Multiple sequence alignment - TraesCS7B01G130900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G130900 chr7B 100.000 2614 0 0 1 2614 157807553 157810166 0.000000e+00 4828.0
1 TraesCS7B01G130900 chr7B 87.644 1732 112 49 549 2243 94118696 94117030 0.000000e+00 1919.0
2 TraesCS7B01G130900 chr7B 89.983 1188 80 20 955 2119 94186277 94185106 0.000000e+00 1498.0
3 TraesCS7B01G130900 chr7B 87.327 1302 80 25 601 1883 93650363 93651598 0.000000e+00 1411.0
4 TraesCS7B01G130900 chr7B 88.069 1165 75 23 549 1689 94051140 94050016 0.000000e+00 1323.0
5 TraesCS7B01G130900 chr7B 87.330 1176 89 32 732 1883 93571370 93572509 0.000000e+00 1291.0
6 TraesCS7B01G130900 chr7B 91.150 113 7 3 462 574 536260548 536260657 1.620000e-32 150.0
7 TraesCS7B01G130900 chr7B 79.208 202 19 11 2407 2608 93576526 93576704 4.570000e-23 119.0
8 TraesCS7B01G130900 chr7B 85.526 76 10 1 2408 2482 94142050 94141975 7.760000e-11 78.7
9 TraesCS7B01G130900 chr7D 91.850 2000 89 35 606 2598 194129131 194131063 0.000000e+00 2723.0
10 TraesCS7B01G130900 chr7D 88.418 1606 117 33 732 2326 132764683 132763136 0.000000e+00 1871.0
11 TraesCS7B01G130900 chr7D 88.008 1576 110 37 774 2326 132830976 132829457 0.000000e+00 1790.0
12 TraesCS7B01G130900 chr7D 86.125 1636 135 47 722 2326 132135502 132137076 0.000000e+00 1679.0
13 TraesCS7B01G130900 chr7D 87.665 1362 88 32 736 2075 132156996 132158299 0.000000e+00 1511.0
14 TraesCS7B01G130900 chr7D 86.214 1487 98 47 838 2296 132748001 132749408 0.000000e+00 1511.0
15 TraesCS7B01G130900 chr7D 86.209 1443 101 34 974 2402 132741220 132742578 0.000000e+00 1472.0
16 TraesCS7B01G130900 chr7D 94.940 415 20 1 1 415 23501918 23501505 0.000000e+00 649.0
17 TraesCS7B01G130900 chr7D 94.498 418 22 1 1 418 83854668 83854252 0.000000e+00 643.0
18 TraesCS7B01G130900 chr7D 82.558 258 17 8 2354 2608 132749406 132749638 4.410000e-48 202.0
19 TraesCS7B01G130900 chr7D 95.000 100 5 0 455 554 84803964 84803865 9.680000e-35 158.0
20 TraesCS7B01G130900 chr7A 91.913 1286 57 16 1307 2590 203697298 203698538 0.000000e+00 1755.0
21 TraesCS7B01G130900 chr7A 88.263 1295 120 16 963 2233 131187465 131186179 0.000000e+00 1520.0
22 TraesCS7B01G130900 chr7A 87.889 1222 101 22 1028 2239 131109277 131108093 0.000000e+00 1393.0
23 TraesCS7B01G130900 chr7A 88.951 1068 78 13 1276 2326 210252628 210253672 0.000000e+00 1282.0
24 TraesCS7B01G130900 chr7A 91.445 713 30 17 606 1311 203694829 203695517 0.000000e+00 950.0
25 TraesCS7B01G130900 chr7A 87.065 201 25 1 2127 2326 130783821 130784021 2.620000e-55 226.0
26 TraesCS7B01G130900 chr7A 86.765 204 26 1 2127 2329 131120114 131119911 2.620000e-55 226.0
27 TraesCS7B01G130900 chr7A 81.818 253 29 12 2354 2605 130894296 130894532 2.050000e-46 196.0
28 TraesCS7B01G130900 chr3B 100.000 415 0 0 1 415 414826659 414826245 0.000000e+00 767.0
29 TraesCS7B01G130900 chr6B 99.282 418 3 0 1 418 357275503 357275086 0.000000e+00 756.0
30 TraesCS7B01G130900 chr6B 98.554 415 5 1 1 415 696083747 696083334 0.000000e+00 732.0
31 TraesCS7B01G130900 chr6B 93.269 104 4 3 461 562 72175646 72175748 1.620000e-32 150.0
32 TraesCS7B01G130900 chr1A 99.041 417 4 0 1 417 482825908 482826324 0.000000e+00 749.0
33 TraesCS7B01G130900 chr3A 98.313 415 6 1 1 415 74439940 74439527 0.000000e+00 726.0
34 TraesCS7B01G130900 chr5D 95.444 417 18 1 1 417 446273354 446272939 0.000000e+00 664.0
35 TraesCS7B01G130900 chr6D 94.272 419 22 2 3 420 159515018 159515435 7.890000e-180 640.0
36 TraesCS7B01G130900 chr5B 81.225 506 53 12 965 1470 223252246 223252709 1.140000e-98 370.0
37 TraesCS7B01G130900 chr5B 94.175 103 5 1 454 555 54462155 54462257 3.480000e-34 156.0
38 TraesCS7B01G130900 chr5B 94.845 97 5 0 452 548 690335374 690335470 4.510000e-33 152.0
39 TraesCS7B01G130900 chr2B 95.918 98 1 3 458 555 357917554 357917648 3.480000e-34 156.0
40 TraesCS7B01G130900 chr2B 91.743 109 7 2 461 568 199403109 199403216 1.620000e-32 150.0
41 TraesCS7B01G130900 chr2A 96.703 91 3 0 462 552 715989405 715989495 4.510000e-33 152.0
42 TraesCS7B01G130900 chr1B 91.743 109 7 2 441 548 223360161 223360268 1.620000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G130900 chr7B 157807553 157810166 2613 False 4828.0 4828 100.000 1 2614 1 chr7B.!!$F4 2613
1 TraesCS7B01G130900 chr7B 94117030 94118696 1666 True 1919.0 1919 87.644 549 2243 1 chr7B.!!$R2 1694
2 TraesCS7B01G130900 chr7B 94185106 94186277 1171 True 1498.0 1498 89.983 955 2119 1 chr7B.!!$R4 1164
3 TraesCS7B01G130900 chr7B 93650363 93651598 1235 False 1411.0 1411 87.327 601 1883 1 chr7B.!!$F3 1282
4 TraesCS7B01G130900 chr7B 94050016 94051140 1124 True 1323.0 1323 88.069 549 1689 1 chr7B.!!$R1 1140
5 TraesCS7B01G130900 chr7B 93571370 93572509 1139 False 1291.0 1291 87.330 732 1883 1 chr7B.!!$F1 1151
6 TraesCS7B01G130900 chr7D 194129131 194131063 1932 False 2723.0 2723 91.850 606 2598 1 chr7D.!!$F4 1992
7 TraesCS7B01G130900 chr7D 132763136 132764683 1547 True 1871.0 1871 88.418 732 2326 1 chr7D.!!$R4 1594
8 TraesCS7B01G130900 chr7D 132829457 132830976 1519 True 1790.0 1790 88.008 774 2326 1 chr7D.!!$R5 1552
9 TraesCS7B01G130900 chr7D 132135502 132137076 1574 False 1679.0 1679 86.125 722 2326 1 chr7D.!!$F1 1604
10 TraesCS7B01G130900 chr7D 132156996 132158299 1303 False 1511.0 1511 87.665 736 2075 1 chr7D.!!$F2 1339
11 TraesCS7B01G130900 chr7D 132741220 132742578 1358 False 1472.0 1472 86.209 974 2402 1 chr7D.!!$F3 1428
12 TraesCS7B01G130900 chr7D 132748001 132749638 1637 False 856.5 1511 84.386 838 2608 2 chr7D.!!$F5 1770
13 TraesCS7B01G130900 chr7A 131186179 131187465 1286 True 1520.0 1520 88.263 963 2233 1 chr7A.!!$R3 1270
14 TraesCS7B01G130900 chr7A 131108093 131109277 1184 True 1393.0 1393 87.889 1028 2239 1 chr7A.!!$R1 1211
15 TraesCS7B01G130900 chr7A 203694829 203698538 3709 False 1352.5 1755 91.679 606 2590 2 chr7A.!!$F4 1984
16 TraesCS7B01G130900 chr7A 210252628 210253672 1044 False 1282.0 1282 88.951 1276 2326 1 chr7A.!!$F3 1050

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.100325 CAGAAACGTTTGGCAGCACA 59.90 50.0 20.1 0.0 0.0 4.57 F
396 397 0.179936 GATGGAGTTGGGAGCTGGAG 59.82 60.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 3271 1.00358 AGTTGCAACGTCCTCCATCAT 59.996 47.619 23.21 0.00 0.00 2.45 R
2253 4213 1.31569 TGACGTCAAACTCGAGGAGT 58.684 50.000 17.62 6.88 45.64 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.295423 TGTTCGGCAACCCTCTAGC 59.705 57.895 0.00 0.00 0.00 3.42
19 20 1.449778 GTTCGGCAACCCTCTAGCC 60.450 63.158 0.00 0.00 44.89 3.93
20 21 2.666098 TTCGGCAACCCTCTAGCCC 61.666 63.158 0.00 0.00 45.56 5.19
21 22 4.176752 CGGCAACCCTCTAGCCCC 62.177 72.222 0.00 0.00 45.56 5.80
22 23 3.810188 GGCAACCCTCTAGCCCCC 61.810 72.222 0.00 0.00 42.58 5.40
23 24 2.692741 GCAACCCTCTAGCCCCCT 60.693 66.667 0.00 0.00 0.00 4.79
24 25 2.747443 GCAACCCTCTAGCCCCCTC 61.747 68.421 0.00 0.00 0.00 4.30
25 26 1.306997 CAACCCTCTAGCCCCCTCA 60.307 63.158 0.00 0.00 0.00 3.86
26 27 1.003573 AACCCTCTAGCCCCCTCAG 59.996 63.158 0.00 0.00 0.00 3.35
27 28 1.528341 AACCCTCTAGCCCCCTCAGA 61.528 60.000 0.00 0.00 0.00 3.27
28 29 1.307976 ACCCTCTAGCCCCCTCAGAT 61.308 60.000 0.00 0.00 0.00 2.90
29 30 0.544120 CCCTCTAGCCCCCTCAGATC 60.544 65.000 0.00 0.00 0.00 2.75
30 31 0.544120 CCTCTAGCCCCCTCAGATCC 60.544 65.000 0.00 0.00 0.00 3.36
31 32 0.486879 CTCTAGCCCCCTCAGATCCT 59.513 60.000 0.00 0.00 0.00 3.24
32 33 0.485099 TCTAGCCCCCTCAGATCCTC 59.515 60.000 0.00 0.00 0.00 3.71
33 34 0.189574 CTAGCCCCCTCAGATCCTCA 59.810 60.000 0.00 0.00 0.00 3.86
34 35 0.642156 TAGCCCCCTCAGATCCTCAA 59.358 55.000 0.00 0.00 0.00 3.02
35 36 0.985490 AGCCCCCTCAGATCCTCAAC 60.985 60.000 0.00 0.00 0.00 3.18
36 37 0.985490 GCCCCCTCAGATCCTCAACT 60.985 60.000 0.00 0.00 0.00 3.16
37 38 1.127343 CCCCCTCAGATCCTCAACTC 58.873 60.000 0.00 0.00 0.00 3.01
38 39 1.127343 CCCCTCAGATCCTCAACTCC 58.873 60.000 0.00 0.00 0.00 3.85
39 40 1.343884 CCCCTCAGATCCTCAACTCCT 60.344 57.143 0.00 0.00 0.00 3.69
40 41 2.038659 CCCTCAGATCCTCAACTCCTC 58.961 57.143 0.00 0.00 0.00 3.71
41 42 2.625352 CCCTCAGATCCTCAACTCCTCA 60.625 54.545 0.00 0.00 0.00 3.86
42 43 2.694628 CCTCAGATCCTCAACTCCTCAG 59.305 54.545 0.00 0.00 0.00 3.35
43 44 2.101249 CTCAGATCCTCAACTCCTCAGC 59.899 54.545 0.00 0.00 0.00 4.26
44 45 2.109774 CAGATCCTCAACTCCTCAGCT 58.890 52.381 0.00 0.00 0.00 4.24
45 46 2.101249 CAGATCCTCAACTCCTCAGCTC 59.899 54.545 0.00 0.00 0.00 4.09
46 47 2.106566 GATCCTCAACTCCTCAGCTCA 58.893 52.381 0.00 0.00 0.00 4.26
47 48 2.015456 TCCTCAACTCCTCAGCTCAA 57.985 50.000 0.00 0.00 0.00 3.02
48 49 1.620819 TCCTCAACTCCTCAGCTCAAC 59.379 52.381 0.00 0.00 0.00 3.18
49 50 1.622811 CCTCAACTCCTCAGCTCAACT 59.377 52.381 0.00 0.00 0.00 3.16
50 51 2.353605 CCTCAACTCCTCAGCTCAACTC 60.354 54.545 0.00 0.00 0.00 3.01
51 52 1.620819 TCAACTCCTCAGCTCAACTCC 59.379 52.381 0.00 0.00 0.00 3.85
52 53 1.622811 CAACTCCTCAGCTCAACTCCT 59.377 52.381 0.00 0.00 0.00 3.69
53 54 1.555967 ACTCCTCAGCTCAACTCCTC 58.444 55.000 0.00 0.00 0.00 3.71
54 55 0.823460 CTCCTCAGCTCAACTCCTCC 59.177 60.000 0.00 0.00 0.00 4.30
55 56 0.967887 TCCTCAGCTCAACTCCTCCG 60.968 60.000 0.00 0.00 0.00 4.63
56 57 1.153667 CTCAGCTCAACTCCTCCGC 60.154 63.158 0.00 0.00 0.00 5.54
57 58 2.125350 CAGCTCAACTCCTCCGCC 60.125 66.667 0.00 0.00 0.00 6.13
58 59 3.394836 AGCTCAACTCCTCCGCCC 61.395 66.667 0.00 0.00 0.00 6.13
59 60 3.706373 GCTCAACTCCTCCGCCCA 61.706 66.667 0.00 0.00 0.00 5.36
60 61 3.068881 CTCAACTCCTCCGCCCAA 58.931 61.111 0.00 0.00 0.00 4.12
61 62 1.376037 CTCAACTCCTCCGCCCAAC 60.376 63.158 0.00 0.00 0.00 3.77
62 63 1.831652 CTCAACTCCTCCGCCCAACT 61.832 60.000 0.00 0.00 0.00 3.16
63 64 1.376037 CAACTCCTCCGCCCAACTC 60.376 63.158 0.00 0.00 0.00 3.01
64 65 2.593956 AACTCCTCCGCCCAACTCC 61.594 63.158 0.00 0.00 0.00 3.85
65 66 2.685380 CTCCTCCGCCCAACTCCT 60.685 66.667 0.00 0.00 0.00 3.69
66 67 2.683933 TCCTCCGCCCAACTCCTC 60.684 66.667 0.00 0.00 0.00 3.71
67 68 4.148825 CCTCCGCCCAACTCCTCG 62.149 72.222 0.00 0.00 0.00 4.63
68 69 3.382832 CTCCGCCCAACTCCTCGT 61.383 66.667 0.00 0.00 0.00 4.18
69 70 2.920912 TCCGCCCAACTCCTCGTT 60.921 61.111 0.00 0.00 35.88 3.85
93 94 4.632538 AAAAACCCAGAGTTCAGAAACG 57.367 40.909 0.00 0.00 37.88 3.60
94 95 3.277142 AAACCCAGAGTTCAGAAACGT 57.723 42.857 0.00 0.00 37.88 3.99
95 96 3.277142 AACCCAGAGTTCAGAAACGTT 57.723 42.857 0.00 0.00 40.48 3.99
96 97 3.277142 ACCCAGAGTTCAGAAACGTTT 57.723 42.857 14.57 14.57 40.48 3.60
97 98 2.943033 ACCCAGAGTTCAGAAACGTTTG 59.057 45.455 20.10 5.88 40.48 2.93
98 99 2.290641 CCCAGAGTTCAGAAACGTTTGG 59.709 50.000 20.10 10.52 40.48 3.28
99 100 2.287009 CCAGAGTTCAGAAACGTTTGGC 60.287 50.000 20.10 4.81 40.48 4.52
100 101 2.354510 CAGAGTTCAGAAACGTTTGGCA 59.645 45.455 20.10 0.00 40.48 4.92
101 102 2.614057 AGAGTTCAGAAACGTTTGGCAG 59.386 45.455 20.10 5.32 40.48 4.85
102 103 1.065551 AGTTCAGAAACGTTTGGCAGC 59.934 47.619 20.10 3.18 40.48 5.25
103 104 1.098869 TTCAGAAACGTTTGGCAGCA 58.901 45.000 20.10 0.00 0.00 4.41
104 105 0.380378 TCAGAAACGTTTGGCAGCAC 59.620 50.000 20.10 1.58 0.00 4.40
105 106 0.100325 CAGAAACGTTTGGCAGCACA 59.900 50.000 20.10 0.00 0.00 4.57
106 107 0.381801 AGAAACGTTTGGCAGCACAG 59.618 50.000 20.10 0.00 0.00 3.66
107 108 1.208642 GAAACGTTTGGCAGCACAGC 61.209 55.000 20.10 0.00 0.00 4.40
108 109 1.666209 AAACGTTTGGCAGCACAGCT 61.666 50.000 13.81 0.00 40.77 4.24
109 110 1.666209 AACGTTTGGCAGCACAGCTT 61.666 50.000 0.00 0.00 36.40 3.74
110 111 1.370900 CGTTTGGCAGCACAGCTTC 60.371 57.895 0.00 0.00 36.40 3.86
111 112 1.370900 GTTTGGCAGCACAGCTTCG 60.371 57.895 0.00 0.00 36.40 3.79
112 113 3.198236 TTTGGCAGCACAGCTTCGC 62.198 57.895 0.00 0.00 36.40 4.70
115 116 3.494336 GCAGCACAGCTTCGCGAT 61.494 61.111 10.88 0.00 36.40 4.58
116 117 2.699809 CAGCACAGCTTCGCGATC 59.300 61.111 10.88 5.03 36.40 3.69
117 118 2.882777 AGCACAGCTTCGCGATCG 60.883 61.111 10.88 11.69 33.89 3.69
118 119 3.918220 GCACAGCTTCGCGATCGG 61.918 66.667 18.30 8.58 36.13 4.18
119 120 3.257561 CACAGCTTCGCGATCGGG 61.258 66.667 24.78 24.78 36.13 5.14
120 121 3.449227 ACAGCTTCGCGATCGGGA 61.449 61.111 28.56 28.56 36.13 5.14
121 122 2.656651 CAGCTTCGCGATCGGGAG 60.657 66.667 29.93 24.20 38.30 4.30
122 123 4.577246 AGCTTCGCGATCGGGAGC 62.577 66.667 30.56 30.56 41.84 4.70
123 124 4.873129 GCTTCGCGATCGGGAGCA 62.873 66.667 31.62 21.66 41.47 4.26
124 125 2.956964 CTTCGCGATCGGGAGCAC 60.957 66.667 29.93 6.53 38.30 4.40
125 126 3.417275 CTTCGCGATCGGGAGCACT 62.417 63.158 29.93 0.00 38.30 4.40
126 127 3.699955 TTCGCGATCGGGAGCACTG 62.700 63.158 29.93 4.74 38.30 3.66
145 146 4.790962 CGTGGGCTGGCAGCTGAT 62.791 66.667 35.73 0.00 41.99 2.90
146 147 2.362120 GTGGGCTGGCAGCTGATT 60.362 61.111 35.73 0.00 41.99 2.57
147 148 2.044650 TGGGCTGGCAGCTGATTC 60.045 61.111 35.73 20.26 41.99 2.52
148 149 3.207669 GGGCTGGCAGCTGATTCG 61.208 66.667 35.73 3.00 41.99 3.34
149 150 3.207669 GGCTGGCAGCTGATTCGG 61.208 66.667 35.73 11.93 41.99 4.30
150 151 3.885521 GCTGGCAGCTGATTCGGC 61.886 66.667 31.37 17.84 38.45 5.54
152 153 1.748122 CTGGCAGCTGATTCGGCTT 60.748 57.895 20.43 0.65 44.48 4.35
153 154 1.303561 TGGCAGCTGATTCGGCTTT 60.304 52.632 20.43 0.00 44.48 3.51
154 155 1.138247 GGCAGCTGATTCGGCTTTG 59.862 57.895 20.43 9.54 44.48 2.77
155 156 1.308069 GGCAGCTGATTCGGCTTTGA 61.308 55.000 20.43 0.00 44.48 2.69
156 157 0.737219 GCAGCTGATTCGGCTTTGAT 59.263 50.000 20.43 0.00 44.48 2.57
157 158 1.268437 GCAGCTGATTCGGCTTTGATC 60.268 52.381 20.43 1.72 44.48 2.92
158 159 2.286872 CAGCTGATTCGGCTTTGATCT 58.713 47.619 17.41 0.00 44.48 2.75
159 160 2.031807 CAGCTGATTCGGCTTTGATCTG 59.968 50.000 17.41 1.94 44.48 2.90
160 161 1.332997 GCTGATTCGGCTTTGATCTGG 59.667 52.381 10.31 0.00 32.24 3.86
161 162 1.332997 CTGATTCGGCTTTGATCTGGC 59.667 52.381 0.00 0.00 0.00 4.85
162 163 0.665298 GATTCGGCTTTGATCTGGCC 59.335 55.000 0.00 0.00 42.18 5.36
163 164 0.753111 ATTCGGCTTTGATCTGGCCC 60.753 55.000 0.00 2.02 42.58 5.80
164 165 2.045045 CGGCTTTGATCTGGCCCA 60.045 61.111 0.00 0.00 42.58 5.36
165 166 2.117156 CGGCTTTGATCTGGCCCAG 61.117 63.158 3.69 3.69 42.58 4.45
166 167 2.421399 GGCTTTGATCTGGCCCAGC 61.421 63.158 5.66 0.00 39.96 4.85
167 168 1.379576 GCTTTGATCTGGCCCAGCT 60.380 57.895 5.66 0.00 0.00 4.24
168 169 1.382692 GCTTTGATCTGGCCCAGCTC 61.383 60.000 5.66 6.78 0.00 4.09
169 170 1.078214 TTTGATCTGGCCCAGCTCG 60.078 57.895 5.66 0.00 30.28 5.03
170 171 1.552799 TTTGATCTGGCCCAGCTCGA 61.553 55.000 5.66 2.62 30.28 4.04
171 172 1.964608 TTGATCTGGCCCAGCTCGAG 61.965 60.000 5.66 8.45 30.28 4.04
172 173 2.364842 ATCTGGCCCAGCTCGAGT 60.365 61.111 15.13 0.00 0.00 4.18
173 174 2.641439 GATCTGGCCCAGCTCGAGTG 62.641 65.000 15.13 10.78 0.00 3.51
174 175 3.385384 CTGGCCCAGCTCGAGTGA 61.385 66.667 15.13 0.00 0.00 3.41
175 176 2.685017 TGGCCCAGCTCGAGTGAT 60.685 61.111 15.13 0.00 0.00 3.06
176 177 1.381191 TGGCCCAGCTCGAGTGATA 60.381 57.895 15.13 0.00 0.00 2.15
177 178 0.975556 TGGCCCAGCTCGAGTGATAA 60.976 55.000 15.13 0.00 0.00 1.75
178 179 0.249657 GGCCCAGCTCGAGTGATAAG 60.250 60.000 15.13 0.00 0.00 1.73
179 180 0.878086 GCCCAGCTCGAGTGATAAGC 60.878 60.000 15.13 6.43 36.27 3.09
180 181 0.749649 CCCAGCTCGAGTGATAAGCT 59.250 55.000 15.13 0.04 46.98 3.74
182 183 3.657956 AGCTCGAGTGATAAGCTGC 57.342 52.632 15.13 0.00 44.41 5.25
183 184 0.820226 AGCTCGAGTGATAAGCTGCA 59.180 50.000 15.13 0.00 44.41 4.41
184 185 1.202394 AGCTCGAGTGATAAGCTGCAG 60.202 52.381 15.13 10.11 44.41 4.41
185 186 1.207390 CTCGAGTGATAAGCTGCAGC 58.793 55.000 31.53 31.53 42.49 5.25
195 196 3.488090 GCTGCAGCGAACCGGTAC 61.488 66.667 25.23 0.00 35.27 3.34
210 211 0.727398 GGTACGCTTGATCACTTGGC 59.273 55.000 0.00 0.00 0.00 4.52
212 213 2.787249 CGCTTGATCACTTGGCGG 59.213 61.111 17.87 5.64 41.77 6.13
213 214 2.034879 CGCTTGATCACTTGGCGGT 61.035 57.895 17.87 0.00 41.77 5.68
214 215 1.503542 GCTTGATCACTTGGCGGTG 59.496 57.895 0.00 4.38 38.44 4.94
215 216 1.926511 GCTTGATCACTTGGCGGTGG 61.927 60.000 0.00 0.00 37.75 4.61
216 217 1.926511 CTTGATCACTTGGCGGTGGC 61.927 60.000 0.00 4.63 37.75 5.01
217 218 2.359850 GATCACTTGGCGGTGGCA 60.360 61.111 9.83 0.00 42.47 4.92
218 219 1.750399 GATCACTTGGCGGTGGCAT 60.750 57.895 9.83 0.00 42.47 4.40
219 220 1.996786 GATCACTTGGCGGTGGCATG 61.997 60.000 9.83 4.97 42.47 4.06
220 221 4.424566 CACTTGGCGGTGGCATGC 62.425 66.667 9.90 9.90 42.47 4.06
221 222 4.972733 ACTTGGCGGTGGCATGCA 62.973 61.111 21.36 2.54 42.47 3.96
222 223 4.124351 CTTGGCGGTGGCATGCAG 62.124 66.667 21.36 8.62 42.47 4.41
227 228 2.436469 CGGTGGCATGCAGCTGTA 60.436 61.111 21.36 12.13 44.79 2.74
228 229 2.039974 CGGTGGCATGCAGCTGTAA 61.040 57.895 21.36 4.48 44.79 2.41
229 230 1.378882 CGGTGGCATGCAGCTGTAAT 61.379 55.000 21.36 6.90 44.79 1.89
230 231 0.819582 GGTGGCATGCAGCTGTAATT 59.180 50.000 21.36 0.00 44.79 1.40
231 232 1.202336 GGTGGCATGCAGCTGTAATTC 60.202 52.381 21.36 4.19 44.79 2.17
232 233 1.105457 TGGCATGCAGCTGTAATTCC 58.895 50.000 21.36 13.49 44.79 3.01
233 234 1.105457 GGCATGCAGCTGTAATTCCA 58.895 50.000 21.36 3.54 44.79 3.53
234 235 1.066605 GGCATGCAGCTGTAATTCCAG 59.933 52.381 21.36 0.00 44.79 3.86
235 236 1.747355 GCATGCAGCTGTAATTCCAGT 59.253 47.619 16.64 0.00 41.15 4.00
236 237 2.223433 GCATGCAGCTGTAATTCCAGTC 60.223 50.000 16.64 0.00 41.15 3.51
237 238 2.857186 TGCAGCTGTAATTCCAGTCA 57.143 45.000 16.64 0.00 34.84 3.41
238 239 3.138884 TGCAGCTGTAATTCCAGTCAA 57.861 42.857 16.64 0.00 34.84 3.18
239 240 2.813754 TGCAGCTGTAATTCCAGTCAAC 59.186 45.455 16.64 0.00 34.84 3.18
240 241 3.077359 GCAGCTGTAATTCCAGTCAACT 58.923 45.455 16.64 0.00 34.84 3.16
241 242 3.126000 GCAGCTGTAATTCCAGTCAACTC 59.874 47.826 16.64 0.00 34.84 3.01
242 243 4.573900 CAGCTGTAATTCCAGTCAACTCT 58.426 43.478 5.25 0.00 34.84 3.24
243 244 4.629200 CAGCTGTAATTCCAGTCAACTCTC 59.371 45.833 5.25 0.00 34.84 3.20
244 245 3.614616 GCTGTAATTCCAGTCAACTCTCG 59.385 47.826 0.00 0.00 34.84 4.04
245 246 3.585862 TGTAATTCCAGTCAACTCTCGC 58.414 45.455 0.00 0.00 0.00 5.03
246 247 3.258372 TGTAATTCCAGTCAACTCTCGCT 59.742 43.478 0.00 0.00 0.00 4.93
247 248 2.663826 ATTCCAGTCAACTCTCGCTC 57.336 50.000 0.00 0.00 0.00 5.03
248 249 0.603569 TTCCAGTCAACTCTCGCTCC 59.396 55.000 0.00 0.00 0.00 4.70
249 250 0.251386 TCCAGTCAACTCTCGCTCCT 60.251 55.000 0.00 0.00 0.00 3.69
250 251 0.605589 CCAGTCAACTCTCGCTCCTT 59.394 55.000 0.00 0.00 0.00 3.36
251 252 1.001406 CCAGTCAACTCTCGCTCCTTT 59.999 52.381 0.00 0.00 0.00 3.11
252 253 2.064762 CAGTCAACTCTCGCTCCTTTG 58.935 52.381 0.00 0.00 0.00 2.77
253 254 1.964223 AGTCAACTCTCGCTCCTTTGA 59.036 47.619 0.00 0.00 0.00 2.69
254 255 2.564947 AGTCAACTCTCGCTCCTTTGAT 59.435 45.455 0.00 0.00 0.00 2.57
255 256 3.007398 AGTCAACTCTCGCTCCTTTGATT 59.993 43.478 0.00 0.00 0.00 2.57
256 257 3.748568 GTCAACTCTCGCTCCTTTGATTT 59.251 43.478 0.00 0.00 0.00 2.17
257 258 4.214332 GTCAACTCTCGCTCCTTTGATTTT 59.786 41.667 0.00 0.00 0.00 1.82
258 259 4.821805 TCAACTCTCGCTCCTTTGATTTTT 59.178 37.500 0.00 0.00 0.00 1.94
259 260 4.756084 ACTCTCGCTCCTTTGATTTTTG 57.244 40.909 0.00 0.00 0.00 2.44
260 261 4.389374 ACTCTCGCTCCTTTGATTTTTGA 58.611 39.130 0.00 0.00 0.00 2.69
261 262 4.453819 ACTCTCGCTCCTTTGATTTTTGAG 59.546 41.667 0.00 0.00 0.00 3.02
262 263 4.641396 TCTCGCTCCTTTGATTTTTGAGA 58.359 39.130 0.00 0.00 0.00 3.27
263 264 4.692625 TCTCGCTCCTTTGATTTTTGAGAG 59.307 41.667 0.00 0.00 0.00 3.20
264 265 3.189287 TCGCTCCTTTGATTTTTGAGAGC 59.811 43.478 0.00 0.00 41.37 4.09
265 266 3.058016 CGCTCCTTTGATTTTTGAGAGCA 60.058 43.478 9.48 0.00 44.21 4.26
266 267 4.483311 GCTCCTTTGATTTTTGAGAGCAG 58.517 43.478 4.33 0.00 43.62 4.24
267 268 4.483311 CTCCTTTGATTTTTGAGAGCAGC 58.517 43.478 0.00 0.00 0.00 5.25
268 269 3.890756 TCCTTTGATTTTTGAGAGCAGCA 59.109 39.130 0.00 0.00 0.00 4.41
269 270 4.022589 TCCTTTGATTTTTGAGAGCAGCAG 60.023 41.667 0.00 0.00 0.00 4.24
270 271 4.022589 CCTTTGATTTTTGAGAGCAGCAGA 60.023 41.667 0.00 0.00 0.00 4.26
271 272 5.336531 CCTTTGATTTTTGAGAGCAGCAGAT 60.337 40.000 0.00 0.00 0.00 2.90
272 273 4.696899 TGATTTTTGAGAGCAGCAGATG 57.303 40.909 0.00 0.00 0.00 2.90
273 274 4.077108 TGATTTTTGAGAGCAGCAGATGT 58.923 39.130 0.00 0.00 0.00 3.06
274 275 4.155462 TGATTTTTGAGAGCAGCAGATGTC 59.845 41.667 0.00 0.00 0.00 3.06
275 276 3.413846 TTTTGAGAGCAGCAGATGTCT 57.586 42.857 0.00 0.00 0.00 3.41
276 277 4.541973 TTTTGAGAGCAGCAGATGTCTA 57.458 40.909 0.00 0.00 0.00 2.59
277 278 3.797451 TTGAGAGCAGCAGATGTCTAG 57.203 47.619 0.00 0.00 0.00 2.43
278 279 1.408340 TGAGAGCAGCAGATGTCTAGC 59.592 52.381 0.00 0.00 0.00 3.42
279 280 1.682854 GAGAGCAGCAGATGTCTAGCT 59.317 52.381 0.00 0.00 39.63 3.32
280 281 1.682854 AGAGCAGCAGATGTCTAGCTC 59.317 52.381 16.83 16.83 41.13 4.09
281 282 0.752054 AGCAGCAGATGTCTAGCTCC 59.248 55.000 0.00 0.00 36.26 4.70
282 283 0.752054 GCAGCAGATGTCTAGCTCCT 59.248 55.000 0.00 0.00 36.26 3.69
283 284 1.269726 GCAGCAGATGTCTAGCTCCTC 60.270 57.143 0.00 0.00 36.26 3.71
284 285 2.030371 CAGCAGATGTCTAGCTCCTCA 58.970 52.381 0.00 0.00 36.26 3.86
285 286 2.034939 CAGCAGATGTCTAGCTCCTCAG 59.965 54.545 0.00 0.00 36.26 3.35
294 295 4.244326 GCTCCTCAGCTCCTCGTA 57.756 61.111 0.00 0.00 43.09 3.43
295 296 2.494677 GCTCCTCAGCTCCTCGTAA 58.505 57.895 0.00 0.00 43.09 3.18
296 297 0.818296 GCTCCTCAGCTCCTCGTAAA 59.182 55.000 0.00 0.00 43.09 2.01
297 298 1.204941 GCTCCTCAGCTCCTCGTAAAA 59.795 52.381 0.00 0.00 43.09 1.52
298 299 2.159028 GCTCCTCAGCTCCTCGTAAAAT 60.159 50.000 0.00 0.00 43.09 1.82
299 300 3.068307 GCTCCTCAGCTCCTCGTAAAATA 59.932 47.826 0.00 0.00 43.09 1.40
300 301 4.612943 CTCCTCAGCTCCTCGTAAAATAC 58.387 47.826 0.00 0.00 0.00 1.89
301 302 4.021229 TCCTCAGCTCCTCGTAAAATACA 58.979 43.478 0.00 0.00 0.00 2.29
302 303 4.098044 TCCTCAGCTCCTCGTAAAATACAG 59.902 45.833 0.00 0.00 0.00 2.74
303 304 4.142138 CCTCAGCTCCTCGTAAAATACAGT 60.142 45.833 0.00 0.00 0.00 3.55
304 305 5.067413 CCTCAGCTCCTCGTAAAATACAGTA 59.933 44.000 0.00 0.00 0.00 2.74
305 306 5.888105 TCAGCTCCTCGTAAAATACAGTAC 58.112 41.667 0.00 0.00 0.00 2.73
306 307 4.733887 CAGCTCCTCGTAAAATACAGTACG 59.266 45.833 0.00 0.00 43.45 3.67
307 308 3.485013 GCTCCTCGTAAAATACAGTACGC 59.515 47.826 0.00 0.00 42.17 4.42
308 309 4.732938 GCTCCTCGTAAAATACAGTACGCT 60.733 45.833 0.00 0.00 42.17 5.07
309 310 5.314923 TCCTCGTAAAATACAGTACGCTT 57.685 39.130 0.00 0.00 42.17 4.68
310 311 5.335127 TCCTCGTAAAATACAGTACGCTTC 58.665 41.667 0.00 0.00 42.17 3.86
311 312 4.203764 CCTCGTAAAATACAGTACGCTTCG 59.796 45.833 0.00 0.00 42.17 3.79
312 313 3.543494 TCGTAAAATACAGTACGCTTCGC 59.457 43.478 0.00 0.00 42.17 4.70
313 314 3.545078 CGTAAAATACAGTACGCTTCGCT 59.455 43.478 0.00 0.00 36.96 4.93
314 315 4.316240 CGTAAAATACAGTACGCTTCGCTC 60.316 45.833 0.00 0.00 36.96 5.03
315 316 2.205307 AATACAGTACGCTTCGCTCC 57.795 50.000 0.00 0.00 0.00 4.70
316 317 0.384669 ATACAGTACGCTTCGCTCCC 59.615 55.000 0.00 0.00 0.00 4.30
317 318 0.961857 TACAGTACGCTTCGCTCCCA 60.962 55.000 0.00 0.00 0.00 4.37
318 319 1.517257 CAGTACGCTTCGCTCCCAG 60.517 63.158 0.00 0.00 0.00 4.45
319 320 2.886124 GTACGCTTCGCTCCCAGC 60.886 66.667 0.00 0.00 38.02 4.85
320 321 3.068691 TACGCTTCGCTCCCAGCT 61.069 61.111 0.00 0.00 39.60 4.24
321 322 3.064987 TACGCTTCGCTCCCAGCTC 62.065 63.158 0.00 0.00 39.60 4.09
322 323 4.140599 CGCTTCGCTCCCAGCTCT 62.141 66.667 0.00 0.00 39.60 4.09
323 324 2.267324 GCTTCGCTCCCAGCTCTT 59.733 61.111 0.00 0.00 39.60 2.85
324 325 1.376553 GCTTCGCTCCCAGCTCTTT 60.377 57.895 0.00 0.00 39.60 2.52
325 326 0.957888 GCTTCGCTCCCAGCTCTTTT 60.958 55.000 0.00 0.00 39.60 2.27
326 327 1.528129 CTTCGCTCCCAGCTCTTTTT 58.472 50.000 0.00 0.00 39.60 1.94
355 356 4.604114 GGGAGTTAACCCGTTCGG 57.396 61.111 0.88 4.08 40.49 4.30
356 357 1.742880 GGGAGTTAACCCGTTCGGC 60.743 63.158 5.66 0.00 40.49 5.54
357 358 1.004679 GGAGTTAACCCGTTCGGCA 60.005 57.895 5.66 0.00 33.26 5.69
358 359 1.293963 GGAGTTAACCCGTTCGGCAC 61.294 60.000 5.66 0.21 33.26 5.01
359 360 0.600782 GAGTTAACCCGTTCGGCACA 60.601 55.000 5.66 0.00 33.26 4.57
360 361 0.601841 AGTTAACCCGTTCGGCACAG 60.602 55.000 5.66 0.00 33.26 3.66
361 362 1.962306 TTAACCCGTTCGGCACAGC 60.962 57.895 5.66 0.00 33.26 4.40
362 363 2.386064 TTAACCCGTTCGGCACAGCT 62.386 55.000 5.66 0.00 33.26 4.24
363 364 2.775032 TAACCCGTTCGGCACAGCTC 62.775 60.000 5.66 0.00 33.26 4.09
365 366 4.680237 CCGTTCGGCACAGCTCCA 62.680 66.667 0.00 0.00 0.00 3.86
366 367 2.664851 CGTTCGGCACAGCTCCAA 60.665 61.111 0.00 0.00 0.00 3.53
367 368 2.250939 CGTTCGGCACAGCTCCAAA 61.251 57.895 0.00 0.00 0.00 3.28
368 369 1.576421 GTTCGGCACAGCTCCAAAG 59.424 57.895 0.00 0.00 0.00 2.77
382 383 2.205022 CCAAAGCTGGAGTTGATGGA 57.795 50.000 0.00 0.00 46.92 3.41
383 384 2.089980 CCAAAGCTGGAGTTGATGGAG 58.910 52.381 0.00 0.00 46.92 3.86
384 385 2.553904 CCAAAGCTGGAGTTGATGGAGT 60.554 50.000 0.00 0.00 46.92 3.85
385 386 3.152341 CAAAGCTGGAGTTGATGGAGTT 58.848 45.455 0.00 0.00 0.00 3.01
386 387 2.486472 AGCTGGAGTTGATGGAGTTG 57.514 50.000 0.00 0.00 0.00 3.16
387 388 1.004044 AGCTGGAGTTGATGGAGTTGG 59.996 52.381 0.00 0.00 0.00 3.77
388 389 1.952367 GCTGGAGTTGATGGAGTTGGG 60.952 57.143 0.00 0.00 0.00 4.12
389 390 1.630369 CTGGAGTTGATGGAGTTGGGA 59.370 52.381 0.00 0.00 0.00 4.37
390 391 1.630369 TGGAGTTGATGGAGTTGGGAG 59.370 52.381 0.00 0.00 0.00 4.30
391 392 1.680249 GGAGTTGATGGAGTTGGGAGC 60.680 57.143 0.00 0.00 0.00 4.70
392 393 1.280421 GAGTTGATGGAGTTGGGAGCT 59.720 52.381 0.00 0.00 0.00 4.09
393 394 1.004044 AGTTGATGGAGTTGGGAGCTG 59.996 52.381 0.00 0.00 0.00 4.24
394 395 0.329261 TTGATGGAGTTGGGAGCTGG 59.671 55.000 0.00 0.00 0.00 4.85
395 396 0.547471 TGATGGAGTTGGGAGCTGGA 60.547 55.000 0.00 0.00 0.00 3.86
396 397 0.179936 GATGGAGTTGGGAGCTGGAG 59.820 60.000 0.00 0.00 0.00 3.86
397 398 0.252881 ATGGAGTTGGGAGCTGGAGA 60.253 55.000 0.00 0.00 0.00 3.71
398 399 0.906756 TGGAGTTGGGAGCTGGAGAG 60.907 60.000 0.00 0.00 0.00 3.20
399 400 1.220477 GAGTTGGGAGCTGGAGAGC 59.780 63.158 0.00 0.00 46.64 4.09
407 408 3.567473 GCTGGAGAGCAACCGAAC 58.433 61.111 0.00 0.00 45.46 3.95
408 409 1.301716 GCTGGAGAGCAACCGAACA 60.302 57.895 0.00 0.00 45.46 3.18
409 410 1.294659 GCTGGAGAGCAACCGAACAG 61.295 60.000 0.00 0.00 45.46 3.16
411 412 2.035442 GGAGAGCAACCGAACAGGC 61.035 63.158 0.00 0.00 46.52 4.85
412 413 1.004440 GAGAGCAACCGAACAGGCT 60.004 57.895 0.00 0.00 46.52 4.58
413 414 3.567473 GAGCAACCGAACAGGCTC 58.433 61.111 0.00 0.00 46.52 4.70
414 415 1.004440 GAGCAACCGAACAGGCTCT 60.004 57.895 5.31 0.00 46.95 4.09
415 416 0.246635 GAGCAACCGAACAGGCTCTA 59.753 55.000 5.31 0.00 46.95 2.43
416 417 0.685097 AGCAACCGAACAGGCTCTAA 59.315 50.000 0.00 0.00 46.52 2.10
417 418 1.071699 AGCAACCGAACAGGCTCTAAA 59.928 47.619 0.00 0.00 46.52 1.85
418 419 1.197036 GCAACCGAACAGGCTCTAAAC 59.803 52.381 0.00 0.00 46.52 2.01
419 420 2.489971 CAACCGAACAGGCTCTAAACA 58.510 47.619 0.00 0.00 46.52 2.83
420 421 2.165319 ACCGAACAGGCTCTAAACAC 57.835 50.000 0.00 0.00 46.52 3.32
421 422 1.692519 ACCGAACAGGCTCTAAACACT 59.307 47.619 0.00 0.00 46.52 3.55
422 423 2.069273 CCGAACAGGCTCTAAACACTG 58.931 52.381 0.00 0.00 37.01 3.66
423 424 2.548067 CCGAACAGGCTCTAAACACTGT 60.548 50.000 0.00 0.00 45.34 3.55
428 429 5.483685 ACAGGCTCTAAACACTGTTATCA 57.516 39.130 0.00 0.00 41.03 2.15
429 430 6.054860 ACAGGCTCTAAACACTGTTATCAT 57.945 37.500 0.00 0.00 41.03 2.45
430 431 6.476378 ACAGGCTCTAAACACTGTTATCATT 58.524 36.000 0.00 0.00 41.03 2.57
431 432 6.595716 ACAGGCTCTAAACACTGTTATCATTC 59.404 38.462 0.00 0.00 41.03 2.67
432 433 5.812642 AGGCTCTAAACACTGTTATCATTCG 59.187 40.000 0.00 0.00 0.00 3.34
433 434 5.493735 GCTCTAAACACTGTTATCATTCGC 58.506 41.667 0.00 0.00 0.00 4.70
434 435 5.063438 GCTCTAAACACTGTTATCATTCGCA 59.937 40.000 0.00 0.00 0.00 5.10
435 436 6.402118 GCTCTAAACACTGTTATCATTCGCAA 60.402 38.462 0.00 0.00 0.00 4.85
436 437 7.428282 TCTAAACACTGTTATCATTCGCAAA 57.572 32.000 0.00 0.00 0.00 3.68
437 438 7.866729 TCTAAACACTGTTATCATTCGCAAAA 58.133 30.769 0.00 0.00 0.00 2.44
438 439 8.346300 TCTAAACACTGTTATCATTCGCAAAAA 58.654 29.630 0.00 0.00 0.00 1.94
467 468 9.716531 AACTAAACACTGTTATTACTTACTCCC 57.283 33.333 0.00 0.00 0.00 4.30
468 469 9.097946 ACTAAACACTGTTATTACTTACTCCCT 57.902 33.333 0.00 0.00 0.00 4.20
469 470 9.583765 CTAAACACTGTTATTACTTACTCCCTC 57.416 37.037 0.00 0.00 0.00 4.30
470 471 6.541934 ACACTGTTATTACTTACTCCCTCC 57.458 41.667 0.00 0.00 0.00 4.30
471 472 5.126707 ACACTGTTATTACTTACTCCCTCCG 59.873 44.000 0.00 0.00 0.00 4.63
472 473 5.126707 CACTGTTATTACTTACTCCCTCCGT 59.873 44.000 0.00 0.00 0.00 4.69
473 474 5.718607 ACTGTTATTACTTACTCCCTCCGTT 59.281 40.000 0.00 0.00 0.00 4.44
474 475 6.127507 ACTGTTATTACTTACTCCCTCCGTTC 60.128 42.308 0.00 0.00 0.00 3.95
475 476 5.127682 TGTTATTACTTACTCCCTCCGTTCC 59.872 44.000 0.00 0.00 0.00 3.62
476 477 2.905415 TACTTACTCCCTCCGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
477 478 2.019807 ACTTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
478 479 2.332117 ACTTACTCCCTCCGTTCCAAA 58.668 47.619 0.00 0.00 0.00 3.28
479 480 2.707257 ACTTACTCCCTCCGTTCCAAAA 59.293 45.455 0.00 0.00 0.00 2.44
480 481 3.329814 ACTTACTCCCTCCGTTCCAAAAT 59.670 43.478 0.00 0.00 0.00 1.82
481 482 4.533311 ACTTACTCCCTCCGTTCCAAAATA 59.467 41.667 0.00 0.00 0.00 1.40
482 483 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
483 484 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
484 485 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
485 486 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
486 487 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
487 488 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
488 489 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
489 490 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
490 491 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
491 492 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
492 493 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
493 494 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
494 495 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
495 496 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
496 497 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
497 498 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
498 499 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
499 500 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
500 501 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
506 507 8.184304 AGATGACTCAACTTTGTACTAACTCT 57.816 34.615 0.00 0.00 0.00 3.24
507 508 9.298250 AGATGACTCAACTTTGTACTAACTCTA 57.702 33.333 0.00 0.00 0.00 2.43
508 509 9.562583 GATGACTCAACTTTGTACTAACTCTAG 57.437 37.037 0.00 0.00 0.00 2.43
509 510 8.461249 TGACTCAACTTTGTACTAACTCTAGT 57.539 34.615 0.00 0.00 41.43 2.57
510 511 9.565090 TGACTCAACTTTGTACTAACTCTAGTA 57.435 33.333 0.00 0.00 39.23 1.82
537 538 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
538 539 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
539 540 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
540 541 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
541 542 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
542 543 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
543 544 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
544 545 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
545 546 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
546 547 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
547 548 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
562 563 6.155737 GGAGGGAGTACTTATTAGGTTGACAA 59.844 42.308 0.00 0.00 0.00 3.18
599 600 1.154150 GCGCATGTCTGTTGCTTCC 60.154 57.895 0.30 0.00 37.96 3.46
633 635 4.760204 ACCAAACGGTAGGAATTCTTCTTG 59.240 41.667 5.23 0.82 33.92 3.02
727 732 2.244695 TCCATGTCGCCCTAATCGTAT 58.755 47.619 0.00 0.00 0.00 3.06
728 733 3.423749 TCCATGTCGCCCTAATCGTATA 58.576 45.455 0.00 0.00 0.00 1.47
729 734 3.442625 TCCATGTCGCCCTAATCGTATAG 59.557 47.826 0.00 0.00 0.00 1.31
800 805 4.292178 CGAGAGCCCAGCCGATCC 62.292 72.222 0.00 0.00 0.00 3.36
924 934 5.097529 CCACAAGAATCCAAAATCATCACG 58.902 41.667 0.00 0.00 0.00 4.35
925 935 4.560035 CACAAGAATCCAAAATCATCACGC 59.440 41.667 0.00 0.00 0.00 5.34
927 937 4.627611 AGAATCCAAAATCATCACGCAG 57.372 40.909 0.00 0.00 0.00 5.18
928 938 4.264253 AGAATCCAAAATCATCACGCAGA 58.736 39.130 0.00 0.00 0.00 4.26
943 963 1.942657 CGCAGAAGAGAGAGAGAGAGG 59.057 57.143 0.00 0.00 0.00 3.69
944 964 2.301346 GCAGAAGAGAGAGAGAGAGGG 58.699 57.143 0.00 0.00 0.00 4.30
945 965 2.936202 CAGAAGAGAGAGAGAGAGGGG 58.064 57.143 0.00 0.00 0.00 4.79
946 966 1.852965 AGAAGAGAGAGAGAGAGGGGG 59.147 57.143 0.00 0.00 0.00 5.40
977 997 6.659242 GGAGAGAGAAAGAGAAAGAAGAGAGA 59.341 42.308 0.00 0.00 0.00 3.10
1383 3271 1.685765 ATGGCCCGTCTGCTGTCTA 60.686 57.895 0.00 0.00 0.00 2.59
1621 3524 3.766691 GCCGAGGTAGAACCGCCA 61.767 66.667 0.00 0.00 44.90 5.69
1858 3796 5.184864 TGTCTTTCTTCCTTGTTTTGCTTCA 59.815 36.000 0.00 0.00 0.00 3.02
1912 3851 0.878523 TGGTGAAGTTGGTCGCGAAG 60.879 55.000 12.06 0.00 0.00 3.79
1943 3890 7.573968 ATTTTCCTCTAGTTTGGCATATGAC 57.426 36.000 6.97 3.57 0.00 3.06
1952 3899 5.539582 GTTTGGCATATGACGAACTTACA 57.460 39.130 28.01 0.00 42.81 2.41
2086 4035 4.751060 CGTGCTGGACTAATTTAGTGGTA 58.249 43.478 13.69 1.67 39.59 3.25
2138 4087 0.323999 ATTTGGCCTGATGAGCTGCA 60.324 50.000 3.32 0.00 0.00 4.41
2172 4130 1.538075 GCTAGTCTCGCCTGTCTATCC 59.462 57.143 0.00 0.00 0.00 2.59
2253 4213 6.820656 GCCTACTCTCTGAGAAATTGATTGAA 59.179 38.462 8.95 0.00 33.32 2.69
2326 4286 3.801594 TGATTTTTGCTTGCTTTTCCGTC 59.198 39.130 0.00 0.00 0.00 4.79
2328 4288 3.451141 TTTTGCTTGCTTTTCCGTCAT 57.549 38.095 0.00 0.00 0.00 3.06
2329 4289 2.420628 TTGCTTGCTTTTCCGTCATG 57.579 45.000 0.00 0.00 0.00 3.07
2330 4290 0.597568 TGCTTGCTTTTCCGTCATGG 59.402 50.000 0.00 0.00 40.09 3.66
2342 4302 4.819105 TCCGTCATGGAGTCTGTTAATT 57.181 40.909 0.00 0.00 43.74 1.40
2343 4303 5.160607 TCCGTCATGGAGTCTGTTAATTT 57.839 39.130 0.00 0.00 43.74 1.82
2344 4304 5.556915 TCCGTCATGGAGTCTGTTAATTTT 58.443 37.500 0.00 0.00 43.74 1.82
2345 4305 6.001460 TCCGTCATGGAGTCTGTTAATTTTT 58.999 36.000 0.00 0.00 43.74 1.94
2346 4306 6.072728 TCCGTCATGGAGTCTGTTAATTTTTG 60.073 38.462 0.00 0.00 43.74 2.44
2347 4307 5.569059 CGTCATGGAGTCTGTTAATTTTTGC 59.431 40.000 0.00 0.00 0.00 3.68
2348 4308 6.568462 CGTCATGGAGTCTGTTAATTTTTGCT 60.568 38.462 0.00 0.00 0.00 3.91
2349 4309 7.147976 GTCATGGAGTCTGTTAATTTTTGCTT 58.852 34.615 0.00 0.00 0.00 3.91
2350 4310 7.115378 GTCATGGAGTCTGTTAATTTTTGCTTG 59.885 37.037 0.00 0.00 0.00 4.01
2351 4311 5.288804 TGGAGTCTGTTAATTTTTGCTTGC 58.711 37.500 0.00 0.00 0.00 4.01
2352 4312 5.068987 TGGAGTCTGTTAATTTTTGCTTGCT 59.931 36.000 0.00 0.00 0.00 3.91
2425 4386 4.159693 AGTTGTCACATGAGATAGGCGTTA 59.840 41.667 0.00 0.00 0.00 3.18
2430 4391 5.232414 GTCACATGAGATAGGCGTTAGTTTC 59.768 44.000 0.00 0.00 0.00 2.78
2436 4397 8.704234 CATGAGATAGGCGTTAGTTTCTTTATC 58.296 37.037 0.00 0.00 0.00 1.75
2438 4399 7.921214 TGAGATAGGCGTTAGTTTCTTTATCTG 59.079 37.037 0.00 0.00 29.45 2.90
2471 4432 9.398170 CGTTGATTTTCTCAAGTTTAATGTGAT 57.602 29.630 0.00 0.00 44.44 3.06
2528 4489 4.808895 GGTTCCCTGAATGTTTTGTGTTTC 59.191 41.667 0.00 0.00 0.00 2.78
2547 4508 6.201234 GTGTTTCTCCTCTGTGTTTACTTCTC 59.799 42.308 0.00 0.00 0.00 2.87
2610 4571 4.876701 GCGAACAGCCATATGGGA 57.123 55.556 23.30 0.00 40.01 4.37
2611 4572 2.621763 GCGAACAGCCATATGGGAG 58.378 57.895 23.30 6.29 40.01 4.30
2612 4573 0.179045 GCGAACAGCCATATGGGAGT 60.179 55.000 23.30 4.33 40.01 3.85
2613 4574 1.747206 GCGAACAGCCATATGGGAGTT 60.747 52.381 23.30 11.55 40.01 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.295423 GCTAGAGGGTTGCCGAACA 59.705 57.895 0.00 0.00 33.27 3.18
1 2 1.449778 GGCTAGAGGGTTGCCGAAC 60.450 63.158 0.00 0.00 37.11 3.95
2 3 2.666098 GGGCTAGAGGGTTGCCGAA 61.666 63.158 0.00 0.00 46.97 4.30
3 4 3.081409 GGGCTAGAGGGTTGCCGA 61.081 66.667 0.00 0.00 46.97 5.54
4 5 4.176752 GGGGCTAGAGGGTTGCCG 62.177 72.222 0.00 0.00 46.97 5.69
5 6 3.810188 GGGGGCTAGAGGGTTGCC 61.810 72.222 0.00 0.00 45.42 4.52
6 7 2.692741 AGGGGGCTAGAGGGTTGC 60.693 66.667 0.00 0.00 0.00 4.17
7 8 1.306997 TGAGGGGGCTAGAGGGTTG 60.307 63.158 0.00 0.00 0.00 3.77
8 9 1.003573 CTGAGGGGGCTAGAGGGTT 59.996 63.158 0.00 0.00 0.00 4.11
9 10 1.307976 ATCTGAGGGGGCTAGAGGGT 61.308 60.000 0.00 0.00 0.00 4.34
10 11 0.544120 GATCTGAGGGGGCTAGAGGG 60.544 65.000 0.00 0.00 0.00 4.30
11 12 0.544120 GGATCTGAGGGGGCTAGAGG 60.544 65.000 0.00 0.00 0.00 3.69
12 13 0.486879 AGGATCTGAGGGGGCTAGAG 59.513 60.000 0.00 0.00 0.00 2.43
13 14 0.485099 GAGGATCTGAGGGGGCTAGA 59.515 60.000 0.00 0.00 0.00 2.43
14 15 0.189574 TGAGGATCTGAGGGGGCTAG 59.810 60.000 0.00 0.00 34.92 3.42
15 16 0.642156 TTGAGGATCTGAGGGGGCTA 59.358 55.000 0.00 0.00 34.92 3.93
16 17 0.985490 GTTGAGGATCTGAGGGGGCT 60.985 60.000 0.00 0.00 34.92 5.19
17 18 0.985490 AGTTGAGGATCTGAGGGGGC 60.985 60.000 0.00 0.00 34.92 5.80
18 19 1.127343 GAGTTGAGGATCTGAGGGGG 58.873 60.000 0.00 0.00 34.92 5.40
19 20 1.127343 GGAGTTGAGGATCTGAGGGG 58.873 60.000 0.00 0.00 34.92 4.79
20 21 2.038659 GAGGAGTTGAGGATCTGAGGG 58.961 57.143 0.00 0.00 34.92 4.30
21 22 2.694628 CTGAGGAGTTGAGGATCTGAGG 59.305 54.545 0.00 0.00 34.92 3.86
22 23 2.101249 GCTGAGGAGTTGAGGATCTGAG 59.899 54.545 0.00 0.00 34.92 3.35
23 24 2.106566 GCTGAGGAGTTGAGGATCTGA 58.893 52.381 0.00 0.00 34.92 3.27
24 25 2.101249 GAGCTGAGGAGTTGAGGATCTG 59.899 54.545 0.00 0.00 34.92 2.90
25 26 2.292126 TGAGCTGAGGAGTTGAGGATCT 60.292 50.000 0.00 0.00 34.92 2.75
26 27 2.106566 TGAGCTGAGGAGTTGAGGATC 58.893 52.381 0.00 0.00 0.00 3.36
27 28 2.235898 GTTGAGCTGAGGAGTTGAGGAT 59.764 50.000 0.00 0.00 0.00 3.24
28 29 1.620819 GTTGAGCTGAGGAGTTGAGGA 59.379 52.381 0.00 0.00 0.00 3.71
29 30 1.622811 AGTTGAGCTGAGGAGTTGAGG 59.377 52.381 0.00 0.00 0.00 3.86
30 31 2.353605 GGAGTTGAGCTGAGGAGTTGAG 60.354 54.545 0.00 0.00 0.00 3.02
31 32 1.620819 GGAGTTGAGCTGAGGAGTTGA 59.379 52.381 0.00 0.00 0.00 3.18
32 33 1.622811 AGGAGTTGAGCTGAGGAGTTG 59.377 52.381 0.00 0.00 0.00 3.16
33 34 1.899142 GAGGAGTTGAGCTGAGGAGTT 59.101 52.381 0.00 0.00 0.00 3.01
34 35 1.555967 GAGGAGTTGAGCTGAGGAGT 58.444 55.000 0.00 0.00 0.00 3.85
35 36 0.823460 GGAGGAGTTGAGCTGAGGAG 59.177 60.000 0.00 0.00 0.00 3.69
36 37 0.967887 CGGAGGAGTTGAGCTGAGGA 60.968 60.000 0.00 0.00 0.00 3.71
37 38 1.515020 CGGAGGAGTTGAGCTGAGG 59.485 63.158 0.00 0.00 0.00 3.86
38 39 1.153667 GCGGAGGAGTTGAGCTGAG 60.154 63.158 0.00 0.00 0.00 3.35
39 40 2.650116 GGCGGAGGAGTTGAGCTGA 61.650 63.158 0.00 0.00 0.00 4.26
40 41 2.125350 GGCGGAGGAGTTGAGCTG 60.125 66.667 0.00 0.00 0.00 4.24
41 42 3.394836 GGGCGGAGGAGTTGAGCT 61.395 66.667 0.00 0.00 0.00 4.09
42 43 3.254024 TTGGGCGGAGGAGTTGAGC 62.254 63.158 0.00 0.00 0.00 4.26
43 44 1.376037 GTTGGGCGGAGGAGTTGAG 60.376 63.158 0.00 0.00 0.00 3.02
44 45 1.827399 GAGTTGGGCGGAGGAGTTGA 61.827 60.000 0.00 0.00 0.00 3.18
45 46 1.376037 GAGTTGGGCGGAGGAGTTG 60.376 63.158 0.00 0.00 0.00 3.16
46 47 2.593956 GGAGTTGGGCGGAGGAGTT 61.594 63.158 0.00 0.00 0.00 3.01
47 48 3.003763 GGAGTTGGGCGGAGGAGT 61.004 66.667 0.00 0.00 0.00 3.85
48 49 2.685380 AGGAGTTGGGCGGAGGAG 60.685 66.667 0.00 0.00 0.00 3.69
49 50 2.683933 GAGGAGTTGGGCGGAGGA 60.684 66.667 0.00 0.00 0.00 3.71
50 51 4.148825 CGAGGAGTTGGGCGGAGG 62.149 72.222 0.00 0.00 0.00 4.30
51 52 2.943978 AACGAGGAGTTGGGCGGAG 61.944 63.158 0.00 0.00 42.39 4.63
52 53 2.920912 AACGAGGAGTTGGGCGGA 60.921 61.111 0.00 0.00 42.39 5.54
72 73 4.014406 ACGTTTCTGAACTCTGGGTTTTT 58.986 39.130 0.00 0.00 38.41 1.94
73 74 3.617284 ACGTTTCTGAACTCTGGGTTTT 58.383 40.909 0.00 0.00 38.41 2.43
74 75 3.277142 ACGTTTCTGAACTCTGGGTTT 57.723 42.857 0.00 0.00 38.41 3.27
75 76 3.277142 AACGTTTCTGAACTCTGGGTT 57.723 42.857 0.00 0.00 41.40 4.11
76 77 2.943033 CAAACGTTTCTGAACTCTGGGT 59.057 45.455 11.37 0.00 33.51 4.51
77 78 2.290641 CCAAACGTTTCTGAACTCTGGG 59.709 50.000 11.37 1.30 33.51 4.45
78 79 2.287009 GCCAAACGTTTCTGAACTCTGG 60.287 50.000 11.37 8.03 33.51 3.86
79 80 2.354510 TGCCAAACGTTTCTGAACTCTG 59.645 45.455 11.37 0.00 33.51 3.35
80 81 2.614057 CTGCCAAACGTTTCTGAACTCT 59.386 45.455 11.37 0.00 33.51 3.24
81 82 2.854805 GCTGCCAAACGTTTCTGAACTC 60.855 50.000 11.37 0.00 33.51 3.01
82 83 1.065551 GCTGCCAAACGTTTCTGAACT 59.934 47.619 11.37 0.00 33.51 3.01
83 84 1.202245 TGCTGCCAAACGTTTCTGAAC 60.202 47.619 11.37 1.83 0.00 3.18
84 85 1.098869 TGCTGCCAAACGTTTCTGAA 58.901 45.000 11.37 0.00 0.00 3.02
85 86 0.380378 GTGCTGCCAAACGTTTCTGA 59.620 50.000 11.37 0.00 0.00 3.27
86 87 0.100325 TGTGCTGCCAAACGTTTCTG 59.900 50.000 11.37 6.64 0.00 3.02
87 88 0.381801 CTGTGCTGCCAAACGTTTCT 59.618 50.000 11.37 0.00 0.00 2.52
88 89 1.208642 GCTGTGCTGCCAAACGTTTC 61.209 55.000 11.37 1.28 0.00 2.78
89 90 1.226945 GCTGTGCTGCCAAACGTTT 60.227 52.632 7.96 7.96 0.00 3.60
90 91 1.666209 AAGCTGTGCTGCCAAACGTT 61.666 50.000 0.00 0.00 39.62 3.99
91 92 2.063541 GAAGCTGTGCTGCCAAACGT 62.064 55.000 0.00 0.00 39.62 3.99
92 93 1.370900 GAAGCTGTGCTGCCAAACG 60.371 57.895 0.00 0.00 39.62 3.60
93 94 1.370900 CGAAGCTGTGCTGCCAAAC 60.371 57.895 0.00 0.00 39.62 2.93
94 95 3.033184 CGAAGCTGTGCTGCCAAA 58.967 55.556 0.00 0.00 39.62 3.28
107 108 2.956964 GTGCTCCCGATCGCGAAG 60.957 66.667 15.24 10.75 40.82 3.79
108 109 3.449227 AGTGCTCCCGATCGCGAA 61.449 61.111 15.24 0.00 40.82 4.70
109 110 4.193334 CAGTGCTCCCGATCGCGA 62.193 66.667 13.09 13.09 40.82 5.87
113 114 4.148825 ACGCCAGTGCTCCCGATC 62.149 66.667 0.00 0.00 34.43 3.69
114 115 4.457496 CACGCCAGTGCTCCCGAT 62.457 66.667 0.00 0.00 41.94 4.18
128 129 4.790962 ATCAGCTGCCAGCCCACG 62.791 66.667 14.25 0.00 43.77 4.94
129 130 2.362120 AATCAGCTGCCAGCCCAC 60.362 61.111 14.25 0.00 43.77 4.61
130 131 2.044650 GAATCAGCTGCCAGCCCA 60.045 61.111 14.25 0.00 43.77 5.36
131 132 3.207669 CGAATCAGCTGCCAGCCC 61.208 66.667 14.25 0.00 43.77 5.19
132 133 3.207669 CCGAATCAGCTGCCAGCC 61.208 66.667 14.25 0.00 43.77 4.85
133 134 3.885521 GCCGAATCAGCTGCCAGC 61.886 66.667 9.13 9.13 42.84 4.85
134 135 1.310933 AAAGCCGAATCAGCTGCCAG 61.311 55.000 9.47 0.00 40.49 4.85
135 136 1.303561 AAAGCCGAATCAGCTGCCA 60.304 52.632 9.47 0.00 40.49 4.92
136 137 1.138247 CAAAGCCGAATCAGCTGCC 59.862 57.895 9.47 0.00 40.49 4.85
137 138 0.737219 ATCAAAGCCGAATCAGCTGC 59.263 50.000 9.47 0.00 40.49 5.25
138 139 2.031807 CAGATCAAAGCCGAATCAGCTG 59.968 50.000 7.63 7.63 40.49 4.24
139 140 2.286872 CAGATCAAAGCCGAATCAGCT 58.713 47.619 0.00 0.00 44.19 4.24
140 141 1.332997 CCAGATCAAAGCCGAATCAGC 59.667 52.381 0.00 0.00 0.00 4.26
141 142 1.332997 GCCAGATCAAAGCCGAATCAG 59.667 52.381 0.00 0.00 0.00 2.90
142 143 1.382522 GCCAGATCAAAGCCGAATCA 58.617 50.000 0.00 0.00 0.00 2.57
143 144 0.665298 GGCCAGATCAAAGCCGAATC 59.335 55.000 0.00 0.00 36.84 2.52
144 145 2.799176 GGCCAGATCAAAGCCGAAT 58.201 52.632 0.00 0.00 36.84 3.34
145 146 4.319133 GGCCAGATCAAAGCCGAA 57.681 55.556 0.00 0.00 36.84 4.30
148 149 2.421399 GCTGGGCCAGATCAAAGCC 61.421 63.158 37.07 12.74 46.37 4.35
149 150 1.379576 AGCTGGGCCAGATCAAAGC 60.380 57.895 37.07 20.28 32.44 3.51
150 151 1.094073 CGAGCTGGGCCAGATCAAAG 61.094 60.000 40.99 26.47 45.80 2.77
151 152 1.078214 CGAGCTGGGCCAGATCAAA 60.078 57.895 40.99 4.89 45.80 2.69
152 153 1.964608 CTCGAGCTGGGCCAGATCAA 61.965 60.000 40.99 29.16 45.80 2.57
153 154 2.364186 TCGAGCTGGGCCAGATCA 60.364 61.111 40.99 28.67 45.80 2.92
154 155 2.420890 CTCGAGCTGGGCCAGATC 59.579 66.667 35.92 35.92 42.60 2.75
155 156 2.364842 ACTCGAGCTGGGCCAGAT 60.365 61.111 37.07 32.41 32.44 2.90
156 157 3.385384 CACTCGAGCTGGGCCAGA 61.385 66.667 37.07 15.43 32.44 3.86
157 158 1.395045 TATCACTCGAGCTGGGCCAG 61.395 60.000 29.44 29.44 34.12 4.85
158 159 0.975556 TTATCACTCGAGCTGGGCCA 60.976 55.000 13.61 5.85 0.00 5.36
159 160 0.249657 CTTATCACTCGAGCTGGGCC 60.250 60.000 13.61 0.00 0.00 5.80
160 161 0.878086 GCTTATCACTCGAGCTGGGC 60.878 60.000 13.61 6.16 33.72 5.36
161 162 0.749649 AGCTTATCACTCGAGCTGGG 59.250 55.000 13.61 0.00 44.53 4.45
165 166 1.207390 CTGCAGCTTATCACTCGAGC 58.793 55.000 13.61 0.00 36.68 5.03
166 167 1.207390 GCTGCAGCTTATCACTCGAG 58.793 55.000 31.33 11.84 38.21 4.04
167 168 0.526310 CGCTGCAGCTTATCACTCGA 60.526 55.000 34.22 0.00 39.32 4.04
168 169 0.526310 TCGCTGCAGCTTATCACTCG 60.526 55.000 34.22 16.65 39.32 4.18
169 170 1.325943 GTTCGCTGCAGCTTATCACTC 59.674 52.381 34.22 13.03 39.32 3.51
170 171 1.363744 GTTCGCTGCAGCTTATCACT 58.636 50.000 34.22 0.00 39.32 3.41
171 172 0.375106 GGTTCGCTGCAGCTTATCAC 59.625 55.000 34.22 21.63 39.32 3.06
172 173 1.083806 CGGTTCGCTGCAGCTTATCA 61.084 55.000 34.22 12.10 39.32 2.15
173 174 1.638467 CGGTTCGCTGCAGCTTATC 59.362 57.895 34.22 21.15 39.32 1.75
174 175 1.815421 CCGGTTCGCTGCAGCTTAT 60.815 57.895 34.22 0.00 39.32 1.73
175 176 1.879737 TACCGGTTCGCTGCAGCTTA 61.880 55.000 34.22 20.64 39.32 3.09
176 177 3.234630 TACCGGTTCGCTGCAGCTT 62.235 57.895 34.22 12.96 39.32 3.74
177 178 3.691342 TACCGGTTCGCTGCAGCT 61.691 61.111 34.22 17.59 39.32 4.24
178 179 3.488090 GTACCGGTTCGCTGCAGC 61.488 66.667 29.12 29.12 37.78 5.25
179 180 3.179265 CGTACCGGTTCGCTGCAG 61.179 66.667 20.80 10.11 0.00 4.41
184 185 1.749609 GATCAAGCGTACCGGTTCGC 61.750 60.000 40.68 40.68 45.71 4.70
185 186 0.457166 TGATCAAGCGTACCGGTTCG 60.457 55.000 27.02 27.02 45.71 3.95
186 187 0.997196 GTGATCAAGCGTACCGGTTC 59.003 55.000 15.04 6.83 45.71 3.62
188 189 0.606604 AAGTGATCAAGCGTACCGGT 59.393 50.000 13.98 13.98 40.00 5.28
189 190 0.999406 CAAGTGATCAAGCGTACCGG 59.001 55.000 0.00 0.00 0.00 5.28
190 191 0.999406 CCAAGTGATCAAGCGTACCG 59.001 55.000 0.00 0.00 0.00 4.02
191 192 0.727398 GCCAAGTGATCAAGCGTACC 59.273 55.000 0.00 0.00 0.00 3.34
192 193 0.370273 CGCCAAGTGATCAAGCGTAC 59.630 55.000 17.62 0.00 41.78 3.67
193 194 0.739462 CCGCCAAGTGATCAAGCGTA 60.739 55.000 21.64 0.00 45.06 4.42
194 195 2.034879 CCGCCAAGTGATCAAGCGT 61.035 57.895 21.64 0.00 45.06 5.07
195 196 2.034879 ACCGCCAAGTGATCAAGCG 61.035 57.895 18.47 18.47 46.04 4.68
196 197 1.503542 CACCGCCAAGTGATCAAGC 59.496 57.895 0.00 0.00 40.34 4.01
197 198 1.926511 GCCACCGCCAAGTGATCAAG 61.927 60.000 0.00 0.00 40.34 3.02
198 199 1.971167 GCCACCGCCAAGTGATCAA 60.971 57.895 0.00 0.00 40.34 2.57
199 200 2.359850 GCCACCGCCAAGTGATCA 60.360 61.111 0.00 0.00 40.34 2.92
200 201 1.750399 ATGCCACCGCCAAGTGATC 60.750 57.895 0.00 0.00 40.34 2.92
201 202 2.048023 CATGCCACCGCCAAGTGAT 61.048 57.895 0.00 0.00 40.34 3.06
202 203 2.672651 CATGCCACCGCCAAGTGA 60.673 61.111 0.00 0.00 40.34 3.41
203 204 4.424566 GCATGCCACCGCCAAGTG 62.425 66.667 6.36 0.00 37.51 3.16
204 205 4.972733 TGCATGCCACCGCCAAGT 62.973 61.111 16.68 0.00 0.00 3.16
205 206 4.124351 CTGCATGCCACCGCCAAG 62.124 66.667 16.68 0.00 0.00 3.61
210 211 1.378882 ATTACAGCTGCATGCCACCG 61.379 55.000 16.68 3.89 44.23 4.94
211 212 0.819582 AATTACAGCTGCATGCCACC 59.180 50.000 16.68 3.05 44.23 4.61
212 213 1.202336 GGAATTACAGCTGCATGCCAC 60.202 52.381 16.68 7.13 44.23 5.01
213 214 1.105457 GGAATTACAGCTGCATGCCA 58.895 50.000 16.68 2.21 44.23 4.92
214 215 1.066605 CTGGAATTACAGCTGCATGCC 59.933 52.381 16.68 14.81 44.23 4.40
215 216 1.747355 ACTGGAATTACAGCTGCATGC 59.253 47.619 18.04 11.82 42.21 4.06
216 217 3.011818 TGACTGGAATTACAGCTGCATG 58.988 45.455 18.04 0.00 42.21 4.06
217 218 3.354948 TGACTGGAATTACAGCTGCAT 57.645 42.857 18.04 2.98 42.21 3.96
218 219 2.813754 GTTGACTGGAATTACAGCTGCA 59.186 45.455 18.04 10.61 42.21 4.41
219 220 3.077359 AGTTGACTGGAATTACAGCTGC 58.923 45.455 18.04 8.09 42.21 5.25
220 221 4.573900 AGAGTTGACTGGAATTACAGCTG 58.426 43.478 18.04 13.48 42.21 4.24
221 222 4.619394 CGAGAGTTGACTGGAATTACAGCT 60.619 45.833 18.04 6.42 42.21 4.24
222 223 3.614616 CGAGAGTTGACTGGAATTACAGC 59.385 47.826 18.04 10.91 42.21 4.40
223 224 3.614616 GCGAGAGTTGACTGGAATTACAG 59.385 47.826 16.53 16.53 44.03 2.74
224 225 3.258372 AGCGAGAGTTGACTGGAATTACA 59.742 43.478 0.00 0.00 0.00 2.41
225 226 3.851098 AGCGAGAGTTGACTGGAATTAC 58.149 45.455 0.00 0.00 0.00 1.89
226 227 3.119101 GGAGCGAGAGTTGACTGGAATTA 60.119 47.826 0.00 0.00 0.00 1.40
227 228 2.354203 GGAGCGAGAGTTGACTGGAATT 60.354 50.000 0.00 0.00 0.00 2.17
228 229 1.205893 GGAGCGAGAGTTGACTGGAAT 59.794 52.381 0.00 0.00 0.00 3.01
229 230 0.603569 GGAGCGAGAGTTGACTGGAA 59.396 55.000 0.00 0.00 0.00 3.53
230 231 0.251386 AGGAGCGAGAGTTGACTGGA 60.251 55.000 0.00 0.00 0.00 3.86
231 232 0.605589 AAGGAGCGAGAGTTGACTGG 59.394 55.000 0.00 0.00 0.00 4.00
232 233 2.064762 CAAAGGAGCGAGAGTTGACTG 58.935 52.381 0.00 0.00 0.00 3.51
233 234 1.964223 TCAAAGGAGCGAGAGTTGACT 59.036 47.619 0.00 0.00 0.00 3.41
234 235 2.440539 TCAAAGGAGCGAGAGTTGAC 57.559 50.000 0.00 0.00 0.00 3.18
235 236 3.685139 AATCAAAGGAGCGAGAGTTGA 57.315 42.857 0.00 0.00 33.08 3.18
236 237 4.756084 AAAATCAAAGGAGCGAGAGTTG 57.244 40.909 0.00 0.00 0.00 3.16
237 238 4.821805 TCAAAAATCAAAGGAGCGAGAGTT 59.178 37.500 0.00 0.00 0.00 3.01
238 239 4.389374 TCAAAAATCAAAGGAGCGAGAGT 58.611 39.130 0.00 0.00 0.00 3.24
239 240 4.692625 TCTCAAAAATCAAAGGAGCGAGAG 59.307 41.667 0.00 0.00 0.00 3.20
240 241 4.641396 TCTCAAAAATCAAAGGAGCGAGA 58.359 39.130 0.00 0.00 0.00 4.04
241 242 4.671250 GCTCTCAAAAATCAAAGGAGCGAG 60.671 45.833 0.00 0.00 36.02 5.03
242 243 3.189287 GCTCTCAAAAATCAAAGGAGCGA 59.811 43.478 0.00 0.00 36.02 4.93
243 244 3.058016 TGCTCTCAAAAATCAAAGGAGCG 60.058 43.478 0.00 0.00 44.96 5.03
244 245 4.483311 CTGCTCTCAAAAATCAAAGGAGC 58.517 43.478 0.00 0.00 43.14 4.70
245 246 4.022589 TGCTGCTCTCAAAAATCAAAGGAG 60.023 41.667 0.00 0.00 0.00 3.69
246 247 3.890756 TGCTGCTCTCAAAAATCAAAGGA 59.109 39.130 0.00 0.00 0.00 3.36
247 248 4.022589 TCTGCTGCTCTCAAAAATCAAAGG 60.023 41.667 0.00 0.00 0.00 3.11
248 249 5.117355 TCTGCTGCTCTCAAAAATCAAAG 57.883 39.130 0.00 0.00 0.00 2.77
249 250 5.010314 ACATCTGCTGCTCTCAAAAATCAAA 59.990 36.000 0.00 0.00 0.00 2.69
250 251 4.521639 ACATCTGCTGCTCTCAAAAATCAA 59.478 37.500 0.00 0.00 0.00 2.57
251 252 4.077108 ACATCTGCTGCTCTCAAAAATCA 58.923 39.130 0.00 0.00 0.00 2.57
252 253 4.395542 AGACATCTGCTGCTCTCAAAAATC 59.604 41.667 0.00 0.00 0.00 2.17
253 254 4.333690 AGACATCTGCTGCTCTCAAAAAT 58.666 39.130 0.00 0.00 0.00 1.82
254 255 3.748083 AGACATCTGCTGCTCTCAAAAA 58.252 40.909 0.00 0.00 0.00 1.94
255 256 3.413846 AGACATCTGCTGCTCTCAAAA 57.586 42.857 0.00 0.00 0.00 2.44
256 257 3.678252 GCTAGACATCTGCTGCTCTCAAA 60.678 47.826 0.00 0.00 0.00 2.69
257 258 2.159128 GCTAGACATCTGCTGCTCTCAA 60.159 50.000 0.00 0.00 0.00 3.02
258 259 1.408340 GCTAGACATCTGCTGCTCTCA 59.592 52.381 0.00 0.00 0.00 3.27
259 260 1.682854 AGCTAGACATCTGCTGCTCTC 59.317 52.381 0.00 0.00 35.54 3.20
260 261 1.682854 GAGCTAGACATCTGCTGCTCT 59.317 52.381 18.03 0.00 39.56 4.09
261 262 1.269726 GGAGCTAGACATCTGCTGCTC 60.270 57.143 17.49 17.49 41.01 4.26
262 263 0.752054 GGAGCTAGACATCTGCTGCT 59.248 55.000 13.56 10.02 41.01 4.24
263 264 0.752054 AGGAGCTAGACATCTGCTGC 59.248 55.000 13.20 13.20 43.80 5.25
264 265 2.030371 TGAGGAGCTAGACATCTGCTG 58.970 52.381 9.59 0.00 37.16 4.41
265 266 2.309613 CTGAGGAGCTAGACATCTGCT 58.690 52.381 0.00 5.79 40.02 4.24
266 267 1.269726 GCTGAGGAGCTAGACATCTGC 60.270 57.143 13.98 13.98 42.52 4.26
267 268 2.798976 GCTGAGGAGCTAGACATCTG 57.201 55.000 0.00 0.00 42.52 2.90
277 278 0.818296 TTTACGAGGAGCTGAGGAGC 59.182 55.000 0.00 0.00 46.64 4.70
278 279 3.810310 ATTTTACGAGGAGCTGAGGAG 57.190 47.619 0.00 0.00 0.00 3.69
279 280 4.021229 TGTATTTTACGAGGAGCTGAGGA 58.979 43.478 0.00 0.00 0.00 3.71
280 281 4.142138 ACTGTATTTTACGAGGAGCTGAGG 60.142 45.833 0.00 0.00 0.00 3.86
281 282 5.000012 ACTGTATTTTACGAGGAGCTGAG 58.000 43.478 0.00 0.00 0.00 3.35
282 283 5.448225 CGTACTGTATTTTACGAGGAGCTGA 60.448 44.000 0.00 0.00 43.01 4.26
283 284 4.733887 CGTACTGTATTTTACGAGGAGCTG 59.266 45.833 0.00 0.00 43.01 4.24
284 285 4.732938 GCGTACTGTATTTTACGAGGAGCT 60.733 45.833 5.38 0.00 43.01 4.09
285 286 3.485013 GCGTACTGTATTTTACGAGGAGC 59.515 47.826 5.38 0.00 43.01 4.70
286 287 4.918037 AGCGTACTGTATTTTACGAGGAG 58.082 43.478 5.38 0.00 43.01 3.69
287 288 4.970662 AGCGTACTGTATTTTACGAGGA 57.029 40.909 5.38 0.00 43.01 3.71
288 289 4.203764 CGAAGCGTACTGTATTTTACGAGG 59.796 45.833 5.38 0.00 43.01 4.63
289 290 5.280017 CGAAGCGTACTGTATTTTACGAG 57.720 43.478 5.38 0.00 43.01 4.18
338 339 1.742880 GCCGAACGGGTTAACTCCC 60.743 63.158 15.01 0.00 43.78 4.30
339 340 1.004679 TGCCGAACGGGTTAACTCC 60.005 57.895 15.01 4.41 38.44 3.85
340 341 0.600782 TGTGCCGAACGGGTTAACTC 60.601 55.000 15.01 0.00 38.44 3.01
341 342 0.601841 CTGTGCCGAACGGGTTAACT 60.602 55.000 15.01 0.00 38.44 2.24
342 343 1.864176 CTGTGCCGAACGGGTTAAC 59.136 57.895 15.01 0.00 38.44 2.01
343 344 1.962306 GCTGTGCCGAACGGGTTAA 60.962 57.895 15.01 0.00 38.44 2.01
344 345 2.357760 GCTGTGCCGAACGGGTTA 60.358 61.111 15.01 0.00 38.44 2.85
345 346 4.250305 AGCTGTGCCGAACGGGTT 62.250 61.111 15.01 0.00 43.47 4.11
348 349 4.680237 TGGAGCTGTGCCGAACGG 62.680 66.667 9.00 9.00 38.30 4.44
349 350 2.175184 CTTTGGAGCTGTGCCGAACG 62.175 60.000 0.00 0.00 0.00 3.95
350 351 1.576421 CTTTGGAGCTGTGCCGAAC 59.424 57.895 0.00 0.00 0.00 3.95
351 352 2.260869 GCTTTGGAGCTGTGCCGAA 61.261 57.895 0.00 0.00 45.65 4.30
352 353 2.669569 GCTTTGGAGCTGTGCCGA 60.670 61.111 0.00 0.00 45.65 5.54
362 363 1.704628 TCCATCAACTCCAGCTTTGGA 59.295 47.619 0.00 0.00 36.40 3.53
363 364 2.089980 CTCCATCAACTCCAGCTTTGG 58.910 52.381 0.00 0.00 0.00 3.28
364 365 2.787994 ACTCCATCAACTCCAGCTTTG 58.212 47.619 0.00 0.00 0.00 2.77
365 366 3.152341 CAACTCCATCAACTCCAGCTTT 58.848 45.455 0.00 0.00 0.00 3.51
366 367 2.553904 CCAACTCCATCAACTCCAGCTT 60.554 50.000 0.00 0.00 0.00 3.74
367 368 1.004044 CCAACTCCATCAACTCCAGCT 59.996 52.381 0.00 0.00 0.00 4.24
368 369 1.457346 CCAACTCCATCAACTCCAGC 58.543 55.000 0.00 0.00 0.00 4.85
369 370 1.630369 TCCCAACTCCATCAACTCCAG 59.370 52.381 0.00 0.00 0.00 3.86
370 371 1.630369 CTCCCAACTCCATCAACTCCA 59.370 52.381 0.00 0.00 0.00 3.86
371 372 1.680249 GCTCCCAACTCCATCAACTCC 60.680 57.143 0.00 0.00 0.00 3.85
372 373 1.280421 AGCTCCCAACTCCATCAACTC 59.720 52.381 0.00 0.00 0.00 3.01
373 374 1.004044 CAGCTCCCAACTCCATCAACT 59.996 52.381 0.00 0.00 0.00 3.16
374 375 1.457346 CAGCTCCCAACTCCATCAAC 58.543 55.000 0.00 0.00 0.00 3.18
375 376 0.329261 CCAGCTCCCAACTCCATCAA 59.671 55.000 0.00 0.00 0.00 2.57
376 377 0.547471 TCCAGCTCCCAACTCCATCA 60.547 55.000 0.00 0.00 0.00 3.07
377 378 0.179936 CTCCAGCTCCCAACTCCATC 59.820 60.000 0.00 0.00 0.00 3.51
378 379 0.252881 TCTCCAGCTCCCAACTCCAT 60.253 55.000 0.00 0.00 0.00 3.41
379 380 0.906756 CTCTCCAGCTCCCAACTCCA 60.907 60.000 0.00 0.00 0.00 3.86
380 381 1.904032 CTCTCCAGCTCCCAACTCC 59.096 63.158 0.00 0.00 0.00 3.85
381 382 1.220477 GCTCTCCAGCTCCCAACTC 59.780 63.158 0.00 0.00 43.09 3.01
382 383 3.397906 GCTCTCCAGCTCCCAACT 58.602 61.111 0.00 0.00 43.09 3.16
391 392 0.671781 CCTGTTCGGTTGCTCTCCAG 60.672 60.000 0.00 0.00 0.00 3.86
392 393 1.371183 CCTGTTCGGTTGCTCTCCA 59.629 57.895 0.00 0.00 0.00 3.86
393 394 2.035442 GCCTGTTCGGTTGCTCTCC 61.035 63.158 0.00 0.00 34.25 3.71
394 395 1.004440 AGCCTGTTCGGTTGCTCTC 60.004 57.895 0.00 0.00 34.25 3.20
395 396 1.004440 GAGCCTGTTCGGTTGCTCT 60.004 57.895 0.00 0.00 45.21 4.09
396 397 3.567473 GAGCCTGTTCGGTTGCTC 58.433 61.111 0.00 0.00 42.89 4.26
397 398 0.685097 TTAGAGCCTGTTCGGTTGCT 59.315 50.000 0.00 0.00 36.62 3.91
398 399 1.197036 GTTTAGAGCCTGTTCGGTTGC 59.803 52.381 0.00 0.00 34.25 4.17
399 400 2.223377 GTGTTTAGAGCCTGTTCGGTTG 59.777 50.000 0.00 0.00 34.25 3.77
400 401 2.104281 AGTGTTTAGAGCCTGTTCGGTT 59.896 45.455 0.00 0.00 34.25 4.44
401 402 1.692519 AGTGTTTAGAGCCTGTTCGGT 59.307 47.619 0.00 0.00 34.25 4.69
402 403 2.069273 CAGTGTTTAGAGCCTGTTCGG 58.931 52.381 0.00 0.00 0.00 4.30
403 404 2.755650 ACAGTGTTTAGAGCCTGTTCG 58.244 47.619 0.00 0.00 34.64 3.95
404 405 5.932303 TGATAACAGTGTTTAGAGCCTGTTC 59.068 40.000 14.90 0.00 44.57 3.18
405 406 5.865085 TGATAACAGTGTTTAGAGCCTGTT 58.135 37.500 14.90 8.69 46.62 3.16
406 407 5.483685 TGATAACAGTGTTTAGAGCCTGT 57.516 39.130 14.90 0.00 39.73 4.00
407 408 6.237942 CGAATGATAACAGTGTTTAGAGCCTG 60.238 42.308 14.90 0.00 0.00 4.85
408 409 5.812642 CGAATGATAACAGTGTTTAGAGCCT 59.187 40.000 14.90 0.00 0.00 4.58
409 410 5.502544 GCGAATGATAACAGTGTTTAGAGCC 60.503 44.000 14.90 0.00 0.00 4.70
410 411 5.063438 TGCGAATGATAACAGTGTTTAGAGC 59.937 40.000 14.90 11.20 0.00 4.09
411 412 6.647212 TGCGAATGATAACAGTGTTTAGAG 57.353 37.500 14.90 1.51 0.00 2.43
412 413 7.428282 TTTGCGAATGATAACAGTGTTTAGA 57.572 32.000 14.90 0.00 0.00 2.10
413 414 8.500837 TTTTTGCGAATGATAACAGTGTTTAG 57.499 30.769 14.90 0.00 0.00 1.85
441 442 9.716531 GGGAGTAAGTAATAACAGTGTTTAGTT 57.283 33.333 14.90 12.43 0.00 2.24
442 443 9.097946 AGGGAGTAAGTAATAACAGTGTTTAGT 57.902 33.333 14.90 2.03 0.00 2.24
443 444 9.583765 GAGGGAGTAAGTAATAACAGTGTTTAG 57.416 37.037 14.90 0.00 0.00 1.85
444 445 8.534496 GGAGGGAGTAAGTAATAACAGTGTTTA 58.466 37.037 14.90 0.00 0.00 2.01
445 446 7.392418 GGAGGGAGTAAGTAATAACAGTGTTT 58.608 38.462 14.90 0.00 0.00 2.83
446 447 6.350780 CGGAGGGAGTAAGTAATAACAGTGTT 60.351 42.308 14.05 14.05 0.00 3.32
447 448 5.126707 CGGAGGGAGTAAGTAATAACAGTGT 59.873 44.000 0.00 0.00 0.00 3.55
448 449 5.126707 ACGGAGGGAGTAAGTAATAACAGTG 59.873 44.000 0.00 0.00 0.00 3.66
449 450 5.267587 ACGGAGGGAGTAAGTAATAACAGT 58.732 41.667 0.00 0.00 0.00 3.55
450 451 5.848833 ACGGAGGGAGTAAGTAATAACAG 57.151 43.478 0.00 0.00 0.00 3.16
451 452 5.127682 GGAACGGAGGGAGTAAGTAATAACA 59.872 44.000 0.00 0.00 0.00 2.41
452 453 5.127682 TGGAACGGAGGGAGTAAGTAATAAC 59.872 44.000 0.00 0.00 0.00 1.89
453 454 5.271598 TGGAACGGAGGGAGTAAGTAATAA 58.728 41.667 0.00 0.00 0.00 1.40
454 455 4.870636 TGGAACGGAGGGAGTAAGTAATA 58.129 43.478 0.00 0.00 0.00 0.98
455 456 3.716431 TGGAACGGAGGGAGTAAGTAAT 58.284 45.455 0.00 0.00 0.00 1.89
456 457 3.173953 TGGAACGGAGGGAGTAAGTAA 57.826 47.619 0.00 0.00 0.00 2.24
457 458 2.905415 TGGAACGGAGGGAGTAAGTA 57.095 50.000 0.00 0.00 0.00 2.24
458 459 2.019807 TTGGAACGGAGGGAGTAAGT 57.980 50.000 0.00 0.00 0.00 2.24
459 460 3.412237 TTTTGGAACGGAGGGAGTAAG 57.588 47.619 0.00 0.00 0.00 2.34
460 461 4.778958 TCTATTTTGGAACGGAGGGAGTAA 59.221 41.667 0.00 0.00 0.00 2.24
461 462 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
462 463 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
463 464 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
464 465 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
465 466 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
466 467 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
467 468 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
468 469 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
469 470 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
470 471 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
471 472 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
472 473 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
473 474 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
474 475 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
480 481 9.298250 AGAGTTAGTACAAAGTTGAGTCATCTA 57.702 33.333 4.14 0.00 0.00 1.98
481 482 8.184304 AGAGTTAGTACAAAGTTGAGTCATCT 57.816 34.615 0.00 0.00 0.00 2.90
482 483 9.562583 CTAGAGTTAGTACAAAGTTGAGTCATC 57.437 37.037 0.00 0.00 0.00 2.92
483 484 9.080097 ACTAGAGTTAGTACAAAGTTGAGTCAT 57.920 33.333 0.00 0.00 38.35 3.06
484 485 8.461249 ACTAGAGTTAGTACAAAGTTGAGTCA 57.539 34.615 0.00 0.00 38.35 3.41
511 512 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
512 513 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
513 514 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
514 515 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
515 516 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
516 517 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
517 518 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
518 519 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
519 520 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
520 521 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
521 522 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
522 523 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
523 524 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
524 525 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
525 526 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
526 527 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
527 528 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
528 529 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
529 530 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
530 531 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
531 532 2.905415 TAAGTACTCCCTCCGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
532 533 4.280425 CCTAATAAGTACTCCCTCCGTTCC 59.720 50.000 0.00 0.00 0.00 3.62
533 534 4.892345 ACCTAATAAGTACTCCCTCCGTTC 59.108 45.833 0.00 0.00 0.00 3.95
534 535 4.876580 ACCTAATAAGTACTCCCTCCGTT 58.123 43.478 0.00 0.00 0.00 4.44
535 536 4.533001 ACCTAATAAGTACTCCCTCCGT 57.467 45.455 0.00 0.00 0.00 4.69
536 537 4.891756 TCAACCTAATAAGTACTCCCTCCG 59.108 45.833 0.00 0.00 0.00 4.63
537 538 5.659971 TGTCAACCTAATAAGTACTCCCTCC 59.340 44.000 0.00 0.00 0.00 4.30
538 539 6.786967 TGTCAACCTAATAAGTACTCCCTC 57.213 41.667 0.00 0.00 0.00 4.30
539 540 7.182206 ACATTGTCAACCTAATAAGTACTCCCT 59.818 37.037 0.00 0.00 0.00 4.20
540 541 7.336396 ACATTGTCAACCTAATAAGTACTCCC 58.664 38.462 0.00 0.00 0.00 4.30
545 546 9.116067 GCCAATACATTGTCAACCTAATAAGTA 57.884 33.333 0.00 0.00 36.06 2.24
546 547 7.613801 TGCCAATACATTGTCAACCTAATAAGT 59.386 33.333 0.00 0.00 36.06 2.24
547 548 7.995289 TGCCAATACATTGTCAACCTAATAAG 58.005 34.615 0.00 0.00 36.06 1.73
572 573 2.019249 ACAGACATGCGCATTGCTTAT 58.981 42.857 22.81 8.38 46.63 1.73
583 584 1.542915 ACATGGAAGCAACAGACATGC 59.457 47.619 0.00 0.00 41.85 4.06
584 585 2.815503 TCACATGGAAGCAACAGACATG 59.184 45.455 0.00 0.00 43.29 3.21
599 600 0.874390 CCGTTTGGTGGACTCACATG 59.126 55.000 0.00 0.00 45.32 3.21
633 635 3.740115 TCAGAGTTGGACTACTTTTGCC 58.260 45.455 0.00 0.00 0.00 4.52
727 732 3.181490 ACGATTCGTGCTGCTTGATACTA 60.181 43.478 11.56 0.00 39.18 1.82
728 733 2.196749 CGATTCGTGCTGCTTGATACT 58.803 47.619 0.00 0.00 0.00 2.12
729 734 1.927174 ACGATTCGTGCTGCTTGATAC 59.073 47.619 11.56 0.00 39.18 2.24
793 798 2.202892 GGTTCTGGACGGATCGGC 60.203 66.667 0.00 0.00 0.00 5.54
800 805 2.696506 GGGTTTAGAAGGTTCTGGACG 58.303 52.381 2.32 0.00 38.19 4.79
924 934 2.301346 CCCTCTCTCTCTCTCTTCTGC 58.699 57.143 0.00 0.00 0.00 4.26
925 935 2.423373 CCCCCTCTCTCTCTCTCTTCTG 60.423 59.091 0.00 0.00 0.00 3.02
927 937 2.364972 CCCCCTCTCTCTCTCTCTTC 57.635 60.000 0.00 0.00 0.00 2.87
944 964 2.503765 CTCTTTCTCTCTCCTTTCCCCC 59.496 54.545 0.00 0.00 0.00 5.40
945 965 3.445987 TCTCTTTCTCTCTCCTTTCCCC 58.554 50.000 0.00 0.00 0.00 4.81
946 966 5.247337 TCTTTCTCTTTCTCTCTCCTTTCCC 59.753 44.000 0.00 0.00 0.00 3.97
947 967 6.353404 TCTTTCTCTTTCTCTCTCCTTTCC 57.647 41.667 0.00 0.00 0.00 3.13
948 968 7.666623 TCTTCTTTCTCTTTCTCTCTCCTTTC 58.333 38.462 0.00 0.00 0.00 2.62
949 969 7.508977 TCTCTTCTTTCTCTTTCTCTCTCCTTT 59.491 37.037 0.00 0.00 0.00 3.11
950 970 7.010160 TCTCTTCTTTCTCTTTCTCTCTCCTT 58.990 38.462 0.00 0.00 0.00 3.36
951 971 6.552008 TCTCTTCTTTCTCTTTCTCTCTCCT 58.448 40.000 0.00 0.00 0.00 3.69
952 972 6.659242 TCTCTCTTCTTTCTCTTTCTCTCTCC 59.341 42.308 0.00 0.00 0.00 3.71
953 973 7.607991 TCTCTCTCTTCTTTCTCTTTCTCTCTC 59.392 40.741 0.00 0.00 0.00 3.20
977 997 3.964031 GGTCTCTCTCTCTCTCTCTCTCT 59.036 52.174 0.00 0.00 0.00 3.10
1218 1313 1.599797 CACAGGTGGGGAACGGAAC 60.600 63.158 0.00 0.00 0.00 3.62
1383 3271 1.003580 AGTTGCAACGTCCTCCATCAT 59.996 47.619 23.21 0.00 0.00 2.45
1613 3516 1.766143 GCATCTCGATGTGGCGGTTC 61.766 60.000 8.54 0.00 40.80 3.62
1621 3524 2.107750 CAGCGGGCATCTCGATGT 59.892 61.111 8.54 0.00 40.80 3.06
1858 3796 4.115516 CAACTCGATCCAAGACGATCAAT 58.884 43.478 0.00 0.00 38.91 2.57
1912 3851 5.393135 GCCAAACTAGAGGAAAATAACAGGC 60.393 44.000 0.00 0.00 0.00 4.85
1913 3852 5.710099 TGCCAAACTAGAGGAAAATAACAGG 59.290 40.000 0.00 0.00 0.00 4.00
1920 3860 5.584649 CGTCATATGCCAAACTAGAGGAAAA 59.415 40.000 0.00 0.00 0.00 2.29
1943 3890 4.822036 TTTCACCACCAATGTAAGTTCG 57.178 40.909 0.00 0.00 0.00 3.95
1952 3899 4.158786 TCATGACCAATTTCACCACCAAT 58.841 39.130 0.00 0.00 0.00 3.16
2086 4035 5.715070 TCAACAAAGTTCACGACCAATTTT 58.285 33.333 0.00 0.00 0.00 1.82
2138 4087 7.039363 AGGCGAGACTAGCTTAAGATAATCAAT 60.039 37.037 11.37 0.00 34.52 2.57
2172 4130 6.312426 AGCAATACAGATCAAGAACGAGAAAG 59.688 38.462 0.00 0.00 0.00 2.62
2253 4213 1.315690 TGACGTCAAACTCGAGGAGT 58.684 50.000 17.62 6.88 45.64 3.85
2326 4286 6.128742 GCAAGCAAAAATTAACAGACTCCATG 60.129 38.462 0.00 0.00 0.00 3.66
2328 4288 5.068987 AGCAAGCAAAAATTAACAGACTCCA 59.931 36.000 0.00 0.00 0.00 3.86
2329 4289 5.532557 AGCAAGCAAAAATTAACAGACTCC 58.467 37.500 0.00 0.00 0.00 3.85
2330 4290 7.468922 AAAGCAAGCAAAAATTAACAGACTC 57.531 32.000 0.00 0.00 0.00 3.36
2331 4291 7.848223 AAAAGCAAGCAAAAATTAACAGACT 57.152 28.000 0.00 0.00 0.00 3.24
2332 4292 7.639850 GGAAAAAGCAAGCAAAAATTAACAGAC 59.360 33.333 0.00 0.00 0.00 3.51
2335 4295 7.622893 AGGAAAAAGCAAGCAAAAATTAACA 57.377 28.000 0.00 0.00 0.00 2.41
2336 4296 8.180920 TCAAGGAAAAAGCAAGCAAAAATTAAC 58.819 29.630 0.00 0.00 0.00 2.01
2337 4297 8.273780 TCAAGGAAAAAGCAAGCAAAAATTAA 57.726 26.923 0.00 0.00 0.00 1.40
2338 4298 7.552330 ACTCAAGGAAAAAGCAAGCAAAAATTA 59.448 29.630 0.00 0.00 0.00 1.40
2339 4299 6.375174 ACTCAAGGAAAAAGCAAGCAAAAATT 59.625 30.769 0.00 0.00 0.00 1.82
2340 4300 5.882000 ACTCAAGGAAAAAGCAAGCAAAAAT 59.118 32.000 0.00 0.00 0.00 1.82
2341 4301 5.244755 ACTCAAGGAAAAAGCAAGCAAAAA 58.755 33.333 0.00 0.00 0.00 1.94
2342 4302 4.831107 ACTCAAGGAAAAAGCAAGCAAAA 58.169 34.783 0.00 0.00 0.00 2.44
2343 4303 4.470334 ACTCAAGGAAAAAGCAAGCAAA 57.530 36.364 0.00 0.00 0.00 3.68
2344 4304 4.470334 AACTCAAGGAAAAAGCAAGCAA 57.530 36.364 0.00 0.00 0.00 3.91
2345 4305 4.470334 AAACTCAAGGAAAAAGCAAGCA 57.530 36.364 0.00 0.00 0.00 3.91
2346 4306 6.042777 AGTTAAACTCAAGGAAAAAGCAAGC 58.957 36.000 0.00 0.00 0.00 4.01
2347 4307 7.976175 AGAAGTTAAACTCAAGGAAAAAGCAAG 59.024 33.333 0.00 0.00 0.00 4.01
2348 4308 7.836842 AGAAGTTAAACTCAAGGAAAAAGCAA 58.163 30.769 0.00 0.00 0.00 3.91
2349 4309 7.404671 AGAAGTTAAACTCAAGGAAAAAGCA 57.595 32.000 0.00 0.00 0.00 3.91
2350 4310 7.759886 ACAAGAAGTTAAACTCAAGGAAAAAGC 59.240 33.333 0.00 0.00 0.00 3.51
2390 4350 6.061441 TCATGTGACAACTACAAACTGGAAT 58.939 36.000 0.00 0.00 0.00 3.01
2425 4386 4.319177 ACGAAGCAGCAGATAAAGAAACT 58.681 39.130 0.00 0.00 0.00 2.66
2430 4391 4.871993 ATCAACGAAGCAGCAGATAAAG 57.128 40.909 0.00 0.00 0.00 1.85
2436 4397 3.058708 TGAGAAAATCAACGAAGCAGCAG 60.059 43.478 0.00 0.00 34.02 4.24
2438 4399 3.542712 TGAGAAAATCAACGAAGCAGC 57.457 42.857 0.00 0.00 34.02 5.25
2480 4441 9.319143 CCAACAAATCAGTTAACCACATAAAAA 57.681 29.630 0.88 0.00 0.00 1.94
2481 4442 8.478877 ACCAACAAATCAGTTAACCACATAAAA 58.521 29.630 0.88 0.00 0.00 1.52
2482 4443 8.012957 ACCAACAAATCAGTTAACCACATAAA 57.987 30.769 0.88 0.00 0.00 1.40
2483 4444 7.589958 ACCAACAAATCAGTTAACCACATAA 57.410 32.000 0.88 0.00 0.00 1.90
2484 4445 7.255660 GGAACCAACAAATCAGTTAACCACATA 60.256 37.037 0.88 0.00 0.00 2.29
2485 4446 6.462347 GGAACCAACAAATCAGTTAACCACAT 60.462 38.462 0.88 0.00 0.00 3.21
2486 4447 5.163499 GGAACCAACAAATCAGTTAACCACA 60.163 40.000 0.88 0.00 0.00 4.17
2487 4448 5.286438 GGAACCAACAAATCAGTTAACCAC 58.714 41.667 0.88 0.00 0.00 4.16
2488 4449 5.523438 GGAACCAACAAATCAGTTAACCA 57.477 39.130 0.88 0.00 0.00 3.67
2528 4489 4.506886 ACGAGAAGTAAACACAGAGGAG 57.493 45.455 0.00 0.00 0.00 3.69
2547 4508 4.050553 TGAAACGGGTTACTGTTCTTACG 58.949 43.478 0.00 0.00 45.24 3.18
2563 4524 4.855388 ACGCTACAACTACATACTGAAACG 59.145 41.667 0.00 0.00 0.00 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.