Multiple sequence alignment - TraesCS7B01G127900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G127900 chr7B 100.000 6941 0 0 1 6941 153322882 153329822 0.000000e+00 12818.0
1 TraesCS7B01G127900 chr7D 92.707 3990 202 43 1 3963 184095978 184099905 0.000000e+00 5674.0
2 TraesCS7B01G127900 chr7D 91.534 2894 139 35 4089 6941 184099979 184102807 0.000000e+00 3890.0
3 TraesCS7B01G127900 chr7D 83.450 429 57 4 6511 6935 29869534 29869116 3.040000e-103 387.0
4 TraesCS7B01G127900 chr7D 91.176 102 7 2 3955 4055 131468458 131468358 3.380000e-28 137.0
5 TraesCS7B01G127900 chr7D 93.506 77 4 1 2050 2125 612444377 612444453 5.690000e-21 113.0
6 TraesCS7B01G127900 chr7A 91.219 2904 138 41 4087 6940 186640565 186637729 0.000000e+00 3842.0
7 TraesCS7B01G127900 chr7A 93.410 2094 116 18 1 2087 186644623 186642545 0.000000e+00 3083.0
8 TraesCS7B01G127900 chr7A 90.582 2028 133 21 2129 4132 186642543 186640550 0.000000e+00 2634.0
9 TraesCS7B01G127900 chr7A 95.402 87 4 0 3962 4048 574129409 574129323 9.390000e-29 139.0
10 TraesCS7B01G127900 chr7A 93.243 74 4 1 2053 2126 716394631 716394703 2.650000e-19 108.0
11 TraesCS7B01G127900 chr1B 82.791 430 57 11 6507 6931 660007278 660007695 1.100000e-97 368.0
12 TraesCS7B01G127900 chr1B 82.033 423 61 9 6511 6931 357397339 357396930 5.150000e-91 346.0
13 TraesCS7B01G127900 chr1B 81.503 346 46 12 2 336 667612274 667612612 1.150000e-67 268.0
14 TraesCS7B01G127900 chr1B 79.487 312 55 9 18 323 491223958 491223650 5.450000e-51 213.0
15 TraesCS7B01G127900 chr5D 85.882 340 43 4 6595 6931 446395855 446395518 2.380000e-94 357.0
16 TraesCS7B01G127900 chr5D 93.333 90 6 0 3962 4051 134916579 134916490 4.370000e-27 134.0
17 TraesCS7B01G127900 chr3A 83.690 374 51 10 3 370 95470825 95470456 1.850000e-90 344.0
18 TraesCS7B01G127900 chr1A 81.710 421 66 7 6511 6930 583966392 583965982 2.400000e-89 340.0
19 TraesCS7B01G127900 chr2B 82.609 391 59 6 6549 6933 43382382 43381995 3.100000e-88 337.0
20 TraesCS7B01G127900 chr2B 97.222 72 2 0 2054 2125 646215314 646215385 9.450000e-24 122.0
21 TraesCS7B01G127900 chr2D 82.507 343 55 5 3 343 591404523 591404862 5.260000e-76 296.0
22 TraesCS7B01G127900 chr2D 90.722 97 7 2 3963 4057 142662454 142662550 2.030000e-25 128.0
23 TraesCS7B01G127900 chr3D 80.779 385 53 15 5 376 90817324 90817700 1.470000e-71 281.0
24 TraesCS7B01G127900 chr3D 79.710 345 53 11 1 339 16022452 16022785 4.190000e-57 233.0
25 TraesCS7B01G127900 chr3D 94.505 91 5 0 3962 4052 326696955 326697045 2.610000e-29 141.0
26 TraesCS7B01G127900 chr6B 81.132 371 45 21 3114 3464 561151652 561151287 2.470000e-69 274.0
27 TraesCS7B01G127900 chr6B 94.444 72 4 0 2054 2125 460086801 460086872 2.050000e-20 111.0
28 TraesCS7B01G127900 chr5A 81.737 334 49 7 1 323 436907701 436908033 1.150000e-67 268.0
29 TraesCS7B01G127900 chr6D 80.749 374 44 22 3114 3464 373424015 373423647 4.130000e-67 267.0
30 TraesCS7B01G127900 chr6D 95.402 87 4 0 3962 4048 122992106 122992192 9.390000e-29 139.0
31 TraesCS7B01G127900 chr6D 85.246 61 7 2 6610 6668 416444339 416444279 2.090000e-05 62.1
32 TraesCS7B01G127900 chr6A 80.663 362 43 22 3126 3464 515672947 515672590 8.930000e-64 255.0
33 TraesCS7B01G127900 chr6A 93.814 97 5 1 3955 4050 548408152 548408056 2.020000e-30 145.0
34 TraesCS7B01G127900 chr6A 90.123 81 6 2 2047 2125 146551632 146551712 3.420000e-18 104.0
35 TraesCS7B01G127900 chr3B 80.597 335 51 10 1 323 750860442 750860774 5.380000e-61 246.0
36 TraesCS7B01G127900 chr3B 84.274 248 34 5 5 250 802311054 802310810 3.240000e-58 237.0
37 TraesCS7B01G127900 chr3B 92.308 91 7 0 3962 4052 423807013 423807103 5.650000e-26 130.0
38 TraesCS7B01G127900 chr4A 93.333 90 4 2 3962 4051 625404861 625404774 1.570000e-26 132.0
39 TraesCS7B01G127900 chr1D 93.151 73 5 0 2054 2126 370323728 370323656 2.650000e-19 108.0
40 TraesCS7B01G127900 chr1D 97.222 36 1 0 6506 6541 12144612 12144647 2.090000e-05 62.1
41 TraesCS7B01G127900 chr2A 90.123 81 8 0 2045 2125 179296725 179296645 9.520000e-19 106.0
42 TraesCS7B01G127900 chr5B 90.123 81 7 1 2047 2126 587068636 587068716 3.420000e-18 104.0
43 TraesCS7B01G127900 chr5B 81.690 71 7 5 6583 6648 669892601 669892670 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G127900 chr7B 153322882 153329822 6940 False 12818.000000 12818 100.0000 1 6941 1 chr7B.!!$F1 6940
1 TraesCS7B01G127900 chr7D 184095978 184102807 6829 False 4782.000000 5674 92.1205 1 6941 2 chr7D.!!$F2 6940
2 TraesCS7B01G127900 chr7A 186637729 186644623 6894 True 3186.333333 3842 91.7370 1 6940 3 chr7A.!!$R2 6939

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
166 167 0.032217 AGAGAAGGAGGAGGCTGGAG 60.032 60.000 0.00 0.0 0.00 3.86 F
167 168 0.325203 GAGAAGGAGGAGGCTGGAGT 60.325 60.000 0.00 0.0 0.00 3.85 F
172 173 1.000993 GAGGAGGCTGGAGTGGAGA 59.999 63.158 0.00 0.0 0.00 3.71 F
1239 1247 1.064758 AGGTTGTTGACTTGTGAGGCA 60.065 47.619 0.00 0.0 39.83 4.75 F
2360 2370 1.267806 CACAACAAGTGCCCAGTGATC 59.732 52.381 0.00 0.0 42.15 2.92 F
3045 3062 0.111061 ATGTGGAGGCTGCTTGTTGA 59.889 50.000 7.74 0.0 0.00 3.18 F
3640 3668 0.398318 GGTGTTTCTCCTGCCTCACT 59.602 55.000 0.00 0.0 0.00 3.41 F
3666 3694 0.631212 CCCTACAATTTCCCTGCCCT 59.369 55.000 0.00 0.0 0.00 5.19 F
3771 3800 0.668706 CTTCACGTCCTCTGCACTGG 60.669 60.000 0.00 0.0 0.00 4.00 F
5143 5324 0.184451 CATGCCATAGCCTTGACCCT 59.816 55.000 0.00 0.0 38.69 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1219 1227 1.064758 TGCCTCACAAGTCAACAACCT 60.065 47.619 0.00 0.0 0.00 3.50 R
1565 1574 3.009473 TCTTAGCTCTGGTGGCTCAAAAT 59.991 43.478 0.00 0.0 40.74 1.82 R
1630 1639 5.304101 ACAAGCAATGGGAATAGTCAAACAA 59.696 36.000 0.00 0.0 0.00 2.83 R
2633 2643 0.031010 CCCCCTTCCCTAGTACTGCT 60.031 60.000 5.39 0.0 0.00 4.24 R
3759 3788 0.250901 GGAAAAGCCAGTGCAGAGGA 60.251 55.000 8.50 0.0 41.13 3.71 R
4155 4294 0.516877 GCTAACAGCACATTCGCACA 59.483 50.000 0.00 0.0 41.89 4.57 R
4487 4636 0.764271 TTGTCCTGCACCACTGATGA 59.236 50.000 0.00 0.0 0.00 2.92 R
4942 5096 1.066071 GGCAGACTCTAGGTTTGACCC 60.066 57.143 6.20 0.0 39.75 4.46 R
5153 5334 1.177401 GAATTCCAGGGTCAAGCACC 58.823 55.000 0.00 0.0 45.97 5.01 R
6459 6656 0.543749 GGGAGAAGATCACCCACCTG 59.456 60.000 7.85 0.0 45.31 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 3.992406 TCCATCCAGGATGAGGCC 58.008 61.111 28.79 0.00 43.07 5.19
83 84 3.733709 CCTATGTGGAGGCCAATCC 57.266 57.895 5.01 4.42 40.03 3.01
84 85 0.250467 CCTATGTGGAGGCCAATCCG 60.250 60.000 5.01 0.00 42.77 4.18
93 94 2.115291 GGCCAATCCGCAGTTCCTC 61.115 63.158 0.00 0.00 0.00 3.71
94 95 2.115291 GCCAATCCGCAGTTCCTCC 61.115 63.158 0.00 0.00 0.00 4.30
130 131 3.257561 CCGATGTGCTCTTCGCCG 61.258 66.667 16.06 3.11 39.05 6.46
148 149 1.467875 CGAACTTGACGCGGAGATAG 58.532 55.000 12.47 2.61 0.00 2.08
151 152 2.039818 ACTTGACGCGGAGATAGAGA 57.960 50.000 12.47 0.00 0.00 3.10
162 163 2.110011 GGAGATAGAGAAGGAGGAGGCT 59.890 54.545 0.00 0.00 0.00 4.58
164 165 2.158325 AGATAGAGAAGGAGGAGGCTGG 60.158 54.545 0.00 0.00 0.00 4.85
165 166 1.309876 TAGAGAAGGAGGAGGCTGGA 58.690 55.000 0.00 0.00 0.00 3.86
166 167 0.032217 AGAGAAGGAGGAGGCTGGAG 60.032 60.000 0.00 0.00 0.00 3.86
167 168 0.325203 GAGAAGGAGGAGGCTGGAGT 60.325 60.000 0.00 0.00 0.00 3.85
169 170 1.614824 AAGGAGGAGGCTGGAGTGG 60.615 63.158 0.00 0.00 0.00 4.00
170 171 2.039624 GGAGGAGGCTGGAGTGGA 59.960 66.667 0.00 0.00 0.00 4.02
171 172 2.063378 GGAGGAGGCTGGAGTGGAG 61.063 68.421 0.00 0.00 0.00 3.86
172 173 1.000993 GAGGAGGCTGGAGTGGAGA 59.999 63.158 0.00 0.00 0.00 3.71
174 175 2.730524 GGAGGCTGGAGTGGAGAGC 61.731 68.421 0.00 0.00 0.00 4.09
176 177 4.154347 GGCTGGAGTGGAGAGCCG 62.154 72.222 0.00 0.00 42.84 5.52
177 178 4.154347 GCTGGAGTGGAGAGCCGG 62.154 72.222 0.00 0.00 36.79 6.13
178 179 2.363018 CTGGAGTGGAGAGCCGGA 60.363 66.667 5.05 0.00 36.79 5.14
180 181 3.844090 GGAGTGGAGAGCCGGAGC 61.844 72.222 5.05 0.00 36.79 4.70
203 204 3.086143 CTGCCACCCATGTACCCA 58.914 61.111 0.00 0.00 0.00 4.51
204 205 1.378514 CTGCCACCCATGTACCCAC 60.379 63.158 0.00 0.00 0.00 4.61
209 210 2.124736 CCCATGTACCCACAGCCG 60.125 66.667 0.00 0.00 38.30 5.52
233 234 2.625737 CACAGAGATTGCCGACATCTT 58.374 47.619 0.00 0.00 0.00 2.40
258 259 3.383185 ACGAGGAGTAGCTACGTAGTACT 59.617 47.826 24.97 24.97 45.11 2.73
314 315 9.046296 GGATTTGAGTATTTAGTATGAGGTGTG 57.954 37.037 0.00 0.00 0.00 3.82
339 340 5.534278 TGGATGCAGTTGTGTTAATTTGAGA 59.466 36.000 0.00 0.00 0.00 3.27
344 345 6.127758 TGCAGTTGTGTTAATTTGAGAAGTGT 60.128 34.615 0.00 0.00 0.00 3.55
393 394 4.933330 AGCGTGTCGATTTGTCATATACT 58.067 39.130 0.00 0.00 0.00 2.12
443 448 2.380084 ATACGGTGCAAAGACACGAT 57.620 45.000 0.00 0.00 41.65 3.73
464 469 8.461222 CACGATCAAATACAAATATGGGCATAT 58.539 33.333 0.00 0.00 35.63 1.78
535 541 8.019094 AGAAATATAAAACAAAAACGTCCCTCG 58.981 33.333 0.00 0.00 46.00 4.63
536 542 2.855660 AAAACAAAAACGTCCCTCGG 57.144 45.000 0.00 0.00 44.69 4.63
805 811 5.415077 TCTCTTCTTGGTAACGAAGACCTAG 59.585 44.000 9.13 9.13 40.33 3.02
868 875 2.627945 TGCGAGCAACCGAATCTTAAT 58.372 42.857 0.00 0.00 0.00 1.40
935 942 3.669536 ACTGCTCTAGAAAGTTTCTGGC 58.330 45.455 25.27 23.31 40.94 4.85
938 945 2.926838 GCTCTAGAAAGTTTCTGGCGAG 59.073 50.000 25.27 24.08 40.94 5.03
942 949 1.143073 AGAAAGTTTCTGGCGAGGGTT 59.857 47.619 17.35 0.00 38.91 4.11
962 969 5.151389 GGTTGTCCGTTTATGTTTCATGTC 58.849 41.667 0.00 0.00 0.00 3.06
981 988 3.064207 GTCTTGTTGATTACCGCTGTCA 58.936 45.455 0.00 0.00 0.00 3.58
1131 1139 3.156293 CGACTCTGATGAGGAGGATGAT 58.844 50.000 0.00 0.00 44.29 2.45
1235 1243 3.627395 ACTCAGGTTGTTGACTTGTGA 57.373 42.857 0.00 0.00 36.75 3.58
1236 1244 3.535561 ACTCAGGTTGTTGACTTGTGAG 58.464 45.455 0.00 0.00 36.75 3.51
1238 1246 1.334869 CAGGTTGTTGACTTGTGAGGC 59.665 52.381 0.00 0.00 31.17 4.70
1239 1247 1.064758 AGGTTGTTGACTTGTGAGGCA 60.065 47.619 0.00 0.00 39.83 4.75
1240 1248 1.956477 GGTTGTTGACTTGTGAGGCAT 59.044 47.619 0.00 0.00 41.60 4.40
1241 1249 3.146066 GGTTGTTGACTTGTGAGGCATA 58.854 45.455 0.00 0.00 41.60 3.14
1242 1250 3.758554 GGTTGTTGACTTGTGAGGCATAT 59.241 43.478 0.00 0.00 41.60 1.78
1243 1251 4.218417 GGTTGTTGACTTGTGAGGCATATT 59.782 41.667 0.00 0.00 41.60 1.28
1244 1252 5.414454 GGTTGTTGACTTGTGAGGCATATTA 59.586 40.000 0.00 0.00 41.60 0.98
1310 1318 8.685838 ACTTACTGCTATGTTAAGTTTGGAAA 57.314 30.769 0.00 0.00 0.00 3.13
1324 1332 4.821805 AGTTTGGAAATAGTGTGACACCAG 59.178 41.667 12.81 0.00 34.49 4.00
1411 1419 2.383338 ACATTTTCCATGGTCCCCTTCT 59.617 45.455 12.58 0.00 0.00 2.85
1428 1436 5.045432 CCCCTTCTTGTATAACTTGGGTGTA 60.045 44.000 0.00 0.00 0.00 2.90
1429 1437 6.113411 CCCTTCTTGTATAACTTGGGTGTAG 58.887 44.000 0.00 0.00 0.00 2.74
1430 1438 6.296259 CCCTTCTTGTATAACTTGGGTGTAGT 60.296 42.308 0.00 0.00 0.00 2.73
1432 1440 7.333672 CCTTCTTGTATAACTTGGGTGTAGTTC 59.666 40.741 0.00 0.00 37.12 3.01
1433 1441 7.549147 TCTTGTATAACTTGGGTGTAGTTCT 57.451 36.000 0.00 0.00 37.12 3.01
1434 1442 7.970102 TCTTGTATAACTTGGGTGTAGTTCTT 58.030 34.615 0.00 0.00 37.12 2.52
1438 1446 7.814107 TGTATAACTTGGGTGTAGTTCTTAACG 59.186 37.037 0.00 0.00 37.12 3.18
1463 1471 6.317642 GGCCTTTTCCTATCTTTTCTCTCTTC 59.682 42.308 0.00 0.00 0.00 2.87
1630 1639 9.905713 TGTATCTGGATGACTAAATAAAGCTTT 57.094 29.630 17.30 17.30 0.00 3.51
1832 1841 8.876275 ATTACAGTACAAAAACTACGAGAACA 57.124 30.769 0.00 0.00 0.00 3.18
1866 1875 5.252547 TGCAGAAACAGCAATGAAGGTATA 58.747 37.500 0.00 0.00 39.39 1.47
1916 1925 7.337689 TGGGAGAAAATATTCTGACATTGTGAG 59.662 37.037 0.00 0.00 45.91 3.51
2064 2073 3.445096 TGTTTAGTAAGTACTCCCTCCGC 59.555 47.826 0.00 0.00 37.73 5.54
2080 2089 3.432326 CCTCCGCCCCATAATATAAGAGC 60.432 52.174 0.00 0.00 0.00 4.09
2121 2130 5.222484 ACTCTTATATTATGGGACGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
2159 2168 7.098477 TCCTGCATTTCAATAAAGATGGTTTG 58.902 34.615 0.00 0.00 0.00 2.93
2266 2275 2.483583 TGTTCAATTGCAACGTGTCC 57.516 45.000 0.00 0.00 0.00 4.02
2302 2311 9.929722 TCTAAATGTTCATACACGAAATTATGC 57.070 29.630 0.00 0.00 37.03 3.14
2360 2370 1.267806 CACAACAAGTGCCCAGTGATC 59.732 52.381 0.00 0.00 42.15 2.92
2362 2372 1.538512 CAACAAGTGCCCAGTGATCAG 59.461 52.381 0.00 0.00 0.00 2.90
2383 2393 9.160496 GATCAGAAATTCGATCTATATTTGCCT 57.840 33.333 15.38 0.00 36.04 4.75
2438 2448 3.381908 TGGAGAGGCTATCGAGAAACTTC 59.618 47.826 2.62 0.00 0.00 3.01
2463 2473 1.571955 TCATAGCCAACCTGCTCTCA 58.428 50.000 0.00 0.00 41.68 3.27
2524 2534 5.532779 TGTGCAATGTTTGTGTCTACCAATA 59.467 36.000 0.00 0.00 0.00 1.90
2526 2536 7.090173 GTGCAATGTTTGTGTCTACCAATATT 58.910 34.615 0.00 0.00 0.00 1.28
2536 2546 7.564793 TGTGTCTACCAATATTGCTCATAACT 58.435 34.615 10.11 0.00 0.00 2.24
2548 2558 5.801350 TGCTCATAACTCTACATTTGTGC 57.199 39.130 0.00 0.00 0.00 4.57
2619 2629 2.046280 AGTTCTTCAGGGGCTTACCT 57.954 50.000 0.00 0.00 43.08 3.08
2623 2633 2.632537 TCTTCAGGGGCTTACCTTCTT 58.367 47.619 0.00 0.00 39.34 2.52
2624 2634 2.572104 TCTTCAGGGGCTTACCTTCTTC 59.428 50.000 0.00 0.00 39.34 2.87
2626 2636 3.484953 TCAGGGGCTTACCTTCTTCTA 57.515 47.619 0.00 0.00 39.34 2.10
2627 2637 3.798515 TCAGGGGCTTACCTTCTTCTAA 58.201 45.455 0.00 0.00 39.34 2.10
2628 2638 3.518303 TCAGGGGCTTACCTTCTTCTAAC 59.482 47.826 0.00 0.00 39.34 2.34
2629 2639 3.263425 CAGGGGCTTACCTTCTTCTAACA 59.737 47.826 0.00 0.00 39.34 2.41
2630 2640 3.519913 AGGGGCTTACCTTCTTCTAACAG 59.480 47.826 0.00 0.00 37.69 3.16
2631 2641 3.518303 GGGGCTTACCTTCTTCTAACAGA 59.482 47.826 0.00 0.00 40.03 3.41
2632 2642 4.164413 GGGGCTTACCTTCTTCTAACAGAT 59.836 45.833 0.00 0.00 40.03 2.90
2633 2643 5.365895 GGGGCTTACCTTCTTCTAACAGATA 59.634 44.000 0.00 0.00 40.03 1.98
2634 2644 6.463190 GGGGCTTACCTTCTTCTAACAGATAG 60.463 46.154 0.00 0.00 40.03 2.08
2635 2645 5.986741 GGCTTACCTTCTTCTAACAGATAGC 59.013 44.000 0.00 0.00 0.00 2.97
2636 2646 6.407074 GGCTTACCTTCTTCTAACAGATAGCA 60.407 42.308 0.00 0.00 0.00 3.49
2637 2647 6.699642 GCTTACCTTCTTCTAACAGATAGCAG 59.300 42.308 0.00 0.00 0.00 4.24
2638 2648 7.631811 GCTTACCTTCTTCTAACAGATAGCAGT 60.632 40.741 0.00 0.00 0.00 4.40
2639 2649 8.818622 TTACCTTCTTCTAACAGATAGCAGTA 57.181 34.615 0.00 0.00 0.00 2.74
2640 2650 7.102847 ACCTTCTTCTAACAGATAGCAGTAC 57.897 40.000 0.00 0.00 0.00 2.73
2641 2651 6.893005 ACCTTCTTCTAACAGATAGCAGTACT 59.107 38.462 0.00 0.00 0.00 2.73
2642 2652 8.053963 ACCTTCTTCTAACAGATAGCAGTACTA 58.946 37.037 0.00 0.00 34.64 1.82
2677 2687 1.751924 GTCCTACCTGCTACCTGTCAG 59.248 57.143 0.00 0.00 0.00 3.51
2828 2838 7.175641 GTGCCTATGATTGTATTTTCTATGCCT 59.824 37.037 0.00 0.00 0.00 4.75
2902 2916 2.158385 TGGGTTCTGGCTTGGTTACATT 60.158 45.455 0.00 0.00 0.00 2.71
2939 2956 7.505585 CCACCCTGCTTATTATTATTTGAGGAA 59.494 37.037 0.00 0.00 0.00 3.36
2941 2958 9.136323 ACCCTGCTTATTATTATTTGAGGAAAG 57.864 33.333 0.00 0.00 0.00 2.62
2977 2994 6.445357 TGGTTTAACCTGTTCAAAGACTTC 57.555 37.500 15.68 0.00 39.58 3.01
3012 3029 8.523523 TGATTCTGCATGTAATTTTGTTTCAG 57.476 30.769 0.00 0.00 0.00 3.02
3045 3062 0.111061 ATGTGGAGGCTGCTTGTTGA 59.889 50.000 7.74 0.00 0.00 3.18
3050 3067 1.312815 GAGGCTGCTTGTTGACAGTT 58.687 50.000 0.00 0.00 36.26 3.16
3122 3139 8.545229 AAGAAATTAATCGAGCTGATCTATGG 57.455 34.615 0.00 0.00 35.84 2.74
3179 3196 6.378661 AAGCATGATGCCTACCTAATATCA 57.621 37.500 14.72 0.00 46.52 2.15
3206 3223 1.371183 GGTGCTACACTGGTCAGCA 59.629 57.895 0.00 0.00 42.77 4.41
3458 3482 3.326006 TCCAGGGAGAGCTAATATGCAAG 59.674 47.826 0.00 0.00 34.99 4.01
3495 3519 2.598192 CACTTTGTTTTTGCACTGACCG 59.402 45.455 0.00 0.00 0.00 4.79
3567 3591 2.182842 GGGTAGCTGCATCTTGCCG 61.183 63.158 3.61 0.00 44.23 5.69
3596 3620 1.607225 TCTTACCCTGCCCATTCCAT 58.393 50.000 0.00 0.00 0.00 3.41
3603 3627 1.073923 CCTGCCCATTCCATAGTACCC 59.926 57.143 0.00 0.00 0.00 3.69
3640 3668 0.398318 GGTGTTTCTCCTGCCTCACT 59.602 55.000 0.00 0.00 0.00 3.41
3662 3690 1.357761 ACCCACCCTACAATTTCCCTG 59.642 52.381 0.00 0.00 0.00 4.45
3666 3694 0.631212 CCCTACAATTTCCCTGCCCT 59.369 55.000 0.00 0.00 0.00 5.19
3668 3696 2.447047 CCCTACAATTTCCCTGCCCTAT 59.553 50.000 0.00 0.00 0.00 2.57
3670 3698 3.138283 CCTACAATTTCCCTGCCCTATCA 59.862 47.826 0.00 0.00 0.00 2.15
3687 3715 2.885135 TCAGCCCATCTTTCATGTGT 57.115 45.000 0.00 0.00 0.00 3.72
3728 3757 3.139077 CCTTTGTCACCTTAGTGTGTCC 58.861 50.000 0.00 0.00 44.83 4.02
3731 3760 1.007336 GTCACCTTAGTGTGTCCGCG 61.007 60.000 0.00 0.00 44.83 6.46
3759 3788 1.299541 CCTGTTCACTTGCTTCACGT 58.700 50.000 0.00 0.00 0.00 4.49
3764 3793 1.040646 TCACTTGCTTCACGTCCTCT 58.959 50.000 0.00 0.00 0.00 3.69
3771 3800 0.668706 CTTCACGTCCTCTGCACTGG 60.669 60.000 0.00 0.00 0.00 4.00
3775 3804 1.302033 CGTCCTCTGCACTGGCTTT 60.302 57.895 0.00 0.00 41.91 3.51
3780 3809 1.228552 TCTGCACTGGCTTTTCCCC 60.229 57.895 0.00 0.00 41.91 4.81
3809 3838 0.676184 AGTTCTCGTGAAGCTGCAGA 59.324 50.000 20.43 0.00 32.15 4.26
3829 3858 1.342074 CACCTGACAGAACCTCCTCA 58.658 55.000 3.32 0.00 0.00 3.86
3845 3874 2.092753 TCCTCATGCAATCTGAAGGTCC 60.093 50.000 0.00 0.00 0.00 4.46
3847 3876 2.943690 CTCATGCAATCTGAAGGTCCTG 59.056 50.000 0.00 0.00 0.00 3.86
3877 3906 2.825836 GCCCCTGTTGCTGATCCG 60.826 66.667 0.00 0.00 0.00 4.18
3887 3916 2.890109 GCTGATCCGATGGCTTGCG 61.890 63.158 0.00 0.00 0.00 4.85
3908 3937 4.174009 CGTTCTGTGGATACGAATTGTCT 58.826 43.478 0.00 0.00 37.47 3.41
3952 3981 6.486993 AGTTCCCTTAAATTTGTCACTGTCTC 59.513 38.462 0.00 0.00 0.00 3.36
3957 4061 7.611855 CCCTTAAATTTGTCACTGTCTCCTATT 59.388 37.037 0.00 0.00 0.00 1.73
3959 4063 9.831737 CTTAAATTTGTCACTGTCTCCTATTTG 57.168 33.333 0.00 0.00 0.00 2.32
3961 4065 7.823745 AATTTGTCACTGTCTCCTATTTGTT 57.176 32.000 0.00 0.00 0.00 2.83
3962 4066 8.918202 AATTTGTCACTGTCTCCTATTTGTTA 57.082 30.769 0.00 0.00 0.00 2.41
3963 4067 7.724305 TTTGTCACTGTCTCCTATTTGTTAC 57.276 36.000 0.00 0.00 0.00 2.50
3964 4068 6.665992 TGTCACTGTCTCCTATTTGTTACT 57.334 37.500 0.00 0.00 0.00 2.24
3965 4069 7.770366 TGTCACTGTCTCCTATTTGTTACTA 57.230 36.000 0.00 0.00 0.00 1.82
3966 4070 7.600065 TGTCACTGTCTCCTATTTGTTACTAC 58.400 38.462 0.00 0.00 0.00 2.73
3967 4071 7.034397 GTCACTGTCTCCTATTTGTTACTACC 58.966 42.308 0.00 0.00 0.00 3.18
3968 4072 6.952358 TCACTGTCTCCTATTTGTTACTACCT 59.048 38.462 0.00 0.00 0.00 3.08
3969 4073 7.122353 TCACTGTCTCCTATTTGTTACTACCTC 59.878 40.741 0.00 0.00 0.00 3.85
3970 4074 6.380560 ACTGTCTCCTATTTGTTACTACCTCC 59.619 42.308 0.00 0.00 0.00 4.30
3971 4075 5.359009 TGTCTCCTATTTGTTACTACCTCCG 59.641 44.000 0.00 0.00 0.00 4.63
3972 4076 5.591877 GTCTCCTATTTGTTACTACCTCCGA 59.408 44.000 0.00 0.00 0.00 4.55
3973 4077 6.264970 GTCTCCTATTTGTTACTACCTCCGAT 59.735 42.308 0.00 0.00 0.00 4.18
3974 4078 6.489361 TCTCCTATTTGTTACTACCTCCGATC 59.511 42.308 0.00 0.00 0.00 3.69
3975 4079 5.537674 TCCTATTTGTTACTACCTCCGATCC 59.462 44.000 0.00 0.00 0.00 3.36
3976 4080 5.303589 CCTATTTGTTACTACCTCCGATCCA 59.696 44.000 0.00 0.00 0.00 3.41
3977 4081 5.888982 ATTTGTTACTACCTCCGATCCAT 57.111 39.130 0.00 0.00 0.00 3.41
3978 4082 6.989155 ATTTGTTACTACCTCCGATCCATA 57.011 37.500 0.00 0.00 0.00 2.74
3979 4083 6.795144 TTTGTTACTACCTCCGATCCATAA 57.205 37.500 0.00 0.00 0.00 1.90
3980 4084 5.779529 TGTTACTACCTCCGATCCATAAC 57.220 43.478 0.00 0.00 0.00 1.89
3981 4085 5.202765 TGTTACTACCTCCGATCCATAACA 58.797 41.667 0.00 0.00 0.00 2.41
3982 4086 5.657745 TGTTACTACCTCCGATCCATAACAA 59.342 40.000 0.00 0.00 30.53 2.83
3983 4087 4.939052 ACTACCTCCGATCCATAACAAG 57.061 45.455 0.00 0.00 0.00 3.16
3984 4088 4.287552 ACTACCTCCGATCCATAACAAGT 58.712 43.478 0.00 0.00 0.00 3.16
3985 4089 3.543680 ACCTCCGATCCATAACAAGTG 57.456 47.619 0.00 0.00 0.00 3.16
3986 4090 2.838202 ACCTCCGATCCATAACAAGTGT 59.162 45.455 0.00 0.00 0.00 3.55
3987 4091 3.118738 ACCTCCGATCCATAACAAGTGTC 60.119 47.826 0.00 0.00 0.00 3.67
3988 4092 3.116300 CTCCGATCCATAACAAGTGTCG 58.884 50.000 0.00 0.00 0.00 4.35
3989 4093 1.593006 CCGATCCATAACAAGTGTCGC 59.407 52.381 0.00 0.00 0.00 5.19
3990 4094 2.267426 CGATCCATAACAAGTGTCGCA 58.733 47.619 0.00 0.00 0.00 5.10
3991 4095 2.282555 CGATCCATAACAAGTGTCGCAG 59.717 50.000 0.00 0.00 0.00 5.18
3992 4096 2.831685 TCCATAACAAGTGTCGCAGT 57.168 45.000 0.00 0.00 0.00 4.40
3993 4097 3.120321 TCCATAACAAGTGTCGCAGTT 57.880 42.857 0.00 0.00 0.00 3.16
3994 4098 3.472652 TCCATAACAAGTGTCGCAGTTT 58.527 40.909 0.50 0.00 0.00 2.66
3995 4099 3.880490 TCCATAACAAGTGTCGCAGTTTT 59.120 39.130 0.50 1.12 0.00 2.43
3996 4100 3.974401 CCATAACAAGTGTCGCAGTTTTG 59.026 43.478 0.50 3.48 0.00 2.44
3997 4101 4.260990 CCATAACAAGTGTCGCAGTTTTGA 60.261 41.667 11.13 0.00 0.00 2.69
3998 4102 3.840890 AACAAGTGTCGCAGTTTTGAA 57.159 38.095 0.00 0.00 0.00 2.69
3999 4103 3.131240 ACAAGTGTCGCAGTTTTGAAC 57.869 42.857 0.00 0.00 0.00 3.18
4000 4104 2.747446 ACAAGTGTCGCAGTTTTGAACT 59.253 40.909 0.00 0.00 44.06 3.01
4001 4105 3.936453 ACAAGTGTCGCAGTTTTGAACTA 59.064 39.130 0.00 0.00 40.46 2.24
4002 4106 4.393680 ACAAGTGTCGCAGTTTTGAACTAA 59.606 37.500 0.00 0.00 40.46 2.24
4003 4107 4.531659 AGTGTCGCAGTTTTGAACTAAC 57.468 40.909 0.00 0.00 40.46 2.34
4004 4108 3.311596 AGTGTCGCAGTTTTGAACTAACC 59.688 43.478 0.00 0.00 40.46 2.85
4005 4109 3.311596 GTGTCGCAGTTTTGAACTAACCT 59.688 43.478 0.00 0.00 40.46 3.50
4006 4110 3.311322 TGTCGCAGTTTTGAACTAACCTG 59.689 43.478 0.00 0.00 40.46 4.00
4007 4111 3.558418 GTCGCAGTTTTGAACTAACCTGA 59.442 43.478 0.00 0.00 40.46 3.86
4008 4112 3.807622 TCGCAGTTTTGAACTAACCTGAG 59.192 43.478 0.00 0.00 40.46 3.35
4009 4113 3.560068 CGCAGTTTTGAACTAACCTGAGT 59.440 43.478 0.00 0.00 40.46 3.41
4010 4114 4.035208 CGCAGTTTTGAACTAACCTGAGTT 59.965 41.667 0.00 0.00 42.42 3.01
4019 4123 5.500645 AACTAACCTGAGTTCAAAACTGC 57.499 39.130 0.00 0.00 43.03 4.40
4020 4124 3.560068 ACTAACCTGAGTTCAAAACTGCG 59.440 43.478 0.00 0.00 43.03 5.18
4021 4125 2.325583 ACCTGAGTTCAAAACTGCGA 57.674 45.000 0.00 0.00 43.03 5.10
4022 4126 1.940613 ACCTGAGTTCAAAACTGCGAC 59.059 47.619 0.00 0.00 43.03 5.19
4023 4127 1.939934 CCTGAGTTCAAAACTGCGACA 59.060 47.619 0.00 0.00 43.03 4.35
4024 4128 2.286418 CCTGAGTTCAAAACTGCGACAC 60.286 50.000 0.00 0.00 43.03 3.67
4025 4129 2.609459 CTGAGTTCAAAACTGCGACACT 59.391 45.455 0.00 0.00 43.03 3.55
4026 4130 3.006940 TGAGTTCAAAACTGCGACACTT 58.993 40.909 0.00 0.00 43.03 3.16
4027 4131 4.185394 TGAGTTCAAAACTGCGACACTTA 58.815 39.130 0.00 0.00 43.03 2.24
4028 4132 4.814234 TGAGTTCAAAACTGCGACACTTAT 59.186 37.500 0.00 0.00 43.03 1.73
4029 4133 5.295787 TGAGTTCAAAACTGCGACACTTATT 59.704 36.000 0.00 0.00 43.03 1.40
4030 4134 6.131544 AGTTCAAAACTGCGACACTTATTT 57.868 33.333 0.00 0.00 41.01 1.40
4031 4135 6.560711 AGTTCAAAACTGCGACACTTATTTT 58.439 32.000 0.00 0.00 41.01 1.82
4032 4136 6.472163 AGTTCAAAACTGCGACACTTATTTTG 59.528 34.615 0.00 0.00 41.01 2.44
4033 4137 5.277825 TCAAAACTGCGACACTTATTTTGG 58.722 37.500 7.24 0.00 37.53 3.28
4034 4138 5.066634 TCAAAACTGCGACACTTATTTTGGA 59.933 36.000 7.24 0.00 37.53 3.53
4035 4139 5.705609 AAACTGCGACACTTATTTTGGAT 57.294 34.783 0.00 0.00 0.00 3.41
4036 4140 4.946784 ACTGCGACACTTATTTTGGATC 57.053 40.909 0.00 0.00 0.00 3.36
4037 4141 3.370978 ACTGCGACACTTATTTTGGATCG 59.629 43.478 0.00 0.00 0.00 3.69
4038 4142 2.675844 TGCGACACTTATTTTGGATCGG 59.324 45.455 0.00 0.00 0.00 4.18
4039 4143 2.933906 GCGACACTTATTTTGGATCGGA 59.066 45.455 0.00 0.00 0.00 4.55
4040 4144 3.001330 GCGACACTTATTTTGGATCGGAG 59.999 47.826 0.00 0.00 0.00 4.63
4041 4145 3.555956 CGACACTTATTTTGGATCGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
4042 4146 3.877508 GACACTTATTTTGGATCGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4043 4147 3.521937 ACACTTATTTTGGATCGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
4044 4148 4.130118 CACTTATTTTGGATCGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
4082 4186 9.710818 ACCCACTCTCTTAGTATTAGATTGTAA 57.289 33.333 0.00 0.00 35.76 2.41
4150 4289 1.376466 GCCTCTCTTTGCTGGTGGA 59.624 57.895 0.00 0.00 0.00 4.02
4155 4294 1.980765 TCTCTTTGCTGGTGGAGATGT 59.019 47.619 0.00 0.00 31.02 3.06
4159 4298 0.890542 TTGCTGGTGGAGATGTGTGC 60.891 55.000 0.00 0.00 0.00 4.57
4222 4361 6.374333 TGCACCTCCTATTCAGTTAAATTGAC 59.626 38.462 0.00 0.00 0.00 3.18
4231 4370 5.342806 TCAGTTAAATTGACGCTGTTCAG 57.657 39.130 0.00 0.00 0.00 3.02
4242 4381 4.814234 TGACGCTGTTCAGTTACAAATTCT 59.186 37.500 1.78 0.00 0.00 2.40
4247 4386 5.008613 GCTGTTCAGTTACAAATTCTGTGGA 59.991 40.000 1.78 0.00 39.20 4.02
4459 4608 3.002348 GGTAAATGTTATGCTCGGCTGTC 59.998 47.826 0.00 0.00 0.00 3.51
4471 4620 3.119708 GCTCGGCTGTCAAAGATTCAATT 60.120 43.478 0.00 0.00 0.00 2.32
4476 4625 4.143263 GGCTGTCAAAGATTCAATTTTGCG 60.143 41.667 0.00 0.00 34.96 4.85
4487 4636 6.930722 AGATTCAATTTTGCGGAACATTCTTT 59.069 30.769 0.00 0.00 0.00 2.52
4488 4637 6.523676 TTCAATTTTGCGGAACATTCTTTC 57.476 33.333 0.00 0.00 0.00 2.62
4489 4638 5.595885 TCAATTTTGCGGAACATTCTTTCA 58.404 33.333 0.00 0.00 0.00 2.69
4490 4639 6.222389 TCAATTTTGCGGAACATTCTTTCAT 58.778 32.000 0.00 0.00 0.00 2.57
4491 4640 6.365789 TCAATTTTGCGGAACATTCTTTCATC 59.634 34.615 0.00 0.00 0.00 2.92
4492 4641 4.844998 TTTGCGGAACATTCTTTCATCA 57.155 36.364 0.00 0.00 0.00 3.07
4493 4642 4.424061 TTGCGGAACATTCTTTCATCAG 57.576 40.909 0.00 0.00 0.00 2.90
4494 4643 3.411446 TGCGGAACATTCTTTCATCAGT 58.589 40.909 0.00 0.00 0.00 3.41
4495 4644 3.189080 TGCGGAACATTCTTTCATCAGTG 59.811 43.478 0.00 0.00 0.00 3.66
4496 4645 3.426695 GCGGAACATTCTTTCATCAGTGG 60.427 47.826 0.00 0.00 0.00 4.00
4497 4646 3.753272 CGGAACATTCTTTCATCAGTGGT 59.247 43.478 0.00 0.00 0.00 4.16
4498 4647 4.378770 CGGAACATTCTTTCATCAGTGGTG 60.379 45.833 0.00 0.00 0.00 4.17
4499 4648 4.479619 GAACATTCTTTCATCAGTGGTGC 58.520 43.478 0.00 0.00 0.00 5.01
4500 4649 3.489355 ACATTCTTTCATCAGTGGTGCA 58.511 40.909 0.00 0.00 0.00 4.57
4501 4650 3.504906 ACATTCTTTCATCAGTGGTGCAG 59.495 43.478 0.00 0.00 0.00 4.41
4502 4651 2.189594 TCTTTCATCAGTGGTGCAGG 57.810 50.000 0.00 0.00 0.00 4.85
4503 4652 1.699083 TCTTTCATCAGTGGTGCAGGA 59.301 47.619 0.00 0.00 0.00 3.86
4504 4653 1.808945 CTTTCATCAGTGGTGCAGGAC 59.191 52.381 0.00 0.00 0.00 3.85
4554 4703 3.054802 AGCCACAAGATTACTCTTCCCTG 60.055 47.826 0.00 0.00 39.78 4.45
4556 4705 3.519510 CCACAAGATTACTCTTCCCTGGA 59.480 47.826 0.00 0.00 39.78 3.86
4562 4711 6.056090 AGATTACTCTTCCCTGGAAACTTC 57.944 41.667 0.00 0.00 33.34 3.01
4569 4718 5.705400 TCTTCCCTGGAAACTTCTTTCATT 58.295 37.500 0.00 0.00 38.04 2.57
4578 4727 9.403110 CTGGAAACTTCTTTCATTAGAATGTTG 57.597 33.333 2.32 0.00 38.04 3.33
4599 4748 5.545063 TGGGAACGAGCTCATATCAATAA 57.455 39.130 15.40 0.00 0.00 1.40
4713 4862 4.882671 TCTATTAACGACTCCGGTGTAC 57.117 45.455 9.57 2.85 40.78 2.90
4798 4947 8.970691 AATGTAAGTTCTGTTATTCACATTGC 57.029 30.769 0.00 0.00 34.89 3.56
4806 4955 6.550843 TCTGTTATTCACATTGCCATTTACG 58.449 36.000 0.00 0.00 33.76 3.18
4873 5025 4.019792 TCATTTCTAACAAGCTCCAGCA 57.980 40.909 0.48 0.00 45.16 4.41
4969 5123 1.896465 ACCTAGAGTCTGCCAACAGTC 59.104 52.381 1.86 0.00 44.77 3.51
4984 5138 1.414919 ACAGTCGAGGCAACCAAAGTA 59.585 47.619 0.00 0.00 37.17 2.24
4987 5141 3.865745 CAGTCGAGGCAACCAAAGTATAG 59.134 47.826 0.00 0.00 37.17 1.31
4992 5146 3.858247 AGGCAACCAAAGTATAGTCGAC 58.142 45.455 7.70 7.70 37.17 4.20
5017 5171 8.258007 ACGAAATCTAATCCAATCAGAACACTA 58.742 33.333 0.00 0.00 0.00 2.74
5087 5242 2.115291 GCCGAATGTGCTCCTTCCC 61.115 63.158 0.00 0.00 0.00 3.97
5138 5319 3.451665 GCCCATGCCATAGCCTTG 58.548 61.111 0.00 0.00 38.69 3.61
5139 5320 1.152694 GCCCATGCCATAGCCTTGA 60.153 57.895 0.00 0.00 38.69 3.02
5140 5321 1.458639 GCCCATGCCATAGCCTTGAC 61.459 60.000 0.00 0.00 38.69 3.18
5141 5322 0.825010 CCCATGCCATAGCCTTGACC 60.825 60.000 0.00 0.00 38.69 4.02
5142 5323 0.825010 CCATGCCATAGCCTTGACCC 60.825 60.000 0.00 0.00 38.69 4.46
5143 5324 0.184451 CATGCCATAGCCTTGACCCT 59.816 55.000 0.00 0.00 38.69 4.34
5144 5325 1.421268 CATGCCATAGCCTTGACCCTA 59.579 52.381 0.00 0.00 38.69 3.53
5145 5326 1.819753 TGCCATAGCCTTGACCCTAT 58.180 50.000 0.00 0.00 38.69 2.57
5146 5327 2.984672 TGCCATAGCCTTGACCCTATA 58.015 47.619 0.00 0.00 38.69 1.31
5147 5328 2.906389 TGCCATAGCCTTGACCCTATAG 59.094 50.000 0.00 0.00 38.69 1.31
5148 5329 3.173965 GCCATAGCCTTGACCCTATAGA 58.826 50.000 0.00 0.00 0.00 1.98
5149 5330 3.583086 GCCATAGCCTTGACCCTATAGAA 59.417 47.826 0.00 0.00 0.00 2.10
5150 5331 4.323104 GCCATAGCCTTGACCCTATAGAAG 60.323 50.000 0.00 0.00 0.00 2.85
5151 5332 5.087323 CCATAGCCTTGACCCTATAGAAGA 58.913 45.833 0.00 0.00 0.00 2.87
5152 5333 5.723887 CCATAGCCTTGACCCTATAGAAGAT 59.276 44.000 0.00 0.00 0.00 2.40
5153 5334 6.351711 CCATAGCCTTGACCCTATAGAAGATG 60.352 46.154 0.00 0.00 0.00 2.90
5171 5352 0.482446 TGGTGCTTGACCCTGGAATT 59.518 50.000 0.00 0.00 45.45 2.17
5181 5362 6.381498 TTGACCCTGGAATTCAACTATACA 57.619 37.500 7.93 0.00 0.00 2.29
5183 5364 6.591935 TGACCCTGGAATTCAACTATACATC 58.408 40.000 7.93 0.00 0.00 3.06
5186 5367 5.471456 CCCTGGAATTCAACTATACATCTGC 59.529 44.000 7.93 0.00 0.00 4.26
5188 5369 5.376625 TGGAATTCAACTATACATCTGCCC 58.623 41.667 7.93 0.00 0.00 5.36
5198 5379 2.592102 ACATCTGCCCATTTCAGTGT 57.408 45.000 0.00 0.00 33.48 3.55
5226 5407 6.756542 ACTGCTAAACCATCACTTTGTTTTTC 59.243 34.615 0.00 0.00 34.33 2.29
5239 5421 7.122650 TCACTTTGTTTTTCTCCACATCTTCTT 59.877 33.333 0.00 0.00 0.00 2.52
5293 5482 7.380065 GTCTTTCACTCGTAGCATTTAGGATAG 59.620 40.741 0.00 0.00 0.00 2.08
5296 5485 5.048643 TCACTCGTAGCATTTAGGATAGCTC 60.049 44.000 0.00 0.00 38.47 4.09
5394 5583 1.134788 GTTCTCGTTGTCGGGGATGAT 60.135 52.381 0.00 0.00 38.21 2.45
5490 5680 9.770503 CATTTTGCAAGTATCTATCTATGCATC 57.229 33.333 0.19 0.00 42.64 3.91
5495 5685 8.033626 TGCAAGTATCTATCTATGCATCTGAAG 58.966 37.037 0.19 0.00 38.73 3.02
5496 5686 7.492020 GCAAGTATCTATCTATGCATCTGAAGG 59.508 40.741 0.19 1.25 34.10 3.46
5511 5701 9.781834 TGCATCTGAAGGTATAAAAATTAAACG 57.218 29.630 0.00 0.00 0.00 3.60
5530 5722 2.289072 ACGTTTGGATCTGGACAGACTG 60.289 50.000 3.82 0.00 40.75 3.51
5589 5781 2.679716 GCTTGGAGCCCTGATGGT 59.320 61.111 0.00 0.00 34.48 3.55
5631 5823 2.125106 GACAGGACATGCCGGGTC 60.125 66.667 2.18 1.48 43.43 4.46
5850 6042 2.842462 AGCCCTGACACGGACACA 60.842 61.111 0.00 0.00 0.00 3.72
5880 6072 1.633945 GGTGTTTGGGACAGGACCTAT 59.366 52.381 0.00 0.00 42.39 2.57
5982 6174 0.179020 TTGGGCCTCTTGTGTGTCAG 60.179 55.000 4.53 0.00 0.00 3.51
5984 6176 0.685097 GGGCCTCTTGTGTGTCAGTA 59.315 55.000 0.84 0.00 0.00 2.74
5985 6177 1.279271 GGGCCTCTTGTGTGTCAGTAT 59.721 52.381 0.84 0.00 0.00 2.12
6155 6349 9.445878 GTAAGTTATGTTTCTAGGGCTAGTTTT 57.554 33.333 0.00 0.00 34.84 2.43
6167 6361 5.196695 AGGGCTAGTTTTCTCCATGAATTC 58.803 41.667 0.00 0.00 34.24 2.17
6172 6366 6.706270 GCTAGTTTTCTCCATGAATTCGGATA 59.294 38.462 0.04 0.00 34.24 2.59
6214 6411 1.230635 ACCGTGAACATCTGCTGCAC 61.231 55.000 0.00 0.00 0.00 4.57
6225 6422 0.882042 CTGCTGCACTGACCGAAACT 60.882 55.000 0.00 0.00 0.00 2.66
6306 6503 3.688694 TGAGCCGTTATACACCTGTTT 57.311 42.857 0.00 0.00 0.00 2.83
6413 6610 2.791004 GTCAGCAAAACAACTGCATGTC 59.209 45.455 0.00 0.00 42.48 3.06
6422 6619 2.815211 CTGCATGTCCCCACGTCG 60.815 66.667 0.00 0.00 0.00 5.12
6434 6631 0.597637 CCACGTCGTTGACTGAGCTT 60.598 55.000 0.00 0.00 0.00 3.74
6437 6634 2.594654 CACGTCGTTGACTGAGCTTATC 59.405 50.000 0.00 0.00 0.00 1.75
6439 6636 3.102276 CGTCGTTGACTGAGCTTATCTC 58.898 50.000 0.00 0.00 42.23 2.75
6506 6703 0.940126 CCATAGCAGTGCGTCCATTC 59.060 55.000 10.00 0.00 0.00 2.67
6614 6819 6.320171 GCGGGAAACTATTAAAAAGAGAACC 58.680 40.000 0.00 0.00 0.00 3.62
6619 6824 9.511272 GGAAACTATTAAAAAGAGAACCACCTA 57.489 33.333 0.00 0.00 0.00 3.08
6653 6865 6.573617 AAACTAAATTTAGCAATCGCATGC 57.426 33.333 22.45 7.91 46.78 4.06
6707 6919 7.370383 TGGACAACTTGAAATTTATCAGAAGC 58.630 34.615 0.00 0.00 0.00 3.86
6753 6965 6.078456 TCTTGAGGTCAATGAATGGGTATT 57.922 37.500 0.00 0.00 35.02 1.89
6765 6977 8.711457 CAATGAATGGGTATTTGTCAAAACTTC 58.289 33.333 1.31 4.05 0.00 3.01
6784 6996 6.469782 ACTTCCATTTGCAAGAAAAGAAGA 57.530 33.333 22.57 0.19 0.00 2.87
6796 7008 5.957842 AGAAAAGAAGACACAAACACACA 57.042 34.783 0.00 0.00 0.00 3.72
6798 7010 6.924111 AGAAAAGAAGACACAAACACACAAT 58.076 32.000 0.00 0.00 0.00 2.71
6799 7011 7.378181 AGAAAAGAAGACACAAACACACAATT 58.622 30.769 0.00 0.00 0.00 2.32
6804 7016 7.826690 AGAAGACACAAACACACAATTAGTTT 58.173 30.769 0.00 0.00 36.00 2.66
6805 7017 8.303876 AGAAGACACAAACACACAATTAGTTTT 58.696 29.630 0.00 0.00 33.54 2.43
6806 7018 8.460831 AAGACACAAACACACAATTAGTTTTC 57.539 30.769 0.00 0.00 33.54 2.29
6807 7019 7.598278 AGACACAAACACACAATTAGTTTTCA 58.402 30.769 0.00 0.00 33.54 2.69
6883 7095 2.840974 AAGTTCCGCTTCATCCACG 58.159 52.632 0.00 0.00 30.06 4.94
6890 7104 1.796796 GCTTCATCCACGCCAGAAC 59.203 57.895 0.00 0.00 0.00 3.01
6931 7145 4.319139 AGATGAGACAATGAGATCACCG 57.681 45.455 0.00 0.00 0.00 4.94
6932 7146 3.703556 AGATGAGACAATGAGATCACCGT 59.296 43.478 0.00 0.00 0.00 4.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 0.886490 GCGGATTGGCCTCCACATAG 60.886 60.000 11.40 0.00 34.78 2.23
130 131 2.355132 TCTCTATCTCCGCGTCAAGTTC 59.645 50.000 4.92 0.00 0.00 3.01
142 143 3.157087 CAGCCTCCTCCTTCTCTATCTC 58.843 54.545 0.00 0.00 0.00 2.75
148 149 0.325203 ACTCCAGCCTCCTCCTTCTC 60.325 60.000 0.00 0.00 0.00 2.87
151 152 1.614824 CCACTCCAGCCTCCTCCTT 60.615 63.158 0.00 0.00 0.00 3.36
162 163 2.363018 CTCCGGCTCTCCACTCCA 60.363 66.667 0.00 0.00 0.00 3.86
180 181 2.289694 GGTACATGGGTGGCAGCTATAG 60.290 54.545 15.31 11.91 0.00 1.31
181 182 1.697432 GGTACATGGGTGGCAGCTATA 59.303 52.381 15.31 3.41 0.00 1.31
182 183 0.474184 GGTACATGGGTGGCAGCTAT 59.526 55.000 17.16 13.56 0.00 2.97
183 184 1.632018 GGGTACATGGGTGGCAGCTA 61.632 60.000 17.16 11.47 0.00 3.32
184 185 2.677228 GGTACATGGGTGGCAGCT 59.323 61.111 17.16 0.00 0.00 4.24
185 186 2.440247 GGGTACATGGGTGGCAGC 60.440 66.667 8.47 8.47 0.00 5.25
186 187 1.378514 GTGGGTACATGGGTGGCAG 60.379 63.158 0.00 0.00 0.00 4.85
191 192 2.966732 CGGCTGTGGGTACATGGGT 61.967 63.158 0.00 0.00 35.97 4.51
204 205 3.335356 AATCTCTGTGCCCCGGCTG 62.335 63.158 7.35 0.00 42.51 4.85
233 234 0.174389 ACGTAGCTACTCCTCGTCGA 59.826 55.000 21.20 0.00 0.00 4.20
274 275 5.969423 ACTCAAATCCATACAAAAGCATGG 58.031 37.500 0.00 0.00 42.67 3.66
297 298 6.126911 TGCATCCACACACCTCATACTAAATA 60.127 38.462 0.00 0.00 0.00 1.40
310 311 1.024271 ACACAACTGCATCCACACAC 58.976 50.000 0.00 0.00 0.00 3.82
314 315 5.527951 TCAAATTAACACAACTGCATCCAC 58.472 37.500 0.00 0.00 0.00 4.02
339 340 2.728225 CGCGAGTAATGACGAGACACTT 60.728 50.000 0.00 0.00 0.00 3.16
344 345 1.089112 TTCCGCGAGTAATGACGAGA 58.911 50.000 8.23 0.00 0.00 4.04
347 348 0.293723 CGTTTCCGCGAGTAATGACG 59.706 55.000 8.23 4.18 0.00 4.35
367 368 0.731514 GACAAATCGACACGCTCGGA 60.732 55.000 3.50 0.00 43.16 4.55
375 376 5.660460 ACAGCAGTATATGACAAATCGACA 58.340 37.500 0.00 0.00 0.00 4.35
391 392 7.013846 GGAGTACTTAAGATCATCTACAGCAGT 59.986 40.741 10.09 0.00 0.00 4.40
393 394 6.265649 GGGAGTACTTAAGATCATCTACAGCA 59.734 42.308 10.09 0.00 0.00 4.41
410 411 4.162698 TGCACCGTATTAAATGGGAGTACT 59.837 41.667 0.00 0.00 38.76 2.73
868 875 5.502079 ACACATCAATTTCATAACCCCGTA 58.498 37.500 0.00 0.00 0.00 4.02
902 909 6.360370 TTCTAGAGCAGTTCCACAATAGTT 57.640 37.500 0.00 0.00 0.00 2.24
935 942 2.088950 ACATAAACGGACAACCCTCG 57.911 50.000 0.00 0.00 0.00 4.63
938 945 4.022676 ACATGAAACATAAACGGACAACCC 60.023 41.667 0.00 0.00 0.00 4.11
942 949 5.529430 ACAAGACATGAAACATAAACGGACA 59.471 36.000 0.00 0.00 0.00 4.02
962 969 2.159841 CGTGACAGCGGTAATCAACAAG 60.160 50.000 2.59 0.00 0.00 3.16
981 988 3.630013 TCTCAGGCCTGCAAGCGT 61.630 61.111 28.91 0.00 0.00 5.07
1219 1227 1.064758 TGCCTCACAAGTCAACAACCT 60.065 47.619 0.00 0.00 0.00 3.50
1235 1243 6.491403 CCCTTCACTGCTTAATTAATATGCCT 59.509 38.462 0.00 0.00 34.58 4.75
1236 1244 6.490040 TCCCTTCACTGCTTAATTAATATGCC 59.510 38.462 0.00 0.00 34.58 4.40
1242 1250 9.832445 CTAGTTATCCCTTCACTGCTTAATTAA 57.168 33.333 0.00 0.00 0.00 1.40
1243 1251 8.429641 CCTAGTTATCCCTTCACTGCTTAATTA 58.570 37.037 0.00 0.00 0.00 1.40
1244 1252 7.283329 CCTAGTTATCCCTTCACTGCTTAATT 58.717 38.462 0.00 0.00 0.00 1.40
1310 1318 4.955811 TGAAAGTCTGGTGTCACACTAT 57.044 40.909 8.12 0.00 34.40 2.12
1324 1332 5.065346 GGCTTGTAGCTATCCTTTGAAAGTC 59.935 44.000 4.02 0.00 41.99 3.01
1411 1419 9.492973 GTTAAGAACTACACCCAAGTTATACAA 57.507 33.333 0.00 0.00 37.31 2.41
1428 1436 3.503800 AGGAAAAGGCCGTTAAGAACT 57.496 42.857 3.72 0.00 0.00 3.01
1429 1437 5.183969 AGATAGGAAAAGGCCGTTAAGAAC 58.816 41.667 3.72 0.00 0.00 3.01
1430 1438 5.431179 AGATAGGAAAAGGCCGTTAAGAA 57.569 39.130 3.72 0.00 0.00 2.52
1432 1440 6.374613 AGAAAAGATAGGAAAAGGCCGTTAAG 59.625 38.462 3.72 0.00 0.00 1.85
1433 1441 6.243148 AGAAAAGATAGGAAAAGGCCGTTAA 58.757 36.000 3.72 0.00 0.00 2.01
1434 1442 5.812286 AGAAAAGATAGGAAAAGGCCGTTA 58.188 37.500 3.72 0.00 0.00 3.18
1438 1446 5.750524 AGAGAGAAAAGATAGGAAAAGGCC 58.249 41.667 0.00 0.00 0.00 5.19
1463 1471 6.695292 AATTTTATGAAAGTTCAGCAAGCG 57.305 33.333 0.00 0.00 41.08 4.68
1561 1570 5.316158 AGCTCTGGTGGCTCAAAATATAT 57.684 39.130 0.00 0.00 34.70 0.86
1565 1574 3.009473 TCTTAGCTCTGGTGGCTCAAAAT 59.991 43.478 0.00 0.00 40.74 1.82
1630 1639 5.304101 ACAAGCAATGGGAATAGTCAAACAA 59.696 36.000 0.00 0.00 0.00 2.83
1822 1831 6.504398 TGCAGAATTAGGTATGTTCTCGTAG 58.496 40.000 0.00 0.00 30.19 3.51
1831 1840 5.355071 TGCTGTTTCTGCAGAATTAGGTATG 59.645 40.000 28.89 13.95 38.70 2.39
1832 1841 5.500234 TGCTGTTTCTGCAGAATTAGGTAT 58.500 37.500 28.89 0.00 38.70 2.73
1866 1875 9.541143 CCACACAAATTAACTTATTTGAAAGGT 57.459 29.630 14.08 0.00 44.49 3.50
2064 2073 7.012894 TGTCAAAAACGCTCTTATATTATGGGG 59.987 37.037 0.00 0.00 0.00 4.96
2093 2102 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
2234 2243 5.148568 GCAATTGAACAAATGCACCATTTC 58.851 37.500 18.64 0.00 44.35 2.17
2266 2275 9.210426 GTGTATGAACATTTAGATAAAACTGCG 57.790 33.333 0.00 0.00 38.08 5.18
2344 2354 1.059098 TCTGATCACTGGGCACTTGT 58.941 50.000 0.00 0.00 0.00 3.16
2360 2370 8.441608 CAGAGGCAAATATAGATCGAATTTCTG 58.558 37.037 0.00 0.00 0.00 3.02
2362 2372 8.316640 ACAGAGGCAAATATAGATCGAATTTC 57.683 34.615 0.00 0.00 0.00 2.17
2438 2448 5.128919 AGAGCAGGTTGGCTATGATTTAAG 58.871 41.667 0.00 0.00 45.99 1.85
2449 2459 0.877743 GAAGTTGAGAGCAGGTTGGC 59.122 55.000 0.00 0.00 0.00 4.52
2463 2473 9.646427 GTGATAATAGTGAACTGAAGAGAAGTT 57.354 33.333 0.00 0.00 40.54 2.66
2492 2502 6.028146 ACACAAACATTGCACATACATCAT 57.972 33.333 0.00 0.00 0.00 2.45
2524 2534 6.600822 AGCACAAATGTAGAGTTATGAGCAAT 59.399 34.615 0.00 0.00 0.00 3.56
2526 2536 5.491070 AGCACAAATGTAGAGTTATGAGCA 58.509 37.500 0.00 0.00 0.00 4.26
2536 2546 7.165485 AGGTATTGTACAAGCACAAATGTAGA 58.835 34.615 14.65 0.00 41.50 2.59
2578 2588 1.927174 CAGAATTGACCCGTTCTAGCG 59.073 52.381 0.00 0.00 33.57 4.26
2587 2597 4.938226 CCTGAAGAACTACAGAATTGACCC 59.062 45.833 0.00 0.00 36.38 4.46
2619 2629 7.502895 CCCTAGTACTGCTATCTGTTAGAAGAA 59.497 40.741 5.39 0.00 35.77 2.52
2623 2633 6.511017 TCCCTAGTACTGCTATCTGTTAGA 57.489 41.667 5.39 0.00 0.00 2.10
2624 2634 6.207810 CCTTCCCTAGTACTGCTATCTGTTAG 59.792 46.154 5.39 0.00 0.00 2.34
2626 2636 4.896482 CCTTCCCTAGTACTGCTATCTGTT 59.104 45.833 5.39 0.00 0.00 3.16
2627 2637 4.475345 CCTTCCCTAGTACTGCTATCTGT 58.525 47.826 5.39 0.00 0.00 3.41
2628 2638 3.829601 CCCTTCCCTAGTACTGCTATCTG 59.170 52.174 5.39 0.00 0.00 2.90
2629 2639 3.181416 CCCCTTCCCTAGTACTGCTATCT 60.181 52.174 5.39 0.00 0.00 1.98
2630 2640 3.166679 CCCCTTCCCTAGTACTGCTATC 58.833 54.545 5.39 0.00 0.00 2.08
2631 2641 2.158143 CCCCCTTCCCTAGTACTGCTAT 60.158 54.545 5.39 0.00 0.00 2.97
2632 2642 1.219724 CCCCCTTCCCTAGTACTGCTA 59.780 57.143 5.39 0.00 0.00 3.49
2633 2643 0.031010 CCCCCTTCCCTAGTACTGCT 60.031 60.000 5.39 0.00 0.00 4.24
2634 2644 0.031414 TCCCCCTTCCCTAGTACTGC 60.031 60.000 5.39 0.00 0.00 4.40
2635 2645 2.117051 GTTCCCCCTTCCCTAGTACTG 58.883 57.143 5.39 0.00 0.00 2.74
2636 2646 1.726352 TGTTCCCCCTTCCCTAGTACT 59.274 52.381 0.00 0.00 0.00 2.73
2637 2647 2.117051 CTGTTCCCCCTTCCCTAGTAC 58.883 57.143 0.00 0.00 0.00 2.73
2638 2648 1.726352 ACTGTTCCCCCTTCCCTAGTA 59.274 52.381 0.00 0.00 0.00 1.82
2639 2649 0.496841 ACTGTTCCCCCTTCCCTAGT 59.503 55.000 0.00 0.00 0.00 2.57
2640 2650 1.205055 GACTGTTCCCCCTTCCCTAG 58.795 60.000 0.00 0.00 0.00 3.02
2641 2651 0.253020 GGACTGTTCCCCCTTCCCTA 60.253 60.000 0.00 0.00 35.57 3.53
2642 2652 1.541620 GGACTGTTCCCCCTTCCCT 60.542 63.158 0.00 0.00 35.57 4.20
2690 2700 4.006319 GGTCATAAAGATGGCTATCAGGC 58.994 47.826 13.04 0.00 37.83 4.85
2746 2756 5.073008 AGGCACCCCTTCAATTAATTGTTTT 59.927 36.000 23.95 5.26 38.74 2.43
2828 2838 5.400066 TTTTCACACAGTCGATCCATCTA 57.600 39.130 0.00 0.00 0.00 1.98
2977 2994 5.562506 ACATGCAGAATCATGAAACAGAG 57.437 39.130 0.00 0.00 44.94 3.35
3023 3040 1.708341 ACAAGCAGCCTCCACATTTT 58.292 45.000 0.00 0.00 0.00 1.82
3045 3062 8.409358 AATAAAGGAGCATCAACTAAAACTGT 57.591 30.769 0.00 0.00 36.25 3.55
3112 3129 1.070289 TCAGCTGCAGCCATAGATCAG 59.930 52.381 34.39 13.12 43.38 2.90
3114 3131 1.343789 TCTCAGCTGCAGCCATAGATC 59.656 52.381 34.39 5.26 43.38 2.75
3122 3139 5.505324 CCATACTAAATTTCTCAGCTGCAGC 60.505 44.000 31.53 31.53 42.49 5.25
3179 3196 2.094182 CCAGTGTAGCACCGAGTAATGT 60.094 50.000 0.00 0.00 34.49 2.71
3206 3223 1.768275 TCTGTGTCCACACCACTCAAT 59.232 47.619 7.38 0.00 45.88 2.57
3332 3356 7.223971 CCTGGATGTTTCTGCAATGAAATAATG 59.776 37.037 4.62 0.00 38.09 1.90
3440 3464 3.778954 ACCTTGCATATTAGCTCTCCC 57.221 47.619 0.00 0.00 34.99 4.30
3458 3482 5.978814 ACAAAGTGATACAGTGATCCTACC 58.021 41.667 0.00 0.00 0.00 3.18
3506 3530 3.450817 TCAATTGCGAGATAGAACTCCCA 59.549 43.478 0.00 0.00 33.83 4.37
3567 3591 1.599542 GCAGGGTAAGATGATTGTCGC 59.400 52.381 0.00 0.00 0.00 5.19
3596 3620 3.270169 TGATGGTCACTGGTAGGGTACTA 59.730 47.826 0.00 0.00 0.00 1.82
3619 3643 1.376037 GAGGCAGGAGAAACACCGG 60.376 63.158 0.00 0.00 0.00 5.28
3621 3645 0.398318 AGTGAGGCAGGAGAAACACC 59.602 55.000 0.00 0.00 0.00 4.16
3640 3668 1.356398 GGGAAATTGTAGGGTGGGTGA 59.644 52.381 0.00 0.00 0.00 4.02
3662 3690 1.143684 TGAAAGATGGGCTGATAGGGC 59.856 52.381 0.00 0.00 0.00 5.19
3666 3694 4.454678 GACACATGAAAGATGGGCTGATA 58.545 43.478 0.00 0.00 0.00 2.15
3668 3696 2.618816 GGACACATGAAAGATGGGCTGA 60.619 50.000 0.00 0.00 0.00 4.26
3670 3698 1.355381 TGGACACATGAAAGATGGGCT 59.645 47.619 0.00 0.00 0.00 5.19
3687 3715 1.220749 GCTACCGATGGCAGTTGGA 59.779 57.895 9.15 0.00 31.28 3.53
3731 3760 4.048470 GTGAACAGGGGGAGGGGC 62.048 72.222 0.00 0.00 0.00 5.80
3759 3788 0.250901 GGAAAAGCCAGTGCAGAGGA 60.251 55.000 8.50 0.00 41.13 3.71
3764 3793 2.203625 GGGGGAAAAGCCAGTGCA 60.204 61.111 0.00 0.00 41.13 4.57
3771 3800 1.478105 CTATGCACAAGGGGGAAAAGC 59.522 52.381 0.00 0.00 0.00 3.51
3775 3804 1.992557 AGAACTATGCACAAGGGGGAA 59.007 47.619 0.00 0.00 0.00 3.97
3780 3809 2.959516 TCACGAGAACTATGCACAAGG 58.040 47.619 0.00 0.00 0.00 3.61
3809 3838 1.343069 GAGGAGGTTCTGTCAGGTGT 58.657 55.000 0.00 0.00 0.00 4.16
3829 3858 1.284198 AGCAGGACCTTCAGATTGCAT 59.716 47.619 0.00 0.00 34.17 3.96
3845 3874 1.214589 GGGCATTGCAGTCAAGCAG 59.785 57.895 11.39 0.00 46.54 4.24
3847 3876 1.980772 AGGGGCATTGCAGTCAAGC 60.981 57.895 11.39 0.00 35.37 4.01
3877 3906 0.955428 TCCACAGAACGCAAGCCATC 60.955 55.000 0.00 0.00 45.62 3.51
3887 3916 4.201724 GCAGACAATTCGTATCCACAGAAC 60.202 45.833 0.00 0.00 0.00 3.01
3908 3937 6.490040 GGGAACTATAAAGATAAATGCCTGCA 59.510 38.462 0.00 0.00 0.00 4.41
3948 3977 5.591877 TCGGAGGTAGTAACAAATAGGAGAC 59.408 44.000 0.00 0.00 0.00 3.36
3952 3981 5.303589 TGGATCGGAGGTAGTAACAAATAGG 59.696 44.000 0.00 0.00 0.00 2.57
3957 4061 5.657745 TGTTATGGATCGGAGGTAGTAACAA 59.342 40.000 0.00 0.00 30.53 2.83
3959 4063 5.779529 TGTTATGGATCGGAGGTAGTAAC 57.220 43.478 0.00 0.00 0.00 2.50
3961 4065 5.301045 CACTTGTTATGGATCGGAGGTAGTA 59.699 44.000 0.00 0.00 0.00 1.82
3962 4066 4.099573 CACTTGTTATGGATCGGAGGTAGT 59.900 45.833 0.00 0.00 0.00 2.73
3963 4067 4.099573 ACACTTGTTATGGATCGGAGGTAG 59.900 45.833 0.00 0.00 0.00 3.18
3964 4068 4.028131 ACACTTGTTATGGATCGGAGGTA 58.972 43.478 0.00 0.00 0.00 3.08
3965 4069 2.838202 ACACTTGTTATGGATCGGAGGT 59.162 45.455 0.00 0.00 0.00 3.85
3966 4070 3.458189 GACACTTGTTATGGATCGGAGG 58.542 50.000 0.00 0.00 0.00 4.30
3967 4071 3.116300 CGACACTTGTTATGGATCGGAG 58.884 50.000 0.00 0.00 0.00 4.63
3968 4072 2.737359 GCGACACTTGTTATGGATCGGA 60.737 50.000 0.00 0.00 0.00 4.55
3969 4073 1.593006 GCGACACTTGTTATGGATCGG 59.407 52.381 0.00 0.00 0.00 4.18
3970 4074 2.267426 TGCGACACTTGTTATGGATCG 58.733 47.619 0.00 0.00 0.00 3.69
3971 4075 3.262420 ACTGCGACACTTGTTATGGATC 58.738 45.455 0.00 0.00 0.00 3.36
3972 4076 3.334583 ACTGCGACACTTGTTATGGAT 57.665 42.857 0.00 0.00 0.00 3.41
3973 4077 2.831685 ACTGCGACACTTGTTATGGA 57.168 45.000 0.00 0.00 0.00 3.41
3974 4078 3.896648 AAACTGCGACACTTGTTATGG 57.103 42.857 0.00 0.00 0.00 2.74
3975 4079 4.843147 TCAAAACTGCGACACTTGTTATG 58.157 39.130 0.00 0.00 0.00 1.90
3976 4080 5.065988 AGTTCAAAACTGCGACACTTGTTAT 59.934 36.000 0.00 0.00 41.01 1.89
3977 4081 4.393680 AGTTCAAAACTGCGACACTTGTTA 59.606 37.500 0.00 0.00 41.01 2.41
3978 4082 3.190535 AGTTCAAAACTGCGACACTTGTT 59.809 39.130 0.00 0.00 41.01 2.83
3979 4083 2.747446 AGTTCAAAACTGCGACACTTGT 59.253 40.909 0.00 0.00 41.01 3.16
3980 4084 3.405170 AGTTCAAAACTGCGACACTTG 57.595 42.857 0.00 0.00 41.01 3.16
3981 4085 4.201881 GGTTAGTTCAAAACTGCGACACTT 60.202 41.667 2.65 0.00 42.84 3.16
3982 4086 3.311596 GGTTAGTTCAAAACTGCGACACT 59.688 43.478 2.65 0.00 42.84 3.55
3983 4087 3.311596 AGGTTAGTTCAAAACTGCGACAC 59.688 43.478 2.65 0.00 42.84 3.67
3984 4088 3.311322 CAGGTTAGTTCAAAACTGCGACA 59.689 43.478 2.65 0.00 42.84 4.35
3985 4089 3.558418 TCAGGTTAGTTCAAAACTGCGAC 59.442 43.478 2.65 0.00 42.74 5.19
3986 4090 3.799366 TCAGGTTAGTTCAAAACTGCGA 58.201 40.909 2.65 0.00 42.74 5.10
3987 4091 3.560068 ACTCAGGTTAGTTCAAAACTGCG 59.440 43.478 2.65 0.00 42.74 5.18
3988 4092 5.500645 AACTCAGGTTAGTTCAAAACTGC 57.499 39.130 2.65 0.00 42.74 4.40
3997 4101 4.035208 CGCAGTTTTGAACTCAGGTTAGTT 59.965 41.667 0.00 0.00 40.46 2.24
3998 4102 3.560068 CGCAGTTTTGAACTCAGGTTAGT 59.440 43.478 0.00 0.00 40.46 2.24
3999 4103 3.807622 TCGCAGTTTTGAACTCAGGTTAG 59.192 43.478 0.00 0.00 40.46 2.34
4000 4104 3.558418 GTCGCAGTTTTGAACTCAGGTTA 59.442 43.478 0.00 0.00 40.46 2.85
4001 4105 2.354821 GTCGCAGTTTTGAACTCAGGTT 59.645 45.455 0.00 0.00 40.46 3.50
4002 4106 1.940613 GTCGCAGTTTTGAACTCAGGT 59.059 47.619 0.00 0.00 40.46 4.00
4003 4107 1.939934 TGTCGCAGTTTTGAACTCAGG 59.060 47.619 0.00 0.00 40.46 3.86
4004 4108 2.609459 AGTGTCGCAGTTTTGAACTCAG 59.391 45.455 0.00 0.00 40.46 3.35
4005 4109 2.627945 AGTGTCGCAGTTTTGAACTCA 58.372 42.857 0.00 0.00 40.46 3.41
4006 4110 3.675467 AAGTGTCGCAGTTTTGAACTC 57.325 42.857 0.00 0.00 40.46 3.01
4007 4111 5.751243 AATAAGTGTCGCAGTTTTGAACT 57.249 34.783 5.46 0.00 44.06 3.01
4008 4112 6.291585 CCAAAATAAGTGTCGCAGTTTTGAAC 60.292 38.462 16.09 0.00 38.26 3.18
4009 4113 5.746245 CCAAAATAAGTGTCGCAGTTTTGAA 59.254 36.000 16.09 0.00 38.26 2.69
4010 4114 5.066634 TCCAAAATAAGTGTCGCAGTTTTGA 59.933 36.000 16.09 6.08 38.26 2.69
4011 4115 5.277825 TCCAAAATAAGTGTCGCAGTTTTG 58.722 37.500 5.46 11.07 36.70 2.44
4012 4116 5.508200 TCCAAAATAAGTGTCGCAGTTTT 57.492 34.783 5.46 0.00 0.00 2.43
4013 4117 5.616866 CGATCCAAAATAAGTGTCGCAGTTT 60.617 40.000 5.46 0.00 0.00 2.66
4014 4118 4.142902 CGATCCAAAATAAGTGTCGCAGTT 60.143 41.667 5.48 5.48 0.00 3.16
4015 4119 3.370978 CGATCCAAAATAAGTGTCGCAGT 59.629 43.478 0.00 0.00 0.00 4.40
4016 4120 3.242413 CCGATCCAAAATAAGTGTCGCAG 60.242 47.826 0.00 0.00 0.00 5.18
4017 4121 2.675844 CCGATCCAAAATAAGTGTCGCA 59.324 45.455 0.00 0.00 0.00 5.10
4018 4122 2.933906 TCCGATCCAAAATAAGTGTCGC 59.066 45.455 0.00 0.00 0.00 5.19
4019 4123 3.555956 CCTCCGATCCAAAATAAGTGTCG 59.444 47.826 0.00 0.00 0.00 4.35
4020 4124 3.877508 CCCTCCGATCCAAAATAAGTGTC 59.122 47.826 0.00 0.00 0.00 3.67
4021 4125 3.521937 TCCCTCCGATCCAAAATAAGTGT 59.478 43.478 0.00 0.00 0.00 3.55
4022 4126 4.130118 CTCCCTCCGATCCAAAATAAGTG 58.870 47.826 0.00 0.00 0.00 3.16
4023 4127 3.780850 ACTCCCTCCGATCCAAAATAAGT 59.219 43.478 0.00 0.00 0.00 2.24
4024 4128 4.423625 ACTCCCTCCGATCCAAAATAAG 57.576 45.455 0.00 0.00 0.00 1.73
4025 4129 7.808279 ATATACTCCCTCCGATCCAAAATAA 57.192 36.000 0.00 0.00 0.00 1.40
4027 4131 7.996758 ATATATACTCCCTCCGATCCAAAAT 57.003 36.000 0.00 0.00 0.00 1.82
4028 4132 8.924303 CATATATATACTCCCTCCGATCCAAAA 58.076 37.037 0.00 0.00 0.00 2.44
4029 4133 8.286620 TCATATATATACTCCCTCCGATCCAAA 58.713 37.037 0.00 0.00 0.00 3.28
4030 4134 7.822600 TCATATATATACTCCCTCCGATCCAA 58.177 38.462 0.00 0.00 0.00 3.53
4031 4135 7.402448 TCATATATATACTCCCTCCGATCCA 57.598 40.000 0.00 0.00 0.00 3.41
4032 4136 7.177041 GGTTCATATATATACTCCCTCCGATCC 59.823 44.444 0.00 0.00 0.00 3.36
4033 4137 7.177041 GGGTTCATATATATACTCCCTCCGATC 59.823 44.444 15.38 0.00 0.00 3.69
4034 4138 7.011382 GGGTTCATATATATACTCCCTCCGAT 58.989 42.308 15.38 0.00 0.00 4.18
4035 4139 6.068676 TGGGTTCATATATATACTCCCTCCGA 60.069 42.308 19.80 6.17 35.20 4.55
4036 4140 6.040616 GTGGGTTCATATATATACTCCCTCCG 59.959 46.154 19.80 0.00 35.20 4.63
4037 4141 7.133483 AGTGGGTTCATATATATACTCCCTCC 58.867 42.308 19.80 13.97 35.20 4.30
4038 4142 8.062536 AGAGTGGGTTCATATATATACTCCCTC 58.937 40.741 19.80 17.48 35.19 4.30
4039 4143 7.956357 AGAGTGGGTTCATATATATACTCCCT 58.044 38.462 19.80 5.47 35.19 4.20
4040 4144 8.062536 AGAGAGTGGGTTCATATATATACTCCC 58.937 40.741 13.75 14.72 35.19 4.30
4041 4145 9.482175 AAGAGAGTGGGTTCATATATATACTCC 57.518 37.037 13.75 8.28 35.19 3.85
4052 4156 9.440761 AATCTAATACTAAGAGAGTGGGTTCAT 57.559 33.333 0.00 0.00 39.39 2.57
4076 4180 9.425248 AAATGGAACCTCATCATATGTTACAAT 57.575 29.630 1.90 0.00 35.34 2.71
4082 4186 8.599624 AAGAAAAATGGAACCTCATCATATGT 57.400 30.769 1.90 0.00 0.00 2.29
4150 4289 0.800631 CAGCACATTCGCACACATCT 59.199 50.000 0.00 0.00 0.00 2.90
4155 4294 0.516877 GCTAACAGCACATTCGCACA 59.483 50.000 0.00 0.00 41.89 4.57
4159 4298 6.111768 AGAAAATAGCTAACAGCACATTCG 57.888 37.500 0.00 0.00 45.56 3.34
4222 4361 4.905866 CACAGAATTTGTAACTGAACAGCG 59.094 41.667 0.00 0.00 38.16 5.18
4231 4370 7.927048 AGTTACTTGTCCACAGAATTTGTAAC 58.073 34.615 0.00 0.00 38.16 2.50
4277 4416 9.390795 CACAAATATATTTCAGCATACTCAAGC 57.609 33.333 7.76 0.00 0.00 4.01
4459 4608 5.903764 TGTTCCGCAAAATTGAATCTTTG 57.096 34.783 0.00 7.82 35.95 2.77
4471 4620 4.278170 ACTGATGAAAGAATGTTCCGCAAA 59.722 37.500 0.00 0.00 0.00 3.68
4476 4625 4.616835 GCACCACTGATGAAAGAATGTTCC 60.617 45.833 0.00 0.00 0.00 3.62
4487 4636 0.764271 TTGTCCTGCACCACTGATGA 59.236 50.000 0.00 0.00 0.00 2.92
4488 4637 1.608055 TTTGTCCTGCACCACTGATG 58.392 50.000 0.00 0.00 0.00 3.07
4489 4638 2.158623 TCTTTTGTCCTGCACCACTGAT 60.159 45.455 0.00 0.00 0.00 2.90
4490 4639 1.211703 TCTTTTGTCCTGCACCACTGA 59.788 47.619 0.00 0.00 0.00 3.41
4491 4640 1.679139 TCTTTTGTCCTGCACCACTG 58.321 50.000 0.00 0.00 0.00 3.66
4492 4641 2.664402 ATCTTTTGTCCTGCACCACT 57.336 45.000 0.00 0.00 0.00 4.00
4493 4642 4.518970 TCTTAATCTTTTGTCCTGCACCAC 59.481 41.667 0.00 0.00 0.00 4.16
4494 4643 4.724399 TCTTAATCTTTTGTCCTGCACCA 58.276 39.130 0.00 0.00 0.00 4.17
4495 4644 5.705609 TTCTTAATCTTTTGTCCTGCACC 57.294 39.130 0.00 0.00 0.00 5.01
4496 4645 6.739112 AGTTTCTTAATCTTTTGTCCTGCAC 58.261 36.000 0.00 0.00 0.00 4.57
4497 4646 6.959639 AGTTTCTTAATCTTTTGTCCTGCA 57.040 33.333 0.00 0.00 0.00 4.41
4498 4647 7.024171 GCTAGTTTCTTAATCTTTTGTCCTGC 58.976 38.462 0.00 0.00 0.00 4.85
4499 4648 8.233190 CAGCTAGTTTCTTAATCTTTTGTCCTG 58.767 37.037 0.00 0.00 0.00 3.86
4500 4649 7.391833 CCAGCTAGTTTCTTAATCTTTTGTCCT 59.608 37.037 0.00 0.00 0.00 3.85
4501 4650 7.390718 TCCAGCTAGTTTCTTAATCTTTTGTCC 59.609 37.037 0.00 0.00 0.00 4.02
4502 4651 8.231161 GTCCAGCTAGTTTCTTAATCTTTTGTC 58.769 37.037 0.00 0.00 0.00 3.18
4503 4652 7.939588 AGTCCAGCTAGTTTCTTAATCTTTTGT 59.060 33.333 0.00 0.00 0.00 2.83
4504 4653 8.233190 CAGTCCAGCTAGTTTCTTAATCTTTTG 58.767 37.037 0.00 0.00 0.00 2.44
4554 4703 7.814587 CCCAACATTCTAATGAAAGAAGTTTCC 59.185 37.037 9.60 0.00 41.37 3.13
4556 4705 8.477419 TCCCAACATTCTAATGAAAGAAGTTT 57.523 30.769 9.60 0.00 38.81 2.66
4562 4711 6.494893 TCGTTCCCAACATTCTAATGAAAG 57.505 37.500 9.60 0.00 39.67 2.62
4569 4718 2.565391 TGAGCTCGTTCCCAACATTCTA 59.435 45.455 9.64 0.00 0.00 2.10
4578 4727 5.406780 CAGTTATTGATATGAGCTCGTTCCC 59.593 44.000 14.93 4.49 0.00 3.97
4599 4748 3.638160 TCAAAAGAATTCTTGGCAGCAGT 59.362 39.130 21.15 0.17 36.12 4.40
4713 4862 9.526713 CTGGTATCTTTCCATATCATATTCTCG 57.473 37.037 0.00 0.00 34.26 4.04
4762 4911 3.821033 AGAACTTACATTCACTGGCCAAC 59.179 43.478 7.01 0.00 0.00 3.77
4820 4972 8.526667 AGAAGTATTGCTCTAGATGAAGTACA 57.473 34.615 0.00 0.00 0.00 2.90
4873 5025 8.212995 AGGAAACCATTTCATGAAGACAAAAAT 58.787 29.630 8.41 0.00 41.43 1.82
4923 5077 5.221561 TGACCCGTCAGTTCAGAAGATTTAA 60.222 40.000 0.00 0.00 34.14 1.52
4932 5086 1.202651 AGGTTTGACCCGTCAGTTCAG 60.203 52.381 0.00 0.00 39.75 3.02
4941 5095 1.404315 GCAGACTCTAGGTTTGACCCG 60.404 57.143 6.20 0.00 39.75 5.28
4942 5096 1.066071 GGCAGACTCTAGGTTTGACCC 60.066 57.143 6.20 0.00 39.75 4.46
4969 5123 2.858344 CGACTATACTTTGGTTGCCTCG 59.142 50.000 0.00 0.00 0.00 4.63
4984 5138 7.658261 TGATTGGATTAGATTTCGTCGACTAT 58.342 34.615 14.70 4.21 0.00 2.12
4987 5141 5.977725 TCTGATTGGATTAGATTTCGTCGAC 59.022 40.000 5.18 5.18 0.00 4.20
4992 5146 7.545362 AGTGTTCTGATTGGATTAGATTTCG 57.455 36.000 0.00 0.00 0.00 3.46
5046 5200 5.819901 GCACCAAGACTTAAGAGATAAGCAT 59.180 40.000 10.09 0.00 44.11 3.79
5053 5207 2.244695 TCGGCACCAAGACTTAAGAGA 58.755 47.619 10.09 0.00 0.00 3.10
5054 5208 2.743636 TCGGCACCAAGACTTAAGAG 57.256 50.000 10.09 0.00 0.00 2.85
5055 5209 3.244422 ACATTCGGCACCAAGACTTAAGA 60.244 43.478 10.09 0.00 0.00 2.10
5056 5210 3.074412 ACATTCGGCACCAAGACTTAAG 58.926 45.455 0.00 0.00 0.00 1.85
5057 5211 2.811431 CACATTCGGCACCAAGACTTAA 59.189 45.455 0.00 0.00 0.00 1.85
5087 5242 1.552337 TCAGCCAGAAGAGCCAGTAAG 59.448 52.381 0.00 0.00 0.00 2.34
5128 5309 5.087323 TCTTCTATAGGGTCAAGGCTATGG 58.913 45.833 0.00 0.00 0.00 2.74
5129 5310 6.351711 CCATCTTCTATAGGGTCAAGGCTATG 60.352 46.154 0.00 0.00 0.00 2.23
5130 5311 5.723887 CCATCTTCTATAGGGTCAAGGCTAT 59.276 44.000 0.00 0.00 0.00 2.97
5131 5312 5.087323 CCATCTTCTATAGGGTCAAGGCTA 58.913 45.833 0.00 0.00 0.00 3.93
5132 5313 3.906846 CCATCTTCTATAGGGTCAAGGCT 59.093 47.826 0.00 0.00 0.00 4.58
5133 5314 3.648545 ACCATCTTCTATAGGGTCAAGGC 59.351 47.826 0.00 0.00 0.00 4.35
5134 5315 4.503991 GCACCATCTTCTATAGGGTCAAGG 60.504 50.000 0.00 0.00 0.00 3.61
5135 5316 4.346418 AGCACCATCTTCTATAGGGTCAAG 59.654 45.833 0.00 0.00 0.00 3.02
5136 5317 4.298626 AGCACCATCTTCTATAGGGTCAA 58.701 43.478 0.00 0.00 0.00 3.18
5137 5318 3.928754 AGCACCATCTTCTATAGGGTCA 58.071 45.455 0.00 0.00 0.00 4.02
5138 5319 4.345257 TCAAGCACCATCTTCTATAGGGTC 59.655 45.833 0.00 0.00 0.00 4.46
5139 5320 4.101741 GTCAAGCACCATCTTCTATAGGGT 59.898 45.833 0.00 0.00 0.00 4.34
5140 5321 4.503991 GGTCAAGCACCATCTTCTATAGGG 60.504 50.000 0.00 0.00 45.98 3.53
5141 5322 4.636249 GGTCAAGCACCATCTTCTATAGG 58.364 47.826 0.00 0.00 45.98 2.57
5153 5334 1.177401 GAATTCCAGGGTCAAGCACC 58.823 55.000 0.00 0.00 45.97 5.01
5171 5352 6.000246 TGAAATGGGCAGATGTATAGTTGA 58.000 37.500 0.00 0.00 0.00 3.18
5181 5362 2.821969 GTTGACACTGAAATGGGCAGAT 59.178 45.455 0.00 0.00 36.86 2.90
5183 5364 2.233271 AGTTGACACTGAAATGGGCAG 58.767 47.619 0.00 0.00 39.26 4.85
5198 5379 4.887071 ACAAAGTGATGGTTTAGCAGTTGA 59.113 37.500 0.00 0.00 38.30 3.18
5271 5460 5.302059 AGCTATCCTAAATGCTACGAGTGAA 59.698 40.000 0.00 0.00 33.64 3.18
5277 5466 5.773575 TCAAGAGCTATCCTAAATGCTACG 58.226 41.667 0.00 0.00 35.76 3.51
5308 5497 7.777095 AGAAGGATCAGTCACTGAAACTATAC 58.223 38.462 12.63 8.24 44.04 1.47
5310 5499 6.865834 AGAAGGATCAGTCACTGAAACTAT 57.134 37.500 12.63 0.00 44.04 2.12
5319 5508 3.126831 CGCCAATAGAAGGATCAGTCAC 58.873 50.000 0.00 0.00 0.00 3.67
5394 5583 4.202080 GCATCAATAAGCAAAGCATCTGGA 60.202 41.667 0.00 0.00 0.00 3.86
5443 5633 9.606631 AAAATGCTTTAAACCTAACAAATGTGA 57.393 25.926 0.00 0.00 0.00 3.58
5472 5662 8.663209 ACCTTCAGATGCATAGATAGATACTT 57.337 34.615 0.00 0.00 0.00 2.24
5504 5694 5.411669 GTCTGTCCAGATCCAAACGTTTAAT 59.588 40.000 14.20 10.33 39.97 1.40
5506 5696 4.039973 AGTCTGTCCAGATCCAAACGTTTA 59.960 41.667 14.20 0.00 39.97 2.01
5509 5699 1.971357 AGTCTGTCCAGATCCAAACGT 59.029 47.619 0.00 0.00 39.97 3.99
5510 5700 2.289072 ACAGTCTGTCCAGATCCAAACG 60.289 50.000 0.00 0.00 39.97 3.60
5511 5701 3.409026 ACAGTCTGTCCAGATCCAAAC 57.591 47.619 0.00 0.00 39.97 2.93
5516 5706 5.083533 AGAATGAACAGTCTGTCCAGATC 57.916 43.478 5.82 2.94 39.97 2.75
5589 5781 4.395519 CCAGTGGCAAATGTCCGA 57.604 55.556 0.00 0.00 0.00 4.55
5742 5934 3.498774 AAGATGTGGACAAAGTCTGCT 57.501 42.857 0.00 0.00 32.47 4.24
5850 6042 0.249741 CCCAAACACCGACGAAGAGT 60.250 55.000 0.00 0.00 0.00 3.24
5880 6072 1.486310 CCATACTGAAGTAGGCTGCCA 59.514 52.381 22.65 3.92 33.52 4.92
6155 6349 9.627123 AAAAGTTTATATCCGAATTCATGGAGA 57.373 29.630 6.22 2.77 37.76 3.71
6172 6366 9.314321 CGGTACACATCTCAGATAAAAGTTTAT 57.686 33.333 0.00 0.00 36.14 1.40
6183 6377 2.888414 TGTTCACGGTACACATCTCAGA 59.112 45.455 0.00 0.00 0.00 3.27
6208 6402 1.571460 CAGTTTCGGTCAGTGCAGC 59.429 57.895 0.00 0.00 0.00 5.25
6214 6411 2.386661 AGCATACCAGTTTCGGTCAG 57.613 50.000 0.00 0.00 40.67 3.51
6225 6422 1.834896 ACATACCACCGAAGCATACCA 59.165 47.619 0.00 0.00 0.00 3.25
6306 6503 8.783660 ACTTCTCAGGTATATAGGATTCACAA 57.216 34.615 0.00 0.00 0.00 3.33
6320 6517 4.223953 AGTGGAGACAAACTTCTCAGGTA 58.776 43.478 2.73 0.00 46.06 3.08
6358 6555 4.883585 TGATGAGGTGGATAAGTTGAATGC 59.116 41.667 0.00 0.00 0.00 3.56
6413 6610 1.372997 CTCAGTCAACGACGTGGGG 60.373 63.158 0.00 0.00 37.67 4.96
6439 6636 6.204301 CACCTGGAATAGTGCTCTCATAAATG 59.796 42.308 0.00 0.00 0.00 2.32
6459 6656 0.543749 GGGAGAAGATCACCCACCTG 59.456 60.000 7.85 0.00 45.31 4.00
6566 6763 0.943673 CGTGACACCTGCAATGAACA 59.056 50.000 4.68 2.43 0.00 3.18
6588 6793 5.812286 TCTCTTTTTAATAGTTTCCCGCCT 58.188 37.500 0.00 0.00 0.00 5.52
6624 6829 9.847706 TGCGATTGCTAAATTTAGTTTTGATAA 57.152 25.926 22.94 9.96 43.34 1.75
6626 6831 8.810427 CATGCGATTGCTAAATTTAGTTTTGAT 58.190 29.630 22.94 11.81 43.34 2.57
6627 6832 7.201427 GCATGCGATTGCTAAATTTAGTTTTGA 60.201 33.333 22.94 8.28 43.34 2.69
6628 6833 6.896088 GCATGCGATTGCTAAATTTAGTTTTG 59.104 34.615 22.94 13.93 43.34 2.44
6648 6860 1.517694 CCAATTCAGTGGCGCATGC 60.518 57.895 10.83 7.91 41.71 4.06
6699 6911 2.811410 TGGCATTTTCAGGCTTCTGAT 58.189 42.857 0.00 0.00 45.83 2.90
6707 6919 4.173971 GCGCTTGGCATTTTCAGG 57.826 55.556 0.00 0.00 42.87 3.86
6753 6965 5.728471 TCTTGCAAATGGAAGTTTTGACAA 58.272 33.333 13.33 3.90 42.96 3.18
6765 6977 5.350633 TGTGTCTTCTTTTCTTGCAAATGG 58.649 37.500 0.00 0.00 0.00 3.16
6784 6996 8.594881 TTTGAAAACTAATTGTGTGTTTGTGT 57.405 26.923 0.00 0.00 34.63 3.72
6815 7027 7.311364 TCGGTATTTTTCTTAACATGCCTAC 57.689 36.000 0.00 0.00 27.65 3.18
6883 7095 5.163550 GGACTTTATTGGGTTATGTTCTGGC 60.164 44.000 0.00 0.00 0.00 4.85
6890 7104 6.833416 TCATCTTGGGACTTTATTGGGTTATG 59.167 38.462 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.