCCTAA 59.558 45.455 6.29 0.00 0.00 2.69
1587 1676 0.846693 AGGCAAGAACACAGTTCCCT 59.153 50.000 6.29 3.82 0.00 4.20
1588 1677 0.954452 CAGGCAAGAACACAGTTCCC 59.046 55.000 6.29 1.71 0.00 3.97
1589 1678 0.312102 GCAGGCAAGAACACAGTTCC 59.688 55.000 6.29 0.00 0.00 3.62
1590 1679 1.312815 AGCAGGCAAGAACACAGTTC 58.687 50.000 1.77 1.77 0.00 3.01
1591 1680 1.406539 CAAGCAGGCAAGAACACAGTT 59.593 47.619 0.00 0.00 0.00 3.16
1592 1681 1.027357 CAAGCAGGCAAGAACACAGT 58.973 50.000 0.00 0.00 0.00 3.55
1593 1682 0.313043 CCAAGCAGGCAAGAACACAG 59.687 55.000 0.00 0.00 0.00 3.66
1596 1685 1.108727 CCACCAAGCAGGCAAGAACA 61.109 55.000 0.00 0.00 43.14 3.18
1597 1686 1.662044 CCACCAAGCAGGCAAGAAC 59.338 57.895 0.00 0.00 43.14 3.01
1598 1687 4.179361 CCACCAAGCAGGCAAGAA 57.821 55.556 0.00 0.00 43.14 2.52
1606 1695 0.818938 CATTATGCTGCCACCAAGCA 59.181 50.000 0.00 0.00 43.04 3.91
1607 1696 0.529119 GCATTATGCTGCCACCAAGC 60.529 55.000 10.27 0.00 40.96 4.01
1608 1697 3.654178 GCATTATGCTGCCACCAAG 57.346 52.632 10.27 0.00 40.96 3.61
1615 1704 4.778534 ATTAGACATGGCATTATGCTGC 57.221 40.909 17.13 1.78 44.28 5.25
1616 1705 8.971321 GTAAAAATTAGACATGGCATTATGCTG 58.029 33.333 17.13 10.70 44.28 4.41
1617 1706 8.917088 AGTAAAAATTAGACATGGCATTATGCT 58.083 29.630 17.13 0.00 44.28 3.79
1618 1707 9.185192 GAGTAAAAATTAGACATGGCATTATGC 57.815 33.333 8.93 8.93 44.08 3.14
1619 1708 9.385902 CGAGTAAAAATTAGACATGGCATTATG 57.614 33.333 0.00 0.00 0.00 1.90
1621 1710 8.725405 TCGAGTAAAAATTAGACATGGCATTA 57.275 30.769 0.00 0.00 0.00 1.90
1637 1859 8.755977 AGTTGTATAGGAATTCCTCGAGTAAAA 58.244 33.333 30.35 16.24 44.77 1.52
1641 1863 6.793505 AAGTTGTATAGGAATTCCTCGAGT 57.206 37.500 30.35 15.52 44.77 4.18
1642 1864 7.222999 GTGAAAGTTGTATAGGAATTCCTCGAG 59.777 40.741 30.35 5.13 44.77 4.04
1643 1865 7.039882 GTGAAAGTTGTATAGGAATTCCTCGA 58.960 38.462 30.35 14.92 44.77 4.04
1645 1867 7.110155 TGGTGAAAGTTGTATAGGAATTCCTC 58.890 38.462 30.35 16.71 44.77 3.71
1647 1869 7.696992 TTGGTGAAAGTTGTATAGGAATTCC 57.303 36.000 17.31 17.31 0.00 3.01
1684 1907 1.337260 CGTGCACTCTGAGCCTTAAGT 60.337 52.381 16.19 0.00 0.00 2.24
1700 1923 5.088739 CACAAATTAATGAAGGACTCGTGC 58.911 41.667 0.00 0.00 0.00 5.34
1703 1926 8.122952 GGATAACACAAATTAATGAAGGACTCG 58.877 37.037 0.00 0.00 0.00 4.18
1737 1960 8.326680 AGTAGACTATCGATCTTTAAGGCTAC 57.673 38.462 22.58 22.58 45.31 3.58
1755 1978 8.832521 CGAATTGTCTATTACTGAGAGTAGACT 58.167 37.037 17.37 5.24 42.09 3.24
1779 2002 2.778299 AGCTTTGTTGATACTTGGCGA 58.222 42.857 0.00 0.00 0.00 5.54
1780 2003 3.684788 AGTAGCTTTGTTGATACTTGGCG 59.315 43.478 0.00 0.00 35.92 5.69
1781 2004 4.095036 GGAGTAGCTTTGTTGATACTTGGC 59.905 45.833 0.00 0.00 38.98 4.52
1782 2005 4.636206 GGGAGTAGCTTTGTTGATACTTGG 59.364 45.833 0.00 0.00 38.98 3.61
1784 2007 5.338463 GGAGGGAGTAGCTTTGTTGATACTT 60.338 44.000 0.00 0.00 38.98 2.24
1785 2008 4.162509 GGAGGGAGTAGCTTTGTTGATACT 59.837 45.833 0.00 0.00 41.18 2.12
1786 2009 4.443621 GGAGGGAGTAGCTTTGTTGATAC 58.556 47.826 0.00 0.00 0.00 2.24
1787 2010 3.132289 CGGAGGGAGTAGCTTTGTTGATA 59.868 47.826 0.00 0.00 0.00 2.15
1788 2011 2.093447 CGGAGGGAGTAGCTTTGTTGAT 60.093 50.000 0.00 0.00 0.00 2.57
1789 2012 1.275291 CGGAGGGAGTAGCTTTGTTGA 59.725 52.381 0.00 0.00 0.00 3.18
1790 2013 1.002087 ACGGAGGGAGTAGCTTTGTTG 59.998 52.381 0.00 0.00 0.00 3.33
1791 2014 1.349067 ACGGAGGGAGTAGCTTTGTT 58.651 50.000 0.00 0.00 0.00 2.83
1792 2015 1.275573 GAACGGAGGGAGTAGCTTTGT 59.724 52.381 0.00 0.00 0.00 2.83
1793 2016 1.405661 GGAACGGAGGGAGTAGCTTTG 60.406 57.143 0.00 0.00 0.00 2.77
1794 2017 0.903236 GGAACGGAGGGAGTAGCTTT 59.097 55.000 0.00 0.00 0.00 3.51
1795 2018 0.252103 TGGAACGGAGGGAGTAGCTT 60.252 55.000 0.00 0.00 0.00 3.74
1796 2019 0.252103 TTGGAACGGAGGGAGTAGCT 60.252 55.000 0.00 0.00 0.00 3.32
1843 2083 9.328845 CCCAACTTTGTACTAACTTTGTACTAA 57.671 33.333 12.73 10.75 40.44 2.24
1844 2084 8.485392 ACCCAACTTTGTACTAACTTTGTACTA 58.515 33.333 12.73 4.86 40.44 1.82
1845 2085 7.341030 ACCCAACTTTGTACTAACTTTGTACT 58.659 34.615 12.73 0.00 40.44 2.73
1846 2086 7.280652 TGACCCAACTTTGTACTAACTTTGTAC 59.719 37.037 6.58 6.58 40.27 2.90
1847 2087 7.337167 TGACCCAACTTTGTACTAACTTTGTA 58.663 34.615 0.00 0.00 0.00 2.41
1848 2088 6.181908 TGACCCAACTTTGTACTAACTTTGT 58.818 36.000 0.00 0.00 0.00 2.83
1849 2089 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
1850 2090 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
1851 2091 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
1852 2092 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
1853 2093 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
1854 2094 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
1855 2095 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
1856 2096 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
1857 2097 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
1858 2098 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
1859 2099 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
1860 2100 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
1861 2101 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1862 2102 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1863 2103 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1864 2104 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
1865 2105 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
1866 2106 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
1867 2107 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
1868 2108 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
1869 2109 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1870 2110 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1871 2111 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1872 2112 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1873 2113 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1874 2114 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1875 2115 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
1876 2116 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
1877 2117 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
1878 2118 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
1879 2119 2.905415 TAGTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
1880 2120 2.827921 GTTTAGTACTCCCTCCGTTCCA 59.172 50.000 0.00 0.00 0.00 3.53
1881 2121 2.827921 TGTTTAGTACTCCCTCCGTTCC 59.172 50.000 0.00 0.00 0.00 3.62
1882 2122 4.732672 ATGTTTAGTACTCCCTCCGTTC 57.267 45.455 0.00 0.00 0.00 3.95
1883 2123 4.323257 CCAATGTTTAGTACTCCCTCCGTT 60.323 45.833 0.00 0.00 0.00 4.44
1884 2124 3.197116 CCAATGTTTAGTACTCCCTCCGT 59.803 47.826 0.00 0.00 0.00 4.69
1885 2125 3.449737 TCCAATGTTTAGTACTCCCTCCG 59.550 47.826 0.00 0.00 0.00 4.63
1886 2126 4.683671 GCTCCAATGTTTAGTACTCCCTCC 60.684 50.000 0.00 0.00 0.00 4.30
1887 2127 4.081087 TGCTCCAATGTTTAGTACTCCCTC 60.081 45.833 0.00 0.00 0.00 4.30
1888 2128 3.844211 TGCTCCAATGTTTAGTACTCCCT 59.156 43.478 0.00 0.00 0.00 4.20
1889 2129 4.216411 TGCTCCAATGTTTAGTACTCCC 57.784 45.455 0.00 0.00 0.00 4.30
1890 2130 4.816925 GGATGCTCCAATGTTTAGTACTCC 59.183 45.833 0.00 0.00 36.28 3.85
1891 2131 5.428253 TGGATGCTCCAATGTTTAGTACTC 58.572 41.667 0.00 0.00 45.00 2.59
1892 2132 5.435686 TGGATGCTCCAATGTTTAGTACT 57.564 39.130 0.00 0.00 45.00 2.73
2010 2262 8.182227 GCTCACTTTAACCTACCATTTCAATAC 58.818 37.037 0.00 0.00 0.00 1.89
2048 2300 5.354792 TGTTGGTACTGTTTTAGTTGTGGAC 59.645 40.000 0.00 0.00 40.89 4.02
2250 2502 2.547990 GGTTCCTCCACTTCCTCCTAA 58.452 52.381 0.00 0.00 35.97 2.69
2376 2628 8.237267 GTCAACAACTGAAGGAAATAATACCAG 58.763 37.037 0.00 0.00 35.22 4.00
2384 2636 6.623549 CGCATATGTCAACAACTGAAGGAAAT 60.624 38.462 4.29 0.00 35.22 2.17
2459 2711 0.611200 TCCCATATACCATTCCGGCG 59.389 55.000 0.00 0.00 39.03 6.46
2473 2725 6.564099 TCATTGGAAGCCATTAATATCCCAT 58.436 36.000 0.00 0.00 31.53 4.00
2494 2746 7.514784 TTTGTGTCTGTTTCATCTGATTCAT 57.485 32.000 0.00 0.00 0.00 2.57
2576 2828 5.167303 ACCCTTCTTTGTTCAGTCTATCC 57.833 43.478 0.00 0.00 0.00 2.59
2905 3158 4.787135 TGCCATGATACCTCCAACAATA 57.213 40.909 0.00 0.00 0.00 1.90
2980 3233 0.623723 TATCCAAGGCCCCAACACTC 59.376 55.000 0.00 0.00 0.00 3.51
3042 3295 9.987272 CATTATGTATGTGGATCTTTCTGTCTA 57.013 33.333 0.00 0.00 0.00 2.59
3216 3470 7.592885 TCCTAGCGTATTAATCTGGTAAACT 57.407 36.000 0.00 0.00 0.00 2.66
3300 3562 7.168022 TCATCCTACCCCTCTCCTATATATG 57.832 44.000 0.00 0.00 0.00 1.78
3380 3645 7.222000 ACTTGTTAGAGACTCCTGTTTAGAG 57.778 40.000 0.00 0.00 37.39 2.43
3554 3820 1.153469 TGCACGCTCATGCCGAATA 60.153 52.632 11.67 0.00 45.50 1.75
3615 3883 2.822561 TCTCGTTTGCATAATTTGGCCA 59.177 40.909 0.00 0.00 0.00 5.36
3626 3894 3.170791 TGCCAATTTTTCTCGTTTGCA 57.829 38.095 0.00 0.00 0.00 4.08
3652 3920 1.268999 TGTGCTTGAAAAATTCGCGCT 60.269 42.857 5.56 0.00 30.93 5.92
3868 4137 8.603304 ACAAGTGGGAGACTATATAAACTGTTT 58.397 33.333 10.98 10.98 33.09 2.83
3871 4140 7.070074 AGGACAAGTGGGAGACTATATAAACTG 59.930 40.741 0.00 0.00 33.09 3.16
3883 4152 2.704190 AGAAGAGGACAAGTGGGAGA 57.296 50.000 0.00 0.00 0.00 3.71
4057 4410 8.674559 GTGAAATCCTCATAAATAGCGGCACG 62.675 46.154 1.45 0.00 46.98 5.34
4151 4505 4.895297 AGCAAATTTCTTGTTCTCCTCCAA 59.105 37.500 0.00 0.00 0.00 3.53
4404 4758 5.819901 AGCCAATCAGCTTAGTTCATTCTAC 59.180 40.000 0.00 0.00 41.41 2.59
4406 4760 4.853007 AGCCAATCAGCTTAGTTCATTCT 58.147 39.130 0.00 0.00 41.41 2.40
4443 4797 7.819900 GGATCGTTTATATGATAAGGAAGCAGT 59.180 37.037 0.00 0.00 30.08 4.40
4636 4990 3.294214 GTCTTGCATCAGGGAAATCCAT 58.706 45.455 1.22 0.00 38.24 3.41
4903 5257 6.719829 TCACTCACAACTATCTTGACCTCTTA 59.280 38.462 0.00 0.00 0.00 2.10
5056 5410 4.588899 CACCATTTCTATGTGTCCTTGGA 58.411 43.478 0.00 0.00 0.00 3.53
5065 5419 2.094675 GTGCTGGCACCATTTCTATGT 58.905 47.619 14.03 0.00 40.79 2.29
5103 5457 4.934797 TGGAATCTCTTTCTGTTCCCAT 57.065 40.909 0.00 0.00 39.45 4.00
5215 5593 8.110612 GCATTAAGTATTTGGTGATCGATATCG 58.889 37.037 19.14 19.14 41.45 2.92
5222 5600 8.311650 ACGATAGCATTAAGTATTTGGTGATC 57.688 34.615 0.00 0.00 42.67 2.92
5407 5795 5.811613 GCACACCGGTACTATAATGTGTAAA 59.188 40.000 6.87 0.00 39.65 2.01
5434 5822 7.223584 TCTGACCTTTCACAGTTATTTCATCA 58.776 34.615 0.00 0.00 35.84 3.07
5476 5864 5.435686 TCGGAATGCTTATTATGCCCTAT 57.564 39.130 0.00 0.00 0.00 2.57
5548 5936 3.390135 CAAACAAGGAGACAACGAGCTA 58.610 45.455 0.00 0.00 0.00 3.32
5554 5942 1.268539 CGTGCCAAACAAGGAGACAAC 60.269 52.381 0.00 0.00 0.00 3.32
5654 6042 2.083774 CTGCCGGCATTGAAGAGTAAA 58.916 47.619 32.87 0.92 0.00 2.01
5669 6057 2.535574 GTCTTTTGCAAAGTTTCTGCCG 59.464 45.455 12.41 0.00 39.13 5.69
5671 6059 5.529014 TTTGTCTTTTGCAAAGTTTCTGC 57.471 34.783 12.41 1.28 40.35 4.26
5775 6163 2.222027 CCACCAGCTTCTTCGAACTTT 58.778 47.619 0.00 0.00 0.00 2.66
5934 6324 5.684550 ACAAAAGAATGAACTCCGTTACC 57.315 39.130 0.00 0.00 0.00 2.85
5971 6361 3.828875 AACTCCCAGCTATACTCAAGC 57.171 47.619 0.00 0.00 40.40 4.01
5987 6377 8.704234 CGACCTAAATTAGCATCTCATTAACTC 58.296 37.037 0.00 0.00 0.00 3.01
6045 6435 2.953648 TCTACGAAATGGATCGGTAGCA 59.046 45.455 1.59 0.00 46.82 3.49
6073 6463 4.540824 GCTTCCAGCTGTTTAAGAAAGTG 58.459 43.478 19.36 4.67 38.45 3.16
6090 6480 2.302733 ACCACAAAATCCAATGGCTTCC 59.697 45.455 0.00 0.00 35.49 3.46
6147 6537 7.645058 TTCTTCCAAATTCTGTCTGAAGTTT 57.355 32.000 2.81 0.24 40.44 2.66
6162 6552 2.632512 GCCCATTCCAGTTTCTTCCAAA 59.367 45.455 0.00 0.00 0.00 3.28
6210 6600 5.689819 GGATGCAACATGTATCCGATAAAC 58.310 41.667 9.80 0.00 46.75 2.01
6247 6637 8.967218 GCATTTTTCATGTGCGTATTATATGTT 58.033 29.630 0.00 0.00 0.00 2.71
6251 6641 6.139435 CGGCATTTTTCATGTGCGTATTATA 58.861 36.000 0.00 0.00 39.69 0.98
6252 6642 4.975502 CGGCATTTTTCATGTGCGTATTAT 59.024 37.500 0.00 0.00 39.69 1.28
6262 6652 6.949578 AAATTCAGTACGGCATTTTTCATG 57.050 33.333 0.00 0.00 0.00 3.07
6272 6662 9.394477 GAAATTATATCCAAAATTCAGTACGGC 57.606 33.333 0.00 0.00 0.00 5.68
6294 6684 5.116180 TCACGAAGTCACTGAAACAGAAAT 58.884 37.500 5.76 0.00 41.61 2.17
6349 6745 3.614092 TCAGACATGCAAATCTTCCCTC 58.386 45.455 0.00 0.00 0.00 4.30
6350 6746 3.726557 TCAGACATGCAAATCTTCCCT 57.273 42.857 0.00 0.00 0.00 4.20
6389 6785 2.487934 ACACACACTCAGATGCAGAAC 58.512 47.619 0.00 0.00 0.00 3.01
6393 6789 2.618442 TGAACACACACTCAGATGCA 57.382 45.000 0.00 0.00 0.00 3.96
6398 6794 3.535561 ACTTCCTTGAACACACACTCAG 58.464 45.455 0.00 0.00 0.00 3.35
6504 6900 5.383476 CCTTCTTCTGGATTGAAGGCATAT 58.617 41.667 14.82 0.00 46.62 1.78
6510 6906 1.399791 GCGCCTTCTTCTGGATTGAAG 59.600 52.381 0.00 0.00 43.36 3.02
6594 6990 2.258286 GCCGTCTTTGCGCCAATT 59.742 55.556 4.18 0.00 0.00 2.32
6741 7137 7.281774 ACATGATTTATCAAGACACCATCTGTC 59.718 37.037 0.00 0.00 43.03 3.51
6827 7225 1.337823 CCGGTTCGTGTTCTTCAGGAT 60.338 52.381 0.00 0.00 40.03 3.24
6918 7316 2.563179 AGAGACATGCGTTTGTACTCCT 59.437 45.455 0.00 0.00 30.58 3.69
7053 7451 4.474303 TTATGGGACCGAGGGAGTATTA 57.526 45.455 0.00 0.00 0.00 0.98
7054 7452 3.339713 TTATGGGACCGAGGGAGTATT 57.660 47.619 0.00 0.00 0.00 1.89
7055 7453 3.562108 ATTATGGGACCGAGGGAGTAT 57.438 47.619 0.00 0.00 0.00 2.12
7056 7454 4.687262 ATATTATGGGACCGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
7057 7455 3.562108 ATATTATGGGACCGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
7058 7456 5.269991 TCTTATATTATGGGACCGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
7059 7457 5.279562 TCTTATATTATGGGACCGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
7060 7458 5.425539 ACATCTTATATTATGGGACCGAGGG 59.574 44.000 0.00 0.00 0.00 4.30
7061 7459 6.546428 ACATCTTATATTATGGGACCGAGG 57.454 41.667 0.00 0.00 0.00 4.63
7062 7460 8.848474 AAAACATCTTATATTATGGGACCGAG 57.152 34.615 0.00 0.00 0.00 4.63
7089 7487 9.695526 ACGTATTTTAACATTAGTGTAGTGTCA 57.304 29.630 0.00 0.00 37.67 3.58
7091 7489 9.918630 AGACGTATTTTAACATTAGTGTAGTGT 57.081 29.630 0.00 0.00 37.67 3.55
7114 7512 4.583489 TCCCTCCGTCTCATAATGTAAGAC 59.417 45.833 0.00 0.00 36.82 3.01
7115 7513 4.800023 TCCCTCCGTCTCATAATGTAAGA 58.200 43.478 0.00 0.00 0.00 2.10
7116 7514 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
7117 7515 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
7118 7516 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
7119 7517 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
7120 7518 5.531122 TTTACTCCCTCCGTCTCATAATG 57.469 43.478 0.00 0.00 0.00 1.90
7121 7519 5.897824 TCTTTTACTCCCTCCGTCTCATAAT 59.102 40.000 0.00 0.00 0.00 1.28
7122 7520 5.266788 TCTTTTACTCCCTCCGTCTCATAA 58.733 41.667 0.00 0.00 0.00 1.90
7123 7521 4.863548 TCTTTTACTCCCTCCGTCTCATA 58.136 43.478 0.00 0.00 0.00 2.15
7124 7522 3.709587 TCTTTTACTCCCTCCGTCTCAT 58.290 45.455 0.00 0.00 0.00 2.90
7125 7523 3.165087 TCTTTTACTCCCTCCGTCTCA 57.835 47.619 0.00 0.00 0.00 3.27
7126 7524 5.335035 CGATATCTTTTACTCCCTCCGTCTC 60.335 48.000 0.34 0.00 0.00 3.36
7127 7525 4.519730 CGATATCTTTTACTCCCTCCGTCT 59.480 45.833 0.34 0.00 0.00 4.18
7128 7526 4.518211 TCGATATCTTTTACTCCCTCCGTC 59.482 45.833 0.34 0.00 0.00 4.79
7129 7527 4.277921 GTCGATATCTTTTACTCCCTCCGT 59.722 45.833 0.34 0.00 0.00 4.69
7130 7528 4.613167 CGTCGATATCTTTTACTCCCTCCG 60.613 50.000 0.34 0.00 0.00 4.63
7131 7529 4.518211 TCGTCGATATCTTTTACTCCCTCC 59.482 45.833 0.34 0.00 0.00 4.30
7132 7530 5.686159 TCGTCGATATCTTTTACTCCCTC 57.314 43.478 0.34 0.00 0.00 4.30
7133 7531 6.096564 AGTTTCGTCGATATCTTTTACTCCCT 59.903 38.462 0.00 0.00 0.00 4.20
7134 7532 6.271566 AGTTTCGTCGATATCTTTTACTCCC 58.728 40.000 0.00 0.00 0.00 4.30
7138 7536 9.339492 CCCTATAGTTTCGTCGATATCTTTTAC 57.661 37.037 0.00 0.00 0.00 2.01
7329 7756 3.880047 ATGAAACACATGGGCTCATTG 57.120 42.857 0.00 1.48 37.87 2.82
7415 7842 4.515567 GGGGAGCCTCTCGTATTTTTATTG 59.484 45.833 0.00 0.00 0.00 1.90
7439 7866 4.159135 TGAGTACGGAATTCCTGGACTTAC 59.841 45.833 25.35 17.76 35.10 2.34
7501 7928 2.194271 GTACGCTCCTTGTGTATCTGC 58.806 52.381 0.00 0.00 42.68 4.26
7513 7943 2.396590 TCAAATTGAGGGTACGCTCC 57.603 50.000 30.50 16.76 0.00 4.70
7557 7987 1.003233 CTTTAGACCTGGGCGTCCTTT 59.997 52.381 7.97 0.00 32.91 3.11
7590 8020 1.201855 GCTTCGACAGCTGACGAATTG 60.202 52.381 39.50 31.92 46.80 2.32
7653 8176 4.981806 TTGTGGGATTAGCAAGCAATAC 57.018 40.909 0.00 0.00 0.00 1.89
7688 8211 5.523438 AGACTGTCCTTTATAGCTACAGC 57.477 43.478 9.87 0.00 37.37 4.40
7705 8228 6.146347 GCTCTTACAAGAAACACCTAAGACTG 59.854 42.308 0.00 0.00 34.03 3.51
7707 8230 5.989777 TGCTCTTACAAGAAACACCTAAGAC 59.010 40.000 0.00 0.00 34.03 3.01
7726 8249 1.228583 TCCGTGTCAGGTCTGCTCT 60.229 57.895 0.00 0.00 0.00 4.09
7745 8268 2.036475 AGTTCGCCTATCATGCCTAGTG 59.964 50.000 0.00 0.00 0.00 2.74
7755 8278 6.482308 ACAAATGTAATGGTAGTTCGCCTATC 59.518 38.462 0.00 0.00 0.00 2.08
7756 8279 6.354130 ACAAATGTAATGGTAGTTCGCCTAT 58.646 36.000 0.00 0.00 0.00 2.57
7783 8307 3.623510 GCCTTACTTGCCTCTGACAATAC 59.376 47.826 0.00 0.00 0.00 1.89
7999 8552 7.934457 AGTATGCTTGATAAATAACTGCCTTG 58.066 34.615 0.00 0.00 0.00 3.61
8026 8579 5.435686 TGGGAATATTCTTGCACAGTACT 57.564 39.130 14.95 0.00 0.00 2.73
8027 8580 5.009010 CCATGGGAATATTCTTGCACAGTAC 59.991 44.000 14.95 0.00 0.00 2.73
8028 8581 5.104151 TCCATGGGAATATTCTTGCACAGTA 60.104 40.000 13.02 0.00 0.00 2.74
8029 8582 3.956199 CCATGGGAATATTCTTGCACAGT 59.044 43.478 14.95 0.00 0.00 3.55
8052 8605 3.846588 TGGTATGCTTTCTCTCCCTCTTT 59.153 43.478 0.00 0.00 0.00 2.52
8053 8606 3.454858 TGGTATGCTTTCTCTCCCTCTT 58.545 45.455 0.00 0.00 0.00 2.85
8054 8607 3.121929 TGGTATGCTTTCTCTCCCTCT 57.878 47.619 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.