Multiple sequence alignment - TraesCS7B01G128400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G128400 chr7B 100.000 2723 0 0 1 2723 153581435 153584157 0.000000e+00 5029.0
1 TraesCS7B01G128400 chr7B 88.958 1449 96 27 419 1858 153743762 153742369 0.000000e+00 1731.0
2 TraesCS7B01G128400 chr7B 85.203 419 18 7 1 407 153744252 153743866 9.140000e-105 390.0
3 TraesCS7B01G128400 chr7B 83.623 403 53 11 2286 2682 2780531 2780926 1.540000e-97 366.0
4 TraesCS7B01G128400 chr7A 88.056 1867 115 31 1 1831 185975033 185976827 0.000000e+00 2113.0
5 TraesCS7B01G128400 chr7A 88.746 1715 96 44 419 2117 186097312 186095679 0.000000e+00 2008.0
6 TraesCS7B01G128400 chr7A 92.754 414 22 4 1 407 186097828 186097416 2.330000e-165 592.0
7 TraesCS7B01G128400 chr7A 85.380 171 8 6 1873 2034 185976816 185976978 7.800000e-36 161.0
8 TraesCS7B01G128400 chr7D 93.047 1352 54 10 419 1766 184500271 184501586 0.000000e+00 1940.0
9 TraesCS7B01G128400 chr7D 89.627 1446 87 23 414 1850 184523982 184522591 0.000000e+00 1781.0
10 TraesCS7B01G128400 chr7D 95.588 408 16 2 1 407 184499765 184500171 0.000000e+00 652.0
11 TraesCS7B01G128400 chr7D 86.199 413 19 5 1 407 184524462 184524082 1.950000e-111 412.0
12 TraesCS7B01G128400 chr7D 87.692 130 9 5 1962 2087 184522502 184522376 7.860000e-31 145.0
13 TraesCS7B01G128400 chr7D 87.302 126 11 2 2053 2176 184505005 184505127 3.660000e-29 139.0
14 TraesCS7B01G128400 chr7D 77.358 212 14 13 1871 2062 184501643 184501840 8.030000e-16 95.3
15 TraesCS7B01G128400 chr3D 86.667 480 33 15 2268 2720 24754376 24754851 1.130000e-138 503.0
16 TraesCS7B01G128400 chr3A 85.526 380 42 12 2269 2643 298209085 298209456 4.250000e-103 385.0
17 TraesCS7B01G128400 chr5D 83.529 425 51 16 2268 2682 496660021 496659606 1.980000e-101 379.0
18 TraesCS7B01G128400 chr4D 85.185 378 44 11 2286 2658 450313146 450312776 7.120000e-101 377.0
19 TraesCS7B01G128400 chr5B 83.085 402 56 11 2286 2682 509927055 509927449 3.330000e-94 355.0
20 TraesCS7B01G128400 chr3B 84.110 365 49 8 2286 2647 728280983 728280625 7.220000e-91 344.0
21 TraesCS7B01G128400 chr3B 82.850 379 50 13 2286 2658 147711053 147711422 2.610000e-85 326.0
22 TraesCS7B01G128400 chr5A 83.957 374 42 12 2286 2651 293438221 293438584 2.600000e-90 342.0
23 TraesCS7B01G128400 chr6D 73.975 707 144 36 1035 1721 114225404 114226090 1.620000e-62 250.0
24 TraesCS7B01G128400 chr6A 73.907 709 141 41 1035 1721 142773553 142774239 7.530000e-61 244.0
25 TraesCS7B01G128400 chr6B 72.877 730 155 40 1035 1741 203894878 203895587 7.640000e-51 211.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G128400 chr7B 153581435 153584157 2722 False 5029.000000 5029 100.000000 1 2723 1 chr7B.!!$F2 2722
1 TraesCS7B01G128400 chr7B 153742369 153744252 1883 True 1060.500000 1731 87.080500 1 1858 2 chr7B.!!$R1 1857
2 TraesCS7B01G128400 chr7A 186095679 186097828 2149 True 1300.000000 2008 90.750000 1 2117 2 chr7A.!!$R1 2116
3 TraesCS7B01G128400 chr7A 185975033 185976978 1945 False 1137.000000 2113 86.718000 1 2034 2 chr7A.!!$F1 2033
4 TraesCS7B01G128400 chr7D 184522376 184524462 2086 True 779.333333 1781 87.839333 1 2087 3 chr7D.!!$R1 2086
5 TraesCS7B01G128400 chr7D 184499765 184505127 5362 False 706.575000 1940 88.323750 1 2176 4 chr7D.!!$F1 2175
6 TraesCS7B01G128400 chr6D 114225404 114226090 686 False 250.000000 250 73.975000 1035 1721 1 chr6D.!!$F1 686
7 TraesCS7B01G128400 chr6A 142773553 142774239 686 False 244.000000 244 73.907000 1035 1721 1 chr6A.!!$F1 686
8 TraesCS7B01G128400 chr6B 203894878 203895587 709 False 211.000000 211 72.877000 1035 1741 1 chr6B.!!$F1 706

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 985 0.179034 GCAGGACATGGGAAGGCTAG 60.179 60.0 0.0 0.0 0.0 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2204 5573 0.108992 TAGTTCTTGCCGCGGTAGTG 60.109 55.0 28.7 18.58 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
180 203 1.880271 TCCGATCTCCACTACTAGCG 58.120 55.000 0.00 0.00 0.00 4.26
244 267 2.031516 CCCTGTCTGCTCTTGTGCG 61.032 63.158 0.00 0.00 35.36 5.34
261 284 2.383527 CGTGCTCGTTCTTGCTCCC 61.384 63.158 0.00 0.00 0.00 4.30
383 406 3.659183 CCCTTCTGGTGAGAATTCCAT 57.341 47.619 0.65 0.00 37.58 3.41
384 407 3.973425 CCCTTCTGGTGAGAATTCCATT 58.027 45.455 0.65 0.00 37.58 3.16
386 409 4.338879 CCTTCTGGTGAGAATTCCATTGT 58.661 43.478 0.65 0.00 37.58 2.71
389 412 7.282585 CCTTCTGGTGAGAATTCCATTGTATA 58.717 38.462 0.65 0.00 37.58 1.47
415 459 5.247862 TCTTCATGTGCTTGCTCTTTATGA 58.752 37.500 0.00 0.00 0.00 2.15
423 467 5.741040 GTGCTTGCTCTTTATGATAAGTTGC 59.259 40.000 0.00 0.00 0.00 4.17
468 598 1.303561 GGCAATGGACTGGCTGTGA 60.304 57.895 0.29 0.00 38.77 3.58
469 599 1.589716 GGCAATGGACTGGCTGTGAC 61.590 60.000 0.29 0.00 38.77 3.67
470 600 1.915614 GCAATGGACTGGCTGTGACG 61.916 60.000 0.29 0.00 0.00 4.35
471 601 1.672356 AATGGACTGGCTGTGACGC 60.672 57.895 0.29 0.00 0.00 5.19
472 602 2.395988 AATGGACTGGCTGTGACGCA 62.396 55.000 0.29 0.00 0.00 5.24
473 603 2.046892 GGACTGGCTGTGACGCAT 60.047 61.111 0.29 0.00 0.00 4.73
474 604 2.103042 GGACTGGCTGTGACGCATC 61.103 63.158 0.29 0.00 0.00 3.91
744 874 2.169789 CATCGGAGCCACGCTTCTG 61.170 63.158 0.00 0.00 39.88 3.02
804 934 1.609501 CTTCGACCCCTCCCACTCA 60.610 63.158 0.00 0.00 0.00 3.41
805 935 0.978146 CTTCGACCCCTCCCACTCAT 60.978 60.000 0.00 0.00 0.00 2.90
806 936 0.976073 TTCGACCCCTCCCACTCATC 60.976 60.000 0.00 0.00 0.00 2.92
807 937 1.685765 CGACCCCTCCCACTCATCA 60.686 63.158 0.00 0.00 0.00 3.07
810 940 0.344790 ACCCCTCCCACTCATCATCT 59.655 55.000 0.00 0.00 0.00 2.90
848 984 1.635817 GGCAGGACATGGGAAGGCTA 61.636 60.000 0.00 0.00 0.00 3.93
849 985 0.179034 GCAGGACATGGGAAGGCTAG 60.179 60.000 0.00 0.00 0.00 3.42
850 986 0.179034 CAGGACATGGGAAGGCTAGC 60.179 60.000 6.04 6.04 0.00 3.42
851 987 0.327000 AGGACATGGGAAGGCTAGCT 60.327 55.000 15.72 0.00 0.00 3.32
852 988 0.179034 GGACATGGGAAGGCTAGCTG 60.179 60.000 15.72 5.47 0.00 4.24
853 989 0.543749 GACATGGGAAGGCTAGCTGT 59.456 55.000 15.72 9.01 0.00 4.40
1000 1136 3.523157 TCAGGTTCCTTTGCATGGAGATA 59.477 43.478 8.64 0.00 34.76 1.98
1001 1137 4.166725 TCAGGTTCCTTTGCATGGAGATAT 59.833 41.667 8.64 0.00 34.76 1.63
1002 1138 4.277672 CAGGTTCCTTTGCATGGAGATATG 59.722 45.833 8.64 4.58 34.76 1.78
1003 1139 4.079558 AGGTTCCTTTGCATGGAGATATGT 60.080 41.667 8.64 0.00 34.76 2.29
1004 1140 4.646492 GGTTCCTTTGCATGGAGATATGTT 59.354 41.667 8.64 0.00 34.76 2.71
1005 1141 5.221126 GGTTCCTTTGCATGGAGATATGTTC 60.221 44.000 8.64 0.00 34.76 3.18
1006 1142 4.464008 TCCTTTGCATGGAGATATGTTCC 58.536 43.478 5.01 0.00 35.20 3.62
1007 1143 4.166725 TCCTTTGCATGGAGATATGTTCCT 59.833 41.667 5.01 0.00 35.67 3.36
1008 1144 4.891756 CCTTTGCATGGAGATATGTTCCTT 59.108 41.667 0.00 0.00 35.67 3.36
1009 1145 5.361857 CCTTTGCATGGAGATATGTTCCTTT 59.638 40.000 0.00 0.00 35.67 3.11
1010 1146 5.840243 TTGCATGGAGATATGTTCCTTTG 57.160 39.130 0.00 4.26 35.67 2.77
1011 1147 3.633525 TGCATGGAGATATGTTCCTTTGC 59.366 43.478 16.27 16.27 41.16 3.68
1012 1148 3.633525 GCATGGAGATATGTTCCTTTGCA 59.366 43.478 17.27 0.00 40.81 4.08
1013 1149 4.280174 GCATGGAGATATGTTCCTTTGCAT 59.720 41.667 17.27 0.00 40.81 3.96
1014 1150 5.769367 CATGGAGATATGTTCCTTTGCATG 58.231 41.667 0.00 0.00 35.67 4.06
1015 1151 4.209538 TGGAGATATGTTCCTTTGCATGG 58.790 43.478 0.00 0.00 35.67 3.66
1016 1152 4.079844 TGGAGATATGTTCCTTTGCATGGA 60.080 41.667 5.01 5.01 35.67 3.41
1017 1153 4.518211 GGAGATATGTTCCTTTGCATGGAG 59.482 45.833 8.64 0.00 34.76 3.86
1018 1154 5.371526 GAGATATGTTCCTTTGCATGGAGA 58.628 41.667 8.64 2.06 34.76 3.71
1019 1155 5.950023 AGATATGTTCCTTTGCATGGAGAT 58.050 37.500 8.64 7.99 34.76 2.75
1020 1156 7.083062 AGATATGTTCCTTTGCATGGAGATA 57.917 36.000 8.64 9.47 34.76 1.98
1143 1279 1.687146 CTCCTACTGCCTGCCCAGA 60.687 63.158 0.00 0.00 36.67 3.86
1272 1414 3.037549 CCTCTACTTCCTGAGGCTCATT 58.962 50.000 19.11 3.00 42.62 2.57
1394 1536 2.277756 GTACGAGTACCTGCGCGG 60.278 66.667 9.96 9.96 36.04 6.46
1415 1557 1.064906 CCTGTTCAGGCTGTGGATGAT 60.065 52.381 15.27 0.00 0.00 2.45
1434 1576 1.599518 CAGTTACAAGGTGGCGCCA 60.600 57.895 29.03 29.03 40.61 5.69
1830 1976 5.241403 TGGTTCTTCAGAAATAAGGCTCA 57.759 39.130 0.00 0.00 35.58 4.26
1832 1978 4.093556 GGTTCTTCAGAAATAAGGCTCACG 59.906 45.833 0.00 0.00 35.58 4.35
1835 1981 2.346803 TCAGAAATAAGGCTCACGCAC 58.653 47.619 0.00 0.00 38.10 5.34
1844 1990 2.437343 GCTCACGCACGTCACTAGC 61.437 63.158 0.00 0.00 35.78 3.42
1847 1993 0.446616 TCACGCACGTCACTAGCTAG 59.553 55.000 19.44 19.44 0.00 3.42
1848 1994 0.446616 CACGCACGTCACTAGCTAGA 59.553 55.000 27.45 2.86 0.00 2.43
1849 1995 1.064208 CACGCACGTCACTAGCTAGAT 59.936 52.381 27.45 8.78 0.00 1.98
1850 1996 2.287103 CACGCACGTCACTAGCTAGATA 59.713 50.000 27.45 11.39 0.00 1.98
1851 1997 2.544686 ACGCACGTCACTAGCTAGATAG 59.455 50.000 27.45 13.47 0.00 2.08
1852 1998 2.801111 CGCACGTCACTAGCTAGATAGA 59.199 50.000 27.45 17.39 0.00 1.98
1853 1999 3.433957 CGCACGTCACTAGCTAGATAGAT 59.566 47.826 27.45 6.75 0.00 1.98
1864 2010 9.237187 CACTAGCTAGATAGATGATGGTTCTTA 57.763 37.037 27.45 0.00 0.00 2.10
1865 2011 9.461312 ACTAGCTAGATAGATGATGGTTCTTAG 57.539 37.037 27.45 0.00 0.00 2.18
1866 2012 9.461312 CTAGCTAGATAGATGATGGTTCTTAGT 57.539 37.037 16.15 0.00 0.00 2.24
1868 2014 9.815306 AGCTAGATAGATGATGGTTCTTAGTAA 57.185 33.333 0.00 0.00 0.00 2.24
1921 2067 2.364324 TGTGTAAGTGTGGAGTGGAGTC 59.636 50.000 0.00 0.00 0.00 3.36
1935 2081 2.037871 GAGTCATCTCCGGCTCTCC 58.962 63.158 0.00 0.00 34.87 3.71
2043 2234 1.331756 CGATAGACCAACATGCTTGGC 59.668 52.381 20.36 15.03 43.23 4.52
2096 5465 4.364415 TTGTTGTTCGTTCCAAAAGGAG 57.636 40.909 0.00 0.00 31.42 3.69
2105 5474 6.554334 TCGTTCCAAAAGGAGATTAAGTTG 57.446 37.500 0.00 0.00 0.00 3.16
2113 5482 7.649306 CCAAAAGGAGATTAAGTTGAACACAAG 59.351 37.037 0.00 0.00 0.00 3.16
2122 5491 2.689983 AGTTGAACACAAGCTGAAAGGG 59.310 45.455 0.00 0.00 0.00 3.95
2128 5497 1.075482 CAAGCTGAAAGGGCCCTGA 59.925 57.895 29.50 12.02 0.00 3.86
2155 5524 4.773323 AAAGATGCTTGTTTGCTAGACC 57.227 40.909 0.00 0.00 0.00 3.85
2164 5533 2.034053 TGTTTGCTAGACCGCCTTTTTG 59.966 45.455 0.00 0.00 0.00 2.44
2167 5536 1.794222 CTAGACCGCCTTTTTGCCG 59.206 57.895 0.00 0.00 0.00 5.69
2169 5538 0.250381 TAGACCGCCTTTTTGCCGAA 60.250 50.000 0.00 0.00 0.00 4.30
2183 5552 6.773976 TTTTGCCGAAAAAGATCCATATCT 57.226 33.333 0.00 0.00 44.67 1.98
2184 5553 7.873719 TTTTGCCGAAAAAGATCCATATCTA 57.126 32.000 0.00 0.00 41.81 1.98
2185 5554 8.463930 TTTTGCCGAAAAAGATCCATATCTAT 57.536 30.769 0.00 0.00 41.81 1.98
2186 5555 8.463930 TTTGCCGAAAAAGATCCATATCTATT 57.536 30.769 0.00 0.00 41.81 1.73
2187 5556 8.463930 TTGCCGAAAAAGATCCATATCTATTT 57.536 30.769 0.00 0.00 41.81 1.40
2188 5557 8.099364 TGCCGAAAAAGATCCATATCTATTTC 57.901 34.615 0.00 0.00 41.81 2.17
2189 5558 7.719193 TGCCGAAAAAGATCCATATCTATTTCA 59.281 33.333 0.00 0.00 41.81 2.69
2190 5559 8.567948 GCCGAAAAAGATCCATATCTATTTCAA 58.432 33.333 0.00 0.00 41.81 2.69
2201 5570 9.056005 TCCATATCTATTTCAAAAGTTCATCGG 57.944 33.333 0.00 0.00 0.00 4.18
2202 5571 9.056005 CCATATCTATTTCAAAAGTTCATCGGA 57.944 33.333 0.00 0.00 0.00 4.55
2203 5572 9.869844 CATATCTATTTCAAAAGTTCATCGGAC 57.130 33.333 0.00 0.00 0.00 4.79
2204 5573 6.737254 TCTATTTCAAAAGTTCATCGGACC 57.263 37.500 0.00 0.00 0.00 4.46
2205 5574 6.234920 TCTATTTCAAAAGTTCATCGGACCA 58.765 36.000 0.00 0.00 0.00 4.02
2206 5575 4.561735 TTTCAAAAGTTCATCGGACCAC 57.438 40.909 0.00 0.00 0.00 4.16
2207 5576 3.485463 TCAAAAGTTCATCGGACCACT 57.515 42.857 0.00 0.00 0.00 4.00
2208 5577 4.610605 TCAAAAGTTCATCGGACCACTA 57.389 40.909 0.00 0.00 0.00 2.74
2209 5578 4.312443 TCAAAAGTTCATCGGACCACTAC 58.688 43.478 0.00 0.00 0.00 2.73
2210 5579 3.329929 AAAGTTCATCGGACCACTACC 57.670 47.619 0.00 0.00 0.00 3.18
2217 5586 4.382320 GGACCACTACCGCGGCAA 62.382 66.667 28.58 13.53 0.00 4.52
2218 5587 2.813908 GACCACTACCGCGGCAAG 60.814 66.667 28.58 25.10 0.00 4.01
2219 5588 3.291101 GACCACTACCGCGGCAAGA 62.291 63.158 29.04 11.64 0.00 3.02
2220 5589 2.047655 CCACTACCGCGGCAAGAA 60.048 61.111 29.04 9.43 0.00 2.52
2221 5590 2.388232 CCACTACCGCGGCAAGAAC 61.388 63.158 29.04 0.00 0.00 3.01
2222 5591 1.374252 CACTACCGCGGCAAGAACT 60.374 57.895 29.04 10.99 0.00 3.01
2223 5592 0.108992 CACTACCGCGGCAAGAACTA 60.109 55.000 29.04 11.54 0.00 2.24
2224 5593 0.172803 ACTACCGCGGCAAGAACTAG 59.827 55.000 29.04 21.27 0.00 2.57
2225 5594 0.454600 CTACCGCGGCAAGAACTAGA 59.545 55.000 28.58 0.00 0.00 2.43
2226 5595 0.171903 TACCGCGGCAAGAACTAGAC 59.828 55.000 28.58 0.00 0.00 2.59
2227 5596 1.810030 CCGCGGCAAGAACTAGACC 60.810 63.158 14.67 0.00 0.00 3.85
2228 5597 1.215647 CGCGGCAAGAACTAGACCT 59.784 57.895 0.00 0.00 0.00 3.85
2229 5598 0.389948 CGCGGCAAGAACTAGACCTT 60.390 55.000 0.00 0.00 0.00 3.50
2230 5599 1.135199 CGCGGCAAGAACTAGACCTTA 60.135 52.381 0.00 0.00 0.00 2.69
2231 5600 2.269172 GCGGCAAGAACTAGACCTTAC 58.731 52.381 0.00 0.00 0.00 2.34
2232 5601 2.353406 GCGGCAAGAACTAGACCTTACA 60.353 50.000 0.00 0.00 0.00 2.41
2233 5602 3.679083 GCGGCAAGAACTAGACCTTACAT 60.679 47.826 0.00 0.00 0.00 2.29
2234 5603 4.441079 GCGGCAAGAACTAGACCTTACATA 60.441 45.833 0.00 0.00 0.00 2.29
2235 5604 5.739358 GCGGCAAGAACTAGACCTTACATAT 60.739 44.000 0.00 0.00 0.00 1.78
2236 5605 5.921408 CGGCAAGAACTAGACCTTACATATC 59.079 44.000 0.00 0.00 0.00 1.63
2237 5606 5.921408 GGCAAGAACTAGACCTTACATATCG 59.079 44.000 0.00 0.00 0.00 2.92
2238 5607 6.238953 GGCAAGAACTAGACCTTACATATCGA 60.239 42.308 0.00 0.00 0.00 3.59
2239 5608 6.858993 GCAAGAACTAGACCTTACATATCGAG 59.141 42.308 0.00 0.00 0.00 4.04
2240 5609 7.255173 GCAAGAACTAGACCTTACATATCGAGA 60.255 40.741 0.00 0.00 0.00 4.04
2241 5610 8.622157 CAAGAACTAGACCTTACATATCGAGAA 58.378 37.037 0.00 0.00 0.00 2.87
2242 5611 8.749026 AGAACTAGACCTTACATATCGAGAAA 57.251 34.615 0.00 0.00 0.00 2.52
2243 5612 9.186837 AGAACTAGACCTTACATATCGAGAAAA 57.813 33.333 0.00 0.00 0.00 2.29
2244 5613 9.235537 GAACTAGACCTTACATATCGAGAAAAC 57.764 37.037 0.00 0.00 0.00 2.43
2245 5614 8.289939 ACTAGACCTTACATATCGAGAAAACA 57.710 34.615 0.00 0.00 0.00 2.83
2246 5615 8.189460 ACTAGACCTTACATATCGAGAAAACAC 58.811 37.037 0.00 0.00 0.00 3.32
2247 5616 6.931838 AGACCTTACATATCGAGAAAACACA 58.068 36.000 0.00 0.00 0.00 3.72
2248 5617 7.036220 AGACCTTACATATCGAGAAAACACAG 58.964 38.462 0.00 0.00 0.00 3.66
2249 5618 5.581085 ACCTTACATATCGAGAAAACACAGC 59.419 40.000 0.00 0.00 0.00 4.40
2250 5619 5.580691 CCTTACATATCGAGAAAACACAGCA 59.419 40.000 0.00 0.00 0.00 4.41
2251 5620 4.928661 ACATATCGAGAAAACACAGCAC 57.071 40.909 0.00 0.00 0.00 4.40
2252 5621 4.569943 ACATATCGAGAAAACACAGCACT 58.430 39.130 0.00 0.00 0.00 4.40
2253 5622 4.997395 ACATATCGAGAAAACACAGCACTT 59.003 37.500 0.00 0.00 0.00 3.16
2254 5623 5.470098 ACATATCGAGAAAACACAGCACTTT 59.530 36.000 0.00 0.00 0.00 2.66
2255 5624 6.649141 ACATATCGAGAAAACACAGCACTTTA 59.351 34.615 0.00 0.00 0.00 1.85
2256 5625 7.172532 ACATATCGAGAAAACACAGCACTTTAA 59.827 33.333 0.00 0.00 0.00 1.52
2257 5626 6.560253 ATCGAGAAAACACAGCACTTTAAT 57.440 33.333 0.00 0.00 0.00 1.40
2258 5627 5.985781 TCGAGAAAACACAGCACTTTAATC 58.014 37.500 0.00 0.00 0.00 1.75
2259 5628 5.758296 TCGAGAAAACACAGCACTTTAATCT 59.242 36.000 0.00 0.00 0.00 2.40
2260 5629 5.848036 CGAGAAAACACAGCACTTTAATCTG 59.152 40.000 0.00 0.00 0.00 2.90
2261 5630 6.511767 CGAGAAAACACAGCACTTTAATCTGT 60.512 38.462 0.00 0.00 41.29 3.41
2262 5631 7.307160 CGAGAAAACACAGCACTTTAATCTGTA 60.307 37.037 0.00 0.00 38.85 2.74
2263 5632 7.639945 AGAAAACACAGCACTTTAATCTGTAC 58.360 34.615 0.00 0.00 38.85 2.90
2264 5633 6.935741 AAACACAGCACTTTAATCTGTACA 57.064 33.333 0.00 0.00 38.85 2.90
2265 5634 6.545504 AACACAGCACTTTAATCTGTACAG 57.454 37.500 17.17 17.17 38.85 2.74
2266 5635 5.611374 ACACAGCACTTTAATCTGTACAGT 58.389 37.500 21.99 6.99 38.85 3.55
2267 5636 6.755206 ACACAGCACTTTAATCTGTACAGTA 58.245 36.000 21.99 9.79 38.85 2.74
2268 5637 6.645415 ACACAGCACTTTAATCTGTACAGTAC 59.355 38.462 21.99 3.49 38.85 2.73
2269 5638 6.645003 CACAGCACTTTAATCTGTACAGTACA 59.355 38.462 21.99 12.97 38.85 2.90
2270 5639 7.170828 CACAGCACTTTAATCTGTACAGTACAA 59.829 37.037 21.99 11.31 38.85 2.41
2271 5640 7.713507 ACAGCACTTTAATCTGTACAGTACAAA 59.286 33.333 21.99 16.97 39.08 2.83
2272 5641 8.223769 CAGCACTTTAATCTGTACAGTACAAAG 58.776 37.037 26.25 26.25 38.38 2.77
2273 5642 7.015877 GCACTTTAATCTGTACAGTACAAAGC 58.984 38.462 27.00 19.10 38.38 3.51
2274 5643 7.307751 GCACTTTAATCTGTACAGTACAAAGCA 60.308 37.037 27.00 10.72 38.38 3.91
2275 5644 8.009974 CACTTTAATCTGTACAGTACAAAGCAC 58.990 37.037 27.00 0.00 38.38 4.40
2276 5645 7.931948 ACTTTAATCTGTACAGTACAAAGCACT 59.068 33.333 27.00 15.92 38.38 4.40
2277 5646 8.671384 TTTAATCTGTACAGTACAAAGCACTT 57.329 30.769 21.99 5.06 38.38 3.16
2278 5647 9.767228 TTTAATCTGTACAGTACAAAGCACTTA 57.233 29.630 21.99 0.00 38.38 2.24
2279 5648 9.767228 TTAATCTGTACAGTACAAAGCACTTAA 57.233 29.630 21.99 8.95 38.38 1.85
2280 5649 8.671384 AATCTGTACAGTACAAAGCACTTAAA 57.329 30.769 21.99 0.00 38.38 1.52
2281 5650 8.848474 ATCTGTACAGTACAAAGCACTTAAAT 57.152 30.769 21.99 0.07 38.38 1.40
2282 5651 8.306680 TCTGTACAGTACAAAGCACTTAAATC 57.693 34.615 21.99 0.00 38.38 2.17
2283 5652 8.148351 TCTGTACAGTACAAAGCACTTAAATCT 58.852 33.333 21.99 0.00 38.38 2.40
2284 5653 8.083462 TGTACAGTACAAAGCACTTAAATCTG 57.917 34.615 11.21 0.00 35.38 2.90
2285 5654 7.713507 TGTACAGTACAAAGCACTTAAATCTGT 59.286 33.333 11.21 12.31 35.38 3.41
2286 5655 9.199982 GTACAGTACAAAGCACTTAAATCTGTA 57.800 33.333 5.79 0.00 34.86 2.74
2287 5656 8.084590 ACAGTACAAAGCACTTAAATCTGTAC 57.915 34.615 11.66 11.66 38.48 2.90
2288 5657 7.713507 ACAGTACAAAGCACTTAAATCTGTACA 59.286 33.333 17.84 0.00 39.90 2.90
2289 5658 8.223769 CAGTACAAAGCACTTAAATCTGTACAG 58.776 37.037 17.17 17.17 39.90 2.74
2290 5659 7.931948 AGTACAAAGCACTTAAATCTGTACAGT 59.068 33.333 21.99 6.25 39.90 3.55
2291 5660 9.199982 GTACAAAGCACTTAAATCTGTACAGTA 57.800 33.333 21.99 9.79 38.22 2.74
2292 5661 8.084590 ACAAAGCACTTAAATCTGTACAGTAC 57.915 34.615 21.99 3.49 0.00 2.73
2293 5662 7.713507 ACAAAGCACTTAAATCTGTACAGTACA 59.286 33.333 21.99 12.97 37.13 2.90
2294 5663 8.556194 CAAAGCACTTAAATCTGTACAGTACAA 58.444 33.333 21.99 11.12 38.38 2.41
2295 5664 8.671384 AAGCACTTAAATCTGTACAGTACAAA 57.329 30.769 21.99 1.64 38.38 2.83
2296 5665 8.084590 AGCACTTAAATCTGTACAGTACAAAC 57.915 34.615 21.99 5.74 38.38 2.93
2297 5666 7.713507 AGCACTTAAATCTGTACAGTACAAACA 59.286 33.333 21.99 1.58 38.38 2.83
2298 5667 8.504005 GCACTTAAATCTGTACAGTACAAACAT 58.496 33.333 21.99 4.04 38.38 2.71
2369 5738 9.705290 AAAGAAAACATATATTTGAAAAGGCGT 57.295 25.926 0.00 0.00 0.00 5.68
2370 5739 9.705290 AAGAAAACATATATTTGAAAAGGCGTT 57.295 25.926 0.00 0.00 0.00 4.84
2371 5740 9.353999 AGAAAACATATATTTGAAAAGGCGTTC 57.646 29.630 0.00 0.00 0.00 3.95
2372 5741 9.134734 GAAAACATATATTTGAAAAGGCGTTCA 57.865 29.630 0.00 2.97 35.72 3.18
2373 5742 9.651913 AAAACATATATTTGAAAAGGCGTTCAT 57.348 25.926 7.37 0.00 37.36 2.57
2381 5750 7.397892 TTTGAAAAGGCGTTCATATAATCCA 57.602 32.000 7.37 0.00 37.36 3.41
2382 5751 7.581213 TTGAAAAGGCGTTCATATAATCCAT 57.419 32.000 7.37 0.00 37.36 3.41
2383 5752 6.969366 TGAAAAGGCGTTCATATAATCCATG 58.031 36.000 2.97 0.00 32.56 3.66
2384 5753 6.770303 TGAAAAGGCGTTCATATAATCCATGA 59.230 34.615 0.00 0.00 32.56 3.07
2385 5754 7.284261 TGAAAAGGCGTTCATATAATCCATGAA 59.716 33.333 0.00 0.00 39.48 2.57
2386 5755 7.765695 AAAGGCGTTCATATAATCCATGAAT 57.234 32.000 0.00 0.00 42.63 2.57
2387 5756 7.765695 AAGGCGTTCATATAATCCATGAATT 57.234 32.000 0.00 0.00 42.63 2.17
2388 5757 7.149569 AGGCGTTCATATAATCCATGAATTG 57.850 36.000 0.00 0.18 42.63 2.32
2389 5758 6.942005 AGGCGTTCATATAATCCATGAATTGA 59.058 34.615 0.00 0.00 42.63 2.57
2390 5759 7.448161 AGGCGTTCATATAATCCATGAATTGAA 59.552 33.333 0.00 0.00 42.63 2.69
2391 5760 8.081633 GGCGTTCATATAATCCATGAATTGAAA 58.918 33.333 0.00 0.00 42.63 2.69
2392 5761 9.121517 GCGTTCATATAATCCATGAATTGAAAG 57.878 33.333 0.00 0.00 42.63 2.62
2393 5762 9.616634 CGTTCATATAATCCATGAATTGAAAGG 57.383 33.333 0.00 0.00 42.63 3.11
2401 5770 8.837788 AATCCATGAATTGAAAGGAAAAGTTC 57.162 30.769 0.00 0.00 31.17 3.01
2402 5771 7.358770 TCCATGAATTGAAAGGAAAAGTTCA 57.641 32.000 0.00 0.00 31.99 3.18
2403 5772 7.209475 TCCATGAATTGAAAGGAAAAGTTCAC 58.791 34.615 0.00 0.00 33.58 3.18
2404 5773 6.985645 CCATGAATTGAAAGGAAAAGTTCACA 59.014 34.615 0.00 0.00 33.58 3.58
2405 5774 7.495279 CCATGAATTGAAAGGAAAAGTTCACAA 59.505 33.333 0.00 0.00 33.58 3.33
2406 5775 8.881743 CATGAATTGAAAGGAAAAGTTCACAAA 58.118 29.630 0.00 0.00 33.58 2.83
2407 5776 8.839310 TGAATTGAAAGGAAAAGTTCACAAAA 57.161 26.923 0.00 0.00 33.58 2.44
2408 5777 9.277783 TGAATTGAAAGGAAAAGTTCACAAAAA 57.722 25.926 0.00 0.00 33.58 1.94
2409 5778 9.541724 GAATTGAAAGGAAAAGTTCACAAAAAC 57.458 29.630 0.00 0.00 33.58 2.43
2410 5779 6.698359 TGAAAGGAAAAGTTCACAAAAACG 57.302 33.333 0.00 0.00 34.27 3.60
2411 5780 6.448006 TGAAAGGAAAAGTTCACAAAAACGA 58.552 32.000 0.00 0.00 34.27 3.85
2412 5781 6.924060 TGAAAGGAAAAGTTCACAAAAACGAA 59.076 30.769 0.00 0.00 34.27 3.85
2413 5782 7.438459 TGAAAGGAAAAGTTCACAAAAACGAAA 59.562 29.630 0.00 0.00 34.27 3.46
2414 5783 7.716768 AAGGAAAAGTTCACAAAAACGAAAA 57.283 28.000 0.00 0.00 34.27 2.29
2415 5784 7.716768 AGGAAAAGTTCACAAAAACGAAAAA 57.283 28.000 0.00 0.00 34.27 1.94
2416 5785 7.792925 AGGAAAAGTTCACAAAAACGAAAAAG 58.207 30.769 0.00 0.00 34.27 2.27
2417 5786 7.439955 AGGAAAAGTTCACAAAAACGAAAAAGT 59.560 29.630 0.00 0.00 34.27 2.66
2418 5787 8.065407 GGAAAAGTTCACAAAAACGAAAAAGTT 58.935 29.630 0.00 0.00 34.27 2.66
2419 5788 8.981370 AAAAGTTCACAAAAACGAAAAAGTTC 57.019 26.923 0.00 0.00 34.27 3.01
2420 5789 7.701809 AAGTTCACAAAAACGAAAAAGTTCA 57.298 28.000 0.00 0.00 34.27 3.18
2421 5790 7.883229 AGTTCACAAAAACGAAAAAGTTCAT 57.117 28.000 0.00 0.00 34.27 2.57
2422 5791 7.728895 AGTTCACAAAAACGAAAAAGTTCATG 58.271 30.769 0.00 0.00 34.27 3.07
2423 5792 7.596995 AGTTCACAAAAACGAAAAAGTTCATGA 59.403 29.630 0.00 0.00 34.27 3.07
2424 5793 7.875316 TCACAAAAACGAAAAAGTTCATGAA 57.125 28.000 3.38 3.38 32.89 2.57
2425 5794 8.472683 TCACAAAAACGAAAAAGTTCATGAAT 57.527 26.923 12.12 0.00 32.89 2.57
2426 5795 9.574458 TCACAAAAACGAAAAAGTTCATGAATA 57.426 25.926 12.12 0.00 32.89 1.75
2427 5796 9.618410 CACAAAAACGAAAAAGTTCATGAATAC 57.382 29.630 12.12 0.00 32.89 1.89
2428 5797 8.528295 ACAAAAACGAAAAAGTTCATGAATACG 58.472 29.630 12.12 12.71 32.89 3.06
2429 5798 8.738554 CAAAAACGAAAAAGTTCATGAATACGA 58.261 29.630 12.12 0.00 32.89 3.43
2430 5799 8.844441 AAAACGAAAAAGTTCATGAATACGAA 57.156 26.923 12.12 0.00 32.89 3.85
2431 5800 8.844441 AAACGAAAAAGTTCATGAATACGAAA 57.156 26.923 12.12 0.00 32.89 3.46
2432 5801 8.844441 AACGAAAAAGTTCATGAATACGAAAA 57.156 26.923 12.12 0.00 32.89 2.29
2433 5802 8.844441 ACGAAAAAGTTCATGAATACGAAAAA 57.156 26.923 12.12 0.00 32.89 1.94
2485 5854 9.597170 TCATCAAACTTGAAAAATTGTTCATCA 57.403 25.926 11.86 0.00 41.13 3.07
2526 5895 7.769272 TCATGGAATTTGAACAAAGTTCAAC 57.231 32.000 21.04 12.35 37.41 3.18
2527 5896 6.475076 TCATGGAATTTGAACAAAGTTCAACG 59.525 34.615 21.04 7.35 37.41 4.10
2528 5897 5.955488 TGGAATTTGAACAAAGTTCAACGA 58.045 33.333 21.04 10.96 38.05 3.85
2529 5898 6.390721 TGGAATTTGAACAAAGTTCAACGAA 58.609 32.000 21.04 10.36 38.05 3.85
2530 5899 7.038659 TGGAATTTGAACAAAGTTCAACGAAT 58.961 30.769 21.04 11.89 38.05 3.34
2531 5900 7.547370 TGGAATTTGAACAAAGTTCAACGAATT 59.453 29.630 21.04 17.88 38.05 2.17
2532 5901 8.387354 GGAATTTGAACAAAGTTCAACGAATTT 58.613 29.630 21.04 11.79 38.05 1.82
2533 5902 9.198065 GAATTTGAACAAAGTTCAACGAATTTG 57.802 29.630 21.04 1.85 38.05 2.32
2534 5903 7.875316 TTTGAACAAAGTTCAACGAATTTGA 57.125 28.000 21.04 5.36 42.83 2.69
2535 5904 8.930760 ATTTGAACAAAGTTCAACGAATTTGAA 58.069 25.926 21.04 7.35 41.28 2.69
2697 6066 2.296073 AAAACCCCACGCAATAAGGA 57.704 45.000 0.00 0.00 0.00 3.36
2698 6067 2.296073 AAACCCCACGCAATAAGGAA 57.704 45.000 0.00 0.00 0.00 3.36
2699 6068 2.296073 AACCCCACGCAATAAGGAAA 57.704 45.000 0.00 0.00 0.00 3.13
2700 6069 2.296073 ACCCCACGCAATAAGGAAAA 57.704 45.000 0.00 0.00 0.00 2.29
2701 6070 1.890489 ACCCCACGCAATAAGGAAAAC 59.110 47.619 0.00 0.00 0.00 2.43
2702 6071 1.889829 CCCCACGCAATAAGGAAAACA 59.110 47.619 0.00 0.00 0.00 2.83
2703 6072 2.297597 CCCCACGCAATAAGGAAAACAA 59.702 45.455 0.00 0.00 0.00 2.83
2704 6073 3.243907 CCCCACGCAATAAGGAAAACAAA 60.244 43.478 0.00 0.00 0.00 2.83
2705 6074 4.562552 CCCCACGCAATAAGGAAAACAAAT 60.563 41.667 0.00 0.00 0.00 2.32
2706 6075 4.994217 CCCACGCAATAAGGAAAACAAATT 59.006 37.500 0.00 0.00 0.00 1.82
2707 6076 6.159988 CCCACGCAATAAGGAAAACAAATTA 58.840 36.000 0.00 0.00 0.00 1.40
2708 6077 6.647067 CCCACGCAATAAGGAAAACAAATTAA 59.353 34.615 0.00 0.00 0.00 1.40
2709 6078 7.171678 CCCACGCAATAAGGAAAACAAATTAAA 59.828 33.333 0.00 0.00 0.00 1.52
2710 6079 8.716909 CCACGCAATAAGGAAAACAAATTAAAT 58.283 29.630 0.00 0.00 0.00 1.40
2711 6080 9.527566 CACGCAATAAGGAAAACAAATTAAATG 57.472 29.630 0.00 0.00 0.00 2.32
2712 6081 9.482627 ACGCAATAAGGAAAACAAATTAAATGA 57.517 25.926 0.00 0.00 0.00 2.57
2713 6082 9.956797 CGCAATAAGGAAAACAAATTAAATGAG 57.043 29.630 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
180 203 6.575083 TGTACTAGTATCTCGTAACGTGTC 57.425 41.667 5.75 0.00 0.00 3.67
244 267 2.035442 GGGGAGCAAGAACGAGCAC 61.035 63.158 0.00 0.00 0.00 4.40
261 284 1.365633 GTAGGAGCTGCCGAGATGG 59.634 63.158 0.00 0.00 43.43 3.51
318 341 0.896479 TGGACTCATGGGACGAACGA 60.896 55.000 0.00 0.00 0.00 3.85
381 404 8.727910 AGCAAGCACATGAAGATATATACAATG 58.272 33.333 0.00 0.00 0.00 2.82
383 406 8.152898 AGAGCAAGCACATGAAGATATATACAA 58.847 33.333 0.00 0.00 0.00 2.41
384 407 7.674120 AGAGCAAGCACATGAAGATATATACA 58.326 34.615 0.00 0.00 0.00 2.29
389 412 7.718314 TCATAAAGAGCAAGCACATGAAGATAT 59.282 33.333 0.00 0.00 0.00 1.63
399 426 5.741040 GCAACTTATCATAAAGAGCAAGCAC 59.259 40.000 0.00 0.00 33.97 4.40
400 427 5.649395 AGCAACTTATCATAAAGAGCAAGCA 59.351 36.000 0.00 0.00 35.22 3.91
401 428 5.970023 CAGCAACTTATCATAAAGAGCAAGC 59.030 40.000 0.00 0.00 35.22 4.01
402 429 7.065563 AGTCAGCAACTTATCATAAAGAGCAAG 59.934 37.037 0.00 0.00 33.03 4.01
415 459 5.012148 AGGTGTAGACAAGTCAGCAACTTAT 59.988 40.000 2.72 0.00 46.69 1.73
423 467 3.062763 CTGCAAGGTGTAGACAAGTCAG 58.937 50.000 2.72 0.00 31.36 3.51
470 600 2.879070 CTCAGCCGATGCGTGATGC 61.879 63.158 0.00 0.00 44.33 3.91
471 601 2.879070 GCTCAGCCGATGCGTGATG 61.879 63.158 0.00 0.00 44.33 3.07
472 602 2.587194 GCTCAGCCGATGCGTGAT 60.587 61.111 0.00 0.00 44.33 3.06
473 603 4.819761 GGCTCAGCCGATGCGTGA 62.820 66.667 0.00 0.00 44.33 4.35
634 764 1.594833 CGTCCGGAAGATCCACCAA 59.405 57.895 12.53 0.00 35.91 3.67
681 811 2.678934 TTCTGCGCCGGAGTACCT 60.679 61.111 5.05 0.00 0.00 3.08
848 984 0.036306 CAACGGGTAAAGGGACAGCT 59.964 55.000 0.00 0.00 0.00 4.24
849 985 1.583495 GCAACGGGTAAAGGGACAGC 61.583 60.000 0.00 0.00 0.00 4.40
850 986 0.036306 AGCAACGGGTAAAGGGACAG 59.964 55.000 0.00 0.00 0.00 3.51
851 987 0.035739 GAGCAACGGGTAAAGGGACA 59.964 55.000 0.00 0.00 0.00 4.02
852 988 0.675837 GGAGCAACGGGTAAAGGGAC 60.676 60.000 0.00 0.00 0.00 4.46
853 989 1.128809 TGGAGCAACGGGTAAAGGGA 61.129 55.000 0.00 0.00 0.00 4.20
1000 1136 6.131264 TCATTATCTCCATGCAAAGGAACAT 58.869 36.000 11.83 9.34 34.08 2.71
1001 1137 5.508567 TCATTATCTCCATGCAAAGGAACA 58.491 37.500 11.83 3.24 34.08 3.18
1002 1138 5.506982 GCTCATTATCTCCATGCAAAGGAAC 60.507 44.000 11.83 0.00 34.08 3.62
1003 1139 4.581824 GCTCATTATCTCCATGCAAAGGAA 59.418 41.667 11.83 4.83 34.08 3.36
1004 1140 4.139786 GCTCATTATCTCCATGCAAAGGA 58.860 43.478 10.47 10.47 0.00 3.36
1005 1141 3.058432 CGCTCATTATCTCCATGCAAAGG 60.058 47.826 0.00 0.00 0.00 3.11
1006 1142 3.811497 TCGCTCATTATCTCCATGCAAAG 59.189 43.478 0.00 0.00 0.00 2.77
1007 1143 3.807553 TCGCTCATTATCTCCATGCAAA 58.192 40.909 0.00 0.00 0.00 3.68
1008 1144 3.396560 CTCGCTCATTATCTCCATGCAA 58.603 45.455 0.00 0.00 0.00 4.08
1009 1145 2.289257 CCTCGCTCATTATCTCCATGCA 60.289 50.000 0.00 0.00 0.00 3.96
1010 1146 2.289320 ACCTCGCTCATTATCTCCATGC 60.289 50.000 0.00 0.00 0.00 4.06
1011 1147 3.324117 CACCTCGCTCATTATCTCCATG 58.676 50.000 0.00 0.00 0.00 3.66
1012 1148 2.289320 GCACCTCGCTCATTATCTCCAT 60.289 50.000 0.00 0.00 37.77 3.41
1013 1149 1.069204 GCACCTCGCTCATTATCTCCA 59.931 52.381 0.00 0.00 37.77 3.86
1014 1150 1.606737 GGCACCTCGCTCATTATCTCC 60.607 57.143 0.00 0.00 41.91 3.71
1015 1151 1.789506 GGCACCTCGCTCATTATCTC 58.210 55.000 0.00 0.00 41.91 2.75
1016 1152 0.032678 CGGCACCTCGCTCATTATCT 59.967 55.000 0.00 0.00 41.91 1.98
1017 1153 0.032130 TCGGCACCTCGCTCATTATC 59.968 55.000 0.00 0.00 41.91 1.75
1018 1154 0.249489 GTCGGCACCTCGCTCATTAT 60.249 55.000 0.00 0.00 41.91 1.28
1019 1155 1.141019 GTCGGCACCTCGCTCATTA 59.859 57.895 0.00 0.00 41.91 1.90
1020 1156 2.125512 GTCGGCACCTCGCTCATT 60.126 61.111 0.00 0.00 41.91 2.57
1143 1279 4.787280 CCCTGGGACTCGGAGCCT 62.787 72.222 7.01 0.00 0.00 4.58
1147 1283 2.683933 GAAGCCCTGGGACTCGGA 60.684 66.667 19.27 0.00 0.00 4.55
1205 1341 0.036388 CAGGGTGGCGTAACTCACAT 60.036 55.000 0.00 0.00 35.74 3.21
1212 1354 2.031919 CTGTGCAGGGTGGCGTAA 59.968 61.111 0.00 0.00 36.28 3.18
1272 1414 4.201679 CCGCCGATACTCACGCCA 62.202 66.667 0.00 0.00 0.00 5.69
1405 1547 4.633126 CACCTTGTAACTGATCATCCACAG 59.367 45.833 0.00 0.00 39.65 3.66
1415 1557 1.302192 GGCGCCACCTTGTAACTGA 60.302 57.895 24.80 0.00 34.51 3.41
1830 1976 1.380524 ATCTAGCTAGTGACGTGCGT 58.619 50.000 20.10 0.00 0.00 5.24
1832 1978 4.452795 TCATCTATCTAGCTAGTGACGTGC 59.547 45.833 20.10 0.00 0.00 5.34
1835 1981 5.645929 ACCATCATCTATCTAGCTAGTGACG 59.354 44.000 20.10 8.74 0.00 4.35
1864 2010 8.661345 ACTCTTCTGGGTCTTATTTTTCTTACT 58.339 33.333 0.00 0.00 0.00 2.24
1865 2011 8.850007 ACTCTTCTGGGTCTTATTTTTCTTAC 57.150 34.615 0.00 0.00 0.00 2.34
1866 2012 7.817962 CGACTCTTCTGGGTCTTATTTTTCTTA 59.182 37.037 0.00 0.00 0.00 2.10
1867 2013 6.651225 CGACTCTTCTGGGTCTTATTTTTCTT 59.349 38.462 0.00 0.00 0.00 2.52
1868 2014 6.166982 CGACTCTTCTGGGTCTTATTTTTCT 58.833 40.000 0.00 0.00 0.00 2.52
1869 2015 5.163844 GCGACTCTTCTGGGTCTTATTTTTC 60.164 44.000 0.00 0.00 0.00 2.29
1881 2027 0.534412 ATCACCTGCGACTCTTCTGG 59.466 55.000 0.00 0.00 0.00 3.86
1930 2076 0.536233 TCAGCTAGCTAGGCGGAGAG 60.536 60.000 18.86 1.34 34.52 3.20
1931 2077 0.111446 ATCAGCTAGCTAGGCGGAGA 59.889 55.000 18.86 9.10 37.33 3.71
1932 2078 0.243365 CATCAGCTAGCTAGGCGGAG 59.757 60.000 18.86 2.97 37.33 4.63
1933 2079 1.181741 CCATCAGCTAGCTAGGCGGA 61.182 60.000 18.86 18.45 38.15 5.54
1934 2080 1.181741 TCCATCAGCTAGCTAGGCGG 61.182 60.000 18.86 15.26 34.52 6.13
1935 2081 0.894141 ATCCATCAGCTAGCTAGGCG 59.106 55.000 18.86 5.05 34.52 5.52
1936 2082 3.678529 GCTTATCCATCAGCTAGCTAGGC 60.679 52.174 18.86 8.38 32.87 3.93
1968 2115 3.797256 CGAGGCAGCATAACACTAACTAC 59.203 47.826 0.00 0.00 0.00 2.73
2096 5465 6.638468 CCTTTCAGCTTGTGTTCAACTTAATC 59.362 38.462 0.00 0.00 0.00 1.75
2105 5474 0.315251 GGCCCTTTCAGCTTGTGTTC 59.685 55.000 0.00 0.00 0.00 3.18
2113 5482 1.047801 TTTTTCAGGGCCCTTTCAGC 58.952 50.000 26.10 0.00 0.00 4.26
2136 5505 2.350522 CGGTCTAGCAAACAAGCATCT 58.649 47.619 0.00 0.00 36.85 2.90
2137 5506 1.202076 GCGGTCTAGCAAACAAGCATC 60.202 52.381 0.00 0.00 36.85 3.91
2138 5507 0.804989 GCGGTCTAGCAAACAAGCAT 59.195 50.000 0.00 0.00 36.85 3.79
2175 5544 9.056005 CCGATGAACTTTTGAAATAGATATGGA 57.944 33.333 0.00 0.00 0.00 3.41
2176 5545 9.056005 TCCGATGAACTTTTGAAATAGATATGG 57.944 33.333 0.00 0.00 0.00 2.74
2177 5546 9.869844 GTCCGATGAACTTTTGAAATAGATATG 57.130 33.333 0.00 0.00 0.00 1.78
2178 5547 9.057089 GGTCCGATGAACTTTTGAAATAGATAT 57.943 33.333 0.00 0.00 0.00 1.63
2179 5548 8.044309 TGGTCCGATGAACTTTTGAAATAGATA 58.956 33.333 0.00 0.00 0.00 1.98
2180 5549 6.884295 TGGTCCGATGAACTTTTGAAATAGAT 59.116 34.615 0.00 0.00 0.00 1.98
2181 5550 6.148811 GTGGTCCGATGAACTTTTGAAATAGA 59.851 38.462 0.00 0.00 0.00 1.98
2182 5551 6.149474 AGTGGTCCGATGAACTTTTGAAATAG 59.851 38.462 0.00 0.00 0.00 1.73
2183 5552 6.001460 AGTGGTCCGATGAACTTTTGAAATA 58.999 36.000 0.00 0.00 0.00 1.40
2184 5553 4.827284 AGTGGTCCGATGAACTTTTGAAAT 59.173 37.500 0.00 0.00 0.00 2.17
2185 5554 4.204012 AGTGGTCCGATGAACTTTTGAAA 58.796 39.130 0.00 0.00 0.00 2.69
2186 5555 3.815809 AGTGGTCCGATGAACTTTTGAA 58.184 40.909 0.00 0.00 0.00 2.69
2187 5556 3.485463 AGTGGTCCGATGAACTTTTGA 57.515 42.857 0.00 0.00 0.00 2.69
2188 5557 3.435671 GGTAGTGGTCCGATGAACTTTTG 59.564 47.826 0.00 0.00 0.00 2.44
2189 5558 3.671716 GGTAGTGGTCCGATGAACTTTT 58.328 45.455 0.00 0.00 0.00 2.27
2190 5559 3.329929 GGTAGTGGTCCGATGAACTTT 57.670 47.619 0.00 0.00 0.00 2.66
2204 5573 0.108992 TAGTTCTTGCCGCGGTAGTG 60.109 55.000 28.70 18.58 0.00 2.74
2205 5574 0.172803 CTAGTTCTTGCCGCGGTAGT 59.827 55.000 28.70 12.22 0.00 2.73
2206 5575 0.454600 TCTAGTTCTTGCCGCGGTAG 59.545 55.000 28.70 23.32 0.00 3.18
2207 5576 0.171903 GTCTAGTTCTTGCCGCGGTA 59.828 55.000 28.70 21.83 0.00 4.02
2208 5577 1.080025 GTCTAGTTCTTGCCGCGGT 60.080 57.895 28.70 7.28 0.00 5.68
2209 5578 1.810030 GGTCTAGTTCTTGCCGCGG 60.810 63.158 24.05 24.05 0.00 6.46
2210 5579 0.389948 AAGGTCTAGTTCTTGCCGCG 60.390 55.000 0.00 0.00 0.00 6.46
2211 5580 2.269172 GTAAGGTCTAGTTCTTGCCGC 58.731 52.381 9.47 0.00 0.00 6.53
2212 5581 3.587797 TGTAAGGTCTAGTTCTTGCCG 57.412 47.619 9.47 0.00 0.00 5.69
2213 5582 5.921408 CGATATGTAAGGTCTAGTTCTTGCC 59.079 44.000 9.47 0.00 0.00 4.52
2214 5583 6.736123 TCGATATGTAAGGTCTAGTTCTTGC 58.264 40.000 9.47 8.81 0.00 4.01
2215 5584 8.155821 TCTCGATATGTAAGGTCTAGTTCTTG 57.844 38.462 9.47 0.00 0.00 3.02
2216 5585 8.749026 TTCTCGATATGTAAGGTCTAGTTCTT 57.251 34.615 0.00 0.00 0.00 2.52
2217 5586 8.749026 TTTCTCGATATGTAAGGTCTAGTTCT 57.251 34.615 0.00 0.00 0.00 3.01
2218 5587 9.235537 GTTTTCTCGATATGTAAGGTCTAGTTC 57.764 37.037 0.00 0.00 0.00 3.01
2219 5588 8.746530 TGTTTTCTCGATATGTAAGGTCTAGTT 58.253 33.333 0.00 0.00 0.00 2.24
2220 5589 8.189460 GTGTTTTCTCGATATGTAAGGTCTAGT 58.811 37.037 0.00 0.00 0.00 2.57
2221 5590 8.188799 TGTGTTTTCTCGATATGTAAGGTCTAG 58.811 37.037 0.00 0.00 0.00 2.43
2222 5591 8.058667 TGTGTTTTCTCGATATGTAAGGTCTA 57.941 34.615 0.00 0.00 0.00 2.59
2223 5592 6.931838 TGTGTTTTCTCGATATGTAAGGTCT 58.068 36.000 0.00 0.00 0.00 3.85
2224 5593 6.237861 GCTGTGTTTTCTCGATATGTAAGGTC 60.238 42.308 0.00 0.00 0.00 3.85
2225 5594 5.581085 GCTGTGTTTTCTCGATATGTAAGGT 59.419 40.000 0.00 0.00 0.00 3.50
2226 5595 5.580691 TGCTGTGTTTTCTCGATATGTAAGG 59.419 40.000 0.00 0.00 0.00 2.69
2227 5596 6.311445 AGTGCTGTGTTTTCTCGATATGTAAG 59.689 38.462 0.00 0.00 0.00 2.34
2228 5597 6.163476 AGTGCTGTGTTTTCTCGATATGTAA 58.837 36.000 0.00 0.00 0.00 2.41
2229 5598 5.720202 AGTGCTGTGTTTTCTCGATATGTA 58.280 37.500 0.00 0.00 0.00 2.29
2230 5599 4.569943 AGTGCTGTGTTTTCTCGATATGT 58.430 39.130 0.00 0.00 0.00 2.29
2231 5600 5.536554 AAGTGCTGTGTTTTCTCGATATG 57.463 39.130 0.00 0.00 0.00 1.78
2232 5601 7.667043 TTAAAGTGCTGTGTTTTCTCGATAT 57.333 32.000 0.00 0.00 0.00 1.63
2233 5602 7.602644 AGATTAAAGTGCTGTGTTTTCTCGATA 59.397 33.333 0.00 0.00 0.00 2.92
2234 5603 6.428159 AGATTAAAGTGCTGTGTTTTCTCGAT 59.572 34.615 0.00 0.00 0.00 3.59
2235 5604 5.758296 AGATTAAAGTGCTGTGTTTTCTCGA 59.242 36.000 0.00 0.00 0.00 4.04
2236 5605 5.848036 CAGATTAAAGTGCTGTGTTTTCTCG 59.152 40.000 0.00 0.00 0.00 4.04
2237 5606 6.729187 ACAGATTAAAGTGCTGTGTTTTCTC 58.271 36.000 0.00 0.00 41.02 2.87
2238 5607 6.699575 ACAGATTAAAGTGCTGTGTTTTCT 57.300 33.333 0.00 0.00 41.02 2.52
2239 5608 7.414436 TGTACAGATTAAAGTGCTGTGTTTTC 58.586 34.615 0.00 0.00 42.38 2.29
2240 5609 7.067008 ACTGTACAGATTAAAGTGCTGTGTTTT 59.933 33.333 29.30 0.00 42.38 2.43
2241 5610 6.542370 ACTGTACAGATTAAAGTGCTGTGTTT 59.458 34.615 29.30 0.00 42.38 2.83
2242 5611 6.055588 ACTGTACAGATTAAAGTGCTGTGTT 58.944 36.000 29.30 0.00 42.38 3.32
2243 5612 5.611374 ACTGTACAGATTAAAGTGCTGTGT 58.389 37.500 29.30 0.00 42.38 3.72
2244 5613 6.645003 TGTACTGTACAGATTAAAGTGCTGTG 59.355 38.462 29.30 0.00 42.38 3.66
2245 5614 6.755206 TGTACTGTACAGATTAAAGTGCTGT 58.245 36.000 29.30 5.37 44.38 4.40
2246 5615 7.652300 TTGTACTGTACAGATTAAAGTGCTG 57.348 36.000 29.30 0.00 40.24 4.41
2247 5616 7.095187 GCTTTGTACTGTACAGATTAAAGTGCT 60.095 37.037 29.30 5.24 40.24 4.40
2248 5617 7.015877 GCTTTGTACTGTACAGATTAAAGTGC 58.984 38.462 29.30 18.87 40.24 4.40
2249 5618 8.009974 GTGCTTTGTACTGTACAGATTAAAGTG 58.990 37.037 29.30 14.45 40.24 3.16
2250 5619 7.931948 AGTGCTTTGTACTGTACAGATTAAAGT 59.068 33.333 29.30 14.73 40.24 2.66
2251 5620 8.311650 AGTGCTTTGTACTGTACAGATTAAAG 57.688 34.615 29.30 27.77 40.24 1.85
2252 5621 8.671384 AAGTGCTTTGTACTGTACAGATTAAA 57.329 30.769 29.30 21.21 40.24 1.52
2253 5622 9.767228 TTAAGTGCTTTGTACTGTACAGATTAA 57.233 29.630 29.30 16.14 40.24 1.40
2254 5623 9.767228 TTTAAGTGCTTTGTACTGTACAGATTA 57.233 29.630 29.30 9.46 40.24 1.75
2255 5624 8.671384 TTTAAGTGCTTTGTACTGTACAGATT 57.329 30.769 29.30 10.53 40.24 2.40
2256 5625 8.848474 ATTTAAGTGCTTTGTACTGTACAGAT 57.152 30.769 29.30 15.29 40.24 2.90
2257 5626 8.148351 AGATTTAAGTGCTTTGTACTGTACAGA 58.852 33.333 29.30 14.57 40.24 3.41
2258 5627 8.223769 CAGATTTAAGTGCTTTGTACTGTACAG 58.776 37.037 21.44 21.44 40.24 2.74
2259 5628 7.713507 ACAGATTTAAGTGCTTTGTACTGTACA 59.286 33.333 16.26 16.26 34.01 2.90
2260 5629 8.084590 ACAGATTTAAGTGCTTTGTACTGTAC 57.915 34.615 10.98 10.98 34.01 2.90
2261 5630 9.199982 GTACAGATTTAAGTGCTTTGTACTGTA 57.800 33.333 12.77 0.00 37.49 2.74
2262 5631 7.713507 TGTACAGATTTAAGTGCTTTGTACTGT 59.286 33.333 17.41 15.55 39.81 3.55
2263 5632 8.083462 TGTACAGATTTAAGTGCTTTGTACTG 57.917 34.615 17.41 12.33 39.81 2.74
2264 5633 7.931948 ACTGTACAGATTTAAGTGCTTTGTACT 59.068 33.333 29.30 0.00 39.81 2.73
2265 5634 8.084590 ACTGTACAGATTTAAGTGCTTTGTAC 57.915 34.615 29.30 12.99 39.65 2.90
2266 5635 9.199982 GTACTGTACAGATTTAAGTGCTTTGTA 57.800 33.333 29.30 3.27 0.00 2.41
2267 5636 7.713507 TGTACTGTACAGATTTAAGTGCTTTGT 59.286 33.333 29.30 4.27 34.06 2.83
2268 5637 8.083462 TGTACTGTACAGATTTAAGTGCTTTG 57.917 34.615 29.30 0.00 34.06 2.77
2269 5638 8.671384 TTGTACTGTACAGATTTAAGTGCTTT 57.329 30.769 29.30 4.50 40.24 3.51
2270 5639 8.557029 GTTTGTACTGTACAGATTTAAGTGCTT 58.443 33.333 29.30 4.71 40.24 3.91
2271 5640 7.713507 TGTTTGTACTGTACAGATTTAAGTGCT 59.286 33.333 29.30 5.24 40.24 4.40
2272 5641 7.857569 TGTTTGTACTGTACAGATTTAAGTGC 58.142 34.615 29.30 9.81 40.24 4.40
2343 5712 9.705290 ACGCCTTTTCAAATATATGTTTTCTTT 57.295 25.926 0.00 0.00 0.00 2.52
2344 5713 9.705290 AACGCCTTTTCAAATATATGTTTTCTT 57.295 25.926 0.00 0.00 0.00 2.52
2345 5714 9.353999 GAACGCCTTTTCAAATATATGTTTTCT 57.646 29.630 0.00 0.00 0.00 2.52
2346 5715 9.134734 TGAACGCCTTTTCAAATATATGTTTTC 57.865 29.630 0.00 0.00 32.42 2.29
2347 5716 9.651913 ATGAACGCCTTTTCAAATATATGTTTT 57.348 25.926 0.00 0.00 38.95 2.43
2355 5724 9.126151 TGGATTATATGAACGCCTTTTCAAATA 57.874 29.630 0.00 0.00 38.95 1.40
2356 5725 8.006298 TGGATTATATGAACGCCTTTTCAAAT 57.994 30.769 0.00 0.00 38.95 2.32
2357 5726 7.397892 TGGATTATATGAACGCCTTTTCAAA 57.602 32.000 0.00 0.00 38.95 2.69
2358 5727 7.284261 TCATGGATTATATGAACGCCTTTTCAA 59.716 33.333 0.00 0.00 38.95 2.69
2359 5728 6.770303 TCATGGATTATATGAACGCCTTTTCA 59.230 34.615 0.00 0.00 39.79 2.69
2360 5729 7.202016 TCATGGATTATATGAACGCCTTTTC 57.798 36.000 0.00 0.00 31.98 2.29
2361 5730 7.581213 TTCATGGATTATATGAACGCCTTTT 57.419 32.000 0.00 0.00 39.05 2.27
2362 5731 7.765695 ATTCATGGATTATATGAACGCCTTT 57.234 32.000 0.00 0.00 44.57 3.11
2363 5732 7.448161 TCAATTCATGGATTATATGAACGCCTT 59.552 33.333 0.00 0.00 44.57 4.35
2364 5733 6.942005 TCAATTCATGGATTATATGAACGCCT 59.058 34.615 0.00 0.00 44.57 5.52
2365 5734 7.144722 TCAATTCATGGATTATATGAACGCC 57.855 36.000 0.00 0.00 44.57 5.68
2366 5735 9.121517 CTTTCAATTCATGGATTATATGAACGC 57.878 33.333 0.00 0.00 44.57 4.84
2367 5736 9.616634 CCTTTCAATTCATGGATTATATGAACG 57.383 33.333 0.00 0.00 44.57 3.95
2375 5744 9.927668 GAACTTTTCCTTTCAATTCATGGATTA 57.072 29.630 0.00 0.00 0.00 1.75
2376 5745 8.431222 TGAACTTTTCCTTTCAATTCATGGATT 58.569 29.630 0.00 0.00 0.00 3.01
2377 5746 7.874528 GTGAACTTTTCCTTTCAATTCATGGAT 59.125 33.333 0.00 0.00 33.58 3.41
2378 5747 7.147759 TGTGAACTTTTCCTTTCAATTCATGGA 60.148 33.333 0.00 0.00 33.58 3.41
2379 5748 6.985645 TGTGAACTTTTCCTTTCAATTCATGG 59.014 34.615 0.00 0.00 33.58 3.66
2380 5749 8.422973 TTGTGAACTTTTCCTTTCAATTCATG 57.577 30.769 0.00 0.00 33.58 3.07
2381 5750 9.447157 TTTTGTGAACTTTTCCTTTCAATTCAT 57.553 25.926 0.00 0.00 33.58 2.57
2382 5751 8.839310 TTTTGTGAACTTTTCCTTTCAATTCA 57.161 26.923 0.00 0.00 33.58 2.57
2383 5752 9.541724 GTTTTTGTGAACTTTTCCTTTCAATTC 57.458 29.630 0.00 0.00 33.58 2.17
2384 5753 8.227119 CGTTTTTGTGAACTTTTCCTTTCAATT 58.773 29.630 0.00 0.00 33.58 2.32
2385 5754 7.600752 TCGTTTTTGTGAACTTTTCCTTTCAAT 59.399 29.630 0.00 0.00 33.58 2.57
2386 5755 6.924060 TCGTTTTTGTGAACTTTTCCTTTCAA 59.076 30.769 0.00 0.00 33.58 2.69
2387 5756 6.448006 TCGTTTTTGTGAACTTTTCCTTTCA 58.552 32.000 0.00 0.00 0.00 2.69
2388 5757 6.937886 TCGTTTTTGTGAACTTTTCCTTTC 57.062 33.333 0.00 0.00 0.00 2.62
2389 5758 7.716768 TTTCGTTTTTGTGAACTTTTCCTTT 57.283 28.000 0.00 0.00 0.00 3.11
2390 5759 7.716768 TTTTCGTTTTTGTGAACTTTTCCTT 57.283 28.000 0.00 0.00 0.00 3.36
2391 5760 7.439955 ACTTTTTCGTTTTTGTGAACTTTTCCT 59.560 29.630 0.00 0.00 0.00 3.36
2392 5761 7.569297 ACTTTTTCGTTTTTGTGAACTTTTCC 58.431 30.769 0.00 0.00 0.00 3.13
2393 5762 8.981370 AACTTTTTCGTTTTTGTGAACTTTTC 57.019 26.923 0.00 0.00 0.00 2.29
2394 5763 8.604890 TGAACTTTTTCGTTTTTGTGAACTTTT 58.395 25.926 0.00 0.00 34.04 2.27
2395 5764 8.132604 TGAACTTTTTCGTTTTTGTGAACTTT 57.867 26.923 0.00 0.00 34.04 2.66
2396 5765 7.701809 TGAACTTTTTCGTTTTTGTGAACTT 57.298 28.000 0.00 0.00 34.04 2.66
2397 5766 7.596995 TCATGAACTTTTTCGTTTTTGTGAACT 59.403 29.630 0.00 0.00 34.04 3.01
2398 5767 7.725142 TCATGAACTTTTTCGTTTTTGTGAAC 58.275 30.769 0.00 0.00 34.04 3.18
2399 5768 7.875316 TCATGAACTTTTTCGTTTTTGTGAA 57.125 28.000 0.00 0.00 34.04 3.18
2400 5769 7.875316 TTCATGAACTTTTTCGTTTTTGTGA 57.125 28.000 3.38 0.00 34.04 3.58
2401 5770 9.618410 GTATTCATGAACTTTTTCGTTTTTGTG 57.382 29.630 11.07 0.00 34.04 3.33
2402 5771 8.528295 CGTATTCATGAACTTTTTCGTTTTTGT 58.472 29.630 11.07 0.00 34.04 2.83
2403 5772 8.738554 TCGTATTCATGAACTTTTTCGTTTTTG 58.261 29.630 11.07 0.00 34.04 2.44
2404 5773 8.844441 TCGTATTCATGAACTTTTTCGTTTTT 57.156 26.923 11.07 0.00 34.04 1.94
2405 5774 8.844441 TTCGTATTCATGAACTTTTTCGTTTT 57.156 26.923 11.07 0.00 34.04 2.43
2406 5775 8.844441 TTTCGTATTCATGAACTTTTTCGTTT 57.156 26.923 11.07 0.00 34.04 3.60
2407 5776 8.844441 TTTTCGTATTCATGAACTTTTTCGTT 57.156 26.923 11.07 0.00 34.04 3.85
2408 5777 8.844441 TTTTTCGTATTCATGAACTTTTTCGT 57.156 26.923 11.07 0.00 34.04 3.85
2459 5828 9.597170 TGATGAACAATTTTTCAAGTTTGATGA 57.403 25.926 10.87 0.00 38.95 2.92
2501 5870 7.009999 CGTTGAACTTTGTTCAAATTCCATGAA 59.990 33.333 22.19 0.18 39.76 2.57
2502 5871 6.475076 CGTTGAACTTTGTTCAAATTCCATGA 59.525 34.615 22.19 0.80 39.76 3.07
2503 5872 6.475076 TCGTTGAACTTTGTTCAAATTCCATG 59.525 34.615 22.19 9.39 39.76 3.66
2504 5873 6.568869 TCGTTGAACTTTGTTCAAATTCCAT 58.431 32.000 22.19 0.00 39.76 3.41
2505 5874 5.955488 TCGTTGAACTTTGTTCAAATTCCA 58.045 33.333 22.19 2.65 39.76 3.53
2506 5875 6.879188 TTCGTTGAACTTTGTTCAAATTCC 57.121 33.333 22.19 12.15 39.76 3.01
2507 5876 9.198065 CAAATTCGTTGAACTTTGTTCAAATTC 57.802 29.630 22.19 12.42 39.76 2.17
2508 5877 8.930760 TCAAATTCGTTGAACTTTGTTCAAATT 58.069 25.926 22.19 16.66 43.43 1.82
2509 5878 8.472683 TCAAATTCGTTGAACTTTGTTCAAAT 57.527 26.923 22.19 12.79 43.43 2.32
2510 5879 7.875316 TCAAATTCGTTGAACTTTGTTCAAA 57.125 28.000 22.19 11.37 43.43 2.69
2642 6011 9.726232 GAACTTTTTCGTTAAATAAGTGAACCT 57.274 29.630 0.00 0.00 31.87 3.50
2643 6012 9.505995 TGAACTTTTTCGTTAAATAAGTGAACC 57.494 29.630 0.00 0.00 34.04 3.62
2679 6048 2.296073 TTCCTTATTGCGTGGGGTTT 57.704 45.000 0.00 0.00 0.00 3.27
2680 6049 2.296073 TTTCCTTATTGCGTGGGGTT 57.704 45.000 0.00 0.00 0.00 4.11
2682 6051 1.889829 TGTTTTCCTTATTGCGTGGGG 59.110 47.619 0.00 0.00 0.00 4.96
2684 6053 7.644986 TTAATTTGTTTTCCTTATTGCGTGG 57.355 32.000 0.00 0.00 0.00 4.94
2685 6054 9.527566 CATTTAATTTGTTTTCCTTATTGCGTG 57.472 29.630 0.00 0.00 0.00 5.34
2687 6056 9.956797 CTCATTTAATTTGTTTTCCTTATTGCG 57.043 29.630 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.