Multiple sequence alignment - TraesCS7B01G124200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G124200 chr7B 100.000 4718 0 0 1 4718 145530530 145525813 0.000000e+00 8713.0
1 TraesCS7B01G124200 chr7B 95.640 711 28 2 1 711 506554817 506555524 0.000000e+00 1138.0
2 TraesCS7B01G124200 chr7B 78.089 429 84 10 2315 2737 145710393 145709969 3.620000e-66 263.0
3 TraesCS7B01G124200 chr7B 97.222 36 1 0 1856 1891 145527037 145527002 1.420000e-05 62.1
4 TraesCS7B01G124200 chr7B 97.222 36 1 0 3494 3529 145528675 145528640 1.420000e-05 62.1
5 TraesCS7B01G124200 chr7D 95.881 2889 101 5 841 3720 179219879 179217000 0.000000e+00 4660.0
6 TraesCS7B01G124200 chr7D 73.609 845 182 31 2186 3015 179522028 179521210 2.150000e-73 287.0
7 TraesCS7B01G124200 chr7D 75.439 171 23 13 1732 1891 179217353 179217191 1.100000e-06 65.8
8 TraesCS7B01G124200 chr7D 75.439 171 23 14 3367 3529 179218982 179218823 1.100000e-06 65.8
9 TraesCS7B01G124200 chr1B 97.120 764 19 2 2 765 649434925 649435685 0.000000e+00 1286.0
10 TraesCS7B01G124200 chr1B 95.251 758 31 4 1 758 594019192 594019944 0.000000e+00 1195.0
11 TraesCS7B01G124200 chr1B 94.855 758 39 0 1 758 61444866 61444109 0.000000e+00 1184.0
12 TraesCS7B01G124200 chr1B 93.478 46 3 0 3961 4006 584763 584718 8.470000e-08 69.4
13 TraesCS7B01G124200 chr5B 97.094 757 20 1 2 758 567000159 566999405 0.000000e+00 1275.0
14 TraesCS7B01G124200 chr5B 74.164 329 55 17 2216 2523 247063229 247062910 4.990000e-20 110.0
15 TraesCS7B01G124200 chr5B 95.455 44 2 0 3961 4004 473080114 473080071 2.360000e-08 71.3
16 TraesCS7B01G124200 chr6B 95.778 758 30 2 1 758 169162824 169162069 0.000000e+00 1221.0
17 TraesCS7B01G124200 chr6B 95.664 761 31 2 1 761 558308440 558307682 0.000000e+00 1221.0
18 TraesCS7B01G124200 chr6B 92.032 753 56 2 6 758 149431283 149432031 0.000000e+00 1055.0
19 TraesCS7B01G124200 chr6B 89.037 675 59 13 4052 4718 120677405 120678072 0.000000e+00 822.0
20 TraesCS7B01G124200 chr2B 94.481 761 40 2 1 761 453826290 453827048 0.000000e+00 1171.0
21 TraesCS7B01G124200 chr2B 79.416 787 120 27 2188 2962 106453369 106452613 7.000000e-143 518.0
22 TraesCS7B01G124200 chr2B 82.292 288 44 6 1727 2009 106453824 106453539 4.720000e-60 243.0
23 TraesCS7B01G124200 chr2B 79.429 350 60 9 2618 2962 106714952 106714610 2.190000e-58 237.0
24 TraesCS7B01G124200 chr3B 92.836 670 39 5 4053 4718 810095793 810095129 0.000000e+00 963.0
25 TraesCS7B01G124200 chr4A 90.732 669 44 8 4053 4718 2770578 2769925 0.000000e+00 876.0
26 TraesCS7B01G124200 chr4A 90.741 54 5 0 3953 4006 5773169 5773222 6.550000e-09 73.1
27 TraesCS7B01G124200 chr3D 90.045 673 56 8 4050 4718 559911246 559911911 0.000000e+00 861.0
28 TraesCS7B01G124200 chr3D 88.546 681 63 11 4048 4718 464255648 464254973 0.000000e+00 811.0
29 TraesCS7B01G124200 chrUn 93.426 578 32 4 4144 4718 316540799 316540225 0.000000e+00 852.0
30 TraesCS7B01G124200 chrUn 92.561 578 37 4 4144 4718 243812935 243813509 0.000000e+00 824.0
31 TraesCS7B01G124200 chrUn 92.561 578 37 4 4144 4718 365136989 365137563 0.000000e+00 824.0
32 TraesCS7B01G124200 chrUn 92.561 578 37 4 4144 4718 366239766 366240340 0.000000e+00 824.0
33 TraesCS7B01G124200 chrUn 91.089 101 9 0 4051 4151 243812448 243812548 2.290000e-28 137.0
34 TraesCS7B01G124200 chrUn 91.089 101 9 0 4051 4151 365136502 365136602 2.290000e-28 137.0
35 TraesCS7B01G124200 chr5D 90.120 668 38 8 4052 4716 540230844 540231486 0.000000e+00 843.0
36 TraesCS7B01G124200 chr5D 76.293 232 33 12 2308 2523 224314552 224314777 2.320000e-18 104.0
37 TraesCS7B01G124200 chr5D 85.542 83 10 1 3961 4043 481127414 481127334 8.410000e-13 86.1
38 TraesCS7B01G124200 chr7A 87.316 678 51 15 4051 4718 203016303 203016955 0.000000e+00 743.0
39 TraesCS7B01G124200 chr5A 74.545 330 52 19 2216 2523 299060656 299060975 1.070000e-21 115.0
40 TraesCS7B01G124200 chr5A 90.909 44 4 0 3961 4004 77756253 77756210 5.100000e-05 60.2
41 TraesCS7B01G124200 chr3A 84.091 88 12 2 3954 4041 730877781 730877866 3.030000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G124200 chr7B 145525813 145530530 4717 True 2945.733333 8713 98.148 1 4718 3 chr7B.!!$R2 4717
1 TraesCS7B01G124200 chr7B 506554817 506555524 707 False 1138.000000 1138 95.640 1 711 1 chr7B.!!$F1 710
2 TraesCS7B01G124200 chr7D 179217000 179219879 2879 True 1597.200000 4660 82.253 841 3720 3 chr7D.!!$R2 2879
3 TraesCS7B01G124200 chr7D 179521210 179522028 818 True 287.000000 287 73.609 2186 3015 1 chr7D.!!$R1 829
4 TraesCS7B01G124200 chr1B 649434925 649435685 760 False 1286.000000 1286 97.120 2 765 1 chr1B.!!$F2 763
5 TraesCS7B01G124200 chr1B 594019192 594019944 752 False 1195.000000 1195 95.251 1 758 1 chr1B.!!$F1 757
6 TraesCS7B01G124200 chr1B 61444109 61444866 757 True 1184.000000 1184 94.855 1 758 1 chr1B.!!$R2 757
7 TraesCS7B01G124200 chr5B 566999405 567000159 754 True 1275.000000 1275 97.094 2 758 1 chr5B.!!$R3 756
8 TraesCS7B01G124200 chr6B 169162069 169162824 755 True 1221.000000 1221 95.778 1 758 1 chr6B.!!$R1 757
9 TraesCS7B01G124200 chr6B 558307682 558308440 758 True 1221.000000 1221 95.664 1 761 1 chr6B.!!$R2 760
10 TraesCS7B01G124200 chr6B 149431283 149432031 748 False 1055.000000 1055 92.032 6 758 1 chr6B.!!$F2 752
11 TraesCS7B01G124200 chr6B 120677405 120678072 667 False 822.000000 822 89.037 4052 4718 1 chr6B.!!$F1 666
12 TraesCS7B01G124200 chr2B 453826290 453827048 758 False 1171.000000 1171 94.481 1 761 1 chr2B.!!$F1 760
13 TraesCS7B01G124200 chr2B 106452613 106453824 1211 True 380.500000 518 80.854 1727 2962 2 chr2B.!!$R2 1235
14 TraesCS7B01G124200 chr3B 810095129 810095793 664 True 963.000000 963 92.836 4053 4718 1 chr3B.!!$R1 665
15 TraesCS7B01G124200 chr4A 2769925 2770578 653 True 876.000000 876 90.732 4053 4718 1 chr4A.!!$R1 665
16 TraesCS7B01G124200 chr3D 559911246 559911911 665 False 861.000000 861 90.045 4050 4718 1 chr3D.!!$F1 668
17 TraesCS7B01G124200 chr3D 464254973 464255648 675 True 811.000000 811 88.546 4048 4718 1 chr3D.!!$R1 670
18 TraesCS7B01G124200 chrUn 316540225 316540799 574 True 852.000000 852 93.426 4144 4718 1 chrUn.!!$R1 574
19 TraesCS7B01G124200 chrUn 366239766 366240340 574 False 824.000000 824 92.561 4144 4718 1 chrUn.!!$F1 574
20 TraesCS7B01G124200 chrUn 243812448 243813509 1061 False 480.500000 824 91.825 4051 4718 2 chrUn.!!$F2 667
21 TraesCS7B01G124200 chrUn 365136502 365137563 1061 False 480.500000 824 91.825 4051 4718 2 chrUn.!!$F3 667
22 TraesCS7B01G124200 chr5D 540230844 540231486 642 False 843.000000 843 90.120 4052 4716 1 chr5D.!!$F2 664
23 TraesCS7B01G124200 chr7A 203016303 203016955 652 False 743.000000 743 87.316 4051 4718 1 chr7A.!!$F1 667

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
843 844 0.038526 AACACGGCGTCCTGAGTTAG 60.039 55.0 10.85 0.0 0.00 2.34 F
1718 1725 0.326264 ATGCTGAAGGTCCACCAGTC 59.674 55.0 10.90 0.0 38.89 3.51 F
2640 2668 0.036294 TGAGCGACGAGGAGAAGAGA 60.036 55.0 0.00 0.0 0.00 3.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1821 1831 0.753262 ACCCGTACATCTGCAGATCC 59.247 55.0 26.44 15.42 31.21 3.36 R
2856 2899 0.811281 TCACGAGCATGACGATGAGT 59.189 50.0 16.99 0.00 34.70 3.41 R
3722 3768 0.029567 TAACCAAAAACGGCGCTGTG 59.970 50.0 25.11 12.59 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 6.019640 CCTTTAACAAACACAAAGATGCACTG 60.020 38.462 0.00 0.00 32.20 3.66
420 421 3.753434 CGCCTCCTGCTGACTCGT 61.753 66.667 0.00 0.00 38.05 4.18
522 523 1.066573 CAAGCAGACTGAGACGGGAAT 60.067 52.381 6.65 0.00 0.00 3.01
576 577 4.072088 CGTGCGCCGTCTGGTTTC 62.072 66.667 4.18 0.00 37.67 2.78
718 719 1.619827 ACAAATGTGGTGGCAATCTGG 59.380 47.619 0.00 0.00 0.00 3.86
724 725 0.403655 TGGTGGCAATCTGGTGCTTA 59.596 50.000 0.00 0.00 44.31 3.09
766 767 5.404466 TTTTGCAATTCACTTCCTATGGG 57.596 39.130 0.00 0.00 0.00 4.00
767 768 4.314522 TTGCAATTCACTTCCTATGGGA 57.685 40.909 0.00 0.00 40.36 4.37
768 769 4.524802 TGCAATTCACTTCCTATGGGAT 57.475 40.909 0.00 0.00 41.87 3.85
769 770 4.209538 TGCAATTCACTTCCTATGGGATG 58.790 43.478 9.20 9.20 41.87 3.51
770 771 3.571401 GCAATTCACTTCCTATGGGATGG 59.429 47.826 14.44 6.52 41.87 3.51
771 772 3.515602 ATTCACTTCCTATGGGATGGC 57.484 47.619 14.44 0.00 41.87 4.40
772 773 1.140312 TCACTTCCTATGGGATGGCC 58.860 55.000 14.44 0.00 41.87 5.36
773 774 1.143813 CACTTCCTATGGGATGGCCT 58.856 55.000 14.44 0.00 41.87 5.19
774 775 2.090210 TCACTTCCTATGGGATGGCCTA 60.090 50.000 14.44 0.00 41.87 3.93
775 776 2.304180 CACTTCCTATGGGATGGCCTAG 59.696 54.545 14.44 3.66 41.87 3.02
776 777 2.182312 ACTTCCTATGGGATGGCCTAGA 59.818 50.000 14.44 0.00 41.87 2.43
777 778 3.251484 CTTCCTATGGGATGGCCTAGAA 58.749 50.000 3.32 0.00 41.87 2.10
778 779 2.621070 TCCTATGGGATGGCCTAGAAC 58.379 52.381 3.32 0.00 36.57 3.01
779 780 2.090210 TCCTATGGGATGGCCTAGAACA 60.090 50.000 3.32 0.00 36.57 3.18
780 781 2.304180 CCTATGGGATGGCCTAGAACAG 59.696 54.545 3.32 0.00 33.58 3.16
781 782 2.196742 ATGGGATGGCCTAGAACAGA 57.803 50.000 3.32 0.00 0.00 3.41
782 783 2.196742 TGGGATGGCCTAGAACAGAT 57.803 50.000 3.32 0.00 0.00 2.90
783 784 2.492025 TGGGATGGCCTAGAACAGATT 58.508 47.619 3.32 0.00 0.00 2.40
784 785 2.852449 TGGGATGGCCTAGAACAGATTT 59.148 45.455 3.32 0.00 0.00 2.17
785 786 4.044308 TGGGATGGCCTAGAACAGATTTA 58.956 43.478 3.32 0.00 0.00 1.40
786 787 4.476846 TGGGATGGCCTAGAACAGATTTAA 59.523 41.667 3.32 0.00 0.00 1.52
787 788 5.134339 TGGGATGGCCTAGAACAGATTTAAT 59.866 40.000 3.32 0.00 0.00 1.40
788 789 6.071320 GGGATGGCCTAGAACAGATTTAATT 58.929 40.000 3.32 0.00 0.00 1.40
789 790 7.147213 TGGGATGGCCTAGAACAGATTTAATTA 60.147 37.037 3.32 0.00 0.00 1.40
790 791 7.890655 GGGATGGCCTAGAACAGATTTAATTAT 59.109 37.037 3.32 0.00 0.00 1.28
791 792 8.734386 GGATGGCCTAGAACAGATTTAATTATG 58.266 37.037 3.32 0.00 0.00 1.90
792 793 9.289782 GATGGCCTAGAACAGATTTAATTATGT 57.710 33.333 3.32 0.00 0.00 2.29
793 794 9.646522 ATGGCCTAGAACAGATTTAATTATGTT 57.353 29.630 3.32 9.46 38.53 2.71
794 795 8.902806 TGGCCTAGAACAGATTTAATTATGTTG 58.097 33.333 13.42 3.01 36.08 3.33
795 796 8.352942 GGCCTAGAACAGATTTAATTATGTTGG 58.647 37.037 13.42 10.22 36.08 3.77
796 797 7.862873 GCCTAGAACAGATTTAATTATGTTGGC 59.137 37.037 13.42 14.76 36.04 4.52
797 798 8.352942 CCTAGAACAGATTTAATTATGTTGGCC 58.647 37.037 13.42 0.00 36.08 5.36
798 799 6.795399 AGAACAGATTTAATTATGTTGGCCG 58.205 36.000 13.42 0.00 36.08 6.13
799 800 4.932146 ACAGATTTAATTATGTTGGCCGC 58.068 39.130 0.00 0.00 0.00 6.53
800 801 3.974401 CAGATTTAATTATGTTGGCCGCG 59.026 43.478 0.00 0.00 0.00 6.46
801 802 2.196295 TTTAATTATGTTGGCCGCGC 57.804 45.000 0.00 0.00 0.00 6.86
802 803 1.095600 TTAATTATGTTGGCCGCGCA 58.904 45.000 8.75 0.00 0.00 6.09
803 804 1.095600 TAATTATGTTGGCCGCGCAA 58.904 45.000 8.75 0.00 0.00 4.85
804 805 0.179140 AATTATGTTGGCCGCGCAAG 60.179 50.000 8.75 0.00 43.44 4.01
805 806 1.029408 ATTATGTTGGCCGCGCAAGA 61.029 50.000 8.75 0.00 43.02 3.02
806 807 1.643868 TTATGTTGGCCGCGCAAGAG 61.644 55.000 8.75 0.00 43.02 2.85
814 815 4.697756 CGCGCAAGAGGGGTGGAA 62.698 66.667 8.75 0.00 43.02 3.53
815 816 3.056328 GCGCAAGAGGGGTGGAAC 61.056 66.667 0.30 0.00 43.02 3.62
816 817 2.742372 CGCAAGAGGGGTGGAACG 60.742 66.667 0.00 0.00 37.28 3.95
817 818 2.430367 GCAAGAGGGGTGGAACGT 59.570 61.111 0.00 0.00 38.12 3.99
818 819 1.228154 GCAAGAGGGGTGGAACGTT 60.228 57.895 0.00 0.00 38.12 3.99
819 820 1.235281 GCAAGAGGGGTGGAACGTTC 61.235 60.000 20.14 20.14 38.12 3.95
820 821 0.107831 CAAGAGGGGTGGAACGTTCA 59.892 55.000 28.24 12.75 38.12 3.18
821 822 0.841289 AAGAGGGGTGGAACGTTCAA 59.159 50.000 28.24 16.48 38.12 2.69
822 823 1.064825 AGAGGGGTGGAACGTTCAAT 58.935 50.000 28.24 3.22 38.12 2.57
823 824 1.165270 GAGGGGTGGAACGTTCAATG 58.835 55.000 28.24 0.00 38.12 2.82
824 825 0.768622 AGGGGTGGAACGTTCAATGA 59.231 50.000 28.24 7.47 38.12 2.57
825 826 1.144093 AGGGGTGGAACGTTCAATGAA 59.856 47.619 28.24 6.69 38.12 2.57
826 827 1.268625 GGGGTGGAACGTTCAATGAAC 59.731 52.381 28.24 15.62 38.12 3.18
827 828 1.950909 GGGTGGAACGTTCAATGAACA 59.049 47.619 28.24 13.78 42.05 3.18
828 829 2.287368 GGGTGGAACGTTCAATGAACAC 60.287 50.000 28.24 22.90 42.05 3.32
829 830 2.601266 GGTGGAACGTTCAATGAACACG 60.601 50.000 28.24 15.19 42.05 4.49
830 831 1.600013 TGGAACGTTCAATGAACACGG 59.400 47.619 28.24 11.53 42.05 4.94
831 832 1.662026 GGAACGTTCAATGAACACGGC 60.662 52.381 28.24 10.76 42.05 5.68
832 833 0.041663 AACGTTCAATGAACACGGCG 60.042 50.000 23.72 13.02 42.05 6.46
833 834 1.155424 ACGTTCAATGAACACGGCGT 61.155 50.000 23.72 6.77 42.05 5.68
834 835 0.450482 CGTTCAATGAACACGGCGTC 60.450 55.000 23.72 0.00 42.05 5.19
835 836 0.110373 GTTCAATGAACACGGCGTCC 60.110 55.000 20.08 2.74 41.62 4.79
836 837 0.250124 TTCAATGAACACGGCGTCCT 60.250 50.000 10.85 0.00 0.00 3.85
837 838 0.948623 TCAATGAACACGGCGTCCTG 60.949 55.000 10.85 0.94 0.00 3.86
838 839 0.948623 CAATGAACACGGCGTCCTGA 60.949 55.000 10.85 0.00 0.00 3.86
839 840 0.670546 AATGAACACGGCGTCCTGAG 60.671 55.000 10.85 0.00 0.00 3.35
843 844 0.038526 AACACGGCGTCCTGAGTTAG 60.039 55.000 10.85 0.00 0.00 2.34
897 898 6.311445 CGTAGCTCAAGGGTTTATATATGCAG 59.689 42.308 0.00 0.00 0.00 4.41
926 927 2.271821 CACCCATCCATCGGCACA 59.728 61.111 0.00 0.00 0.00 4.57
949 950 1.600636 CTTCCTCCCACGCTTGCAA 60.601 57.895 0.00 0.00 0.00 4.08
980 981 6.922957 CACCAAAGATAACAGAGATAGAGCTC 59.077 42.308 5.27 5.27 35.11 4.09
984 985 6.882610 AGATAACAGAGATAGAGCTCACTG 57.117 41.667 17.77 17.20 39.07 3.66
985 986 3.799281 AACAGAGATAGAGCTCACTGC 57.201 47.619 17.77 2.04 37.36 4.40
987 988 1.340889 CAGAGATAGAGCTCACTGCCC 59.659 57.143 17.77 0.18 44.23 5.36
1006 1007 0.742990 CGTGGCTAGGAAAATGGCGA 60.743 55.000 0.00 0.00 0.00 5.54
1095 1102 1.079127 CCACCTGCGGAAGTACCTG 60.079 63.158 0.00 0.00 36.31 4.00
1176 1183 4.459089 GTCTGGCAGGAGTCCGGC 62.459 72.222 24.49 24.49 43.73 6.13
1551 1558 2.883253 GTGCGCGAGAAGGAGAGC 60.883 66.667 12.10 0.00 0.00 4.09
1554 1561 4.560856 CGCGAGAAGGAGAGCCCG 62.561 72.222 0.00 0.00 40.87 6.13
1632 1639 3.122250 GACCGGCATCTCGTACGCT 62.122 63.158 11.24 0.00 0.00 5.07
1638 1645 2.827190 ATCTCGTACGCTGCCGGA 60.827 61.111 11.24 2.23 39.22 5.14
1669 1676 2.335712 GGTGGCTTCCTTGGCGAAG 61.336 63.158 0.74 0.74 41.88 3.79
1718 1725 0.326264 ATGCTGAAGGTCCACCAGTC 59.674 55.000 10.90 0.00 38.89 3.51
1821 1831 1.586564 GCTGCAGAGGTACTACGCG 60.587 63.158 20.43 3.53 41.55 6.01
1824 1834 0.750546 TGCAGAGGTACTACGCGGAT 60.751 55.000 12.47 0.00 41.55 4.18
1825 1835 0.040246 GCAGAGGTACTACGCGGATC 60.040 60.000 12.47 0.00 41.55 3.36
2059 2072 2.633657 CGTCACACTGGCTGCAAC 59.366 61.111 0.50 0.00 0.00 4.17
2088 2101 1.983224 CCACCAGAACCAGACCGAT 59.017 57.895 0.00 0.00 0.00 4.18
2214 2239 3.129871 CGAGAAGGCCAAATCTCTGATC 58.870 50.000 22.94 5.81 39.92 2.92
2259 2284 1.376609 CCATCACTTACCAAGCGGGC 61.377 60.000 0.00 0.00 42.05 6.13
2388 2413 2.610727 GGCGTTCTTCTACTGCAACTCT 60.611 50.000 0.00 0.00 0.00 3.24
2547 2572 0.817654 TGAGCACCTCCATCTACGTG 59.182 55.000 0.00 0.00 0.00 4.49
2550 2575 0.179108 GCACCTCCATCTACGTGGTC 60.179 60.000 0.00 0.00 40.27 4.02
2626 2651 1.444553 GACAACGAGGACCTGAGCG 60.445 63.158 0.00 0.00 0.00 5.03
2640 2668 0.036294 TGAGCGACGAGGAGAAGAGA 60.036 55.000 0.00 0.00 0.00 3.10
2793 2836 0.886043 TCCTCGAAGACCACGACGAA 60.886 55.000 0.00 0.00 35.88 3.85
3000 3043 1.592669 GCTGCGCACGTCCATCTAT 60.593 57.895 5.66 0.00 0.00 1.98
3051 3094 0.247460 TCATAGTCGTGCAGCTGCTT 59.753 50.000 36.61 19.69 42.66 3.91
3111 3154 0.899019 GAGAAAACGGCTCCTCCTCT 59.101 55.000 0.00 0.00 0.00 3.69
3178 3224 3.691342 CCTCCAGGCCACGACGAA 61.691 66.667 5.01 0.00 0.00 3.85
3222 3268 4.070552 ACGGAGGCGACTTCCAGC 62.071 66.667 0.00 0.00 44.43 4.85
3249 3295 2.176273 GTACCTGATGCTGCTGGCG 61.176 63.158 0.00 0.00 45.43 5.69
3414 3460 4.922026 GTGGCGTCGGTGGTGGTT 62.922 66.667 0.00 0.00 0.00 3.67
3568 3614 2.101575 GGTACGTCATCGCGCTGA 59.898 61.111 8.85 8.85 41.18 4.26
3609 3655 2.512515 GGCATCCACCTCGTGCTC 60.513 66.667 0.00 0.00 38.83 4.26
3618 3664 1.521010 CCTCGTGCTCTGGATGCTG 60.521 63.158 0.00 0.00 0.00 4.41
3652 3698 1.379977 CGAGGGAGAGTGGCCAGTA 60.380 63.158 14.64 0.00 0.00 2.74
3663 3709 2.124736 GCCAGTATCCCGCAGCAA 60.125 61.111 0.00 0.00 0.00 3.91
3687 3733 2.268076 GCCCGCTGAGCCAAAAGAA 61.268 57.895 0.00 0.00 0.00 2.52
3702 3748 5.215160 CCAAAAGAAACAAGGAGATGTTCG 58.785 41.667 0.00 0.00 42.49 3.95
3714 3760 3.310860 ATGTTCGTCCTCCCCGTGC 62.311 63.158 0.00 0.00 0.00 5.34
3720 3766 3.706373 TCCTCCCCGTGCTGAAGC 61.706 66.667 0.00 0.00 42.50 3.86
3721 3767 3.710722 CCTCCCCGTGCTGAAGCT 61.711 66.667 3.61 0.00 42.66 3.74
3722 3768 2.125350 CTCCCCGTGCTGAAGCTC 60.125 66.667 3.61 0.00 42.66 4.09
3723 3769 2.922503 TCCCCGTGCTGAAGCTCA 60.923 61.111 3.61 0.00 42.66 4.26
3724 3770 2.743928 CCCCGTGCTGAAGCTCAC 60.744 66.667 3.61 0.00 42.66 3.51
3725 3771 2.031012 CCCGTGCTGAAGCTCACA 59.969 61.111 3.61 0.00 42.66 3.58
3726 3772 2.031516 CCCGTGCTGAAGCTCACAG 61.032 63.158 14.12 14.12 42.66 3.66
3736 3782 2.331451 GCTCACAGCGCCGTTTTT 59.669 55.556 2.29 0.00 0.00 1.94
3737 3783 2.010817 GCTCACAGCGCCGTTTTTG 61.011 57.895 2.29 0.00 0.00 2.44
3738 3784 1.370414 CTCACAGCGCCGTTTTTGG 60.370 57.895 2.29 0.00 0.00 3.28
3739 3785 2.058829 CTCACAGCGCCGTTTTTGGT 62.059 55.000 2.29 0.00 0.00 3.67
3740 3786 1.226831 CACAGCGCCGTTTTTGGTT 60.227 52.632 2.29 0.00 0.00 3.67
3741 3787 0.029567 CACAGCGCCGTTTTTGGTTA 59.970 50.000 2.29 0.00 0.00 2.85
3742 3788 0.309612 ACAGCGCCGTTTTTGGTTAG 59.690 50.000 2.29 0.00 0.00 2.34
3743 3789 1.001745 CAGCGCCGTTTTTGGTTAGC 61.002 55.000 2.29 0.00 0.00 3.09
3744 3790 1.170290 AGCGCCGTTTTTGGTTAGCT 61.170 50.000 2.29 0.00 33.71 3.32
3745 3791 1.001745 GCGCCGTTTTTGGTTAGCTG 61.002 55.000 0.00 0.00 0.00 4.24
3746 3792 0.309612 CGCCGTTTTTGGTTAGCTGT 59.690 50.000 0.00 0.00 0.00 4.40
3747 3793 1.268845 CGCCGTTTTTGGTTAGCTGTT 60.269 47.619 0.00 0.00 0.00 3.16
3748 3794 2.124122 GCCGTTTTTGGTTAGCTGTTG 58.876 47.619 0.00 0.00 0.00 3.33
3749 3795 2.223618 GCCGTTTTTGGTTAGCTGTTGA 60.224 45.455 0.00 0.00 0.00 3.18
3750 3796 3.735514 GCCGTTTTTGGTTAGCTGTTGAA 60.736 43.478 0.00 0.00 0.00 2.69
3751 3797 4.616953 CCGTTTTTGGTTAGCTGTTGAAT 58.383 39.130 0.00 0.00 0.00 2.57
3752 3798 5.047188 CCGTTTTTGGTTAGCTGTTGAATT 58.953 37.500 0.00 0.00 0.00 2.17
3753 3799 5.051106 CCGTTTTTGGTTAGCTGTTGAATTG 60.051 40.000 0.00 0.00 0.00 2.32
3754 3800 5.556194 CGTTTTTGGTTAGCTGTTGAATTGC 60.556 40.000 0.00 0.00 0.00 3.56
3755 3801 4.935352 TTTGGTTAGCTGTTGAATTGCT 57.065 36.364 0.00 0.00 40.43 3.91
3756 3802 3.921119 TGGTTAGCTGTTGAATTGCTG 57.079 42.857 0.00 0.00 37.62 4.41
3757 3803 3.485394 TGGTTAGCTGTTGAATTGCTGA 58.515 40.909 0.00 0.00 37.62 4.26
3758 3804 4.081406 TGGTTAGCTGTTGAATTGCTGAT 58.919 39.130 0.00 0.00 37.62 2.90
3759 3805 4.523943 TGGTTAGCTGTTGAATTGCTGATT 59.476 37.500 0.00 0.00 37.62 2.57
3760 3806 4.860907 GGTTAGCTGTTGAATTGCTGATTG 59.139 41.667 0.00 0.00 37.62 2.67
3761 3807 3.587797 AGCTGTTGAATTGCTGATTGG 57.412 42.857 0.00 0.00 35.54 3.16
3762 3808 1.997606 GCTGTTGAATTGCTGATTGGC 59.002 47.619 0.00 0.00 0.00 4.52
3763 3809 2.610976 GCTGTTGAATTGCTGATTGGCA 60.611 45.455 0.00 0.00 40.74 4.92
3764 3810 3.857052 CTGTTGAATTGCTGATTGGCAT 58.143 40.909 0.00 0.00 42.09 4.40
3765 3811 3.852286 TGTTGAATTGCTGATTGGCATC 58.148 40.909 0.00 0.00 42.09 3.91
3766 3812 3.192466 GTTGAATTGCTGATTGGCATCC 58.808 45.455 0.00 0.00 42.09 3.51
3767 3813 1.758280 TGAATTGCTGATTGGCATCCC 59.242 47.619 0.00 0.00 42.09 3.85
3768 3814 0.748450 AATTGCTGATTGGCATCCCG 59.252 50.000 0.00 0.00 42.09 5.14
3769 3815 1.741327 ATTGCTGATTGGCATCCCGC 61.741 55.000 0.00 0.00 42.09 6.13
3779 3825 3.036577 CATCCCGCCATGCATGTC 58.963 61.111 24.58 12.13 0.00 3.06
3780 3826 2.203394 ATCCCGCCATGCATGTCC 60.203 61.111 24.58 14.13 0.00 4.02
3781 3827 2.760378 ATCCCGCCATGCATGTCCT 61.760 57.895 24.58 1.21 0.00 3.85
3782 3828 2.288642 ATCCCGCCATGCATGTCCTT 62.289 55.000 24.58 2.43 0.00 3.36
3783 3829 2.484062 CCCGCCATGCATGTCCTTC 61.484 63.158 24.58 7.78 0.00 3.46
3784 3830 1.750018 CCGCCATGCATGTCCTTCA 60.750 57.895 24.58 0.00 0.00 3.02
3785 3831 1.314534 CCGCCATGCATGTCCTTCAA 61.315 55.000 24.58 0.00 0.00 2.69
3786 3832 0.527113 CGCCATGCATGTCCTTCAAA 59.473 50.000 24.58 0.00 0.00 2.69
3787 3833 1.135527 CGCCATGCATGTCCTTCAAAT 59.864 47.619 24.58 0.00 0.00 2.32
3788 3834 2.546778 GCCATGCATGTCCTTCAAATG 58.453 47.619 24.58 6.89 0.00 2.32
3789 3835 2.740580 GCCATGCATGTCCTTCAAATGG 60.741 50.000 24.58 8.03 38.00 3.16
3790 3836 2.498481 CCATGCATGTCCTTCAAATGGT 59.502 45.455 24.58 0.00 34.11 3.55
3791 3837 3.055675 CCATGCATGTCCTTCAAATGGTT 60.056 43.478 24.58 0.00 34.11 3.67
3792 3838 4.160065 CCATGCATGTCCTTCAAATGGTTA 59.840 41.667 24.58 0.00 34.11 2.85
3793 3839 5.163385 CCATGCATGTCCTTCAAATGGTTAT 60.163 40.000 24.58 0.00 34.11 1.89
3794 3840 5.999205 TGCATGTCCTTCAAATGGTTATT 57.001 34.783 0.00 0.00 0.00 1.40
3795 3841 6.357579 TGCATGTCCTTCAAATGGTTATTT 57.642 33.333 0.00 0.00 36.97 1.40
3796 3842 6.397272 TGCATGTCCTTCAAATGGTTATTTC 58.603 36.000 0.00 0.00 34.34 2.17
3797 3843 5.516339 GCATGTCCTTCAAATGGTTATTTCG 59.484 40.000 0.00 0.00 34.34 3.46
3798 3844 5.637006 TGTCCTTCAAATGGTTATTTCGG 57.363 39.130 0.00 0.00 34.34 4.30
3799 3845 4.461081 TGTCCTTCAAATGGTTATTTCGGG 59.539 41.667 0.00 0.00 34.34 5.14
3800 3846 4.703093 GTCCTTCAAATGGTTATTTCGGGA 59.297 41.667 0.00 0.00 34.34 5.14
3801 3847 5.184287 GTCCTTCAAATGGTTATTTCGGGAA 59.816 40.000 0.00 0.00 34.34 3.97
3802 3848 5.417580 TCCTTCAAATGGTTATTTCGGGAAG 59.582 40.000 0.00 0.00 35.59 3.46
3803 3849 5.417580 CCTTCAAATGGTTATTTCGGGAAGA 59.582 40.000 0.00 0.00 36.70 2.87
3804 3850 6.071616 CCTTCAAATGGTTATTTCGGGAAGAA 60.072 38.462 0.00 0.00 36.70 2.52
3805 3851 6.262193 TCAAATGGTTATTTCGGGAAGAAC 57.738 37.500 0.00 0.00 38.83 3.01
3806 3852 5.770663 TCAAATGGTTATTTCGGGAAGAACA 59.229 36.000 8.64 0.00 40.39 3.18
3807 3853 5.897377 AATGGTTATTTCGGGAAGAACAG 57.103 39.130 8.64 0.00 40.39 3.16
3808 3854 4.627284 TGGTTATTTCGGGAAGAACAGA 57.373 40.909 8.64 0.00 40.39 3.41
3809 3855 5.174037 TGGTTATTTCGGGAAGAACAGAT 57.826 39.130 8.64 0.00 40.39 2.90
3810 3856 4.941263 TGGTTATTTCGGGAAGAACAGATG 59.059 41.667 8.64 0.00 40.39 2.90
3811 3857 4.201920 GGTTATTTCGGGAAGAACAGATGC 60.202 45.833 8.64 0.00 40.39 3.91
3812 3858 2.559698 TTTCGGGAAGAACAGATGCA 57.440 45.000 0.00 0.00 38.83 3.96
3813 3859 1.808411 TTCGGGAAGAACAGATGCAC 58.192 50.000 0.00 0.00 33.14 4.57
3814 3860 0.389817 TCGGGAAGAACAGATGCACG 60.390 55.000 0.00 0.00 0.00 5.34
3815 3861 1.361668 CGGGAAGAACAGATGCACGG 61.362 60.000 0.00 0.00 0.00 4.94
3816 3862 0.036388 GGGAAGAACAGATGCACGGA 60.036 55.000 0.00 0.00 0.00 4.69
3817 3863 1.407437 GGGAAGAACAGATGCACGGAT 60.407 52.381 0.00 0.00 0.00 4.18
3818 3864 2.158957 GGGAAGAACAGATGCACGGATA 60.159 50.000 0.00 0.00 0.00 2.59
3819 3865 2.866762 GGAAGAACAGATGCACGGATAC 59.133 50.000 0.00 0.00 0.00 2.24
3820 3866 3.430929 GGAAGAACAGATGCACGGATACT 60.431 47.826 0.00 0.00 0.00 2.12
3821 3867 4.202121 GGAAGAACAGATGCACGGATACTA 60.202 45.833 0.00 0.00 0.00 1.82
3822 3868 5.509840 GGAAGAACAGATGCACGGATACTAT 60.510 44.000 0.00 0.00 0.00 2.12
3823 3869 4.876125 AGAACAGATGCACGGATACTATG 58.124 43.478 0.00 0.00 0.00 2.23
3824 3870 4.584743 AGAACAGATGCACGGATACTATGA 59.415 41.667 0.00 0.00 0.00 2.15
3825 3871 4.937201 ACAGATGCACGGATACTATGAA 57.063 40.909 0.00 0.00 0.00 2.57
3826 3872 5.474578 ACAGATGCACGGATACTATGAAT 57.525 39.130 0.00 0.00 0.00 2.57
3827 3873 5.473931 ACAGATGCACGGATACTATGAATC 58.526 41.667 0.00 0.00 36.22 2.52
3828 3874 5.244851 ACAGATGCACGGATACTATGAATCT 59.755 40.000 0.00 0.00 43.20 2.40
3829 3875 5.718146 AGATGCACGGATACTATGAATCTG 58.282 41.667 0.00 0.00 41.70 2.90
3830 3876 4.937201 TGCACGGATACTATGAATCTGT 57.063 40.909 0.00 0.00 42.41 3.41
3831 3877 6.434340 AGATGCACGGATACTATGAATCTGTA 59.566 38.462 0.00 0.00 41.70 2.74
3832 3878 6.013842 TGCACGGATACTATGAATCTGTAG 57.986 41.667 0.00 0.00 40.24 2.74
3833 3879 5.768164 TGCACGGATACTATGAATCTGTAGA 59.232 40.000 0.00 0.00 40.24 2.59
3834 3880 6.434340 TGCACGGATACTATGAATCTGTAGAT 59.566 38.462 0.00 0.00 40.24 1.98
3835 3881 6.749578 GCACGGATACTATGAATCTGTAGATG 59.250 42.308 0.00 0.00 40.24 2.90
3836 3882 7.362142 GCACGGATACTATGAATCTGTAGATGA 60.362 40.741 0.00 0.00 40.24 2.92
3837 3883 7.965655 CACGGATACTATGAATCTGTAGATGAC 59.034 40.741 0.00 0.00 40.24 3.06
3838 3884 7.665974 ACGGATACTATGAATCTGTAGATGACA 59.334 37.037 0.00 0.66 40.39 3.58
3839 3885 7.965655 CGGATACTATGAATCTGTAGATGACAC 59.034 40.741 0.00 0.00 34.49 3.67
3840 3886 7.965655 GGATACTATGAATCTGTAGATGACACG 59.034 40.741 0.00 0.00 34.49 4.49
3841 3887 6.701145 ACTATGAATCTGTAGATGACACGT 57.299 37.500 0.00 0.00 34.49 4.49
3842 3888 7.101652 ACTATGAATCTGTAGATGACACGTT 57.898 36.000 0.00 0.00 34.49 3.99
3843 3889 7.197017 ACTATGAATCTGTAGATGACACGTTC 58.803 38.462 0.00 0.00 34.49 3.95
3844 3890 5.385509 TGAATCTGTAGATGACACGTTCA 57.614 39.130 0.00 3.49 35.51 3.18
3845 3891 5.402398 TGAATCTGTAGATGACACGTTCAG 58.598 41.667 0.00 0.00 37.77 3.02
3846 3892 5.048013 TGAATCTGTAGATGACACGTTCAGT 60.048 40.000 0.00 0.00 37.77 3.41
3847 3893 4.848562 TCTGTAGATGACACGTTCAGTT 57.151 40.909 6.59 1.43 37.77 3.16
3848 3894 5.952526 TCTGTAGATGACACGTTCAGTTA 57.047 39.130 6.59 0.00 37.77 2.24
3849 3895 6.321848 TCTGTAGATGACACGTTCAGTTAA 57.678 37.500 6.59 0.00 37.77 2.01
3850 3896 6.147581 TCTGTAGATGACACGTTCAGTTAAC 58.852 40.000 0.00 0.00 37.77 2.01
3851 3897 6.016527 TCTGTAGATGACACGTTCAGTTAACT 60.017 38.462 1.12 1.12 37.77 2.24
3852 3898 5.918576 TGTAGATGACACGTTCAGTTAACTG 59.081 40.000 26.60 26.60 37.77 3.16
3853 3899 6.238814 TGTAGATGACACGTTCAGTTAACTGA 60.239 38.462 30.07 30.07 41.29 3.41
3854 3900 7.682501 TGTAGATGACACGTTCAGTTAACTGAA 60.683 37.037 36.05 36.05 45.31 3.02
3869 3915 8.761497 CAGTTAACTGAAACGAAGAAGATAACA 58.239 33.333 28.17 0.00 46.59 2.41
3870 3916 8.762426 AGTTAACTGAAACGAAGAAGATAACAC 58.238 33.333 7.48 0.00 34.46 3.32
3871 3917 5.824243 ACTGAAACGAAGAAGATAACACG 57.176 39.130 0.00 0.00 0.00 4.49
3872 3918 5.287226 ACTGAAACGAAGAAGATAACACGT 58.713 37.500 0.00 0.00 35.56 4.49
3873 3919 5.751990 ACTGAAACGAAGAAGATAACACGTT 59.248 36.000 0.00 0.00 43.76 3.99
3874 3920 6.074463 ACTGAAACGAAGAAGATAACACGTTC 60.074 38.462 0.00 0.00 41.72 3.95
3875 3921 5.749588 TGAAACGAAGAAGATAACACGTTCA 59.250 36.000 0.00 0.00 41.72 3.18
3876 3922 5.824243 AACGAAGAAGATAACACGTTCAG 57.176 39.130 0.00 0.00 39.15 3.02
3877 3923 4.868067 ACGAAGAAGATAACACGTTCAGT 58.132 39.130 0.00 0.00 0.00 3.41
3878 3924 5.287226 ACGAAGAAGATAACACGTTCAGTT 58.713 37.500 0.00 0.00 0.00 3.16
3879 3925 6.441274 ACGAAGAAGATAACACGTTCAGTTA 58.559 36.000 0.00 0.10 36.06 2.24
3880 3926 6.919662 ACGAAGAAGATAACACGTTCAGTTAA 59.080 34.615 1.62 0.00 35.33 2.01
3881 3927 7.096312 ACGAAGAAGATAACACGTTCAGTTAAC 60.096 37.037 0.00 0.00 35.33 2.01
3882 3928 7.114529 CGAAGAAGATAACACGTTCAGTTAACT 59.885 37.037 1.12 1.12 36.51 2.24
3883 3929 7.639162 AGAAGATAACACGTTCAGTTAACTG 57.361 36.000 26.60 26.60 45.08 3.16
3899 3945 8.427181 CAGTTAACTGAAACGAAGAAATGATG 57.573 34.615 28.17 0.00 46.59 3.07
3900 3946 7.059945 CAGTTAACTGAAACGAAGAAATGATGC 59.940 37.037 28.17 0.00 46.59 3.91
3901 3947 5.437289 AACTGAAACGAAGAAATGATGCA 57.563 34.783 0.00 0.00 0.00 3.96
3902 3948 5.437289 ACTGAAACGAAGAAATGATGCAA 57.563 34.783 0.00 0.00 0.00 4.08
3903 3949 5.455392 ACTGAAACGAAGAAATGATGCAAG 58.545 37.500 0.00 0.00 0.00 4.01
3904 3950 5.239306 ACTGAAACGAAGAAATGATGCAAGA 59.761 36.000 0.00 0.00 0.00 3.02
3905 3951 6.070897 TGAAACGAAGAAATGATGCAAGAA 57.929 33.333 0.00 0.00 0.00 2.52
3906 3952 5.914635 TGAAACGAAGAAATGATGCAAGAAC 59.085 36.000 0.00 0.00 0.00 3.01
3907 3953 4.070581 ACGAAGAAATGATGCAAGAACG 57.929 40.909 0.00 0.00 0.00 3.95
3908 3954 3.745975 ACGAAGAAATGATGCAAGAACGA 59.254 39.130 0.00 0.00 0.00 3.85
3909 3955 4.084507 CGAAGAAATGATGCAAGAACGAC 58.915 43.478 0.00 0.00 0.00 4.34
3910 3956 4.377328 CGAAGAAATGATGCAAGAACGACA 60.377 41.667 0.00 0.00 0.00 4.35
3911 3957 5.633830 AAGAAATGATGCAAGAACGACAT 57.366 34.783 0.00 0.00 0.00 3.06
3912 3958 4.978186 AGAAATGATGCAAGAACGACATG 58.022 39.130 0.00 0.00 0.00 3.21
3913 3959 4.696877 AGAAATGATGCAAGAACGACATGA 59.303 37.500 0.00 0.00 0.00 3.07
3914 3960 5.181811 AGAAATGATGCAAGAACGACATGAA 59.818 36.000 0.00 0.00 0.00 2.57
3915 3961 4.611310 ATGATGCAAGAACGACATGAAG 57.389 40.909 0.00 0.00 0.00 3.02
3916 3962 2.743664 TGATGCAAGAACGACATGAAGG 59.256 45.455 0.00 0.00 0.00 3.46
3917 3963 1.522668 TGCAAGAACGACATGAAGGG 58.477 50.000 0.00 0.00 0.00 3.95
3918 3964 0.804989 GCAAGAACGACATGAAGGGG 59.195 55.000 0.00 0.00 0.00 4.79
3919 3965 1.882352 GCAAGAACGACATGAAGGGGT 60.882 52.381 0.00 0.00 0.00 4.95
3920 3966 2.614481 GCAAGAACGACATGAAGGGGTA 60.614 50.000 0.00 0.00 0.00 3.69
3921 3967 3.000727 CAAGAACGACATGAAGGGGTAC 58.999 50.000 0.00 0.00 0.00 3.34
3922 3968 1.203994 AGAACGACATGAAGGGGTACG 59.796 52.381 0.00 0.00 0.00 3.67
3923 3969 0.390735 AACGACATGAAGGGGTACGC 60.391 55.000 0.00 0.29 43.76 4.42
3942 3988 3.313750 CGCAGCTTGTATCCTCGC 58.686 61.111 0.00 0.00 0.00 5.03
3943 3989 2.580470 CGCAGCTTGTATCCTCGCG 61.580 63.158 0.00 0.00 34.89 5.87
3944 3990 1.226974 GCAGCTTGTATCCTCGCGA 60.227 57.895 9.26 9.26 0.00 5.87
3945 3991 1.483424 GCAGCTTGTATCCTCGCGAC 61.483 60.000 3.71 0.00 0.00 5.19
3946 3992 0.872021 CAGCTTGTATCCTCGCGACC 60.872 60.000 3.71 0.00 0.00 4.79
3947 3993 1.038130 AGCTTGTATCCTCGCGACCT 61.038 55.000 3.71 0.00 0.00 3.85
3948 3994 0.179108 GCTTGTATCCTCGCGACCTT 60.179 55.000 3.71 0.00 0.00 3.50
3949 3995 1.560923 CTTGTATCCTCGCGACCTTG 58.439 55.000 3.71 0.00 0.00 3.61
3950 3996 0.459585 TTGTATCCTCGCGACCTTGC 60.460 55.000 3.71 0.00 0.00 4.01
3951 3997 1.591863 GTATCCTCGCGACCTTGCC 60.592 63.158 3.71 0.00 0.00 4.52
3952 3998 1.756950 TATCCTCGCGACCTTGCCT 60.757 57.895 3.71 0.00 0.00 4.75
3953 3999 0.466739 TATCCTCGCGACCTTGCCTA 60.467 55.000 3.71 0.00 0.00 3.93
3954 4000 1.327690 ATCCTCGCGACCTTGCCTAA 61.328 55.000 3.71 0.00 0.00 2.69
3955 4001 1.810030 CCTCGCGACCTTGCCTAAC 60.810 63.158 3.71 0.00 0.00 2.34
3956 4002 1.810030 CTCGCGACCTTGCCTAACC 60.810 63.158 3.71 0.00 0.00 2.85
3957 4003 3.186047 CGCGACCTTGCCTAACCG 61.186 66.667 0.00 0.00 0.00 4.44
3958 4004 2.263540 GCGACCTTGCCTAACCGA 59.736 61.111 0.00 0.00 0.00 4.69
3959 4005 1.375013 GCGACCTTGCCTAACCGAA 60.375 57.895 0.00 0.00 0.00 4.30
3960 4006 0.743345 GCGACCTTGCCTAACCGAAT 60.743 55.000 0.00 0.00 0.00 3.34
3961 4007 1.734163 CGACCTTGCCTAACCGAATT 58.266 50.000 0.00 0.00 0.00 2.17
3962 4008 1.396996 CGACCTTGCCTAACCGAATTG 59.603 52.381 0.00 0.00 0.00 2.32
3963 4009 1.132453 GACCTTGCCTAACCGAATTGC 59.868 52.381 0.00 0.00 0.00 3.56
3964 4010 1.271926 ACCTTGCCTAACCGAATTGCT 60.272 47.619 0.00 0.00 0.00 3.91
3965 4011 2.026636 ACCTTGCCTAACCGAATTGCTA 60.027 45.455 0.00 0.00 0.00 3.49
3966 4012 3.214328 CCTTGCCTAACCGAATTGCTAT 58.786 45.455 0.00 0.00 0.00 2.97
3967 4013 3.632145 CCTTGCCTAACCGAATTGCTATT 59.368 43.478 0.00 0.00 0.00 1.73
3968 4014 4.097892 CCTTGCCTAACCGAATTGCTATTT 59.902 41.667 0.00 0.00 0.00 1.40
3969 4015 4.893424 TGCCTAACCGAATTGCTATTTC 57.107 40.909 0.00 0.00 0.00 2.17
3970 4016 4.265893 TGCCTAACCGAATTGCTATTTCA 58.734 39.130 0.00 0.00 0.00 2.69
3971 4017 4.095782 TGCCTAACCGAATTGCTATTTCAC 59.904 41.667 0.00 0.00 0.00 3.18
3972 4018 4.095782 GCCTAACCGAATTGCTATTTCACA 59.904 41.667 0.00 0.00 0.00 3.58
3973 4019 5.221048 GCCTAACCGAATTGCTATTTCACAT 60.221 40.000 0.00 0.00 0.00 3.21
3974 4020 6.680378 GCCTAACCGAATTGCTATTTCACATT 60.680 38.462 0.00 0.00 0.00 2.71
3975 4021 7.257722 CCTAACCGAATTGCTATTTCACATTT 58.742 34.615 0.00 0.00 0.00 2.32
3976 4022 8.402472 CCTAACCGAATTGCTATTTCACATTTA 58.598 33.333 0.00 0.00 0.00 1.40
3977 4023 9.438291 CTAACCGAATTGCTATTTCACATTTAG 57.562 33.333 0.00 0.00 0.00 1.85
3978 4024 7.624360 ACCGAATTGCTATTTCACATTTAGA 57.376 32.000 0.00 0.00 0.00 2.10
3979 4025 8.225603 ACCGAATTGCTATTTCACATTTAGAT 57.774 30.769 0.00 0.00 0.00 1.98
3980 4026 8.131100 ACCGAATTGCTATTTCACATTTAGATG 58.869 33.333 0.00 0.00 39.25 2.90
3995 4041 7.916552 ACATTTAGATGTGAAATACTTACCGC 58.083 34.615 0.00 0.00 44.64 5.68
3996 4042 7.551262 ACATTTAGATGTGAAATACTTACCGCA 59.449 33.333 0.00 0.00 44.64 5.69
3997 4043 6.897259 TTAGATGTGAAATACTTACCGCAC 57.103 37.500 0.00 0.00 0.00 5.34
3998 4044 4.827692 AGATGTGAAATACTTACCGCACA 58.172 39.130 0.00 0.00 40.09 4.57
3999 4045 5.428253 AGATGTGAAATACTTACCGCACAT 58.572 37.500 0.00 0.00 46.16 3.21
4000 4046 5.734855 ATGTGAAATACTTACCGCACATC 57.265 39.130 0.00 0.00 41.55 3.06
4001 4047 4.827692 TGTGAAATACTTACCGCACATCT 58.172 39.130 0.00 0.00 32.01 2.90
4002 4048 5.968254 TGTGAAATACTTACCGCACATCTA 58.032 37.500 0.00 0.00 32.01 1.98
4003 4049 6.399743 TGTGAAATACTTACCGCACATCTAA 58.600 36.000 0.00 0.00 32.01 2.10
4004 4050 6.311935 TGTGAAATACTTACCGCACATCTAAC 59.688 38.462 0.00 0.00 32.01 2.34
4005 4051 6.534079 GTGAAATACTTACCGCACATCTAACT 59.466 38.462 0.00 0.00 0.00 2.24
4006 4052 7.064253 GTGAAATACTTACCGCACATCTAACTT 59.936 37.037 0.00 0.00 0.00 2.66
4007 4053 7.277098 TGAAATACTTACCGCACATCTAACTTC 59.723 37.037 0.00 0.00 0.00 3.01
4008 4054 4.530710 ACTTACCGCACATCTAACTTCA 57.469 40.909 0.00 0.00 0.00 3.02
4009 4055 4.495422 ACTTACCGCACATCTAACTTCAG 58.505 43.478 0.00 0.00 0.00 3.02
4010 4056 4.219944 ACTTACCGCACATCTAACTTCAGA 59.780 41.667 0.00 0.00 0.00 3.27
4011 4057 3.678056 ACCGCACATCTAACTTCAGAA 57.322 42.857 0.00 0.00 0.00 3.02
4012 4058 3.326747 ACCGCACATCTAACTTCAGAAC 58.673 45.455 0.00 0.00 0.00 3.01
4013 4059 2.673368 CCGCACATCTAACTTCAGAACC 59.327 50.000 0.00 0.00 0.00 3.62
4014 4060 3.325870 CGCACATCTAACTTCAGAACCA 58.674 45.455 0.00 0.00 0.00 3.67
4015 4061 3.935203 CGCACATCTAACTTCAGAACCAT 59.065 43.478 0.00 0.00 0.00 3.55
4016 4062 4.393062 CGCACATCTAACTTCAGAACCATT 59.607 41.667 0.00 0.00 0.00 3.16
4017 4063 5.634896 GCACATCTAACTTCAGAACCATTG 58.365 41.667 0.00 0.00 0.00 2.82
4018 4064 5.392380 GCACATCTAACTTCAGAACCATTGG 60.392 44.000 0.00 0.00 0.00 3.16
4019 4065 5.939883 CACATCTAACTTCAGAACCATTGGA 59.060 40.000 10.37 0.00 0.00 3.53
4020 4066 6.600822 CACATCTAACTTCAGAACCATTGGAT 59.399 38.462 10.37 0.00 0.00 3.41
4021 4067 6.825721 ACATCTAACTTCAGAACCATTGGATC 59.174 38.462 10.37 7.34 0.00 3.36
4022 4068 6.627087 TCTAACTTCAGAACCATTGGATCT 57.373 37.500 10.37 9.91 35.16 2.75
4023 4069 7.020827 TCTAACTTCAGAACCATTGGATCTT 57.979 36.000 12.47 1.62 32.42 2.40
4024 4070 5.972107 AACTTCAGAACCATTGGATCTTG 57.028 39.130 12.47 8.81 32.42 3.02
4025 4071 4.990526 ACTTCAGAACCATTGGATCTTGT 58.009 39.130 12.47 9.25 32.42 3.16
4026 4072 4.763793 ACTTCAGAACCATTGGATCTTGTG 59.236 41.667 12.47 4.34 32.42 3.33
4027 4073 4.371624 TCAGAACCATTGGATCTTGTGT 57.628 40.909 12.47 0.00 32.42 3.72
4028 4074 4.074259 TCAGAACCATTGGATCTTGTGTG 58.926 43.478 12.47 3.26 32.42 3.82
4029 4075 3.822735 CAGAACCATTGGATCTTGTGTGT 59.177 43.478 12.47 0.00 32.42 3.72
4030 4076 4.074970 AGAACCATTGGATCTTGTGTGTC 58.925 43.478 10.37 0.00 30.49 3.67
4031 4077 3.795688 ACCATTGGATCTTGTGTGTCT 57.204 42.857 10.37 0.00 0.00 3.41
4032 4078 4.104383 ACCATTGGATCTTGTGTGTCTT 57.896 40.909 10.37 0.00 0.00 3.01
4033 4079 4.473444 ACCATTGGATCTTGTGTGTCTTT 58.527 39.130 10.37 0.00 0.00 2.52
4034 4080 5.630121 ACCATTGGATCTTGTGTGTCTTTA 58.370 37.500 10.37 0.00 0.00 1.85
4035 4081 6.068010 ACCATTGGATCTTGTGTGTCTTTAA 58.932 36.000 10.37 0.00 0.00 1.52
4036 4082 6.721208 ACCATTGGATCTTGTGTGTCTTTAAT 59.279 34.615 10.37 0.00 0.00 1.40
4037 4083 7.888021 ACCATTGGATCTTGTGTGTCTTTAATA 59.112 33.333 10.37 0.00 0.00 0.98
4038 4084 8.906867 CCATTGGATCTTGTGTGTCTTTAATAT 58.093 33.333 0.00 0.00 0.00 1.28
4041 4087 8.196802 TGGATCTTGTGTGTCTTTAATATTCG 57.803 34.615 0.00 0.00 0.00 3.34
4042 4088 7.822334 TGGATCTTGTGTGTCTTTAATATTCGT 59.178 33.333 0.00 0.00 0.00 3.85
4043 4089 8.665685 GGATCTTGTGTGTCTTTAATATTCGTT 58.334 33.333 0.00 0.00 0.00 3.85
4046 4092 9.658475 TCTTGTGTGTCTTTAATATTCGTTTTG 57.342 29.630 0.00 0.00 0.00 2.44
4103 4149 4.214971 ACTTTGCGAAGTCTAAGTCGACTA 59.785 41.667 20.39 0.00 42.35 2.59
4106 4152 3.120060 TGCGAAGTCTAAGTCGACTAACC 60.120 47.826 20.39 7.39 43.14 2.85
4108 4154 4.331168 GCGAAGTCTAAGTCGACTAACCTA 59.669 45.833 20.39 6.51 43.14 3.08
4129 4175 9.647797 AACCTAATATATAATTTGATCGCACGA 57.352 29.630 0.00 0.00 0.00 4.35
4140 4187 2.028763 TGATCGCACGATTTAACTTCGC 59.971 45.455 7.02 0.00 40.19 4.70
4185 4630 2.147958 TGTTCGTTATGTGTTGGCCTC 58.852 47.619 3.32 0.00 0.00 4.70
4254 4699 6.183360 TGTTGACATTGTCTATTTGTTGTGCT 60.183 34.615 17.26 0.00 33.15 4.40
4300 4758 5.768317 TGTGCTTTTTACTGGAATTGCTAC 58.232 37.500 0.00 0.00 0.00 3.58
4364 4823 7.820044 AGCTCTTATATTTTACGCTAGCATC 57.180 36.000 16.45 0.00 0.00 3.91
4399 4860 9.003658 TCTGTTCCTTCTTTTTATGTCATCTTC 57.996 33.333 0.00 0.00 0.00 2.87
4591 5060 7.177744 TGTCAATATTACTTTGGAAGGGGAAAC 59.822 37.037 0.00 0.00 0.00 2.78
4688 5157 0.662374 GCTGACATGTGTGCAACTGC 60.662 55.000 1.15 0.00 38.04 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 6.377146 TGGATTGAGATTTTAGGGCTACAAAC 59.623 38.462 0.00 0.00 0.00 2.93
462 463 0.179029 CCCCCGTCTCTCTCTCTCTC 60.179 65.000 0.00 0.00 0.00 3.20
576 577 4.662961 TCAGGTGCCACGTCGCAG 62.663 66.667 8.49 0.00 40.05 5.18
718 719 4.744631 CCACCACATTTGAAGTTTAAGCAC 59.255 41.667 0.00 0.00 0.00 4.40
761 762 3.344535 TCTGTTCTAGGCCATCCCATA 57.655 47.619 5.01 0.00 35.39 2.74
762 763 2.196742 TCTGTTCTAGGCCATCCCAT 57.803 50.000 5.01 0.00 35.39 4.00
763 764 2.196742 ATCTGTTCTAGGCCATCCCA 57.803 50.000 5.01 0.00 35.39 4.37
764 765 3.584733 AAATCTGTTCTAGGCCATCCC 57.415 47.619 5.01 0.00 0.00 3.85
765 766 8.734386 CATAATTAAATCTGTTCTAGGCCATCC 58.266 37.037 5.01 0.00 0.00 3.51
766 767 9.289782 ACATAATTAAATCTGTTCTAGGCCATC 57.710 33.333 5.01 0.00 0.00 3.51
767 768 9.646522 AACATAATTAAATCTGTTCTAGGCCAT 57.353 29.630 5.01 0.00 0.00 4.40
768 769 8.902806 CAACATAATTAAATCTGTTCTAGGCCA 58.097 33.333 5.01 0.00 29.74 5.36
769 770 8.352942 CCAACATAATTAAATCTGTTCTAGGCC 58.647 37.037 0.00 0.00 29.74 5.19
770 771 7.862873 GCCAACATAATTAAATCTGTTCTAGGC 59.137 37.037 11.00 11.00 33.72 3.93
771 772 8.352942 GGCCAACATAATTAAATCTGTTCTAGG 58.647 37.037 0.00 1.47 29.74 3.02
772 773 8.070171 CGGCCAACATAATTAAATCTGTTCTAG 58.930 37.037 2.24 0.00 29.74 2.43
773 774 7.468084 GCGGCCAACATAATTAAATCTGTTCTA 60.468 37.037 2.24 0.00 29.74 2.10
774 775 6.680378 GCGGCCAACATAATTAAATCTGTTCT 60.680 38.462 2.24 0.00 29.74 3.01
775 776 5.458779 GCGGCCAACATAATTAAATCTGTTC 59.541 40.000 2.24 0.00 29.74 3.18
776 777 5.348164 GCGGCCAACATAATTAAATCTGTT 58.652 37.500 2.24 0.00 32.27 3.16
777 778 4.497340 CGCGGCCAACATAATTAAATCTGT 60.497 41.667 2.24 0.00 0.00 3.41
778 779 3.974401 CGCGGCCAACATAATTAAATCTG 59.026 43.478 2.24 0.00 0.00 2.90
779 780 3.550030 GCGCGGCCAACATAATTAAATCT 60.550 43.478 8.83 0.00 0.00 2.40
780 781 2.724174 GCGCGGCCAACATAATTAAATC 59.276 45.455 8.83 0.00 0.00 2.17
781 782 2.099921 TGCGCGGCCAACATAATTAAAT 59.900 40.909 8.83 0.00 0.00 1.40
782 783 1.472878 TGCGCGGCCAACATAATTAAA 59.527 42.857 8.83 0.00 0.00 1.52
783 784 1.095600 TGCGCGGCCAACATAATTAA 58.904 45.000 8.83 0.00 0.00 1.40
784 785 1.064803 CTTGCGCGGCCAACATAATTA 59.935 47.619 8.83 0.00 0.00 1.40
785 786 0.179140 CTTGCGCGGCCAACATAATT 60.179 50.000 8.83 0.00 0.00 1.40
786 787 1.029408 TCTTGCGCGGCCAACATAAT 61.029 50.000 8.83 0.00 0.00 1.28
787 788 1.643868 CTCTTGCGCGGCCAACATAA 61.644 55.000 8.83 0.00 0.00 1.90
788 789 2.046796 TCTTGCGCGGCCAACATA 60.047 55.556 8.83 0.00 0.00 2.29
789 790 3.434319 CTCTTGCGCGGCCAACAT 61.434 61.111 8.83 0.00 0.00 2.71
797 798 4.697756 TTCCACCCCTCTTGCGCG 62.698 66.667 0.00 0.00 0.00 6.86
798 799 3.056328 GTTCCACCCCTCTTGCGC 61.056 66.667 0.00 0.00 0.00 6.09
799 800 2.742372 CGTTCCACCCCTCTTGCG 60.742 66.667 0.00 0.00 0.00 4.85
800 801 1.228154 AACGTTCCACCCCTCTTGC 60.228 57.895 0.00 0.00 0.00 4.01
801 802 0.107831 TGAACGTTCCACCCCTCTTG 59.892 55.000 24.78 0.00 0.00 3.02
802 803 0.841289 TTGAACGTTCCACCCCTCTT 59.159 50.000 24.78 0.00 0.00 2.85
803 804 1.064825 ATTGAACGTTCCACCCCTCT 58.935 50.000 24.78 0.00 0.00 3.69
804 805 1.165270 CATTGAACGTTCCACCCCTC 58.835 55.000 24.78 0.00 0.00 4.30
805 806 0.768622 TCATTGAACGTTCCACCCCT 59.231 50.000 24.78 0.00 0.00 4.79
806 807 1.268625 GTTCATTGAACGTTCCACCCC 59.731 52.381 24.78 5.63 32.81 4.95
807 808 1.950909 TGTTCATTGAACGTTCCACCC 59.049 47.619 24.78 8.94 44.55 4.61
808 809 2.601266 CGTGTTCATTGAACGTTCCACC 60.601 50.000 24.78 7.95 44.55 4.61
809 810 2.601266 CCGTGTTCATTGAACGTTCCAC 60.601 50.000 24.78 20.69 44.55 4.02
810 811 1.600013 CCGTGTTCATTGAACGTTCCA 59.400 47.619 24.78 15.27 44.55 3.53
811 812 1.662026 GCCGTGTTCATTGAACGTTCC 60.662 52.381 24.78 9.23 44.55 3.62
812 813 1.670326 GCCGTGTTCATTGAACGTTC 58.330 50.000 21.42 21.42 44.55 3.95
813 814 0.041663 CGCCGTGTTCATTGAACGTT 60.042 50.000 21.27 0.00 44.55 3.99
814 815 1.155424 ACGCCGTGTTCATTGAACGT 61.155 50.000 21.27 13.74 44.55 3.99
815 816 0.450482 GACGCCGTGTTCATTGAACG 60.450 55.000 21.27 13.09 44.55 3.95
816 817 0.110373 GGACGCCGTGTTCATTGAAC 60.110 55.000 20.27 20.27 42.26 3.18
817 818 0.250124 AGGACGCCGTGTTCATTGAA 60.250 50.000 0.00 0.00 0.00 2.69
818 819 0.948623 CAGGACGCCGTGTTCATTGA 60.949 55.000 0.00 0.00 0.00 2.57
819 820 0.948623 TCAGGACGCCGTGTTCATTG 60.949 55.000 0.00 0.00 0.00 2.82
820 821 0.670546 CTCAGGACGCCGTGTTCATT 60.671 55.000 0.00 0.00 0.00 2.57
821 822 1.079819 CTCAGGACGCCGTGTTCAT 60.080 57.895 0.00 0.00 0.00 2.57
822 823 2.023414 AACTCAGGACGCCGTGTTCA 62.023 55.000 0.00 0.00 0.00 3.18
823 824 0.038892 TAACTCAGGACGCCGTGTTC 60.039 55.000 0.00 0.00 0.00 3.18
824 825 0.038526 CTAACTCAGGACGCCGTGTT 60.039 55.000 0.00 0.00 0.00 3.32
825 826 1.177256 ACTAACTCAGGACGCCGTGT 61.177 55.000 0.00 0.00 0.00 4.49
826 827 0.456312 GACTAACTCAGGACGCCGTG 60.456 60.000 0.00 0.00 0.00 4.94
827 828 0.892358 TGACTAACTCAGGACGCCGT 60.892 55.000 0.00 0.00 0.00 5.68
828 829 0.179161 CTGACTAACTCAGGACGCCG 60.179 60.000 0.00 0.00 42.69 6.46
829 830 0.458716 GCTGACTAACTCAGGACGCC 60.459 60.000 0.00 0.00 46.08 5.68
830 831 0.243907 TGCTGACTAACTCAGGACGC 59.756 55.000 0.00 0.00 46.08 5.19
833 834 1.269723 CACGTGCTGACTAACTCAGGA 59.730 52.381 0.82 0.00 46.08 3.86
834 835 1.000163 ACACGTGCTGACTAACTCAGG 60.000 52.381 17.22 0.00 46.08 3.86
836 837 2.100087 TCAACACGTGCTGACTAACTCA 59.900 45.455 17.33 0.00 0.00 3.41
837 838 2.471743 GTCAACACGTGCTGACTAACTC 59.528 50.000 33.88 14.87 37.94 3.01
838 839 2.470821 GTCAACACGTGCTGACTAACT 58.529 47.619 33.88 4.37 37.94 2.24
839 840 1.189446 CGTCAACACGTGCTGACTAAC 59.811 52.381 35.83 19.75 41.42 2.34
863 864 1.066303 CCTTGAGCTACGAGCCTACAG 59.934 57.143 0.00 0.00 43.77 2.74
864 865 1.103803 CCTTGAGCTACGAGCCTACA 58.896 55.000 0.00 0.00 43.77 2.74
873 874 6.092807 GCTGCATATATAAACCCTTGAGCTAC 59.907 42.308 0.00 0.00 0.00 3.58
911 912 2.516930 GGTGTGCCGATGGATGGG 60.517 66.667 0.00 0.00 0.00 4.00
926 927 1.201429 AAGCGTGGGAGGAAGATGGT 61.201 55.000 0.00 0.00 0.00 3.55
949 950 5.809001 TCTCTGTTATCTTTGGTGCAAGAT 58.191 37.500 4.16 4.16 0.00 2.40
960 961 6.239008 GCAGTGAGCTCTATCTCTGTTATCTT 60.239 42.308 16.19 0.00 40.98 2.40
963 964 4.280677 GGCAGTGAGCTCTATCTCTGTTAT 59.719 45.833 16.19 0.00 44.79 1.89
985 986 1.384222 GCCATTTTCCTAGCCACGGG 61.384 60.000 0.00 0.00 0.00 5.28
987 988 0.742990 TCGCCATTTTCCTAGCCACG 60.743 55.000 0.00 0.00 0.00 4.94
1006 1007 1.168407 TTCACCTTCTCGGTCGACGT 61.168 55.000 9.92 0.00 44.93 4.34
1024 1025 2.049433 CGCTCCGGTGTCGAACTT 60.049 61.111 12.82 0.00 39.00 2.66
1056 1063 2.915659 TCCCACGACGGCTCTTGT 60.916 61.111 0.00 0.00 0.00 3.16
1176 1183 2.792599 CGTCCTTCTCCGTCGAGG 59.207 66.667 0.00 0.00 42.97 4.63
1178 1185 2.359602 AGCGTCCTTCTCCGTCGA 60.360 61.111 0.00 0.00 0.00 4.20
1510 1517 2.683933 TTGCGAGGGGGAGGTCTC 60.684 66.667 0.00 0.00 0.00 3.36
1821 1831 0.753262 ACCCGTACATCTGCAGATCC 59.247 55.000 26.44 15.42 31.21 3.36
1824 1834 1.262417 TGAACCCGTACATCTGCAGA 58.738 50.000 20.79 20.79 0.00 4.26
1825 1835 2.205074 GATGAACCCGTACATCTGCAG 58.795 52.381 7.63 7.63 39.52 4.41
2167 2180 1.295792 TCGTTCTTGTTGCCTGTGTC 58.704 50.000 0.00 0.00 0.00 3.67
2523 2548 1.517257 GATGGAGGTGCTCACGTCG 60.517 63.158 14.16 0.00 44.55 5.12
2626 2651 2.289547 CGATCCTTCTCTTCTCCTCGTC 59.710 54.545 0.00 0.00 0.00 4.20
2640 2668 2.509336 CGCCGCTTGTCGATCCTT 60.509 61.111 0.00 0.00 41.67 3.36
2727 2755 1.005215 CCATCTTTGGTCCAGAAGCCT 59.995 52.381 8.24 0.00 38.30 4.58
2793 2836 2.033208 GCCAGGTACCTTCTCCGGTAT 61.033 57.143 13.15 0.00 41.31 2.73
2856 2899 0.811281 TCACGAGCATGACGATGAGT 59.189 50.000 16.99 0.00 34.70 3.41
3000 3043 2.254350 CCGACGAGCACGAAGACA 59.746 61.111 11.40 0.00 42.66 3.41
3051 3094 5.447279 GCTTTCGAAGAACTTGAAGAACACA 60.447 40.000 0.00 0.00 45.90 3.72
3086 3129 1.080974 GAGCCGTTTTCTCCGTCGA 60.081 57.895 0.00 0.00 0.00 4.20
3129 3172 2.045536 GCCTTACTGCTGCTGCCT 60.046 61.111 13.47 0.62 38.71 4.75
3178 3224 1.538876 TGGGCTTGGGTGAGCTACT 60.539 57.895 0.00 0.00 42.32 2.57
3222 3268 1.227263 CATCAGGTACTTCCGCCGG 60.227 63.158 0.00 0.00 41.99 6.13
3677 3723 4.218312 ACATCTCCTTGTTTCTTTTGGCT 58.782 39.130 0.00 0.00 0.00 4.75
3681 3727 5.008712 GGACGAACATCTCCTTGTTTCTTTT 59.991 40.000 0.00 0.00 39.85 2.27
3687 3733 2.028020 GGAGGACGAACATCTCCTTGTT 60.028 50.000 0.00 0.00 42.70 2.83
3702 3748 2.266055 CTTCAGCACGGGGAGGAC 59.734 66.667 0.00 0.00 0.00 3.85
3714 3760 3.485431 CGGCGCTGTGAGCTTCAG 61.485 66.667 8.45 13.28 39.60 3.02
3720 3766 1.370414 CCAAAAACGGCGCTGTGAG 60.370 57.895 25.11 12.73 0.00 3.51
3721 3767 1.658686 AACCAAAAACGGCGCTGTGA 61.659 50.000 25.11 0.00 0.00 3.58
3722 3768 0.029567 TAACCAAAAACGGCGCTGTG 59.970 50.000 25.11 12.59 0.00 3.66
3723 3769 0.309612 CTAACCAAAAACGGCGCTGT 59.690 50.000 18.16 18.16 0.00 4.40
3724 3770 1.001745 GCTAACCAAAAACGGCGCTG 61.002 55.000 16.39 16.39 0.00 5.18
3725 3771 1.170290 AGCTAACCAAAAACGGCGCT 61.170 50.000 6.90 0.00 0.00 5.92
3726 3772 1.001745 CAGCTAACCAAAAACGGCGC 61.002 55.000 6.90 0.00 0.00 6.53
3727 3773 0.309612 ACAGCTAACCAAAAACGGCG 59.690 50.000 4.80 4.80 0.00 6.46
3728 3774 2.124122 CAACAGCTAACCAAAAACGGC 58.876 47.619 0.00 0.00 0.00 5.68
3729 3775 3.701532 TCAACAGCTAACCAAAAACGG 57.298 42.857 0.00 0.00 0.00 4.44
3730 3776 5.556194 GCAATTCAACAGCTAACCAAAAACG 60.556 40.000 0.00 0.00 0.00 3.60
3731 3777 5.523552 AGCAATTCAACAGCTAACCAAAAAC 59.476 36.000 0.00 0.00 36.73 2.43
3732 3778 5.523188 CAGCAATTCAACAGCTAACCAAAAA 59.477 36.000 0.00 0.00 36.73 1.94
3733 3779 5.049167 CAGCAATTCAACAGCTAACCAAAA 58.951 37.500 0.00 0.00 36.73 2.44
3734 3780 4.340666 TCAGCAATTCAACAGCTAACCAAA 59.659 37.500 0.00 0.00 36.73 3.28
3735 3781 3.888323 TCAGCAATTCAACAGCTAACCAA 59.112 39.130 0.00 0.00 36.73 3.67
3736 3782 3.485394 TCAGCAATTCAACAGCTAACCA 58.515 40.909 0.00 0.00 36.73 3.67
3737 3783 4.708726 ATCAGCAATTCAACAGCTAACC 57.291 40.909 0.00 0.00 36.73 2.85
3738 3784 4.860907 CCAATCAGCAATTCAACAGCTAAC 59.139 41.667 0.00 0.00 36.73 2.34
3739 3785 4.618927 GCCAATCAGCAATTCAACAGCTAA 60.619 41.667 0.00 0.00 36.73 3.09
3740 3786 3.119388 GCCAATCAGCAATTCAACAGCTA 60.119 43.478 0.00 0.00 36.73 3.32
3741 3787 2.353406 GCCAATCAGCAATTCAACAGCT 60.353 45.455 0.00 0.00 39.63 4.24
3742 3788 1.997606 GCCAATCAGCAATTCAACAGC 59.002 47.619 0.00 0.00 0.00 4.40
3743 3789 3.306917 TGCCAATCAGCAATTCAACAG 57.693 42.857 0.00 0.00 40.56 3.16
3762 3808 2.558286 GGACATGCATGGCGGGATG 61.558 63.158 29.41 4.81 41.75 3.51
3763 3809 2.203394 GGACATGCATGGCGGGAT 60.203 61.111 29.41 8.33 36.40 3.85
3764 3810 2.891941 GAAGGACATGCATGGCGGGA 62.892 60.000 29.41 0.00 36.40 5.14
3765 3811 2.440796 AAGGACATGCATGGCGGG 60.441 61.111 29.41 5.50 36.40 6.13
3766 3812 1.314534 TTGAAGGACATGCATGGCGG 61.315 55.000 29.41 5.90 36.40 6.13
3767 3813 0.527113 TTTGAAGGACATGCATGGCG 59.473 50.000 29.41 6.29 36.40 5.69
3768 3814 2.546778 CATTTGAAGGACATGCATGGC 58.453 47.619 29.41 27.45 34.16 4.40
3769 3815 2.498481 ACCATTTGAAGGACATGCATGG 59.502 45.455 29.41 12.04 37.17 3.66
3770 3816 3.880047 ACCATTTGAAGGACATGCATG 57.120 42.857 25.09 25.09 0.00 4.06
3771 3817 6.549433 AATAACCATTTGAAGGACATGCAT 57.451 33.333 0.00 0.00 0.00 3.96
3772 3818 5.999205 AATAACCATTTGAAGGACATGCA 57.001 34.783 0.00 0.00 0.00 3.96
3773 3819 5.516339 CGAAATAACCATTTGAAGGACATGC 59.484 40.000 0.00 0.00 34.44 4.06
3774 3820 6.035843 CCGAAATAACCATTTGAAGGACATG 58.964 40.000 0.00 0.00 34.44 3.21
3775 3821 5.127031 CCCGAAATAACCATTTGAAGGACAT 59.873 40.000 0.00 0.00 34.44 3.06
3776 3822 4.461081 CCCGAAATAACCATTTGAAGGACA 59.539 41.667 0.00 0.00 34.44 4.02
3777 3823 4.703093 TCCCGAAATAACCATTTGAAGGAC 59.297 41.667 0.00 0.00 34.44 3.85
3778 3824 4.924625 TCCCGAAATAACCATTTGAAGGA 58.075 39.130 0.00 0.00 34.44 3.36
3779 3825 5.417580 TCTTCCCGAAATAACCATTTGAAGG 59.582 40.000 0.00 0.00 34.98 3.46
3780 3826 6.509418 TCTTCCCGAAATAACCATTTGAAG 57.491 37.500 0.00 0.00 35.26 3.02
3781 3827 6.265649 TGTTCTTCCCGAAATAACCATTTGAA 59.734 34.615 0.00 0.00 34.44 2.69
3782 3828 5.770663 TGTTCTTCCCGAAATAACCATTTGA 59.229 36.000 0.00 0.00 34.44 2.69
3783 3829 6.019779 TGTTCTTCCCGAAATAACCATTTG 57.980 37.500 0.00 0.00 34.44 2.32
3784 3830 6.007703 TCTGTTCTTCCCGAAATAACCATTT 58.992 36.000 0.00 0.00 37.06 2.32
3785 3831 5.566469 TCTGTTCTTCCCGAAATAACCATT 58.434 37.500 0.00 0.00 32.41 3.16
3786 3832 5.174037 TCTGTTCTTCCCGAAATAACCAT 57.826 39.130 0.00 0.00 32.41 3.55
3787 3833 4.627284 TCTGTTCTTCCCGAAATAACCA 57.373 40.909 0.00 0.00 32.41 3.67
3788 3834 4.201920 GCATCTGTTCTTCCCGAAATAACC 60.202 45.833 0.00 0.00 32.41 2.85
3789 3835 4.394920 TGCATCTGTTCTTCCCGAAATAAC 59.605 41.667 0.00 0.00 32.41 1.89
3790 3836 4.394920 GTGCATCTGTTCTTCCCGAAATAA 59.605 41.667 0.00 0.00 32.41 1.40
3791 3837 3.938963 GTGCATCTGTTCTTCCCGAAATA 59.061 43.478 0.00 0.00 32.41 1.40
3792 3838 2.749621 GTGCATCTGTTCTTCCCGAAAT 59.250 45.455 0.00 0.00 32.41 2.17
3793 3839 2.151202 GTGCATCTGTTCTTCCCGAAA 58.849 47.619 0.00 0.00 32.41 3.46
3794 3840 1.808411 GTGCATCTGTTCTTCCCGAA 58.192 50.000 0.00 0.00 0.00 4.30
3795 3841 0.389817 CGTGCATCTGTTCTTCCCGA 60.390 55.000 0.00 0.00 0.00 5.14
3796 3842 1.361668 CCGTGCATCTGTTCTTCCCG 61.362 60.000 0.00 0.00 0.00 5.14
3797 3843 0.036388 TCCGTGCATCTGTTCTTCCC 60.036 55.000 0.00 0.00 0.00 3.97
3798 3844 2.029838 ATCCGTGCATCTGTTCTTCC 57.970 50.000 0.00 0.00 0.00 3.46
3799 3845 3.786635 AGTATCCGTGCATCTGTTCTTC 58.213 45.455 0.00 0.00 0.00 2.87
3800 3846 3.895232 AGTATCCGTGCATCTGTTCTT 57.105 42.857 0.00 0.00 0.00 2.52
3801 3847 4.584743 TCATAGTATCCGTGCATCTGTTCT 59.415 41.667 0.00 0.00 0.00 3.01
3802 3848 4.871513 TCATAGTATCCGTGCATCTGTTC 58.128 43.478 0.00 0.00 0.00 3.18
3803 3849 4.937201 TCATAGTATCCGTGCATCTGTT 57.063 40.909 0.00 0.00 0.00 3.16
3804 3850 4.937201 TTCATAGTATCCGTGCATCTGT 57.063 40.909 0.00 0.00 0.00 3.41
3805 3851 5.575995 CAGATTCATAGTATCCGTGCATCTG 59.424 44.000 0.00 0.00 37.31 2.90
3806 3852 5.244851 ACAGATTCATAGTATCCGTGCATCT 59.755 40.000 0.00 0.00 0.00 2.90
3807 3853 5.473931 ACAGATTCATAGTATCCGTGCATC 58.526 41.667 0.00 0.00 0.00 3.91
3808 3854 5.474578 ACAGATTCATAGTATCCGTGCAT 57.525 39.130 0.00 0.00 0.00 3.96
3809 3855 4.937201 ACAGATTCATAGTATCCGTGCA 57.063 40.909 0.00 0.00 0.00 4.57
3810 3856 6.255596 TCTACAGATTCATAGTATCCGTGC 57.744 41.667 0.00 0.00 0.00 5.34
3811 3857 7.965655 GTCATCTACAGATTCATAGTATCCGTG 59.034 40.741 0.00 0.00 31.21 4.94
3812 3858 7.665974 TGTCATCTACAGATTCATAGTATCCGT 59.334 37.037 0.00 0.00 33.01 4.69
3813 3859 7.965655 GTGTCATCTACAGATTCATAGTATCCG 59.034 40.741 0.00 0.00 39.29 4.18
3814 3860 7.965655 CGTGTCATCTACAGATTCATAGTATCC 59.034 40.741 0.00 0.00 39.29 2.59
3815 3861 8.508062 ACGTGTCATCTACAGATTCATAGTATC 58.492 37.037 0.00 0.00 39.29 2.24
3816 3862 8.397575 ACGTGTCATCTACAGATTCATAGTAT 57.602 34.615 0.00 0.00 39.29 2.12
3817 3863 7.803279 ACGTGTCATCTACAGATTCATAGTA 57.197 36.000 0.00 0.00 39.29 1.82
3818 3864 6.701145 ACGTGTCATCTACAGATTCATAGT 57.299 37.500 0.00 0.00 39.29 2.12
3819 3865 7.196331 TGAACGTGTCATCTACAGATTCATAG 58.804 38.462 0.00 0.00 37.84 2.23
3820 3866 7.095695 TGAACGTGTCATCTACAGATTCATA 57.904 36.000 0.00 0.00 37.84 2.15
3821 3867 5.965922 TGAACGTGTCATCTACAGATTCAT 58.034 37.500 0.00 0.00 37.84 2.57
3822 3868 5.048013 ACTGAACGTGTCATCTACAGATTCA 60.048 40.000 0.00 0.00 39.29 2.57
3823 3869 5.403246 ACTGAACGTGTCATCTACAGATTC 58.597 41.667 0.00 0.00 39.29 2.52
3824 3870 5.392767 ACTGAACGTGTCATCTACAGATT 57.607 39.130 0.00 0.00 39.29 2.40
3825 3871 5.392767 AACTGAACGTGTCATCTACAGAT 57.607 39.130 0.00 0.00 39.29 2.90
3826 3872 4.848562 AACTGAACGTGTCATCTACAGA 57.151 40.909 0.00 0.00 39.29 3.41
3827 3873 6.088217 CAGTTAACTGAACGTGTCATCTACAG 59.912 42.308 28.17 0.00 46.59 2.74
3828 3874 5.918576 CAGTTAACTGAACGTGTCATCTACA 59.081 40.000 28.17 0.00 46.59 2.74
3829 3875 6.377406 CAGTTAACTGAACGTGTCATCTAC 57.623 41.667 28.17 0.00 46.59 2.59
3843 3889 8.761497 TGTTATCTTCTTCGTTTCAGTTAACTG 58.239 33.333 26.60 26.60 45.08 3.16
3844 3890 8.762426 GTGTTATCTTCTTCGTTTCAGTTAACT 58.238 33.333 1.12 1.12 0.00 2.24
3845 3891 7.734726 CGTGTTATCTTCTTCGTTTCAGTTAAC 59.265 37.037 0.00 0.00 0.00 2.01
3846 3892 7.436080 ACGTGTTATCTTCTTCGTTTCAGTTAA 59.564 33.333 0.00 0.00 0.00 2.01
3847 3893 6.919662 ACGTGTTATCTTCTTCGTTTCAGTTA 59.080 34.615 0.00 0.00 0.00 2.24
3848 3894 5.751990 ACGTGTTATCTTCTTCGTTTCAGTT 59.248 36.000 0.00 0.00 0.00 3.16
3849 3895 5.287226 ACGTGTTATCTTCTTCGTTTCAGT 58.713 37.500 0.00 0.00 0.00 3.41
3850 3896 5.824243 ACGTGTTATCTTCTTCGTTTCAG 57.176 39.130 0.00 0.00 0.00 3.02
3851 3897 5.749588 TGAACGTGTTATCTTCTTCGTTTCA 59.250 36.000 0.00 0.00 40.60 2.69
3852 3898 6.074463 ACTGAACGTGTTATCTTCTTCGTTTC 60.074 38.462 0.00 0.00 40.60 2.78
3853 3899 5.751990 ACTGAACGTGTTATCTTCTTCGTTT 59.248 36.000 0.00 0.00 40.60 3.60
3854 3900 5.287226 ACTGAACGTGTTATCTTCTTCGTT 58.713 37.500 0.00 0.00 42.59 3.85
3855 3901 4.868067 ACTGAACGTGTTATCTTCTTCGT 58.132 39.130 0.00 0.00 0.00 3.85
3856 3902 5.824243 AACTGAACGTGTTATCTTCTTCG 57.176 39.130 0.00 0.00 0.00 3.79
3857 3903 8.215132 CAGTTAACTGAACGTGTTATCTTCTTC 58.785 37.037 28.17 0.00 46.59 2.87
3858 3904 8.073355 CAGTTAACTGAACGTGTTATCTTCTT 57.927 34.615 28.17 0.00 46.59 2.52
3859 3905 7.639162 CAGTTAACTGAACGTGTTATCTTCT 57.361 36.000 28.17 0.00 46.59 2.85
3874 3920 7.059945 GCATCATTTCTTCGTTTCAGTTAACTG 59.940 37.037 26.60 26.60 45.08 3.16
3875 3921 7.078228 GCATCATTTCTTCGTTTCAGTTAACT 58.922 34.615 1.12 1.12 0.00 2.24
3876 3922 6.855914 TGCATCATTTCTTCGTTTCAGTTAAC 59.144 34.615 0.00 0.00 0.00 2.01
3877 3923 6.964908 TGCATCATTTCTTCGTTTCAGTTAA 58.035 32.000 0.00 0.00 0.00 2.01
3878 3924 6.552859 TGCATCATTTCTTCGTTTCAGTTA 57.447 33.333 0.00 0.00 0.00 2.24
3879 3925 5.437289 TGCATCATTTCTTCGTTTCAGTT 57.563 34.783 0.00 0.00 0.00 3.16
3880 3926 5.239306 TCTTGCATCATTTCTTCGTTTCAGT 59.761 36.000 0.00 0.00 0.00 3.41
3881 3927 5.692814 TCTTGCATCATTTCTTCGTTTCAG 58.307 37.500 0.00 0.00 0.00 3.02
3882 3928 5.687770 TCTTGCATCATTTCTTCGTTTCA 57.312 34.783 0.00 0.00 0.00 2.69
3883 3929 5.058492 CGTTCTTGCATCATTTCTTCGTTTC 59.942 40.000 0.00 0.00 0.00 2.78
3884 3930 4.911610 CGTTCTTGCATCATTTCTTCGTTT 59.088 37.500 0.00 0.00 0.00 3.60
3885 3931 4.213270 TCGTTCTTGCATCATTTCTTCGTT 59.787 37.500 0.00 0.00 0.00 3.85
3886 3932 3.745975 TCGTTCTTGCATCATTTCTTCGT 59.254 39.130 0.00 0.00 0.00 3.85
3887 3933 4.084507 GTCGTTCTTGCATCATTTCTTCG 58.915 43.478 0.00 0.00 0.00 3.79
3888 3934 5.034554 TGTCGTTCTTGCATCATTTCTTC 57.965 39.130 0.00 0.00 0.00 2.87
3889 3935 5.181811 TCATGTCGTTCTTGCATCATTTCTT 59.818 36.000 0.00 0.00 0.00 2.52
3890 3936 4.696877 TCATGTCGTTCTTGCATCATTTCT 59.303 37.500 0.00 0.00 0.00 2.52
3891 3937 4.973396 TCATGTCGTTCTTGCATCATTTC 58.027 39.130 0.00 0.00 0.00 2.17
3892 3938 5.375417 TTCATGTCGTTCTTGCATCATTT 57.625 34.783 0.00 0.00 0.00 2.32
3893 3939 4.142534 CCTTCATGTCGTTCTTGCATCATT 60.143 41.667 0.00 0.00 0.00 2.57
3894 3940 3.376234 CCTTCATGTCGTTCTTGCATCAT 59.624 43.478 0.00 0.00 0.00 2.45
3895 3941 2.743664 CCTTCATGTCGTTCTTGCATCA 59.256 45.455 0.00 0.00 0.00 3.07
3896 3942 2.096496 CCCTTCATGTCGTTCTTGCATC 59.904 50.000 0.00 0.00 0.00 3.91
3897 3943 2.086869 CCCTTCATGTCGTTCTTGCAT 58.913 47.619 0.00 0.00 0.00 3.96
3898 3944 1.522668 CCCTTCATGTCGTTCTTGCA 58.477 50.000 0.00 0.00 0.00 4.08
3899 3945 0.804989 CCCCTTCATGTCGTTCTTGC 59.195 55.000 0.00 0.00 0.00 4.01
3900 3946 2.185004 ACCCCTTCATGTCGTTCTTG 57.815 50.000 0.00 0.00 0.00 3.02
3901 3947 2.353406 CGTACCCCTTCATGTCGTTCTT 60.353 50.000 0.00 0.00 0.00 2.52
3902 3948 1.203994 CGTACCCCTTCATGTCGTTCT 59.796 52.381 0.00 0.00 0.00 3.01
3903 3949 1.636988 CGTACCCCTTCATGTCGTTC 58.363 55.000 0.00 0.00 0.00 3.95
3904 3950 0.390735 GCGTACCCCTTCATGTCGTT 60.391 55.000 0.00 0.00 0.00 3.85
3905 3951 1.217244 GCGTACCCCTTCATGTCGT 59.783 57.895 0.00 0.00 0.00 4.34
3906 3952 1.876714 CGCGTACCCCTTCATGTCG 60.877 63.158 0.00 0.00 0.00 4.35
3907 3953 2.171725 GCGCGTACCCCTTCATGTC 61.172 63.158 8.43 0.00 0.00 3.06
3908 3954 2.125269 GCGCGTACCCCTTCATGT 60.125 61.111 8.43 0.00 0.00 3.21
3909 3955 3.261951 CGCGCGTACCCCTTCATG 61.262 66.667 24.19 0.00 0.00 3.07
3918 3964 2.398800 GATACAAGCTGCGCGCGTAC 62.399 60.000 32.35 20.42 45.59 3.67
3919 3965 2.202690 ATACAAGCTGCGCGCGTA 60.203 55.556 32.35 27.13 45.59 4.42
3920 3966 3.554692 GATACAAGCTGCGCGCGT 61.555 61.111 32.35 19.74 45.59 6.01
3921 3967 4.285149 GGATACAAGCTGCGCGCG 62.285 66.667 28.44 28.44 45.59 6.86
3922 3968 2.875786 GAGGATACAAGCTGCGCGC 61.876 63.158 27.26 27.26 41.41 6.86
3923 3969 2.580470 CGAGGATACAAGCTGCGCG 61.580 63.158 0.00 0.00 41.41 6.86
3924 3970 2.875786 GCGAGGATACAAGCTGCGC 61.876 63.158 0.00 0.00 38.08 6.09
3925 3971 2.580470 CGCGAGGATACAAGCTGCG 61.580 63.158 0.00 0.00 38.80 5.18
3926 3972 1.226974 TCGCGAGGATACAAGCTGC 60.227 57.895 3.71 0.00 38.80 5.25
3927 3973 0.872021 GGTCGCGAGGATACAAGCTG 60.872 60.000 10.24 0.00 38.80 4.24
3928 3974 1.038130 AGGTCGCGAGGATACAAGCT 61.038 55.000 10.24 0.00 38.80 3.74
3929 3975 0.179108 AAGGTCGCGAGGATACAAGC 60.179 55.000 10.24 0.00 41.41 4.01
3930 3976 1.560923 CAAGGTCGCGAGGATACAAG 58.439 55.000 10.24 0.00 41.41 3.16
3931 3977 0.459585 GCAAGGTCGCGAGGATACAA 60.460 55.000 10.24 0.00 41.41 2.41
3932 3978 1.141019 GCAAGGTCGCGAGGATACA 59.859 57.895 10.24 0.00 41.41 2.29
3933 3979 1.591863 GGCAAGGTCGCGAGGATAC 60.592 63.158 10.24 0.00 0.00 2.24
3934 3980 0.466739 TAGGCAAGGTCGCGAGGATA 60.467 55.000 10.24 0.00 0.00 2.59
3935 3981 1.327690 TTAGGCAAGGTCGCGAGGAT 61.328 55.000 10.24 0.00 0.00 3.24
3936 3982 1.980232 TTAGGCAAGGTCGCGAGGA 60.980 57.895 10.24 0.00 0.00 3.71
3937 3983 1.810030 GTTAGGCAAGGTCGCGAGG 60.810 63.158 10.24 0.00 0.00 4.63
3938 3984 1.810030 GGTTAGGCAAGGTCGCGAG 60.810 63.158 10.24 0.00 0.00 5.03
3939 3985 2.263540 GGTTAGGCAAGGTCGCGA 59.736 61.111 3.71 3.71 0.00 5.87
3940 3986 3.186047 CGGTTAGGCAAGGTCGCG 61.186 66.667 0.00 0.00 0.00 5.87
3941 3987 0.743345 ATTCGGTTAGGCAAGGTCGC 60.743 55.000 0.00 0.00 0.00 5.19
3942 3988 1.396996 CAATTCGGTTAGGCAAGGTCG 59.603 52.381 0.00 0.00 0.00 4.79
3943 3989 1.132453 GCAATTCGGTTAGGCAAGGTC 59.868 52.381 0.00 0.00 0.00 3.85
3944 3990 1.173913 GCAATTCGGTTAGGCAAGGT 58.826 50.000 0.00 0.00 0.00 3.50
3945 3991 1.463674 AGCAATTCGGTTAGGCAAGG 58.536 50.000 0.00 0.00 0.00 3.61
3946 3992 4.900635 AATAGCAATTCGGTTAGGCAAG 57.099 40.909 0.00 0.00 0.00 4.01
3947 3993 4.702612 TGAAATAGCAATTCGGTTAGGCAA 59.297 37.500 0.00 0.00 0.00 4.52
3948 3994 4.095782 GTGAAATAGCAATTCGGTTAGGCA 59.904 41.667 0.00 0.00 0.00 4.75
3949 3995 4.095782 TGTGAAATAGCAATTCGGTTAGGC 59.904 41.667 0.00 0.00 0.00 3.93
3950 3996 5.811399 TGTGAAATAGCAATTCGGTTAGG 57.189 39.130 0.00 0.00 0.00 2.69
3951 3997 9.438291 CTAAATGTGAAATAGCAATTCGGTTAG 57.562 33.333 0.00 0.00 0.00 2.34
3952 3998 9.168451 TCTAAATGTGAAATAGCAATTCGGTTA 57.832 29.630 0.00 0.00 0.00 2.85
3953 3999 8.050778 TCTAAATGTGAAATAGCAATTCGGTT 57.949 30.769 0.00 0.00 0.00 4.44
3954 4000 7.624360 TCTAAATGTGAAATAGCAATTCGGT 57.376 32.000 0.00 0.00 0.00 4.69
3955 4001 8.131100 ACATCTAAATGTGAAATAGCAATTCGG 58.869 33.333 0.00 0.00 44.51 4.30
3971 4017 7.850982 GTGCGGTAAGTATTTCACATCTAAATG 59.149 37.037 0.00 0.00 38.93 2.32
3972 4018 7.551262 TGTGCGGTAAGTATTTCACATCTAAAT 59.449 33.333 0.00 0.00 30.58 1.40
3973 4019 6.874664 TGTGCGGTAAGTATTTCACATCTAAA 59.125 34.615 0.00 0.00 30.58 1.85
3974 4020 6.399743 TGTGCGGTAAGTATTTCACATCTAA 58.600 36.000 0.00 0.00 30.58 2.10
3975 4021 5.968254 TGTGCGGTAAGTATTTCACATCTA 58.032 37.500 0.00 0.00 30.58 1.98
3976 4022 4.827692 TGTGCGGTAAGTATTTCACATCT 58.172 39.130 0.00 0.00 30.58 2.90
3977 4023 5.734855 ATGTGCGGTAAGTATTTCACATC 57.265 39.130 0.00 0.00 39.98 3.06
3978 4024 5.428253 AGATGTGCGGTAAGTATTTCACAT 58.572 37.500 5.49 5.49 44.71 3.21
3979 4025 4.827692 AGATGTGCGGTAAGTATTTCACA 58.172 39.130 0.00 0.00 38.56 3.58
3980 4026 6.534079 AGTTAGATGTGCGGTAAGTATTTCAC 59.466 38.462 0.00 0.00 0.00 3.18
3981 4027 6.636705 AGTTAGATGTGCGGTAAGTATTTCA 58.363 36.000 0.00 0.00 0.00 2.69
3982 4028 7.277098 TGAAGTTAGATGTGCGGTAAGTATTTC 59.723 37.037 0.00 0.00 0.00 2.17
3983 4029 7.101054 TGAAGTTAGATGTGCGGTAAGTATTT 58.899 34.615 0.00 0.00 0.00 1.40
3984 4030 6.636705 TGAAGTTAGATGTGCGGTAAGTATT 58.363 36.000 0.00 0.00 0.00 1.89
3985 4031 6.096423 TCTGAAGTTAGATGTGCGGTAAGTAT 59.904 38.462 0.00 0.00 0.00 2.12
3986 4032 5.416639 TCTGAAGTTAGATGTGCGGTAAGTA 59.583 40.000 0.00 0.00 0.00 2.24
3987 4033 4.219944 TCTGAAGTTAGATGTGCGGTAAGT 59.780 41.667 0.00 0.00 0.00 2.24
3988 4034 4.744570 TCTGAAGTTAGATGTGCGGTAAG 58.255 43.478 0.00 0.00 0.00 2.34
3989 4035 4.794278 TCTGAAGTTAGATGTGCGGTAA 57.206 40.909 0.00 0.00 0.00 2.85
3990 4036 4.491676 GTTCTGAAGTTAGATGTGCGGTA 58.508 43.478 0.00 0.00 0.00 4.02
3991 4037 3.326747 GTTCTGAAGTTAGATGTGCGGT 58.673 45.455 0.00 0.00 0.00 5.68
3992 4038 2.673368 GGTTCTGAAGTTAGATGTGCGG 59.327 50.000 0.00 0.00 0.00 5.69
3993 4039 3.325870 TGGTTCTGAAGTTAGATGTGCG 58.674 45.455 0.00 0.00 0.00 5.34
3994 4040 5.392380 CCAATGGTTCTGAAGTTAGATGTGC 60.392 44.000 0.00 0.00 0.00 4.57
3995 4041 5.939883 TCCAATGGTTCTGAAGTTAGATGTG 59.060 40.000 0.00 0.00 0.00 3.21
3996 4042 6.126863 TCCAATGGTTCTGAAGTTAGATGT 57.873 37.500 0.00 0.00 0.00 3.06
3997 4043 7.052873 AGATCCAATGGTTCTGAAGTTAGATG 58.947 38.462 11.78 0.00 31.34 2.90
3998 4044 7.205515 AGATCCAATGGTTCTGAAGTTAGAT 57.794 36.000 11.78 0.00 31.34 1.98
3999 4045 6.627087 AGATCCAATGGTTCTGAAGTTAGA 57.373 37.500 11.78 0.00 31.34 2.10
4000 4046 6.656693 ACAAGATCCAATGGTTCTGAAGTTAG 59.343 38.462 13.15 2.14 32.71 2.34
4001 4047 6.430925 CACAAGATCCAATGGTTCTGAAGTTA 59.569 38.462 13.15 0.00 32.71 2.24
4002 4048 5.242393 CACAAGATCCAATGGTTCTGAAGTT 59.758 40.000 13.15 0.00 32.71 2.66
4003 4049 4.763793 CACAAGATCCAATGGTTCTGAAGT 59.236 41.667 13.15 9.72 32.71 3.01
4004 4050 4.763793 ACACAAGATCCAATGGTTCTGAAG 59.236 41.667 13.15 9.18 32.71 3.02
4005 4051 4.520111 CACACAAGATCCAATGGTTCTGAA 59.480 41.667 13.15 0.00 32.71 3.02
4006 4052 4.074259 CACACAAGATCCAATGGTTCTGA 58.926 43.478 13.15 0.00 32.71 3.27
4007 4053 3.822735 ACACACAAGATCCAATGGTTCTG 59.177 43.478 13.15 9.93 32.71 3.02
4008 4054 4.074970 GACACACAAGATCCAATGGTTCT 58.925 43.478 7.03 7.03 33.64 3.01
4009 4055 4.074970 AGACACACAAGATCCAATGGTTC 58.925 43.478 0.00 0.00 0.00 3.62
4010 4056 4.104383 AGACACACAAGATCCAATGGTT 57.896 40.909 0.00 0.00 0.00 3.67
4011 4057 3.795688 AGACACACAAGATCCAATGGT 57.204 42.857 0.00 0.00 0.00 3.55
4012 4058 6.573664 TTAAAGACACACAAGATCCAATGG 57.426 37.500 0.00 0.00 0.00 3.16
4015 4061 8.664798 CGAATATTAAAGACACACAAGATCCAA 58.335 33.333 0.00 0.00 0.00 3.53
4016 4062 7.822334 ACGAATATTAAAGACACACAAGATCCA 59.178 33.333 0.00 0.00 0.00 3.41
4017 4063 8.197988 ACGAATATTAAAGACACACAAGATCC 57.802 34.615 0.00 0.00 0.00 3.36
4020 4066 9.658475 CAAAACGAATATTAAAGACACACAAGA 57.342 29.630 0.00 0.00 0.00 3.02
4021 4067 8.417176 GCAAAACGAATATTAAAGACACACAAG 58.583 33.333 0.00 0.00 0.00 3.16
4022 4068 8.132362 AGCAAAACGAATATTAAAGACACACAA 58.868 29.630 0.00 0.00 0.00 3.33
4023 4069 7.644490 AGCAAAACGAATATTAAAGACACACA 58.356 30.769 0.00 0.00 0.00 3.72
4024 4070 9.601971 TTAGCAAAACGAATATTAAAGACACAC 57.398 29.630 0.00 0.00 0.00 3.82
4027 4073 9.781834 CCATTAGCAAAACGAATATTAAAGACA 57.218 29.630 0.00 0.00 0.00 3.41
4028 4074 9.233232 CCCATTAGCAAAACGAATATTAAAGAC 57.767 33.333 0.00 0.00 0.00 3.01
4029 4075 8.962679 ACCCATTAGCAAAACGAATATTAAAGA 58.037 29.630 0.00 0.00 0.00 2.52
4030 4076 9.233232 GACCCATTAGCAAAACGAATATTAAAG 57.767 33.333 0.00 0.00 0.00 1.85
4031 4077 8.962679 AGACCCATTAGCAAAACGAATATTAAA 58.037 29.630 0.00 0.00 0.00 1.52
4032 4078 8.402472 CAGACCCATTAGCAAAACGAATATTAA 58.598 33.333 0.00 0.00 0.00 1.40
4033 4079 7.554835 ACAGACCCATTAGCAAAACGAATATTA 59.445 33.333 0.00 0.00 0.00 0.98
4034 4080 6.377146 ACAGACCCATTAGCAAAACGAATATT 59.623 34.615 0.00 0.00 0.00 1.28
4035 4081 5.885912 ACAGACCCATTAGCAAAACGAATAT 59.114 36.000 0.00 0.00 0.00 1.28
4036 4082 5.250200 ACAGACCCATTAGCAAAACGAATA 58.750 37.500 0.00 0.00 0.00 1.75
4037 4083 4.079253 ACAGACCCATTAGCAAAACGAAT 58.921 39.130 0.00 0.00 0.00 3.34
4038 4084 3.482436 ACAGACCCATTAGCAAAACGAA 58.518 40.909 0.00 0.00 0.00 3.85
4039 4085 3.071479 GACAGACCCATTAGCAAAACGA 58.929 45.455 0.00 0.00 0.00 3.85
4040 4086 3.074412 AGACAGACCCATTAGCAAAACG 58.926 45.455 0.00 0.00 0.00 3.60
4041 4087 5.488341 TCTAGACAGACCCATTAGCAAAAC 58.512 41.667 0.00 0.00 0.00 2.43
4042 4088 5.755409 TCTAGACAGACCCATTAGCAAAA 57.245 39.130 0.00 0.00 0.00 2.44
4043 4089 5.663106 AGATCTAGACAGACCCATTAGCAAA 59.337 40.000 0.00 0.00 32.25 3.68
4044 4090 5.211973 AGATCTAGACAGACCCATTAGCAA 58.788 41.667 0.00 0.00 32.25 3.91
4045 4091 4.809193 AGATCTAGACAGACCCATTAGCA 58.191 43.478 0.00 0.00 32.25 3.49
4046 4092 4.830046 TGAGATCTAGACAGACCCATTAGC 59.170 45.833 0.00 0.00 32.25 3.09
4103 4149 9.647797 TCGTGCGATCAAATTATATATTAGGTT 57.352 29.630 0.00 0.00 0.00 3.50
4117 4163 4.634000 CGAAGTTAAATCGTGCGATCAAA 58.366 39.130 7.57 3.04 35.64 2.69
4129 4175 1.064060 GCCATGCGAGCGAAGTTAAAT 59.936 47.619 0.00 0.00 0.00 1.40
4140 4187 1.521010 CTGACTCCAGCCATGCGAG 60.521 63.158 0.00 0.00 33.07 5.03
4300 4758 1.028905 ACACCAACGGGACAATGTTG 58.971 50.000 0.00 0.00 43.88 3.33
4591 5060 6.473131 ACATGTTATTCGCATGCAAATTACTG 59.527 34.615 19.57 15.61 45.40 2.74
4688 5157 1.071605 GAGTTGCTTGTCTGGCTACG 58.928 55.000 0.00 0.00 39.58 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.