Multiple sequence alignment - TraesCS7B01G129400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G129400 chr7B 100.000 3189 0 0 1 3189 154773928 154770740 0.000000e+00 5890.0
1 TraesCS7B01G129400 chr7B 88.925 307 30 3 391 693 218525644 218525950 3.000000e-100 375.0
2 TraesCS7B01G129400 chr7A 90.775 2298 143 34 906 3189 191909850 191907608 0.000000e+00 3005.0
3 TraesCS7B01G129400 chr7D 92.241 1495 76 16 1702 3189 184936852 184935391 0.000000e+00 2082.0
4 TraesCS7B01G129400 chr7D 94.480 779 37 2 901 1679 184937620 184936848 0.000000e+00 1195.0
5 TraesCS7B01G129400 chr7D 95.308 341 16 0 1 341 184938086 184937746 2.800000e-150 542.0
6 TraesCS7B01G129400 chr7D 88.514 296 32 2 396 689 40716526 40716231 1.090000e-94 357.0
7 TraesCS7B01G129400 chr7D 87.789 303 33 3 391 689 141345334 141345636 5.060000e-93 351.0
8 TraesCS7B01G129400 chr7D 100.000 28 0 0 691 718 184937644 184937617 6.000000e-03 52.8
9 TraesCS7B01G129400 chr5B 88.704 301 29 4 393 689 635258641 635258940 2.340000e-96 363.0
10 TraesCS7B01G129400 chr5B 87.580 314 33 5 393 701 8364006 8364318 3.020000e-95 359.0
11 TraesCS7B01G129400 chr5B 89.744 195 17 3 718 911 697855051 697854859 2.460000e-61 246.0
12 TraesCS7B01G129400 chr4D 87.742 310 31 6 392 696 101499098 101498791 3.910000e-94 355.0
13 TraesCS7B01G129400 chr1A 87.708 301 35 1 391 689 11647931 11648231 1.820000e-92 350.0
14 TraesCS7B01G129400 chr1A 90.206 194 16 3 716 908 582559480 582559671 1.900000e-62 250.0
15 TraesCS7B01G129400 chr2D 86.971 307 36 3 392 694 81244792 81245098 3.050000e-90 342.0
16 TraesCS7B01G129400 chr2D 90.576 191 15 3 715 904 132068571 132068383 1.900000e-62 250.0
17 TraesCS7B01G129400 chr2A 87.171 304 35 3 393 693 611294262 611293960 3.050000e-90 342.0
18 TraesCS7B01G129400 chr4A 91.758 182 13 2 720 901 712366700 712366521 5.280000e-63 252.0
19 TraesCS7B01G129400 chrUn 90.155 193 16 3 718 909 255618818 255618628 6.830000e-62 248.0
20 TraesCS7B01G129400 chrUn 89.796 196 17 3 715 909 347383958 347384151 6.830000e-62 248.0
21 TraesCS7B01G129400 chrUn 89.796 196 17 3 715 909 404982494 404982687 6.830000e-62 248.0
22 TraesCS7B01G129400 chr1B 90.155 193 16 3 718 909 528498405 528498215 6.830000e-62 248.0
23 TraesCS7B01G129400 chr1B 90.104 192 16 3 715 905 150647258 150647069 2.460000e-61 246.0
24 TraesCS7B01G129400 chr5A 94.505 91 5 0 1013 1103 689661627 689661537 1.190000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G129400 chr7B 154770740 154773928 3188 True 5890.00 5890 100.00000 1 3189 1 chr7B.!!$R1 3188
1 TraesCS7B01G129400 chr7A 191907608 191909850 2242 True 3005.00 3005 90.77500 906 3189 1 chr7A.!!$R1 2283
2 TraesCS7B01G129400 chr7D 184935391 184938086 2695 True 967.95 2082 95.50725 1 3189 4 chr7D.!!$R2 3188

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
683 749 0.028374 GCTTGCGTTTGTACCGTGTT 59.972 50.0 0.0 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2249 2319 0.034337 CCAAGTTCGTCCCGGAGAAA 59.966 55.0 0.73 0.0 0.0 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.229658 CTCAACCTCCTCCCACCCT 60.230 63.158 0.00 0.00 0.00 4.34
28 29 0.701310 AACCTCCTCCCACCCTTGTT 60.701 55.000 0.00 0.00 0.00 2.83
67 68 2.991167 ATCCCTCTAAGCCCCGCCAT 62.991 60.000 0.00 0.00 0.00 4.40
82 83 3.016736 CCGCCATACCATTGAAGAACTT 58.983 45.455 0.00 0.00 0.00 2.66
93 94 1.974957 TGAAGAACTTCGGTGATCCCA 59.025 47.619 9.51 0.00 42.28 4.37
150 151 3.830755 TGGCTTCCCCGTAAGATAGATAC 59.169 47.826 0.00 0.00 43.02 2.24
154 155 5.419471 GCTTCCCCGTAAGATAGATACTGAT 59.581 44.000 0.00 0.00 43.02 2.90
162 163 6.035435 CGTAAGATAGATACTGATGCAATGGC 59.965 42.308 0.00 0.00 43.02 4.40
179 180 6.709397 TGCAATGGCTTCTTCTAAGATAGATG 59.291 38.462 0.00 0.00 41.91 2.90
184 185 5.512232 GGCTTCTTCTAAGATAGATGGTGGG 60.512 48.000 0.00 0.00 34.49 4.61
185 186 5.071115 GCTTCTTCTAAGATAGATGGTGGGT 59.929 44.000 0.00 0.00 34.49 4.51
187 188 5.148502 TCTTCTAAGATAGATGGTGGGTCC 58.851 45.833 0.00 0.00 34.22 4.46
196 197 3.319198 GGTGGGTCCGCCTCTTCA 61.319 66.667 12.08 0.00 42.89 3.02
221 222 5.947228 TGAACTAGAAAAAGTGGCTGATG 57.053 39.130 0.00 0.00 0.00 3.07
242 243 1.200020 CGAAGACAATTTCCAGGCACC 59.800 52.381 0.00 0.00 0.00 5.01
312 313 8.186178 ACGTGTATTTGATGTTGTAGATCTTC 57.814 34.615 0.00 0.00 0.00 2.87
350 351 9.485206 TGTTGAGTCAATAGTTAAACCTAGAAC 57.515 33.333 9.18 0.00 0.00 3.01
351 352 9.708092 GTTGAGTCAATAGTTAAACCTAGAACT 57.292 33.333 9.18 0.00 39.25 3.01
353 354 9.706691 TGAGTCAATAGTTAAACCTAGAACTTG 57.293 33.333 0.39 0.00 37.16 3.16
354 355 9.924650 GAGTCAATAGTTAAACCTAGAACTTGA 57.075 33.333 0.39 0.00 37.16 3.02
377 443 8.473358 TGAATTATATTGGAACCGAGAGAGTA 57.527 34.615 0.00 0.00 0.00 2.59
378 444 8.920174 TGAATTATATTGGAACCGAGAGAGTAA 58.080 33.333 0.00 0.00 0.00 2.24
379 445 9.194271 GAATTATATTGGAACCGAGAGAGTAAC 57.806 37.037 0.00 0.00 0.00 2.50
380 446 7.893124 TTATATTGGAACCGAGAGAGTAACT 57.107 36.000 0.00 0.00 0.00 2.24
381 447 8.985315 TTATATTGGAACCGAGAGAGTAACTA 57.015 34.615 0.00 0.00 0.00 2.24
382 448 7.893124 ATATTGGAACCGAGAGAGTAACTAA 57.107 36.000 0.00 0.00 0.00 2.24
383 449 6.793505 ATTGGAACCGAGAGAGTAACTAAT 57.206 37.500 0.00 0.00 0.00 1.73
384 450 5.578005 TGGAACCGAGAGAGTAACTAATG 57.422 43.478 0.00 0.00 0.00 1.90
385 451 4.142227 TGGAACCGAGAGAGTAACTAATGC 60.142 45.833 0.00 0.00 0.00 3.56
386 452 4.142227 GGAACCGAGAGAGTAACTAATGCA 60.142 45.833 0.00 0.00 0.00 3.96
387 453 4.640789 ACCGAGAGAGTAACTAATGCAG 57.359 45.455 0.00 0.00 0.00 4.41
388 454 3.181485 ACCGAGAGAGTAACTAATGCAGC 60.181 47.826 0.00 0.00 0.00 5.25
389 455 3.376540 CGAGAGAGTAACTAATGCAGCC 58.623 50.000 0.00 0.00 0.00 4.85
390 456 3.067461 CGAGAGAGTAACTAATGCAGCCT 59.933 47.826 0.00 0.00 0.00 4.58
391 457 4.440802 CGAGAGAGTAACTAATGCAGCCTT 60.441 45.833 0.00 0.00 0.00 4.35
392 458 4.764172 AGAGAGTAACTAATGCAGCCTTG 58.236 43.478 0.00 0.00 0.00 3.61
401 467 2.050077 GCAGCCTTGCGAACCAAC 60.050 61.111 0.00 0.00 41.13 3.77
402 468 2.555547 GCAGCCTTGCGAACCAACT 61.556 57.895 0.00 0.00 41.13 3.16
403 469 2.032981 CAGCCTTGCGAACCAACTT 58.967 52.632 0.00 0.00 0.00 2.66
404 470 0.318107 CAGCCTTGCGAACCAACTTG 60.318 55.000 0.00 0.00 0.00 3.16
405 471 0.751643 AGCCTTGCGAACCAACTTGT 60.752 50.000 0.00 0.00 0.00 3.16
406 472 0.594796 GCCTTGCGAACCAACTTGTG 60.595 55.000 0.00 0.00 0.00 3.33
422 488 4.398319 ACTTGTGGTTGAATGGTTAGAGG 58.602 43.478 0.00 0.00 0.00 3.69
423 489 3.433306 TGTGGTTGAATGGTTAGAGGG 57.567 47.619 0.00 0.00 0.00 4.30
424 490 2.983192 TGTGGTTGAATGGTTAGAGGGA 59.017 45.455 0.00 0.00 0.00 4.20
425 491 3.244770 TGTGGTTGAATGGTTAGAGGGAC 60.245 47.826 0.00 0.00 0.00 4.46
427 493 4.224370 GTGGTTGAATGGTTAGAGGGACTA 59.776 45.833 0.00 0.00 41.55 2.59
428 494 5.036916 TGGTTGAATGGTTAGAGGGACTAT 58.963 41.667 0.00 0.00 41.55 2.12
429 495 5.104527 TGGTTGAATGGTTAGAGGGACTATG 60.105 44.000 0.00 0.00 41.55 2.23
430 496 5.368989 GTTGAATGGTTAGAGGGACTATGG 58.631 45.833 0.00 0.00 41.55 2.74
431 497 4.631234 TGAATGGTTAGAGGGACTATGGT 58.369 43.478 0.00 0.00 41.55 3.55
432 498 5.784023 TGAATGGTTAGAGGGACTATGGTA 58.216 41.667 0.00 0.00 41.55 3.25
433 499 6.390504 TGAATGGTTAGAGGGACTATGGTAT 58.609 40.000 0.00 0.00 41.55 2.73
434 500 6.497259 TGAATGGTTAGAGGGACTATGGTATC 59.503 42.308 0.00 0.00 41.55 2.24
435 501 4.748701 TGGTTAGAGGGACTATGGTATCC 58.251 47.826 0.00 0.00 41.55 2.59
442 508 2.414612 GGACTATGGTATCCCAACCCA 58.585 52.381 0.00 0.00 46.04 4.51
443 509 2.105993 GGACTATGGTATCCCAACCCAC 59.894 54.545 0.00 0.00 46.04 4.61
444 510 2.105993 GACTATGGTATCCCAACCCACC 59.894 54.545 0.00 0.00 46.04 4.61
445 511 2.131854 CTATGGTATCCCAACCCACCA 58.868 52.381 0.00 0.00 46.04 4.17
446 512 0.926293 ATGGTATCCCAACCCACCAG 59.074 55.000 0.00 0.00 46.04 4.00
447 513 1.211567 TGGTATCCCAACCCACCAGG 61.212 60.000 0.00 0.00 37.98 4.45
463 529 1.273327 CCAGGGTTCAAATTCTGGTGC 59.727 52.381 0.00 0.00 41.21 5.01
464 530 2.242043 CAGGGTTCAAATTCTGGTGCT 58.758 47.619 0.00 0.00 0.00 4.40
465 531 2.229784 CAGGGTTCAAATTCTGGTGCTC 59.770 50.000 0.00 0.00 0.00 4.26
466 532 1.200020 GGGTTCAAATTCTGGTGCTCG 59.800 52.381 0.00 0.00 0.00 5.03
467 533 1.880027 GGTTCAAATTCTGGTGCTCGT 59.120 47.619 0.00 0.00 0.00 4.18
468 534 3.071479 GGTTCAAATTCTGGTGCTCGTA 58.929 45.455 0.00 0.00 0.00 3.43
469 535 3.689649 GGTTCAAATTCTGGTGCTCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
470 536 4.156008 GGTTCAAATTCTGGTGCTCGTATT 59.844 41.667 0.00 0.00 0.00 1.89
471 537 5.335661 GGTTCAAATTCTGGTGCTCGTATTT 60.336 40.000 0.00 0.00 0.00 1.40
472 538 6.128117 GGTTCAAATTCTGGTGCTCGTATTTA 60.128 38.462 0.00 0.00 0.00 1.40
473 539 7.415206 GGTTCAAATTCTGGTGCTCGTATTTAT 60.415 37.037 0.00 0.00 0.00 1.40
474 540 7.624360 TCAAATTCTGGTGCTCGTATTTATT 57.376 32.000 0.00 0.00 0.00 1.40
475 541 7.693952 TCAAATTCTGGTGCTCGTATTTATTC 58.306 34.615 0.00 0.00 0.00 1.75
476 542 6.619801 AATTCTGGTGCTCGTATTTATTCC 57.380 37.500 0.00 0.00 0.00 3.01
477 543 5.353394 TTCTGGTGCTCGTATTTATTCCT 57.647 39.130 0.00 0.00 0.00 3.36
478 544 4.693283 TCTGGTGCTCGTATTTATTCCTG 58.307 43.478 0.00 0.00 0.00 3.86
479 545 4.404394 TCTGGTGCTCGTATTTATTCCTGA 59.596 41.667 0.00 0.00 0.00 3.86
480 546 5.092554 TGGTGCTCGTATTTATTCCTGAA 57.907 39.130 0.00 0.00 0.00 3.02
481 547 5.680619 TGGTGCTCGTATTTATTCCTGAAT 58.319 37.500 0.00 0.00 34.93 2.57
482 548 6.119536 TGGTGCTCGTATTTATTCCTGAATT 58.880 36.000 0.00 0.00 32.50 2.17
483 549 6.601613 TGGTGCTCGTATTTATTCCTGAATTT 59.398 34.615 0.00 0.00 32.50 1.82
484 550 7.771361 TGGTGCTCGTATTTATTCCTGAATTTA 59.229 33.333 0.00 0.00 32.50 1.40
485 551 8.784043 GGTGCTCGTATTTATTCCTGAATTTAT 58.216 33.333 0.00 0.00 32.50 1.40
506 572 9.865321 ATTTATTTCAGGATTTCTGTTGATGTG 57.135 29.630 0.00 0.00 43.76 3.21
507 573 4.771590 TTCAGGATTTCTGTTGATGTGC 57.228 40.909 0.00 0.00 43.76 4.57
508 574 3.753815 TCAGGATTTCTGTTGATGTGCA 58.246 40.909 0.00 0.00 43.76 4.57
509 575 4.338012 TCAGGATTTCTGTTGATGTGCAT 58.662 39.130 0.00 0.00 43.76 3.96
510 576 4.768448 TCAGGATTTCTGTTGATGTGCATT 59.232 37.500 0.00 0.00 43.76 3.56
511 577 5.244402 TCAGGATTTCTGTTGATGTGCATTT 59.756 36.000 0.00 0.00 43.76 2.32
512 578 6.433716 TCAGGATTTCTGTTGATGTGCATTTA 59.566 34.615 0.00 0.00 43.76 1.40
513 579 6.750501 CAGGATTTCTGTTGATGTGCATTTAG 59.249 38.462 0.00 0.00 38.64 1.85
514 580 6.435277 AGGATTTCTGTTGATGTGCATTTAGT 59.565 34.615 0.00 0.00 0.00 2.24
515 581 6.529125 GGATTTCTGTTGATGTGCATTTAGTG 59.471 38.462 0.00 0.00 0.00 2.74
516 582 5.375417 TTCTGTTGATGTGCATTTAGTGG 57.625 39.130 0.00 0.00 0.00 4.00
517 583 3.758023 TCTGTTGATGTGCATTTAGTGGG 59.242 43.478 0.00 0.00 0.00 4.61
518 584 3.758023 CTGTTGATGTGCATTTAGTGGGA 59.242 43.478 0.00 0.00 0.00 4.37
519 585 3.758023 TGTTGATGTGCATTTAGTGGGAG 59.242 43.478 0.00 0.00 0.00 4.30
520 586 3.003394 TGATGTGCATTTAGTGGGAGG 57.997 47.619 0.00 0.00 0.00 4.30
521 587 2.575735 TGATGTGCATTTAGTGGGAGGA 59.424 45.455 0.00 0.00 0.00 3.71
522 588 2.787473 TGTGCATTTAGTGGGAGGAG 57.213 50.000 0.00 0.00 0.00 3.69
523 589 2.265367 TGTGCATTTAGTGGGAGGAGA 58.735 47.619 0.00 0.00 0.00 3.71
524 590 2.027192 TGTGCATTTAGTGGGAGGAGAC 60.027 50.000 0.00 0.00 0.00 3.36
525 591 1.207089 TGCATTTAGTGGGAGGAGACG 59.793 52.381 0.00 0.00 0.00 4.18
526 592 1.207329 GCATTTAGTGGGAGGAGACGT 59.793 52.381 0.00 0.00 0.00 4.34
527 593 2.354805 GCATTTAGTGGGAGGAGACGTT 60.355 50.000 0.00 0.00 0.00 3.99
528 594 3.262420 CATTTAGTGGGAGGAGACGTTG 58.738 50.000 0.00 0.00 0.00 4.10
529 595 2.005370 TTAGTGGGAGGAGACGTTGT 57.995 50.000 0.00 0.00 0.00 3.32
530 596 1.542492 TAGTGGGAGGAGACGTTGTC 58.458 55.000 0.00 0.00 0.00 3.18
531 597 1.080705 GTGGGAGGAGACGTTGTCG 60.081 63.158 0.00 0.00 37.67 4.35
547 613 3.786809 TCGTCAACGATGAGGTGTC 57.213 52.632 13.95 0.00 44.22 3.67
548 614 1.244816 TCGTCAACGATGAGGTGTCT 58.755 50.000 13.95 0.00 44.22 3.41
549 615 2.429478 TCGTCAACGATGAGGTGTCTA 58.571 47.619 13.95 0.00 44.22 2.59
550 616 2.815503 TCGTCAACGATGAGGTGTCTAA 59.184 45.455 13.95 0.00 44.22 2.10
551 617 3.253921 TCGTCAACGATGAGGTGTCTAAA 59.746 43.478 13.95 0.00 44.22 1.85
552 618 3.608506 CGTCAACGATGAGGTGTCTAAAG 59.391 47.826 7.17 0.00 43.02 1.85
553 619 4.557205 GTCAACGATGAGGTGTCTAAAGT 58.443 43.478 0.00 0.00 39.03 2.66
554 620 4.386049 GTCAACGATGAGGTGTCTAAAGTG 59.614 45.833 0.00 0.00 39.03 3.16
555 621 4.279922 TCAACGATGAGGTGTCTAAAGTGA 59.720 41.667 0.00 0.00 39.03 3.41
556 622 4.175787 ACGATGAGGTGTCTAAAGTGAC 57.824 45.455 0.00 0.00 37.47 3.67
557 623 3.827302 ACGATGAGGTGTCTAAAGTGACT 59.173 43.478 0.00 0.00 37.79 3.41
558 624 4.281182 ACGATGAGGTGTCTAAAGTGACTT 59.719 41.667 0.00 0.00 37.79 3.01
559 625 5.221461 ACGATGAGGTGTCTAAAGTGACTTT 60.221 40.000 15.57 15.57 37.79 2.66
560 626 5.119279 CGATGAGGTGTCTAAAGTGACTTTG 59.881 44.000 20.06 10.31 37.79 2.77
561 627 5.353394 TGAGGTGTCTAAAGTGACTTTGT 57.647 39.130 20.06 0.00 37.79 2.83
562 628 6.474140 TGAGGTGTCTAAAGTGACTTTGTA 57.526 37.500 20.06 5.54 37.79 2.41
563 629 6.880484 TGAGGTGTCTAAAGTGACTTTGTAA 58.120 36.000 20.06 3.13 37.79 2.41
564 630 7.332557 TGAGGTGTCTAAAGTGACTTTGTAAA 58.667 34.615 20.06 0.90 37.79 2.01
565 631 7.990886 TGAGGTGTCTAAAGTGACTTTGTAAAT 59.009 33.333 20.06 0.94 37.79 1.40
566 632 8.747538 AGGTGTCTAAAGTGACTTTGTAAATT 57.252 30.769 20.06 0.00 37.79 1.82
567 633 9.185680 AGGTGTCTAAAGTGACTTTGTAAATTT 57.814 29.630 20.06 0.00 37.79 1.82
568 634 9.797556 GGTGTCTAAAGTGACTTTGTAAATTTT 57.202 29.630 20.06 0.00 37.79 1.82
583 649 9.743057 TTTGTAAATTTTAAGATGATATGCCGG 57.257 29.630 0.00 0.00 0.00 6.13
584 650 7.367285 TGTAAATTTTAAGATGATATGCCGGC 58.633 34.615 22.73 22.73 0.00 6.13
585 651 6.655078 AAATTTTAAGATGATATGCCGGCT 57.345 33.333 29.70 15.76 0.00 5.52
586 652 5.886960 ATTTTAAGATGATATGCCGGCTC 57.113 39.130 29.70 17.89 0.00 4.70
587 653 4.350368 TTTAAGATGATATGCCGGCTCA 57.650 40.909 29.70 23.34 0.00 4.26
588 654 2.469274 AAGATGATATGCCGGCTCAG 57.531 50.000 29.70 0.00 0.00 3.35
589 655 0.612229 AGATGATATGCCGGCTCAGG 59.388 55.000 29.70 0.00 0.00 3.86
597 663 4.082523 CCGGCTCAGGCTTTCGGA 62.083 66.667 8.34 0.00 41.17 4.55
598 664 2.510238 CGGCTCAGGCTTTCGGAG 60.510 66.667 0.00 0.00 40.06 4.63
599 665 2.124942 GGCTCAGGCTTTCGGAGG 60.125 66.667 0.00 0.00 38.00 4.30
600 666 2.665603 GCTCAGGCTTTCGGAGGT 59.334 61.111 2.25 0.00 38.00 3.85
601 667 1.743252 GCTCAGGCTTTCGGAGGTG 60.743 63.158 2.25 0.00 38.00 4.00
602 668 1.743252 CTCAGGCTTTCGGAGGTGC 60.743 63.158 0.00 0.00 34.66 5.01
603 669 2.177594 CTCAGGCTTTCGGAGGTGCT 62.178 60.000 0.00 0.00 34.66 4.40
604 670 1.743252 CAGGCTTTCGGAGGTGCTC 60.743 63.158 0.00 0.00 0.00 4.26
605 671 2.217038 AGGCTTTCGGAGGTGCTCA 61.217 57.895 0.00 0.00 31.08 4.26
606 672 2.035442 GGCTTTCGGAGGTGCTCAC 61.035 63.158 0.00 0.00 31.08 3.51
607 673 1.301716 GCTTTCGGAGGTGCTCACA 60.302 57.895 2.21 0.00 31.08 3.58
608 674 1.294659 GCTTTCGGAGGTGCTCACAG 61.295 60.000 2.21 0.00 31.08 3.66
609 675 0.671781 CTTTCGGAGGTGCTCACAGG 60.672 60.000 2.21 0.00 31.08 4.00
610 676 2.111999 TTTCGGAGGTGCTCACAGGG 62.112 60.000 2.21 0.00 31.08 4.45
611 677 4.087892 CGGAGGTGCTCACAGGGG 62.088 72.222 2.21 0.00 31.08 4.79
612 678 2.930562 GGAGGTGCTCACAGGGGT 60.931 66.667 2.21 0.00 31.08 4.95
613 679 1.612442 GGAGGTGCTCACAGGGGTA 60.612 63.158 2.21 0.00 31.08 3.69
614 680 1.617947 GGAGGTGCTCACAGGGGTAG 61.618 65.000 2.21 0.00 31.08 3.18
615 681 1.613630 AGGTGCTCACAGGGGTAGG 60.614 63.158 2.21 0.00 0.00 3.18
616 682 2.670148 GGTGCTCACAGGGGTAGGG 61.670 68.421 2.21 0.00 0.00 3.53
617 683 1.918800 GTGCTCACAGGGGTAGGGT 60.919 63.158 0.00 0.00 0.00 4.34
618 684 1.918293 TGCTCACAGGGGTAGGGTG 60.918 63.158 0.00 0.00 0.00 4.61
619 685 1.918800 GCTCACAGGGGTAGGGTGT 60.919 63.158 0.00 0.00 0.00 4.16
620 686 1.983224 CTCACAGGGGTAGGGTGTG 59.017 63.158 0.00 0.00 42.48 3.82
621 687 2.185310 CTCACAGGGGTAGGGTGTGC 62.185 65.000 0.00 0.00 41.17 4.57
622 688 3.319198 ACAGGGGTAGGGTGTGCG 61.319 66.667 0.00 0.00 0.00 5.34
623 689 3.319198 CAGGGGTAGGGTGTGCGT 61.319 66.667 0.00 0.00 0.00 5.24
624 690 3.319198 AGGGGTAGGGTGTGCGTG 61.319 66.667 0.00 0.00 0.00 5.34
625 691 3.633116 GGGGTAGGGTGTGCGTGT 61.633 66.667 0.00 0.00 0.00 4.49
626 692 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
627 693 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
628 694 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
629 695 1.227438 GTAGGGTGTGCGTGTGTGT 60.227 57.895 0.00 0.00 0.00 3.72
630 696 0.812412 GTAGGGTGTGCGTGTGTGTT 60.812 55.000 0.00 0.00 0.00 3.32
631 697 0.531090 TAGGGTGTGCGTGTGTGTTC 60.531 55.000 0.00 0.00 0.00 3.18
632 698 2.109739 GGGTGTGCGTGTGTGTTCA 61.110 57.895 0.00 0.00 0.00 3.18
633 699 1.444119 GGGTGTGCGTGTGTGTTCAT 61.444 55.000 0.00 0.00 0.00 2.57
634 700 1.222300 GGTGTGCGTGTGTGTTCATA 58.778 50.000 0.00 0.00 0.00 2.15
635 701 1.194547 GGTGTGCGTGTGTGTTCATAG 59.805 52.381 0.00 0.00 0.00 2.23
636 702 1.194547 GTGTGCGTGTGTGTTCATAGG 59.805 52.381 0.00 0.00 0.00 2.57
637 703 1.069358 TGTGCGTGTGTGTTCATAGGA 59.931 47.619 0.00 0.00 0.00 2.94
638 704 2.139917 GTGCGTGTGTGTTCATAGGAA 58.860 47.619 0.00 0.00 0.00 3.36
639 705 2.742053 GTGCGTGTGTGTTCATAGGAAT 59.258 45.455 0.00 0.00 35.05 3.01
640 706 2.741517 TGCGTGTGTGTTCATAGGAATG 59.258 45.455 0.00 0.00 35.05 2.67
641 707 3.000041 GCGTGTGTGTTCATAGGAATGA 59.000 45.455 0.00 0.00 40.43 2.57
642 708 3.062639 GCGTGTGTGTTCATAGGAATGAG 59.937 47.826 0.00 0.00 42.97 2.90
643 709 4.245660 CGTGTGTGTTCATAGGAATGAGT 58.754 43.478 0.00 0.00 42.97 3.41
644 710 4.091945 CGTGTGTGTTCATAGGAATGAGTG 59.908 45.833 0.00 0.00 42.97 3.51
645 711 4.997395 GTGTGTGTTCATAGGAATGAGTGT 59.003 41.667 0.00 0.00 42.97 3.55
646 712 6.163476 GTGTGTGTTCATAGGAATGAGTGTA 58.837 40.000 0.00 0.00 42.97 2.90
647 713 6.818644 GTGTGTGTTCATAGGAATGAGTGTAT 59.181 38.462 0.00 0.00 42.97 2.29
648 714 6.818142 TGTGTGTTCATAGGAATGAGTGTATG 59.182 38.462 0.00 0.00 42.97 2.39
649 715 5.817296 TGTGTTCATAGGAATGAGTGTATGC 59.183 40.000 0.00 0.00 42.97 3.14
650 716 5.049828 TGTTCATAGGAATGAGTGTATGCG 58.950 41.667 0.00 0.00 42.97 4.73
651 717 3.653344 TCATAGGAATGAGTGTATGCGC 58.347 45.455 0.00 0.00 37.20 6.09
652 718 2.134201 TAGGAATGAGTGTATGCGCG 57.866 50.000 0.00 0.00 0.00 6.86
653 719 1.154205 AGGAATGAGTGTATGCGCGC 61.154 55.000 27.26 27.26 0.00 6.86
654 720 1.084037 GAATGAGTGTATGCGCGCG 60.084 57.895 28.44 28.44 0.00 6.86
655 721 1.752501 GAATGAGTGTATGCGCGCGT 61.753 55.000 32.35 30.61 0.00 6.01
656 722 0.526739 AATGAGTGTATGCGCGCGTA 60.527 50.000 32.35 28.18 0.00 4.42
657 723 0.318699 ATGAGTGTATGCGCGCGTAT 60.319 50.000 34.26 34.26 0.00 3.06
658 724 0.308376 TGAGTGTATGCGCGCGTATA 59.692 50.000 32.06 32.06 0.00 1.47
659 725 1.068816 TGAGTGTATGCGCGCGTATAT 60.069 47.619 36.33 24.35 0.00 0.86
660 726 1.317611 GAGTGTATGCGCGCGTATATG 59.682 52.381 36.33 8.63 0.00 1.78
661 727 1.068816 AGTGTATGCGCGCGTATATGA 60.069 47.619 36.33 25.28 0.00 2.15
662 728 1.317611 GTGTATGCGCGCGTATATGAG 59.682 52.381 36.33 7.09 0.00 2.90
663 729 1.068816 TGTATGCGCGCGTATATGAGT 60.069 47.619 36.33 18.02 0.00 3.41
664 730 1.317611 GTATGCGCGCGTATATGAGTG 59.682 52.381 36.33 5.56 0.00 3.51
665 731 1.617755 ATGCGCGCGTATATGAGTGC 61.618 55.000 31.72 22.60 44.05 4.40
666 732 2.016704 GCGCGCGTATATGAGTGCT 61.017 57.895 32.35 0.00 41.18 4.40
667 733 1.548973 GCGCGCGTATATGAGTGCTT 61.549 55.000 32.35 0.00 41.18 3.91
668 734 0.159554 CGCGCGTATATGAGTGCTTG 59.840 55.000 24.19 0.00 41.26 4.01
669 735 0.111089 GCGCGTATATGAGTGCTTGC 60.111 55.000 8.43 0.00 40.38 4.01
670 736 0.159554 CGCGTATATGAGTGCTTGCG 59.840 55.000 0.00 0.00 38.28 4.85
671 737 1.209128 GCGTATATGAGTGCTTGCGT 58.791 50.000 0.00 0.00 0.00 5.24
672 738 1.593006 GCGTATATGAGTGCTTGCGTT 59.407 47.619 0.00 0.00 0.00 4.84
673 739 2.030457 GCGTATATGAGTGCTTGCGTTT 59.970 45.455 0.00 0.00 0.00 3.60
674 740 3.597324 CGTATATGAGTGCTTGCGTTTG 58.403 45.455 0.00 0.00 0.00 2.93
675 741 3.062099 CGTATATGAGTGCTTGCGTTTGT 59.938 43.478 0.00 0.00 0.00 2.83
676 742 4.266739 CGTATATGAGTGCTTGCGTTTGTA 59.733 41.667 0.00 0.00 0.00 2.41
677 743 2.969443 ATGAGTGCTTGCGTTTGTAC 57.031 45.000 0.00 0.00 0.00 2.90
678 744 0.941542 TGAGTGCTTGCGTTTGTACC 59.058 50.000 0.00 0.00 0.00 3.34
679 745 0.110823 GAGTGCTTGCGTTTGTACCG 60.111 55.000 0.00 0.00 0.00 4.02
680 746 0.812412 AGTGCTTGCGTTTGTACCGT 60.812 50.000 0.00 0.00 0.00 4.83
681 747 0.656205 GTGCTTGCGTTTGTACCGTG 60.656 55.000 0.00 0.00 0.00 4.94
682 748 1.090625 TGCTTGCGTTTGTACCGTGT 61.091 50.000 0.00 0.00 0.00 4.49
683 749 0.028374 GCTTGCGTTTGTACCGTGTT 59.972 50.000 0.00 0.00 0.00 3.32
684 750 1.261089 GCTTGCGTTTGTACCGTGTTA 59.739 47.619 0.00 0.00 0.00 2.41
685 751 2.286301 GCTTGCGTTTGTACCGTGTTAA 60.286 45.455 0.00 0.00 0.00 2.01
686 752 3.788135 GCTTGCGTTTGTACCGTGTTAAA 60.788 43.478 0.00 0.00 0.00 1.52
687 753 4.341099 CTTGCGTTTGTACCGTGTTAAAA 58.659 39.130 0.00 0.00 0.00 1.52
688 754 4.346734 TGCGTTTGTACCGTGTTAAAAA 57.653 36.364 0.00 0.00 0.00 1.94
689 755 4.341099 TGCGTTTGTACCGTGTTAAAAAG 58.659 39.130 0.00 0.00 0.00 2.27
718 784 3.569701 TGCAGCCTTGGTTCTTTTCTAAG 59.430 43.478 0.00 0.00 0.00 2.18
719 785 3.057245 GCAGCCTTGGTTCTTTTCTAAGG 60.057 47.826 0.00 0.00 43.35 2.69
720 786 3.507622 CAGCCTTGGTTCTTTTCTAAGGG 59.492 47.826 9.40 0.00 41.66 3.95
721 787 2.826128 GCCTTGGTTCTTTTCTAAGGGG 59.174 50.000 9.40 0.00 41.66 4.79
722 788 3.431415 CCTTGGTTCTTTTCTAAGGGGG 58.569 50.000 0.00 0.00 39.03 5.40
723 789 3.181422 CCTTGGTTCTTTTCTAAGGGGGT 60.181 47.826 0.00 0.00 39.03 4.95
724 790 3.518992 TGGTTCTTTTCTAAGGGGGTG 57.481 47.619 0.00 0.00 32.02 4.61
725 791 2.787035 TGGTTCTTTTCTAAGGGGGTGT 59.213 45.455 0.00 0.00 32.02 4.16
726 792 3.205733 TGGTTCTTTTCTAAGGGGGTGTT 59.794 43.478 0.00 0.00 32.02 3.32
727 793 4.220724 GGTTCTTTTCTAAGGGGGTGTTT 58.779 43.478 0.00 0.00 32.02 2.83
728 794 4.038763 GGTTCTTTTCTAAGGGGGTGTTTG 59.961 45.833 0.00 0.00 32.02 2.93
729 795 3.839778 TCTTTTCTAAGGGGGTGTTTGG 58.160 45.455 0.00 0.00 32.02 3.28
730 796 3.205733 TCTTTTCTAAGGGGGTGTTTGGT 59.794 43.478 0.00 0.00 32.02 3.67
731 797 3.691698 TTTCTAAGGGGGTGTTTGGTT 57.308 42.857 0.00 0.00 0.00 3.67
732 798 3.691698 TTCTAAGGGGGTGTTTGGTTT 57.308 42.857 0.00 0.00 0.00 3.27
733 799 3.232720 TCTAAGGGGGTGTTTGGTTTC 57.767 47.619 0.00 0.00 0.00 2.78
734 800 2.514582 TCTAAGGGGGTGTTTGGTTTCA 59.485 45.455 0.00 0.00 0.00 2.69
735 801 1.788229 AAGGGGGTGTTTGGTTTCAG 58.212 50.000 0.00 0.00 0.00 3.02
736 802 0.105709 AGGGGGTGTTTGGTTTCAGG 60.106 55.000 0.00 0.00 0.00 3.86
737 803 1.118965 GGGGGTGTTTGGTTTCAGGG 61.119 60.000 0.00 0.00 0.00 4.45
738 804 0.105913 GGGGTGTTTGGTTTCAGGGA 60.106 55.000 0.00 0.00 0.00 4.20
739 805 1.037493 GGGTGTTTGGTTTCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
740 806 1.411074 GGGTGTTTGGTTTCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
741 807 2.384828 GGTGTTTGGTTTCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
742 808 2.764010 GGTGTTTGGTTTCAGGGACTTT 59.236 45.455 0.00 0.00 34.60 2.66
743 809 3.196901 GGTGTTTGGTTTCAGGGACTTTT 59.803 43.478 0.00 0.00 34.60 2.27
744 810 4.323180 GGTGTTTGGTTTCAGGGACTTTTT 60.323 41.667 0.00 0.00 34.60 1.94
745 811 5.105269 GGTGTTTGGTTTCAGGGACTTTTTA 60.105 40.000 0.00 0.00 34.60 1.52
746 812 6.040247 GTGTTTGGTTTCAGGGACTTTTTAG 58.960 40.000 0.00 0.00 34.60 1.85
747 813 5.717654 TGTTTGGTTTCAGGGACTTTTTAGT 59.282 36.000 0.00 0.00 34.60 2.24
748 814 6.211785 TGTTTGGTTTCAGGGACTTTTTAGTT 59.788 34.615 0.00 0.00 34.60 2.24
749 815 6.860790 TTGGTTTCAGGGACTTTTTAGTTT 57.139 33.333 0.00 0.00 34.60 2.66
750 816 6.459670 TGGTTTCAGGGACTTTTTAGTTTC 57.540 37.500 0.00 0.00 34.60 2.78
751 817 5.952947 TGGTTTCAGGGACTTTTTAGTTTCA 59.047 36.000 0.00 0.00 34.60 2.69
752 818 6.096282 TGGTTTCAGGGACTTTTTAGTTTCAG 59.904 38.462 0.00 0.00 34.60 3.02
753 819 6.320418 GGTTTCAGGGACTTTTTAGTTTCAGA 59.680 38.462 0.00 0.00 34.60 3.27
754 820 7.418408 GTTTCAGGGACTTTTTAGTTTCAGAG 58.582 38.462 0.00 0.00 34.60 3.35
755 821 6.494666 TCAGGGACTTTTTAGTTTCAGAGA 57.505 37.500 0.00 0.00 34.60 3.10
756 822 6.289064 TCAGGGACTTTTTAGTTTCAGAGAC 58.711 40.000 0.00 0.00 34.60 3.36
757 823 6.099845 TCAGGGACTTTTTAGTTTCAGAGACT 59.900 38.462 0.00 0.00 34.60 3.24
758 824 7.289317 TCAGGGACTTTTTAGTTTCAGAGACTA 59.711 37.037 0.00 0.00 34.60 2.59
759 825 7.600752 CAGGGACTTTTTAGTTTCAGAGACTAG 59.399 40.741 1.31 0.00 34.60 2.57
760 826 7.509659 AGGGACTTTTTAGTTTCAGAGACTAGA 59.490 37.037 0.00 0.00 27.25 2.43
761 827 8.148999 GGGACTTTTTAGTTTCAGAGACTAGAA 58.851 37.037 0.00 1.19 31.74 2.10
762 828 9.543783 GGACTTTTTAGTTTCAGAGACTAGAAA 57.456 33.333 13.31 13.31 34.50 2.52
780 846 8.905660 ACTAGAAAAAGTCTCTAAAAAGTCCC 57.094 34.615 0.00 0.00 37.84 4.46
781 847 8.715842 ACTAGAAAAAGTCTCTAAAAAGTCCCT 58.284 33.333 0.00 0.00 37.84 4.20
782 848 7.809546 AGAAAAAGTCTCTAAAAAGTCCCTG 57.190 36.000 0.00 0.00 0.00 4.45
783 849 6.773200 AGAAAAAGTCTCTAAAAAGTCCCTGG 59.227 38.462 0.00 0.00 0.00 4.45
784 850 4.642466 AAGTCTCTAAAAAGTCCCTGGG 57.358 45.455 6.33 6.33 0.00 4.45
785 851 3.870559 AGTCTCTAAAAAGTCCCTGGGA 58.129 45.455 12.53 12.53 0.00 4.37
786 852 4.240323 AGTCTCTAAAAAGTCCCTGGGAA 58.760 43.478 19.06 0.00 31.38 3.97
787 853 4.852697 AGTCTCTAAAAAGTCCCTGGGAAT 59.147 41.667 19.06 14.75 31.38 3.01
788 854 5.045505 AGTCTCTAAAAAGTCCCTGGGAATC 60.046 44.000 19.06 6.07 31.38 2.52
789 855 4.849810 TCTCTAAAAAGTCCCTGGGAATCA 59.150 41.667 19.06 1.87 31.38 2.57
790 856 5.312178 TCTCTAAAAAGTCCCTGGGAATCAA 59.688 40.000 19.06 1.88 31.38 2.57
791 857 5.959512 TCTAAAAAGTCCCTGGGAATCAAA 58.040 37.500 19.06 2.24 31.38 2.69
792 858 6.561294 TCTAAAAAGTCCCTGGGAATCAAAT 58.439 36.000 19.06 6.49 31.38 2.32
793 859 5.488262 AAAAAGTCCCTGGGAATCAAATG 57.512 39.130 19.06 0.00 31.38 2.32
794 860 2.834638 AGTCCCTGGGAATCAAATGG 57.165 50.000 19.06 0.00 31.38 3.16
795 861 1.288932 AGTCCCTGGGAATCAAATGGG 59.711 52.381 19.06 0.00 31.38 4.00
796 862 1.287739 GTCCCTGGGAATCAAATGGGA 59.712 52.381 19.06 0.00 40.99 4.37
797 863 1.570501 TCCCTGGGAATCAAATGGGAG 59.429 52.381 14.48 0.00 38.67 4.30
798 864 1.412074 CCCTGGGAATCAAATGGGAGG 60.412 57.143 7.01 0.00 36.90 4.30
799 865 1.412074 CCTGGGAATCAAATGGGAGGG 60.412 57.143 0.00 0.00 0.00 4.30
800 866 1.570501 CTGGGAATCAAATGGGAGGGA 59.429 52.381 0.00 0.00 0.00 4.20
801 867 1.287739 TGGGAATCAAATGGGAGGGAC 59.712 52.381 0.00 0.00 0.00 4.46
803 869 2.023984 GGGAATCAAATGGGAGGGACTT 60.024 50.000 0.00 0.00 41.55 3.01
804 870 3.566553 GGGAATCAAATGGGAGGGACTTT 60.567 47.826 0.00 0.00 41.55 2.66
805 871 4.096681 GGAATCAAATGGGAGGGACTTTT 58.903 43.478 0.00 0.00 41.55 2.27
806 872 4.532126 GGAATCAAATGGGAGGGACTTTTT 59.468 41.667 0.00 0.00 41.55 1.94
807 873 5.337571 GGAATCAAATGGGAGGGACTTTTTC 60.338 44.000 0.00 0.00 41.55 2.29
808 874 4.469469 TCAAATGGGAGGGACTTTTTCT 57.531 40.909 0.00 0.00 41.55 2.52
809 875 5.592587 TCAAATGGGAGGGACTTTTTCTA 57.407 39.130 0.00 0.00 41.55 2.10
810 876 5.321927 TCAAATGGGAGGGACTTTTTCTAC 58.678 41.667 0.00 0.00 41.55 2.59
811 877 4.317530 AATGGGAGGGACTTTTTCTACC 57.682 45.455 0.00 0.00 41.55 3.18
812 878 1.626825 TGGGAGGGACTTTTTCTACCG 59.373 52.381 0.00 0.00 41.55 4.02
813 879 1.065636 GGGAGGGACTTTTTCTACCGG 60.066 57.143 0.00 0.00 41.55 5.28
814 880 1.065636 GGAGGGACTTTTTCTACCGGG 60.066 57.143 6.32 0.00 41.55 5.73
815 881 1.904537 GAGGGACTTTTTCTACCGGGA 59.095 52.381 6.32 0.00 41.55 5.14
816 882 1.627329 AGGGACTTTTTCTACCGGGAC 59.373 52.381 6.32 0.00 27.25 4.46
817 883 1.627329 GGGACTTTTTCTACCGGGACT 59.373 52.381 6.32 0.00 0.00 3.85
818 884 2.833943 GGGACTTTTTCTACCGGGACTA 59.166 50.000 6.32 0.00 0.00 2.59
819 885 3.118847 GGGACTTTTTCTACCGGGACTAG 60.119 52.174 6.32 0.00 0.00 2.57
820 886 3.766051 GGACTTTTTCTACCGGGACTAGA 59.234 47.826 6.32 0.41 0.00 2.43
821 887 4.221482 GGACTTTTTCTACCGGGACTAGAA 59.779 45.833 6.32 7.71 0.00 2.10
822 888 5.279657 GGACTTTTTCTACCGGGACTAGAAA 60.280 44.000 17.40 17.40 38.08 2.52
823 889 6.178607 ACTTTTTCTACCGGGACTAGAAAA 57.821 37.500 24.11 24.11 43.60 2.29
826 892 6.423776 TTTTCTACCGGGACTAGAAAAAGA 57.576 37.500 25.03 11.54 42.90 2.52
827 893 5.397142 TTCTACCGGGACTAGAAAAAGAC 57.603 43.478 6.32 0.00 29.10 3.01
828 894 4.670765 TCTACCGGGACTAGAAAAAGACT 58.329 43.478 6.32 0.00 0.00 3.24
829 895 3.957591 ACCGGGACTAGAAAAAGACTC 57.042 47.619 6.32 0.00 0.00 3.36
830 896 3.508426 ACCGGGACTAGAAAAAGACTCT 58.492 45.455 6.32 0.00 0.00 3.24
831 897 4.670765 ACCGGGACTAGAAAAAGACTCTA 58.329 43.478 6.32 0.00 0.00 2.43
832 898 4.462132 ACCGGGACTAGAAAAAGACTCTAC 59.538 45.833 6.32 0.00 0.00 2.59
833 899 4.705991 CCGGGACTAGAAAAAGACTCTACT 59.294 45.833 0.00 0.00 0.00 2.57
834 900 5.393243 CCGGGACTAGAAAAAGACTCTACTG 60.393 48.000 0.00 0.00 0.00 2.74
835 901 5.415077 CGGGACTAGAAAAAGACTCTACTGA 59.585 44.000 0.00 0.00 0.00 3.41
836 902 6.072064 CGGGACTAGAAAAAGACTCTACTGAA 60.072 42.308 0.00 0.00 0.00 3.02
837 903 7.317390 GGGACTAGAAAAAGACTCTACTGAAG 58.683 42.308 0.00 0.00 0.00 3.02
838 904 7.177041 GGGACTAGAAAAAGACTCTACTGAAGA 59.823 40.741 0.00 0.00 0.00 2.87
896 962 6.445357 GTCCTAAGACTTTTGAACCAAACA 57.555 37.500 0.00 0.00 40.10 2.83
897 963 6.263344 GTCCTAAGACTTTTGAACCAAACAC 58.737 40.000 0.00 0.00 40.10 3.32
898 964 5.358725 TCCTAAGACTTTTGAACCAAACACC 59.641 40.000 0.00 0.00 32.79 4.16
899 965 4.465632 AAGACTTTTGAACCAAACACCC 57.534 40.909 0.00 0.00 32.79 4.61
900 966 2.764010 AGACTTTTGAACCAAACACCCC 59.236 45.455 0.00 0.00 32.79 4.95
901 967 2.764010 GACTTTTGAACCAAACACCCCT 59.236 45.455 0.00 0.00 32.79 4.79
902 968 3.955551 GACTTTTGAACCAAACACCCCTA 59.044 43.478 0.00 0.00 32.79 3.53
903 969 4.354662 ACTTTTGAACCAAACACCCCTAA 58.645 39.130 0.00 0.00 32.79 2.69
904 970 4.404394 ACTTTTGAACCAAACACCCCTAAG 59.596 41.667 0.00 0.00 32.79 2.18
991 1061 4.621034 GGCAAACACAATTGTATTTCTCCG 59.379 41.667 11.82 2.85 33.55 4.63
1050 1120 3.737172 GCGCTGGCCGTGTTTCAT 61.737 61.111 0.00 0.00 39.71 2.57
1124 1194 3.760035 GCTCTTCCTCGCACCCGA 61.760 66.667 0.00 0.00 42.01 5.14
1166 1236 4.719369 ACCGCCAGTCGAGAACGC 62.719 66.667 0.00 0.00 41.67 4.84
1276 1346 1.492599 TCTTCCATGTCACCAACCACA 59.507 47.619 0.00 0.00 0.00 4.17
1413 1483 2.045132 ACCATCCCCATCCAGCCT 59.955 61.111 0.00 0.00 0.00 4.58
1416 1486 2.045132 ATCCCCATCCAGCCTGGT 59.955 61.111 11.27 0.00 39.03 4.00
1421 1491 1.474330 CCCATCCAGCCTGGTAAAAC 58.526 55.000 11.27 0.00 39.03 2.43
1425 1495 1.742308 TCCAGCCTGGTAAAACCTCT 58.258 50.000 11.27 0.00 39.58 3.69
1431 1501 1.302993 TGGTAAAACCTCTGCCGGC 60.303 57.895 22.73 22.73 39.58 6.13
1433 1503 2.046700 TAAAACCTCTGCCGGCCG 60.047 61.111 26.77 21.04 0.00 6.13
1435 1505 2.400269 TAAAACCTCTGCCGGCCGTT 62.400 55.000 26.77 17.54 0.00 4.44
1440 1510 3.901797 CTCTGCCGGCCGTTTCCTT 62.902 63.158 26.77 0.00 0.00 3.36
1547 1617 1.719600 CTCAAGTACCAGCTGCTCAC 58.280 55.000 8.66 5.32 0.00 3.51
1722 1792 3.953775 CACACGGACCCCAGCCTT 61.954 66.667 0.00 0.00 0.00 4.35
1852 1922 0.588730 CGTGTTCAAGGTGCGTTGTG 60.589 55.000 4.83 0.00 0.00 3.33
1866 1936 1.071987 TTGTGCCTCCAGCTCTGTG 59.928 57.895 0.00 0.00 44.23 3.66
1869 1939 1.614525 TGCCTCCAGCTCTGTGGAT 60.615 57.895 5.30 0.00 45.87 3.41
1895 1965 3.115390 ACTGCTACCAATCTACCACCAT 58.885 45.455 0.00 0.00 0.00 3.55
1982 2052 1.625818 ACAGGGTGGTGATCAAGTCTC 59.374 52.381 0.00 0.00 0.00 3.36
2026 2096 3.347216 TGCACTCTTCTTTAATCCTGCC 58.653 45.455 0.00 0.00 0.00 4.85
2050 2120 1.087501 GCCAGGAATCCGACTTGTTC 58.912 55.000 0.00 0.00 0.00 3.18
2123 2193 0.792640 CACCGTCACAGAGTTCATGC 59.207 55.000 0.00 0.00 0.00 4.06
2195 2265 7.504574 TCAGGATTGCACATGAATAATCAGATT 59.495 33.333 0.00 0.20 39.39 2.40
2196 2266 7.595130 CAGGATTGCACATGAATAATCAGATTG 59.405 37.037 5.85 0.00 39.39 2.67
2228 2298 2.438868 CGGACTATCGCCATTGATGA 57.561 50.000 0.00 0.00 0.00 2.92
2230 2300 2.669924 CGGACTATCGCCATTGATGATG 59.330 50.000 0.00 0.00 35.42 3.07
2232 2302 4.618227 CGGACTATCGCCATTGATGATGTA 60.618 45.833 0.00 0.00 33.71 2.29
2233 2303 4.867047 GGACTATCGCCATTGATGATGTAG 59.133 45.833 0.00 0.00 33.71 2.74
2234 2304 5.336770 GGACTATCGCCATTGATGATGTAGA 60.337 44.000 0.00 0.00 33.71 2.59
2235 2305 6.291648 ACTATCGCCATTGATGATGTAGAT 57.708 37.500 0.00 0.00 35.52 1.98
2236 2306 6.104665 ACTATCGCCATTGATGATGTAGATG 58.895 40.000 0.00 0.00 34.21 2.90
2237 2307 3.069289 TCGCCATTGATGATGTAGATGC 58.931 45.455 0.00 0.00 33.71 3.91
2238 2308 2.809696 CGCCATTGATGATGTAGATGCA 59.190 45.455 0.00 0.00 33.71 3.96
2239 2309 3.251487 CGCCATTGATGATGTAGATGCAA 59.749 43.478 0.00 0.00 33.71 4.08
2240 2310 4.612939 CGCCATTGATGATGTAGATGCAAG 60.613 45.833 0.00 0.00 33.71 4.01
2241 2311 4.795268 CCATTGATGATGTAGATGCAAGC 58.205 43.478 0.00 0.00 33.71 4.01
2242 2312 4.277423 CCATTGATGATGTAGATGCAAGCA 59.723 41.667 0.00 0.00 33.71 3.91
2243 2313 5.048013 CCATTGATGATGTAGATGCAAGCAT 60.048 40.000 7.35 7.35 35.17 3.79
2244 2314 5.432885 TTGATGATGTAGATGCAAGCATG 57.567 39.130 12.94 0.00 36.70 4.06
2256 2326 1.904144 CAAGCATGCATGTTTCTCCG 58.096 50.000 23.96 10.76 0.00 4.63
2388 2468 1.464734 TTGAGCTCGGGACTAGAGTG 58.535 55.000 9.64 0.00 37.99 3.51
2439 2519 8.248253 ACTTGACATCTACATGTAAACGATACA 58.752 33.333 7.06 7.96 43.79 2.29
2491 2571 2.023673 TCTGTCTGCAAAACCAAGGTG 58.976 47.619 0.00 0.00 0.00 4.00
2494 2574 0.260230 TCTGCAAAACCAAGGTGGGA 59.740 50.000 0.00 0.00 43.37 4.37
2617 2697 4.711949 AGCACCTTGGCAGCCTCG 62.712 66.667 14.15 3.09 35.83 4.63
2638 2718 2.941720 GAGAACATCCTGAACCTGCATC 59.058 50.000 0.00 0.00 0.00 3.91
2706 2788 3.181464 GGAACAAGCATAGGTAGGGAGAC 60.181 52.174 0.00 0.00 0.00 3.36
2717 2799 4.175962 AGGTAGGGAGACAATTTCCTTGA 58.824 43.478 0.00 0.00 38.29 3.02
2752 2837 7.343574 TGGTTCACTTAATACTACTAGGCATGA 59.656 37.037 0.00 0.00 0.00 3.07
2762 2847 5.731591 ACTACTAGGCATGACTGTTTAACC 58.268 41.667 12.69 0.00 0.00 2.85
2800 2885 7.246171 TCTGGGGATTTAACTATCATCTAGC 57.754 40.000 0.00 0.00 0.00 3.42
2801 2886 6.787458 TCTGGGGATTTAACTATCATCTAGCA 59.213 38.462 0.00 0.00 0.00 3.49
2842 2927 5.858475 AGAAAAATTGTCGCAGTAAGATCG 58.142 37.500 0.00 0.00 0.00 3.69
2846 2931 6.422776 AAATTGTCGCAGTAAGATCGAAAT 57.577 33.333 0.00 0.00 33.81 2.17
3004 3092 3.385111 AGTTCTCAACTTCCTTGACGAGT 59.615 43.478 0.00 0.00 39.04 4.18
3024 3112 1.545841 TGGTCTGTCGAGTACTGCAT 58.454 50.000 0.00 0.00 0.00 3.96
3062 3153 2.295909 TGCAGGATAAAAAGTGTGTGGC 59.704 45.455 0.00 0.00 0.00 5.01
3063 3154 2.558359 GCAGGATAAAAAGTGTGTGGCT 59.442 45.455 0.00 0.00 0.00 4.75
3064 3155 3.756434 GCAGGATAAAAAGTGTGTGGCTA 59.244 43.478 0.00 0.00 0.00 3.93
3065 3156 4.399303 GCAGGATAAAAAGTGTGTGGCTAT 59.601 41.667 0.00 0.00 0.00 2.97
3066 3157 5.588648 GCAGGATAAAAAGTGTGTGGCTATA 59.411 40.000 0.00 0.00 0.00 1.31
3067 3158 6.238484 GCAGGATAAAAAGTGTGTGGCTATAG 60.238 42.308 0.00 0.00 0.00 1.31
3069 3160 7.552687 CAGGATAAAAAGTGTGTGGCTATAGAA 59.447 37.037 3.21 0.00 0.00 2.10
3070 3161 8.107095 AGGATAAAAAGTGTGTGGCTATAGAAA 58.893 33.333 3.21 0.00 0.00 2.52
3071 3162 8.903820 GGATAAAAAGTGTGTGGCTATAGAAAT 58.096 33.333 3.21 0.00 0.00 2.17
3083 3174 7.552687 TGTGGCTATAGAAATGTCAAAAGTAGG 59.447 37.037 3.21 0.00 0.00 3.18
3142 3233 9.941325 ATCATGTTATTTACCTGCAAATTTTCA 57.059 25.926 0.00 0.00 30.84 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.970324 GGCGACGACCAGCAACAA 60.970 61.111 0.00 0.00 34.54 2.83
67 68 4.610605 TCACCGAAGTTCTTCAATGGTA 57.389 40.909 12.15 0.86 0.00 3.25
82 83 2.589540 GGTGCATGGGATCACCGA 59.410 61.111 4.71 0.00 42.67 4.69
93 94 2.316586 CCTTAGGGGTGGGGTGCAT 61.317 63.158 0.00 0.00 0.00 3.96
150 151 4.880120 TCTTAGAAGAAGCCATTGCATCAG 59.120 41.667 0.00 0.00 37.67 2.90
154 155 6.239217 TCTATCTTAGAAGAAGCCATTGCA 57.761 37.500 0.00 0.00 38.77 4.08
162 163 6.239458 GGACCCACCATCTATCTTAGAAGAAG 60.239 46.154 0.00 0.00 38.50 2.85
179 180 3.316573 CTGAAGAGGCGGACCCACC 62.317 68.421 0.00 0.00 36.11 4.61
184 185 1.205893 AGTTCATCTGAAGAGGCGGAC 59.794 52.381 0.00 0.00 34.27 4.79
185 186 1.561643 AGTTCATCTGAAGAGGCGGA 58.438 50.000 0.00 0.00 34.27 5.54
187 188 4.377839 TTCTAGTTCATCTGAAGAGGCG 57.622 45.455 0.00 0.00 34.27 5.52
196 197 5.869579 TCAGCCACTTTTTCTAGTTCATCT 58.130 37.500 0.00 0.00 0.00 2.90
221 222 0.881118 TGCCTGGAAATTGTCTTCGC 59.119 50.000 0.00 0.00 0.00 4.70
242 243 9.862371 ATAAAGAACGGTTATGCTATATCTCAG 57.138 33.333 0.00 0.00 0.00 3.35
312 313 9.935682 ACTATTGACTCAACATATAAATTTGCG 57.064 29.630 0.00 0.00 0.00 4.85
342 343 9.628500 GGTTCCAATATAATTCAAGTTCTAGGT 57.372 33.333 0.00 0.00 0.00 3.08
343 344 8.774586 CGGTTCCAATATAATTCAAGTTCTAGG 58.225 37.037 0.00 0.00 0.00 3.02
344 345 9.542462 TCGGTTCCAATATAATTCAAGTTCTAG 57.458 33.333 0.00 0.00 0.00 2.43
345 346 9.542462 CTCGGTTCCAATATAATTCAAGTTCTA 57.458 33.333 0.00 0.00 0.00 2.10
346 347 8.265055 TCTCGGTTCCAATATAATTCAAGTTCT 58.735 33.333 0.00 0.00 0.00 3.01
347 348 8.433421 TCTCGGTTCCAATATAATTCAAGTTC 57.567 34.615 0.00 0.00 0.00 3.01
349 350 7.792032 TCTCTCGGTTCCAATATAATTCAAGT 58.208 34.615 0.00 0.00 0.00 3.16
350 351 7.928706 ACTCTCTCGGTTCCAATATAATTCAAG 59.071 37.037 0.00 0.00 0.00 3.02
351 352 7.792032 ACTCTCTCGGTTCCAATATAATTCAA 58.208 34.615 0.00 0.00 0.00 2.69
352 353 7.361457 ACTCTCTCGGTTCCAATATAATTCA 57.639 36.000 0.00 0.00 0.00 2.57
353 354 9.194271 GTTACTCTCTCGGTTCCAATATAATTC 57.806 37.037 0.00 0.00 0.00 2.17
354 355 8.925338 AGTTACTCTCTCGGTTCCAATATAATT 58.075 33.333 0.00 0.00 0.00 1.40
356 357 7.893124 AGTTACTCTCTCGGTTCCAATATAA 57.107 36.000 0.00 0.00 0.00 0.98
357 358 8.985315 TTAGTTACTCTCTCGGTTCCAATATA 57.015 34.615 0.00 0.00 0.00 0.86
360 361 6.574350 CATTAGTTACTCTCTCGGTTCCAAT 58.426 40.000 0.00 0.00 0.00 3.16
361 362 5.623824 GCATTAGTTACTCTCTCGGTTCCAA 60.624 44.000 0.00 0.00 0.00 3.53
363 364 4.142227 TGCATTAGTTACTCTCTCGGTTCC 60.142 45.833 0.00 0.00 0.00 3.62
364 365 4.995124 TGCATTAGTTACTCTCTCGGTTC 58.005 43.478 0.00 0.00 0.00 3.62
384 450 2.050077 GTTGGTTCGCAAGGCTGC 60.050 61.111 0.00 0.00 45.75 5.25
385 451 0.318107 CAAGTTGGTTCGCAAGGCTG 60.318 55.000 0.00 0.00 38.47 4.85
386 452 0.751643 ACAAGTTGGTTCGCAAGGCT 60.752 50.000 7.96 0.00 38.47 4.58
387 453 0.594796 CACAAGTTGGTTCGCAAGGC 60.595 55.000 7.96 0.00 38.47 4.35
388 454 0.030638 CCACAAGTTGGTTCGCAAGG 59.969 55.000 7.96 0.00 41.10 3.61
389 455 3.549997 CCACAAGTTGGTTCGCAAG 57.450 52.632 7.96 0.00 41.10 4.01
399 465 4.827284 CCTCTAACCATTCAACCACAAGTT 59.173 41.667 0.00 0.00 40.16 2.66
400 466 4.398319 CCTCTAACCATTCAACCACAAGT 58.602 43.478 0.00 0.00 0.00 3.16
401 467 3.758554 CCCTCTAACCATTCAACCACAAG 59.241 47.826 0.00 0.00 0.00 3.16
402 468 3.396276 TCCCTCTAACCATTCAACCACAA 59.604 43.478 0.00 0.00 0.00 3.33
403 469 2.983192 TCCCTCTAACCATTCAACCACA 59.017 45.455 0.00 0.00 0.00 4.17
404 470 3.009143 AGTCCCTCTAACCATTCAACCAC 59.991 47.826 0.00 0.00 0.00 4.16
405 471 3.256704 AGTCCCTCTAACCATTCAACCA 58.743 45.455 0.00 0.00 0.00 3.67
406 472 5.368989 CATAGTCCCTCTAACCATTCAACC 58.631 45.833 0.00 0.00 31.94 3.77
407 473 5.104485 ACCATAGTCCCTCTAACCATTCAAC 60.104 44.000 0.00 0.00 31.94 3.18
408 474 5.036916 ACCATAGTCCCTCTAACCATTCAA 58.963 41.667 0.00 0.00 31.94 2.69
409 475 4.631234 ACCATAGTCCCTCTAACCATTCA 58.369 43.478 0.00 0.00 31.94 2.57
410 476 6.070710 GGATACCATAGTCCCTCTAACCATTC 60.071 46.154 0.00 0.00 31.94 2.67
411 477 5.785940 GGATACCATAGTCCCTCTAACCATT 59.214 44.000 0.00 0.00 31.94 3.16
412 478 5.342866 GGATACCATAGTCCCTCTAACCAT 58.657 45.833 0.00 0.00 31.94 3.55
413 479 4.748701 GGATACCATAGTCCCTCTAACCA 58.251 47.826 0.00 0.00 31.94 3.67
440 506 1.895131 CCAGAATTTGAACCCTGGTGG 59.105 52.381 0.00 0.00 40.84 4.61
444 510 2.229784 GAGCACCAGAATTTGAACCCTG 59.770 50.000 0.00 0.00 0.00 4.45
445 511 2.519013 GAGCACCAGAATTTGAACCCT 58.481 47.619 0.00 0.00 0.00 4.34
446 512 1.200020 CGAGCACCAGAATTTGAACCC 59.800 52.381 0.00 0.00 0.00 4.11
447 513 1.880027 ACGAGCACCAGAATTTGAACC 59.120 47.619 0.00 0.00 0.00 3.62
448 514 4.946784 ATACGAGCACCAGAATTTGAAC 57.053 40.909 0.00 0.00 0.00 3.18
449 515 5.957842 AAATACGAGCACCAGAATTTGAA 57.042 34.783 0.00 0.00 0.00 2.69
450 516 7.201696 GGAATAAATACGAGCACCAGAATTTGA 60.202 37.037 0.00 0.00 0.00 2.69
451 517 6.912591 GGAATAAATACGAGCACCAGAATTTG 59.087 38.462 0.00 0.00 0.00 2.32
452 518 6.828785 AGGAATAAATACGAGCACCAGAATTT 59.171 34.615 0.00 0.00 0.00 1.82
453 519 6.260936 CAGGAATAAATACGAGCACCAGAATT 59.739 38.462 0.00 0.00 0.00 2.17
454 520 5.760253 CAGGAATAAATACGAGCACCAGAAT 59.240 40.000 0.00 0.00 0.00 2.40
455 521 5.105106 TCAGGAATAAATACGAGCACCAGAA 60.105 40.000 0.00 0.00 0.00 3.02
456 522 4.404394 TCAGGAATAAATACGAGCACCAGA 59.596 41.667 0.00 0.00 0.00 3.86
457 523 4.693283 TCAGGAATAAATACGAGCACCAG 58.307 43.478 0.00 0.00 0.00 4.00
458 524 4.746535 TCAGGAATAAATACGAGCACCA 57.253 40.909 0.00 0.00 0.00 4.17
459 525 6.619801 AATTCAGGAATAAATACGAGCACC 57.380 37.500 0.00 0.00 0.00 5.01
480 546 9.865321 CACATCAACAGAAATCCTGAAATAAAT 57.135 29.630 0.00 0.00 45.78 1.40
481 547 7.814107 GCACATCAACAGAAATCCTGAAATAAA 59.186 33.333 0.00 0.00 45.78 1.40
482 548 7.039853 TGCACATCAACAGAAATCCTGAAATAA 60.040 33.333 0.00 0.00 45.78 1.40
483 549 6.433716 TGCACATCAACAGAAATCCTGAAATA 59.566 34.615 0.00 0.00 45.78 1.40
484 550 5.244402 TGCACATCAACAGAAATCCTGAAAT 59.756 36.000 0.00 0.00 45.78 2.17
485 551 4.583907 TGCACATCAACAGAAATCCTGAAA 59.416 37.500 0.00 0.00 45.78 2.69
486 552 4.143543 TGCACATCAACAGAAATCCTGAA 58.856 39.130 0.00 0.00 45.78 3.02
487 553 3.753815 TGCACATCAACAGAAATCCTGA 58.246 40.909 0.00 0.00 45.78 3.86
489 555 5.733620 AAATGCACATCAACAGAAATCCT 57.266 34.783 0.00 0.00 0.00 3.24
490 556 6.529125 CACTAAATGCACATCAACAGAAATCC 59.471 38.462 0.00 0.00 0.00 3.01
491 557 6.529125 CCACTAAATGCACATCAACAGAAATC 59.471 38.462 0.00 0.00 0.00 2.17
492 558 6.392354 CCACTAAATGCACATCAACAGAAAT 58.608 36.000 0.00 0.00 0.00 2.17
493 559 5.278907 CCCACTAAATGCACATCAACAGAAA 60.279 40.000 0.00 0.00 0.00 2.52
494 560 4.218200 CCCACTAAATGCACATCAACAGAA 59.782 41.667 0.00 0.00 0.00 3.02
495 561 3.758023 CCCACTAAATGCACATCAACAGA 59.242 43.478 0.00 0.00 0.00 3.41
496 562 3.758023 TCCCACTAAATGCACATCAACAG 59.242 43.478 0.00 0.00 0.00 3.16
497 563 3.758023 CTCCCACTAAATGCACATCAACA 59.242 43.478 0.00 0.00 0.00 3.33
498 564 3.129287 CCTCCCACTAAATGCACATCAAC 59.871 47.826 0.00 0.00 0.00 3.18
499 565 3.010027 TCCTCCCACTAAATGCACATCAA 59.990 43.478 0.00 0.00 0.00 2.57
500 566 2.575735 TCCTCCCACTAAATGCACATCA 59.424 45.455 0.00 0.00 0.00 3.07
501 567 3.118261 TCTCCTCCCACTAAATGCACATC 60.118 47.826 0.00 0.00 0.00 3.06
502 568 2.846206 TCTCCTCCCACTAAATGCACAT 59.154 45.455 0.00 0.00 0.00 3.21
503 569 2.027192 GTCTCCTCCCACTAAATGCACA 60.027 50.000 0.00 0.00 0.00 4.57
504 570 2.633488 GTCTCCTCCCACTAAATGCAC 58.367 52.381 0.00 0.00 0.00 4.57
505 571 1.207089 CGTCTCCTCCCACTAAATGCA 59.793 52.381 0.00 0.00 0.00 3.96
506 572 1.207329 ACGTCTCCTCCCACTAAATGC 59.793 52.381 0.00 0.00 0.00 3.56
507 573 3.262420 CAACGTCTCCTCCCACTAAATG 58.738 50.000 0.00 0.00 0.00 2.32
508 574 2.904434 ACAACGTCTCCTCCCACTAAAT 59.096 45.455 0.00 0.00 0.00 1.40
509 575 2.298163 GACAACGTCTCCTCCCACTAAA 59.702 50.000 0.00 0.00 0.00 1.85
510 576 1.891150 GACAACGTCTCCTCCCACTAA 59.109 52.381 0.00 0.00 0.00 2.24
511 577 1.542492 GACAACGTCTCCTCCCACTA 58.458 55.000 0.00 0.00 0.00 2.74
512 578 1.524863 CGACAACGTCTCCTCCCACT 61.525 60.000 0.00 0.00 34.56 4.00
513 579 1.080705 CGACAACGTCTCCTCCCAC 60.081 63.158 0.00 0.00 34.56 4.61
514 580 3.362262 CGACAACGTCTCCTCCCA 58.638 61.111 0.00 0.00 34.56 4.37
530 596 2.913777 TAGACACCTCATCGTTGACG 57.086 50.000 0.00 0.00 41.45 4.35
531 597 4.386049 CACTTTAGACACCTCATCGTTGAC 59.614 45.833 0.00 0.00 0.00 3.18
532 598 4.279922 TCACTTTAGACACCTCATCGTTGA 59.720 41.667 0.00 0.00 0.00 3.18
533 599 4.386049 GTCACTTTAGACACCTCATCGTTG 59.614 45.833 0.00 0.00 38.40 4.10
534 600 4.281182 AGTCACTTTAGACACCTCATCGTT 59.719 41.667 0.00 0.00 40.98 3.85
535 601 3.827302 AGTCACTTTAGACACCTCATCGT 59.173 43.478 0.00 0.00 40.98 3.73
536 602 4.442375 AGTCACTTTAGACACCTCATCG 57.558 45.455 0.00 0.00 40.98 3.84
537 603 5.992217 ACAAAGTCACTTTAGACACCTCATC 59.008 40.000 1.43 0.00 40.98 2.92
538 604 5.930135 ACAAAGTCACTTTAGACACCTCAT 58.070 37.500 1.43 0.00 40.98 2.90
539 605 5.353394 ACAAAGTCACTTTAGACACCTCA 57.647 39.130 1.43 0.00 40.98 3.86
540 606 7.781548 TTTACAAAGTCACTTTAGACACCTC 57.218 36.000 1.43 0.00 40.98 3.85
541 607 8.747538 AATTTACAAAGTCACTTTAGACACCT 57.252 30.769 1.43 0.00 40.98 4.00
542 608 9.797556 AAAATTTACAAAGTCACTTTAGACACC 57.202 29.630 1.43 0.00 40.98 4.16
557 623 9.743057 CCGGCATATCATCTTAAAATTTACAAA 57.257 29.630 0.00 0.00 0.00 2.83
558 624 7.865385 GCCGGCATATCATCTTAAAATTTACAA 59.135 33.333 24.80 0.00 0.00 2.41
559 625 7.230510 AGCCGGCATATCATCTTAAAATTTACA 59.769 33.333 31.54 0.00 0.00 2.41
560 626 7.593825 AGCCGGCATATCATCTTAAAATTTAC 58.406 34.615 31.54 0.00 0.00 2.01
561 627 7.446931 TGAGCCGGCATATCATCTTAAAATTTA 59.553 33.333 31.54 0.00 0.00 1.40
562 628 6.265196 TGAGCCGGCATATCATCTTAAAATTT 59.735 34.615 31.54 0.00 0.00 1.82
563 629 5.769662 TGAGCCGGCATATCATCTTAAAATT 59.230 36.000 31.54 0.00 0.00 1.82
564 630 5.316167 TGAGCCGGCATATCATCTTAAAAT 58.684 37.500 31.54 0.06 0.00 1.82
565 631 4.713553 TGAGCCGGCATATCATCTTAAAA 58.286 39.130 31.54 0.00 0.00 1.52
566 632 4.318332 CTGAGCCGGCATATCATCTTAAA 58.682 43.478 31.54 0.00 0.00 1.52
567 633 3.306989 CCTGAGCCGGCATATCATCTTAA 60.307 47.826 31.54 0.00 0.00 1.85
568 634 2.234661 CCTGAGCCGGCATATCATCTTA 59.765 50.000 31.54 0.00 0.00 2.10
569 635 1.002888 CCTGAGCCGGCATATCATCTT 59.997 52.381 31.54 3.33 0.00 2.40
570 636 0.612229 CCTGAGCCGGCATATCATCT 59.388 55.000 31.54 4.27 0.00 2.90
571 637 3.149899 CCTGAGCCGGCATATCATC 57.850 57.895 31.54 16.99 0.00 2.92
580 646 4.082523 TCCGAAAGCCTGAGCCGG 62.083 66.667 0.00 0.00 41.18 6.13
581 647 2.510238 CTCCGAAAGCCTGAGCCG 60.510 66.667 0.00 0.00 41.25 5.52
582 648 2.124942 CCTCCGAAAGCCTGAGCC 60.125 66.667 0.00 0.00 41.25 4.70
583 649 1.743252 CACCTCCGAAAGCCTGAGC 60.743 63.158 0.00 0.00 40.32 4.26
584 650 1.743252 GCACCTCCGAAAGCCTGAG 60.743 63.158 0.00 0.00 0.00 3.35
585 651 2.172483 GAGCACCTCCGAAAGCCTGA 62.172 60.000 0.00 0.00 0.00 3.86
586 652 1.743252 GAGCACCTCCGAAAGCCTG 60.743 63.158 0.00 0.00 0.00 4.85
587 653 2.217038 TGAGCACCTCCGAAAGCCT 61.217 57.895 0.00 0.00 0.00 4.58
588 654 2.035442 GTGAGCACCTCCGAAAGCC 61.035 63.158 0.00 0.00 0.00 4.35
589 655 1.294659 CTGTGAGCACCTCCGAAAGC 61.295 60.000 0.00 0.00 0.00 3.51
590 656 0.671781 CCTGTGAGCACCTCCGAAAG 60.672 60.000 0.00 0.00 0.00 2.62
591 657 1.371183 CCTGTGAGCACCTCCGAAA 59.629 57.895 0.00 0.00 0.00 3.46
592 658 2.583441 CCCTGTGAGCACCTCCGAA 61.583 63.158 0.00 0.00 0.00 4.30
593 659 2.997315 CCCTGTGAGCACCTCCGA 60.997 66.667 0.00 0.00 0.00 4.55
594 660 4.087892 CCCCTGTGAGCACCTCCG 62.088 72.222 0.00 0.00 0.00 4.63
595 661 1.612442 TACCCCTGTGAGCACCTCC 60.612 63.158 0.00 0.00 0.00 4.30
596 662 1.617947 CCTACCCCTGTGAGCACCTC 61.618 65.000 0.00 0.00 0.00 3.85
597 663 1.613630 CCTACCCCTGTGAGCACCT 60.614 63.158 0.00 0.00 0.00 4.00
598 664 2.670148 CCCTACCCCTGTGAGCACC 61.670 68.421 0.00 0.00 0.00 5.01
599 665 1.918800 ACCCTACCCCTGTGAGCAC 60.919 63.158 0.00 0.00 0.00 4.40
600 666 1.918293 CACCCTACCCCTGTGAGCA 60.918 63.158 0.00 0.00 31.66 4.26
601 667 1.918800 ACACCCTACCCCTGTGAGC 60.919 63.158 0.00 0.00 34.18 4.26
602 668 1.983224 CACACCCTACCCCTGTGAG 59.017 63.158 0.00 0.00 38.02 3.51
603 669 2.221299 GCACACCCTACCCCTGTGA 61.221 63.158 1.24 0.00 38.02 3.58
604 670 2.351276 GCACACCCTACCCCTGTG 59.649 66.667 0.00 0.00 38.68 3.66
605 671 3.319198 CGCACACCCTACCCCTGT 61.319 66.667 0.00 0.00 0.00 4.00
606 672 3.319198 ACGCACACCCTACCCCTG 61.319 66.667 0.00 0.00 0.00 4.45
607 673 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
608 674 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
609 675 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
610 676 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
611 677 0.812412 AACACACACGCACACCCTAC 60.812 55.000 0.00 0.00 0.00 3.18
612 678 0.531090 GAACACACACGCACACCCTA 60.531 55.000 0.00 0.00 0.00 3.53
613 679 1.817941 GAACACACACGCACACCCT 60.818 57.895 0.00 0.00 0.00 4.34
614 680 1.444119 ATGAACACACACGCACACCC 61.444 55.000 0.00 0.00 0.00 4.61
615 681 1.194547 CTATGAACACACACGCACACC 59.805 52.381 0.00 0.00 0.00 4.16
616 682 1.194547 CCTATGAACACACACGCACAC 59.805 52.381 0.00 0.00 0.00 3.82
617 683 1.069358 TCCTATGAACACACACGCACA 59.931 47.619 0.00 0.00 0.00 4.57
618 684 1.790755 TCCTATGAACACACACGCAC 58.209 50.000 0.00 0.00 0.00 5.34
619 685 2.535012 TTCCTATGAACACACACGCA 57.465 45.000 0.00 0.00 0.00 5.24
620 686 3.000041 TCATTCCTATGAACACACACGC 59.000 45.455 0.00 0.00 37.83 5.34
621 687 4.091945 CACTCATTCCTATGAACACACACG 59.908 45.833 0.00 0.00 40.17 4.49
622 688 4.997395 ACACTCATTCCTATGAACACACAC 59.003 41.667 0.00 0.00 40.17 3.82
623 689 5.227569 ACACTCATTCCTATGAACACACA 57.772 39.130 0.00 0.00 40.17 3.72
624 690 6.238211 GCATACACTCATTCCTATGAACACAC 60.238 42.308 0.00 0.00 40.17 3.82
625 691 5.817296 GCATACACTCATTCCTATGAACACA 59.183 40.000 0.00 0.00 40.17 3.72
626 692 5.050769 CGCATACACTCATTCCTATGAACAC 60.051 44.000 0.00 0.00 40.17 3.32
627 693 5.049828 CGCATACACTCATTCCTATGAACA 58.950 41.667 0.00 0.00 40.17 3.18
628 694 4.084328 GCGCATACACTCATTCCTATGAAC 60.084 45.833 0.30 0.00 40.17 3.18
629 695 4.058124 GCGCATACACTCATTCCTATGAA 58.942 43.478 0.30 0.00 40.17 2.57
630 696 3.653344 GCGCATACACTCATTCCTATGA 58.347 45.455 0.30 0.00 38.45 2.15
631 697 2.409715 CGCGCATACACTCATTCCTATG 59.590 50.000 8.75 0.00 0.00 2.23
632 698 2.677199 CGCGCATACACTCATTCCTAT 58.323 47.619 8.75 0.00 0.00 2.57
633 699 1.868109 GCGCGCATACACTCATTCCTA 60.868 52.381 29.10 0.00 0.00 2.94
634 700 1.154205 GCGCGCATACACTCATTCCT 61.154 55.000 29.10 0.00 0.00 3.36
635 701 1.276844 GCGCGCATACACTCATTCC 59.723 57.895 29.10 0.00 0.00 3.01
636 702 1.084037 CGCGCGCATACACTCATTC 60.084 57.895 32.61 0.00 0.00 2.67
637 703 0.526739 TACGCGCGCATACACTCATT 60.527 50.000 32.58 8.19 0.00 2.57
638 704 0.318699 ATACGCGCGCATACACTCAT 60.319 50.000 32.58 8.80 0.00 2.90
639 705 0.308376 TATACGCGCGCATACACTCA 59.692 50.000 32.58 2.69 0.00 3.41
640 706 1.317611 CATATACGCGCGCATACACTC 59.682 52.381 32.58 0.00 0.00 3.51
641 707 1.068816 TCATATACGCGCGCATACACT 60.069 47.619 32.58 11.38 0.00 3.55
642 708 1.317611 CTCATATACGCGCGCATACAC 59.682 52.381 32.58 0.00 0.00 2.90
643 709 1.068816 ACTCATATACGCGCGCATACA 60.069 47.619 32.58 10.65 0.00 2.29
644 710 1.317611 CACTCATATACGCGCGCATAC 59.682 52.381 32.58 0.72 0.00 2.39
645 711 1.613270 CACTCATATACGCGCGCATA 58.387 50.000 32.58 27.72 0.00 3.14
646 712 1.617755 GCACTCATATACGCGCGCAT 61.618 55.000 32.58 26.28 0.00 4.73
647 713 2.300066 GCACTCATATACGCGCGCA 61.300 57.895 32.58 20.08 0.00 6.09
648 714 1.548973 AAGCACTCATATACGCGCGC 61.549 55.000 32.58 23.91 0.00 6.86
649 715 0.159554 CAAGCACTCATATACGCGCG 59.840 55.000 30.96 30.96 0.00 6.86
650 716 0.111089 GCAAGCACTCATATACGCGC 60.111 55.000 5.73 0.00 0.00 6.86
651 717 0.159554 CGCAAGCACTCATATACGCG 59.840 55.000 3.53 3.53 35.14 6.01
652 718 1.209128 ACGCAAGCACTCATATACGC 58.791 50.000 0.00 0.00 45.62 4.42
653 719 3.062099 ACAAACGCAAGCACTCATATACG 59.938 43.478 0.00 0.00 45.62 3.06
654 720 4.600012 ACAAACGCAAGCACTCATATAC 57.400 40.909 0.00 0.00 45.62 1.47
655 721 4.569162 GGTACAAACGCAAGCACTCATATA 59.431 41.667 0.00 0.00 45.62 0.86
656 722 3.374058 GGTACAAACGCAAGCACTCATAT 59.626 43.478 0.00 0.00 45.62 1.78
657 723 2.739913 GGTACAAACGCAAGCACTCATA 59.260 45.455 0.00 0.00 45.62 2.15
658 724 1.535462 GGTACAAACGCAAGCACTCAT 59.465 47.619 0.00 0.00 45.62 2.90
659 725 0.941542 GGTACAAACGCAAGCACTCA 59.058 50.000 0.00 0.00 45.62 3.41
660 726 0.110823 CGGTACAAACGCAAGCACTC 60.111 55.000 0.00 0.00 45.62 3.51
661 727 0.812412 ACGGTACAAACGCAAGCACT 60.812 50.000 0.00 0.00 45.62 4.40
662 728 0.656205 CACGGTACAAACGCAAGCAC 60.656 55.000 0.00 0.00 45.62 4.40
663 729 1.090625 ACACGGTACAAACGCAAGCA 61.091 50.000 0.00 0.00 45.62 3.91
664 730 0.028374 AACACGGTACAAACGCAAGC 59.972 50.000 0.00 0.00 45.62 4.01
666 732 4.346734 TTTTAACACGGTACAAACGCAA 57.653 36.364 0.00 0.00 34.00 4.85
667 733 4.093998 TCTTTTTAACACGGTACAAACGCA 59.906 37.500 0.00 0.00 34.00 5.24
668 734 4.586334 TCTTTTTAACACGGTACAAACGC 58.414 39.130 0.00 0.00 34.00 4.84
669 735 6.250089 AGTTCTTTTTAACACGGTACAAACG 58.750 36.000 0.00 0.00 37.36 3.60
670 736 9.720667 ATTAGTTCTTTTTAACACGGTACAAAC 57.279 29.630 0.00 0.00 0.00 2.93
671 737 9.719279 CATTAGTTCTTTTTAACACGGTACAAA 57.281 29.630 0.00 0.00 0.00 2.83
672 738 7.856894 GCATTAGTTCTTTTTAACACGGTACAA 59.143 33.333 0.00 0.00 0.00 2.41
673 739 7.012138 TGCATTAGTTCTTTTTAACACGGTACA 59.988 33.333 0.00 0.00 0.00 2.90
674 740 7.354257 TGCATTAGTTCTTTTTAACACGGTAC 58.646 34.615 0.00 0.00 0.00 3.34
675 741 7.493743 TGCATTAGTTCTTTTTAACACGGTA 57.506 32.000 0.00 0.00 0.00 4.02
676 742 6.380095 TGCATTAGTTCTTTTTAACACGGT 57.620 33.333 0.00 0.00 0.00 4.83
677 743 5.342259 GCTGCATTAGTTCTTTTTAACACGG 59.658 40.000 0.00 0.00 0.00 4.94
678 744 5.342259 GGCTGCATTAGTTCTTTTTAACACG 59.658 40.000 0.50 0.00 0.00 4.49
679 745 6.447162 AGGCTGCATTAGTTCTTTTTAACAC 58.553 36.000 0.50 0.00 0.00 3.32
680 746 6.648879 AGGCTGCATTAGTTCTTTTTAACA 57.351 33.333 0.50 0.00 0.00 2.41
681 747 6.366061 CCAAGGCTGCATTAGTTCTTTTTAAC 59.634 38.462 0.00 0.00 0.00 2.01
682 748 6.041523 ACCAAGGCTGCATTAGTTCTTTTTAA 59.958 34.615 0.00 0.00 0.00 1.52
683 749 5.538433 ACCAAGGCTGCATTAGTTCTTTTTA 59.462 36.000 0.00 0.00 0.00 1.52
684 750 4.344968 ACCAAGGCTGCATTAGTTCTTTTT 59.655 37.500 0.00 0.00 0.00 1.94
685 751 3.897505 ACCAAGGCTGCATTAGTTCTTTT 59.102 39.130 0.00 0.00 0.00 2.27
686 752 3.500343 ACCAAGGCTGCATTAGTTCTTT 58.500 40.909 0.00 0.00 0.00 2.52
687 753 3.160679 ACCAAGGCTGCATTAGTTCTT 57.839 42.857 0.00 0.00 0.00 2.52
688 754 2.887151 ACCAAGGCTGCATTAGTTCT 57.113 45.000 0.00 0.00 0.00 3.01
689 755 3.084786 AGAACCAAGGCTGCATTAGTTC 58.915 45.455 23.79 23.79 33.91 3.01
718 784 1.118965 CCCTGAAACCAAACACCCCC 61.119 60.000 0.00 0.00 0.00 5.40
719 785 0.105913 TCCCTGAAACCAAACACCCC 60.106 55.000 0.00 0.00 0.00 4.95
720 786 1.037493 GTCCCTGAAACCAAACACCC 58.963 55.000 0.00 0.00 0.00 4.61
721 787 2.067365 AGTCCCTGAAACCAAACACC 57.933 50.000 0.00 0.00 0.00 4.16
722 788 4.465632 AAAAGTCCCTGAAACCAAACAC 57.534 40.909 0.00 0.00 0.00 3.32
723 789 5.717654 ACTAAAAAGTCCCTGAAACCAAACA 59.282 36.000 0.00 0.00 0.00 2.83
724 790 6.216801 ACTAAAAAGTCCCTGAAACCAAAC 57.783 37.500 0.00 0.00 0.00 2.93
725 791 6.860790 AACTAAAAAGTCCCTGAAACCAAA 57.139 33.333 0.00 0.00 0.00 3.28
726 792 6.437793 TGAAACTAAAAAGTCCCTGAAACCAA 59.562 34.615 0.00 0.00 0.00 3.67
727 793 5.952947 TGAAACTAAAAAGTCCCTGAAACCA 59.047 36.000 0.00 0.00 0.00 3.67
728 794 6.320418 TCTGAAACTAAAAAGTCCCTGAAACC 59.680 38.462 0.00 0.00 0.00 3.27
729 795 7.282450 TCTCTGAAACTAAAAAGTCCCTGAAAC 59.718 37.037 0.00 0.00 0.00 2.78
730 796 7.282450 GTCTCTGAAACTAAAAAGTCCCTGAAA 59.718 37.037 0.00 0.00 0.00 2.69
731 797 6.766467 GTCTCTGAAACTAAAAAGTCCCTGAA 59.234 38.462 0.00 0.00 0.00 3.02
732 798 6.099845 AGTCTCTGAAACTAAAAAGTCCCTGA 59.900 38.462 0.00 0.00 0.00 3.86
733 799 6.292150 AGTCTCTGAAACTAAAAAGTCCCTG 58.708 40.000 0.00 0.00 0.00 4.45
734 800 6.502074 AGTCTCTGAAACTAAAAAGTCCCT 57.498 37.500 0.00 0.00 0.00 4.20
735 801 7.668492 TCTAGTCTCTGAAACTAAAAAGTCCC 58.332 38.462 0.00 0.00 0.00 4.46
736 802 9.543783 TTTCTAGTCTCTGAAACTAAAAAGTCC 57.456 33.333 0.00 0.00 0.00 3.85
754 820 8.991026 GGGACTTTTTAGAGACTTTTTCTAGTC 58.009 37.037 0.00 0.00 43.90 2.59
755 821 8.715842 AGGGACTTTTTAGAGACTTTTTCTAGT 58.284 33.333 0.00 0.00 28.84 2.57
756 822 8.994170 CAGGGACTTTTTAGAGACTTTTTCTAG 58.006 37.037 0.00 0.00 34.60 2.43
757 823 7.937394 CCAGGGACTTTTTAGAGACTTTTTCTA 59.063 37.037 0.00 0.00 34.60 2.10
758 824 6.773200 CCAGGGACTTTTTAGAGACTTTTTCT 59.227 38.462 0.00 0.00 34.60 2.52
759 825 6.016192 CCCAGGGACTTTTTAGAGACTTTTTC 60.016 42.308 0.00 0.00 34.60 2.29
760 826 5.833667 CCCAGGGACTTTTTAGAGACTTTTT 59.166 40.000 0.00 0.00 34.60 1.94
761 827 5.133830 TCCCAGGGACTTTTTAGAGACTTTT 59.866 40.000 3.01 0.00 34.60 2.27
762 828 4.663592 TCCCAGGGACTTTTTAGAGACTTT 59.336 41.667 3.01 0.00 34.60 2.66
763 829 4.240323 TCCCAGGGACTTTTTAGAGACTT 58.760 43.478 3.01 0.00 34.60 3.01
764 830 3.870559 TCCCAGGGACTTTTTAGAGACT 58.129 45.455 3.01 0.00 34.60 3.24
765 831 4.635699 TTCCCAGGGACTTTTTAGAGAC 57.364 45.455 8.12 0.00 34.60 3.36
766 832 4.849810 TGATTCCCAGGGACTTTTTAGAGA 59.150 41.667 8.12 0.00 34.60 3.10
767 833 5.179452 TGATTCCCAGGGACTTTTTAGAG 57.821 43.478 8.12 0.00 34.60 2.43
768 834 5.592587 TTGATTCCCAGGGACTTTTTAGA 57.407 39.130 8.12 0.00 34.60 2.10
769 835 6.351286 CCATTTGATTCCCAGGGACTTTTTAG 60.351 42.308 8.12 0.00 34.60 1.85
770 836 5.483583 CCATTTGATTCCCAGGGACTTTTTA 59.516 40.000 8.12 0.00 34.60 1.52
771 837 4.286808 CCATTTGATTCCCAGGGACTTTTT 59.713 41.667 8.12 0.00 34.60 1.94
772 838 3.840078 CCATTTGATTCCCAGGGACTTTT 59.160 43.478 8.12 0.00 34.60 2.27
773 839 3.444029 CCATTTGATTCCCAGGGACTTT 58.556 45.455 8.12 0.00 34.60 2.66
774 840 2.292455 CCCATTTGATTCCCAGGGACTT 60.292 50.000 8.12 0.00 38.60 3.01
775 841 1.288932 CCCATTTGATTCCCAGGGACT 59.711 52.381 8.12 1.57 38.60 3.85
776 842 1.287739 TCCCATTTGATTCCCAGGGAC 59.712 52.381 8.12 0.00 40.26 4.46
777 843 1.570501 CTCCCATTTGATTCCCAGGGA 59.429 52.381 3.01 3.01 42.76 4.20
778 844 1.412074 CCTCCCATTTGATTCCCAGGG 60.412 57.143 0.00 0.00 37.65 4.45
779 845 1.412074 CCCTCCCATTTGATTCCCAGG 60.412 57.143 0.00 0.00 0.00 4.45
780 846 1.570501 TCCCTCCCATTTGATTCCCAG 59.429 52.381 0.00 0.00 0.00 4.45
781 847 1.287739 GTCCCTCCCATTTGATTCCCA 59.712 52.381 0.00 0.00 0.00 4.37
782 848 1.570979 AGTCCCTCCCATTTGATTCCC 59.429 52.381 0.00 0.00 0.00 3.97
783 849 3.388552 AAGTCCCTCCCATTTGATTCC 57.611 47.619 0.00 0.00 0.00 3.01
784 850 5.481824 AGAAAAAGTCCCTCCCATTTGATTC 59.518 40.000 0.00 0.00 0.00 2.52
785 851 5.406163 AGAAAAAGTCCCTCCCATTTGATT 58.594 37.500 0.00 0.00 0.00 2.57
786 852 5.015813 AGAAAAAGTCCCTCCCATTTGAT 57.984 39.130 0.00 0.00 0.00 2.57
787 853 4.469469 AGAAAAAGTCCCTCCCATTTGA 57.531 40.909 0.00 0.00 0.00 2.69
788 854 4.462834 GGTAGAAAAAGTCCCTCCCATTTG 59.537 45.833 0.00 0.00 0.00 2.32
789 855 4.673968 GGTAGAAAAAGTCCCTCCCATTT 58.326 43.478 0.00 0.00 0.00 2.32
790 856 3.308188 CGGTAGAAAAAGTCCCTCCCATT 60.308 47.826 0.00 0.00 0.00 3.16
791 857 2.238898 CGGTAGAAAAAGTCCCTCCCAT 59.761 50.000 0.00 0.00 0.00 4.00
792 858 1.626825 CGGTAGAAAAAGTCCCTCCCA 59.373 52.381 0.00 0.00 0.00 4.37
793 859 1.065636 CCGGTAGAAAAAGTCCCTCCC 60.066 57.143 0.00 0.00 0.00 4.30
794 860 1.065636 CCCGGTAGAAAAAGTCCCTCC 60.066 57.143 0.00 0.00 0.00 4.30
795 861 1.904537 TCCCGGTAGAAAAAGTCCCTC 59.095 52.381 0.00 0.00 0.00 4.30
796 862 1.627329 GTCCCGGTAGAAAAAGTCCCT 59.373 52.381 0.00 0.00 0.00 4.20
797 863 1.627329 AGTCCCGGTAGAAAAAGTCCC 59.373 52.381 0.00 0.00 0.00 4.46
798 864 3.766051 TCTAGTCCCGGTAGAAAAAGTCC 59.234 47.826 0.00 0.00 0.00 3.85
799 865 5.397142 TTCTAGTCCCGGTAGAAAAAGTC 57.603 43.478 9.87 0.00 34.30 3.01
800 866 5.813513 TTTCTAGTCCCGGTAGAAAAAGT 57.186 39.130 18.49 0.00 41.43 2.66
804 870 5.541484 AGTCTTTTTCTAGTCCCGGTAGAAA 59.459 40.000 17.40 17.40 42.24 2.52
805 871 5.082425 AGTCTTTTTCTAGTCCCGGTAGAA 58.918 41.667 8.53 8.53 35.21 2.10
806 872 4.670765 AGTCTTTTTCTAGTCCCGGTAGA 58.329 43.478 0.00 0.00 0.00 2.59
807 873 4.705991 AGAGTCTTTTTCTAGTCCCGGTAG 59.294 45.833 0.00 0.00 0.00 3.18
808 874 4.670765 AGAGTCTTTTTCTAGTCCCGGTA 58.329 43.478 0.00 0.00 0.00 4.02
809 875 3.508426 AGAGTCTTTTTCTAGTCCCGGT 58.492 45.455 0.00 0.00 0.00 5.28
810 876 4.705991 AGTAGAGTCTTTTTCTAGTCCCGG 59.294 45.833 0.00 0.00 0.00 5.73
811 877 5.415077 TCAGTAGAGTCTTTTTCTAGTCCCG 59.585 44.000 0.00 0.00 30.30 5.14
812 878 6.837471 TCAGTAGAGTCTTTTTCTAGTCCC 57.163 41.667 0.00 0.00 30.30 4.46
813 879 8.113173 TCTTCAGTAGAGTCTTTTTCTAGTCC 57.887 38.462 0.00 0.00 30.30 3.85
873 939 6.263344 GTGTTTGGTTCAAAAGTCTTAGGAC 58.737 40.000 0.00 0.00 42.41 3.85
874 940 5.358725 GGTGTTTGGTTCAAAAGTCTTAGGA 59.641 40.000 0.00 0.00 35.03 2.94
875 941 5.451381 GGGTGTTTGGTTCAAAAGTCTTAGG 60.451 44.000 0.00 0.00 35.03 2.69
876 942 5.451381 GGGGTGTTTGGTTCAAAAGTCTTAG 60.451 44.000 0.00 0.00 35.03 2.18
877 943 4.403113 GGGGTGTTTGGTTCAAAAGTCTTA 59.597 41.667 0.00 0.00 35.03 2.10
878 944 3.196901 GGGGTGTTTGGTTCAAAAGTCTT 59.803 43.478 0.00 0.00 35.03 3.01
879 945 2.764010 GGGGTGTTTGGTTCAAAAGTCT 59.236 45.455 0.00 0.00 35.03 3.24
880 946 2.764010 AGGGGTGTTTGGTTCAAAAGTC 59.236 45.455 0.00 0.00 35.03 3.01
881 947 2.827755 AGGGGTGTTTGGTTCAAAAGT 58.172 42.857 0.00 0.00 35.03 2.66
882 948 4.404394 ACTTAGGGGTGTTTGGTTCAAAAG 59.596 41.667 0.00 0.00 35.03 2.27
883 949 4.354662 ACTTAGGGGTGTTTGGTTCAAAA 58.645 39.130 0.00 0.00 35.03 2.44
884 950 3.955551 GACTTAGGGGTGTTTGGTTCAAA 59.044 43.478 0.00 0.00 0.00 2.69
885 951 3.558033 GACTTAGGGGTGTTTGGTTCAA 58.442 45.455 0.00 0.00 0.00 2.69
886 952 2.158579 GGACTTAGGGGTGTTTGGTTCA 60.159 50.000 0.00 0.00 0.00 3.18
887 953 2.511659 GGACTTAGGGGTGTTTGGTTC 58.488 52.381 0.00 0.00 0.00 3.62
888 954 1.146359 GGGACTTAGGGGTGTTTGGTT 59.854 52.381 0.00 0.00 0.00 3.67
889 955 0.775542 GGGACTTAGGGGTGTTTGGT 59.224 55.000 0.00 0.00 0.00 3.67
890 956 0.774908 TGGGACTTAGGGGTGTTTGG 59.225 55.000 0.00 0.00 0.00 3.28
891 957 1.880646 CGTGGGACTTAGGGGTGTTTG 60.881 57.143 0.00 0.00 0.00 2.93
892 958 0.399075 CGTGGGACTTAGGGGTGTTT 59.601 55.000 0.00 0.00 0.00 2.83
893 959 2.063774 CGTGGGACTTAGGGGTGTT 58.936 57.895 0.00 0.00 0.00 3.32
894 960 2.590114 GCGTGGGACTTAGGGGTGT 61.590 63.158 0.00 0.00 0.00 4.16
895 961 2.267961 GCGTGGGACTTAGGGGTG 59.732 66.667 0.00 0.00 0.00 4.61
896 962 3.387947 CGCGTGGGACTTAGGGGT 61.388 66.667 0.00 0.00 0.00 4.95
897 963 3.072468 TCGCGTGGGACTTAGGGG 61.072 66.667 5.77 0.00 0.00 4.79
898 964 2.005960 CTCTCGCGTGGGACTTAGGG 62.006 65.000 5.77 0.00 0.00 3.53
899 965 1.030488 TCTCTCGCGTGGGACTTAGG 61.030 60.000 6.66 0.00 0.00 2.69
900 966 0.809385 TTCTCTCGCGTGGGACTTAG 59.191 55.000 10.81 0.00 0.00 2.18
901 967 1.250328 TTTCTCTCGCGTGGGACTTA 58.750 50.000 10.81 0.00 0.00 2.24
902 968 0.391597 TTTTCTCTCGCGTGGGACTT 59.608 50.000 10.81 0.00 0.00 3.01
903 969 0.391597 TTTTTCTCTCGCGTGGGACT 59.608 50.000 10.81 0.00 0.00 3.85
904 970 0.511653 GTTTTTCTCTCGCGTGGGAC 59.488 55.000 10.81 0.00 0.00 4.46
991 1061 1.706443 GCTGCTGCCATCTTTTGTTC 58.294 50.000 3.85 0.00 0.00 3.18
1124 1194 4.357279 GGCTGCTGGTTCTGGGCT 62.357 66.667 0.00 0.00 0.00 5.19
1126 1196 4.748144 GGGGCTGCTGGTTCTGGG 62.748 72.222 0.00 0.00 0.00 4.45
1127 1197 3.635268 GAGGGGCTGCTGGTTCTGG 62.635 68.421 0.00 0.00 0.00 3.86
1128 1198 2.045536 GAGGGGCTGCTGGTTCTG 60.046 66.667 0.00 0.00 0.00 3.02
1129 1199 3.334054 GGAGGGGCTGCTGGTTCT 61.334 66.667 0.00 0.00 0.00 3.01
1130 1200 4.432741 GGGAGGGGCTGCTGGTTC 62.433 72.222 0.00 0.00 0.00 3.62
1156 1226 0.099082 AAGAGGATCGCGTTCTCGAC 59.901 55.000 16.17 6.32 42.67 4.20
1166 1236 1.123077 TGGGATGGTGAAGAGGATCG 58.877 55.000 0.00 0.00 42.67 3.69
1413 1483 1.302993 GCCGGCAGAGGTTTTACCA 60.303 57.895 24.80 0.00 41.95 3.25
1416 1486 2.046700 CGGCCGGCAGAGGTTTTA 60.047 61.111 30.85 0.00 0.00 1.52
1431 1501 2.746277 CGCCAGGGAAGGAAACGG 60.746 66.667 0.00 0.00 0.00 4.44
1433 1503 3.431725 CGCGCCAGGGAAGGAAAC 61.432 66.667 0.00 0.00 0.00 2.78
1435 1505 4.388499 GTCGCGCCAGGGAAGGAA 62.388 66.667 0.00 0.00 41.13 3.36
1476 1546 4.704103 AGGTCAGGCGCTGGAGGA 62.704 66.667 7.64 0.00 31.51 3.71
1518 1588 1.444553 GTACTTGAGCAGCGCGTCT 60.445 57.895 8.43 2.25 0.00 4.18
1547 1617 2.600122 CTTCTTCCCGAGCTCCGTCG 62.600 65.000 8.47 0.00 39.77 5.12
1696 1766 2.574955 GGTCCGTGTGCTCCAGACT 61.575 63.158 0.00 0.00 0.00 3.24
1698 1768 3.311110 GGGTCCGTGTGCTCCAGA 61.311 66.667 0.00 0.00 0.00 3.86
1722 1792 1.227823 CTGTGCCAGGACGGTGAAA 60.228 57.895 0.00 0.00 36.97 2.69
1746 1816 3.003763 ACCTGAAGCCCTCCGACC 61.004 66.667 0.00 0.00 0.00 4.79
1837 1907 1.444119 GAGGCACAACGCACCTTGAA 61.444 55.000 0.00 0.00 45.17 2.69
1852 1922 1.153208 CATCCACAGAGCTGGAGGC 60.153 63.158 0.00 0.00 43.82 4.70
1866 1936 3.878778 AGATTGGTAGCAGTTCACATCC 58.121 45.455 8.94 0.00 0.00 3.51
1869 1939 3.580895 TGGTAGATTGGTAGCAGTTCACA 59.419 43.478 8.94 3.64 0.00 3.58
1895 1965 4.149511 TCCATCCGCAAGTAAATCATCA 57.850 40.909 0.00 0.00 0.00 3.07
1922 1992 5.416952 ACTCATCATTTGAAACCACCTGATC 59.583 40.000 0.00 0.00 32.78 2.92
1923 1993 5.327732 ACTCATCATTTGAAACCACCTGAT 58.672 37.500 0.00 0.00 32.78 2.90
1982 2052 1.003355 ACACCCTGGCATCTTGACG 60.003 57.895 0.00 0.00 0.00 4.35
2026 2096 2.125147 TCGGATTCCTGGCGCTTG 60.125 61.111 7.64 0.00 0.00 4.01
2123 2193 0.179089 CCATGCTCTCTTCGGGAGTG 60.179 60.000 6.30 5.49 42.40 3.51
2195 2265 4.033932 CGATAGTCCGCACAAATCATTTCA 59.966 41.667 0.00 0.00 0.00 2.69
2196 2266 4.518217 CGATAGTCCGCACAAATCATTTC 58.482 43.478 0.00 0.00 0.00 2.17
2237 2307 1.468565 CCGGAGAAACATGCATGCTTG 60.469 52.381 26.53 26.93 0.00 4.01
2238 2308 0.813184 CCGGAGAAACATGCATGCTT 59.187 50.000 26.53 20.75 0.00 3.91
2239 2309 1.033746 CCCGGAGAAACATGCATGCT 61.034 55.000 26.53 15.41 0.00 3.79
2240 2310 1.031571 TCCCGGAGAAACATGCATGC 61.032 55.000 26.53 11.82 0.00 4.06
2241 2311 0.734889 GTCCCGGAGAAACATGCATG 59.265 55.000 25.09 25.09 0.00 4.06
2242 2312 0.744414 CGTCCCGGAGAAACATGCAT 60.744 55.000 0.73 0.00 0.00 3.96
2243 2313 1.375396 CGTCCCGGAGAAACATGCA 60.375 57.895 0.73 0.00 0.00 3.96
2244 2314 0.672401 TTCGTCCCGGAGAAACATGC 60.672 55.000 0.73 0.00 0.00 4.06
2245 2315 1.076332 GTTCGTCCCGGAGAAACATG 58.924 55.000 0.73 0.00 0.00 3.21
2246 2316 0.974383 AGTTCGTCCCGGAGAAACAT 59.026 50.000 0.73 0.00 0.00 2.71
2247 2317 0.754472 AAGTTCGTCCCGGAGAAACA 59.246 50.000 0.73 0.00 0.00 2.83
2248 2318 1.145803 CAAGTTCGTCCCGGAGAAAC 58.854 55.000 0.73 1.61 0.00 2.78
2249 2319 0.034337 CCAAGTTCGTCCCGGAGAAA 59.966 55.000 0.73 0.00 0.00 2.52
2250 2320 1.669440 CCAAGTTCGTCCCGGAGAA 59.331 57.895 0.73 2.49 0.00 2.87
2251 2321 2.939261 GCCAAGTTCGTCCCGGAGA 61.939 63.158 0.73 0.00 0.00 3.71
2252 2322 2.434359 GCCAAGTTCGTCCCGGAG 60.434 66.667 0.73 0.00 0.00 4.63
2253 2323 4.011517 GGCCAAGTTCGTCCCGGA 62.012 66.667 0.73 0.00 0.00 5.14
2254 2324 3.622060 ATGGCCAAGTTCGTCCCGG 62.622 63.158 10.96 0.00 0.00 5.73
2255 2325 2.046314 ATGGCCAAGTTCGTCCCG 60.046 61.111 10.96 0.00 0.00 5.14
2256 2326 1.303317 ACATGGCCAAGTTCGTCCC 60.303 57.895 10.96 0.00 0.00 4.46
2270 2340 4.524316 TTTCCATTTCTGCCAAGACATG 57.476 40.909 0.00 0.00 39.40 3.21
2325 2397 5.901413 ATTATGTGATGTGAGGAGTGGAT 57.099 39.130 0.00 0.00 0.00 3.41
2356 2428 6.260050 GTCCCGAGCTCAAATATCATAAACAA 59.740 38.462 15.40 0.00 0.00 2.83
2388 2468 5.828747 TGCTCTATACATACCGAAAGTGTC 58.171 41.667 0.00 0.00 0.00 3.67
2439 2519 6.881065 TGCTTTGTTTATAGCACAAGAGAGAT 59.119 34.615 0.00 0.00 42.12 2.75
2491 2571 0.322975 TGCAAACTCTCTCTGCTCCC 59.677 55.000 0.00 0.00 37.00 4.30
2494 2574 0.948141 GCGTGCAAACTCTCTCTGCT 60.948 55.000 0.00 0.00 37.00 4.24
2617 2697 2.479566 TGCAGGTTCAGGATGTTCTC 57.520 50.000 0.00 0.00 37.40 2.87
2638 2718 1.879380 TCTGCTGTGGGATTGAAAACG 59.121 47.619 0.00 0.00 0.00 3.60
2694 2774 5.189145 GTCAAGGAAATTGTCTCCCTACCTA 59.811 44.000 0.00 0.00 40.05 3.08
2706 2788 3.998341 CCAAGGCAATGTCAAGGAAATTG 59.002 43.478 5.03 5.03 39.51 2.32
2717 2799 6.010219 AGTATTAAGTGAACCAAGGCAATGT 58.990 36.000 0.00 0.00 0.00 2.71
2775 2860 7.292356 TGCTAGATGATAGTTAAATCCCCAGAA 59.708 37.037 0.00 0.00 0.00 3.02
2777 2862 6.876257 GTGCTAGATGATAGTTAAATCCCCAG 59.124 42.308 0.00 0.00 0.00 4.45
2812 2897 6.952935 ACTGCGACAATTTTTCTCTACTAG 57.047 37.500 0.00 0.00 0.00 2.57
2819 2904 5.637810 TCGATCTTACTGCGACAATTTTTCT 59.362 36.000 0.00 0.00 0.00 2.52
2903 2988 6.693113 CAGCAGGTTCTTAACTGTTCTTTTTC 59.307 38.462 0.00 0.00 37.07 2.29
3004 3092 1.324383 TGCAGTACTCGACAGACCAA 58.676 50.000 0.00 0.00 0.00 3.67
3024 3112 9.571816 TTATCCTGCATTAACAACATATCATCA 57.428 29.630 0.00 0.00 0.00 3.07
3054 3145 6.494893 TTTGACATTTCTATAGCCACACAC 57.505 37.500 0.00 0.00 0.00 3.82
3062 3153 9.110502 GAACCCCTACTTTTGACATTTCTATAG 57.889 37.037 0.00 0.00 0.00 1.31
3063 3154 8.832735 AGAACCCCTACTTTTGACATTTCTATA 58.167 33.333 0.00 0.00 0.00 1.31
3064 3155 7.699878 AGAACCCCTACTTTTGACATTTCTAT 58.300 34.615 0.00 0.00 0.00 1.98
3065 3156 7.086685 AGAACCCCTACTTTTGACATTTCTA 57.913 36.000 0.00 0.00 0.00 2.10
3066 3157 5.953571 AGAACCCCTACTTTTGACATTTCT 58.046 37.500 0.00 0.00 0.00 2.52
3067 3158 7.610305 TGATAGAACCCCTACTTTTGACATTTC 59.390 37.037 0.00 0.00 0.00 2.17
3069 3160 6.884836 GTGATAGAACCCCTACTTTTGACATT 59.115 38.462 0.00 0.00 0.00 2.71
3070 3161 6.215636 AGTGATAGAACCCCTACTTTTGACAT 59.784 38.462 0.00 0.00 0.00 3.06
3071 3162 5.546499 AGTGATAGAACCCCTACTTTTGACA 59.454 40.000 0.00 0.00 0.00 3.58
3083 3174 4.386867 TGTGATTCGAGTGATAGAACCC 57.613 45.455 0.00 0.00 0.00 4.11
3142 3233 5.279456 GGTTGTTGGTGAAATATTCAAGGCT 60.279 40.000 0.00 0.00 42.15 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.