Multiple sequence alignment - TraesCS7B01G116900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G116900 chr7B 100.000 3410 0 0 1 3410 136364202 136367611 0.000000e+00 6298.0
1 TraesCS7B01G116900 chr7B 91.935 1550 102 9 931 2473 135497933 135496400 0.000000e+00 2148.0
2 TraesCS7B01G116900 chr7B 87.299 1433 175 5 996 2423 136547266 136548696 0.000000e+00 1631.0
3 TraesCS7B01G116900 chr7B 97.159 176 5 0 495 670 136361043 136360868 7.150000e-77 298.0
4 TraesCS7B01G116900 chr7B 85.227 176 21 3 140 312 87188056 87188229 3.500000e-40 176.0
5 TraesCS7B01G116900 chr7B 88.000 125 14 1 191 314 136361349 136361225 2.740000e-31 147.0
6 TraesCS7B01G116900 chr7B 94.643 56 3 0 422 477 87186394 87186339 1.690000e-13 87.9
7 TraesCS7B01G116900 chr7B 94.643 56 3 0 422 477 87186781 87186726 1.690000e-13 87.9
8 TraesCS7B01G116900 chr7B 94.643 56 3 0 422 477 87187614 87187559 1.690000e-13 87.9
9 TraesCS7B01G116900 chr7B 94.643 56 3 0 422 477 87187851 87187796 1.690000e-13 87.9
10 TraesCS7B01G116900 chr7B 100.000 29 0 0 3200 3228 120174180 120174208 2.000000e-03 54.7
11 TraesCS7B01G116900 chr7D 96.338 2294 68 2 904 3193 170286411 170288692 0.000000e+00 3757.0
12 TraesCS7B01G116900 chr7D 87.735 1435 168 4 996 2423 170331902 170333335 0.000000e+00 1668.0
13 TraesCS7B01G116900 chr7D 90.260 1037 77 10 930 1959 169777620 169776601 0.000000e+00 1334.0
14 TraesCS7B01G116900 chr7D 93.473 429 26 2 1960 2387 169774310 169773883 1.330000e-178 636.0
15 TraesCS7B01G116900 chr7D 93.145 248 12 3 422 669 342414112 342414354 3.240000e-95 359.0
16 TraesCS7B01G116900 chr7D 93.305 239 10 3 422 657 342413106 342412871 7.000000e-92 348.0
17 TraesCS7B01G116900 chr7D 94.211 190 8 3 3223 3410 170288688 170288876 1.550000e-73 287.0
18 TraesCS7B01G116900 chr7D 88.750 240 17 5 431 670 588174708 588174937 5.570000e-73 285.0
19 TraesCS7B01G116900 chr7D 93.258 178 8 4 671 845 170286086 170286262 3.380000e-65 259.0
20 TraesCS7B01G116900 chr7A 91.176 2074 120 42 671 2720 173264176 173266210 0.000000e+00 2758.0
21 TraesCS7B01G116900 chr7A 86.620 1435 184 4 996 2423 173408815 173410248 0.000000e+00 1580.0
22 TraesCS7B01G116900 chr7A 89.158 1116 88 10 931 2038 172383950 172382860 0.000000e+00 1360.0
23 TraesCS7B01G116900 chr7A 87.326 718 66 16 671 1367 173237660 173238373 0.000000e+00 798.0
24 TraesCS7B01G116900 chr7A 93.103 145 7 2 671 813 173235689 173235832 3.450000e-50 209.0
25 TraesCS7B01G116900 chr7A 93.636 110 5 2 2722 2830 173266731 173266839 2.720000e-36 163.0
26 TraesCS7B01G116900 chr3A 91.667 240 14 6 431 669 745478683 745478917 9.120000e-86 327.0
27 TraesCS7B01G116900 chr1A 89.474 247 15 6 431 670 579103221 579103463 5.530000e-78 302.0
28 TraesCS7B01G116900 chr1A 97.143 35 1 0 2049 2083 42217791 42217757 3.670000e-05 60.2
29 TraesCS7B01G116900 chr1D 88.750 240 16 6 431 670 275718882 275719110 2.000000e-72 283.0
30 TraesCS7B01G116900 chr1D 86.061 165 21 2 3248 3410 14195920 14195756 3.500000e-40 176.0
31 TraesCS7B01G116900 chr1D 100.000 28 0 0 3200 3227 116238482 116238509 6.000000e-03 52.8
32 TraesCS7B01G116900 chr6B 92.118 203 11 1 467 669 154821882 154821685 7.200000e-72 281.0
33 TraesCS7B01G116900 chr6B 94.944 178 7 2 495 670 154824303 154824480 9.320000e-71 278.0
34 TraesCS7B01G116900 chr6B 100.000 32 0 0 422 453 154824271 154824302 3.670000e-05 60.2
35 TraesCS7B01G116900 chr6B 100.000 30 0 0 3200 3229 33527954 33527925 4.750000e-04 56.5
36 TraesCS7B01G116900 chr5D 89.202 213 23 0 1406 1618 382036981 382036769 2.020000e-67 267.0
37 TraesCS7B01G116900 chr4B 88.387 155 12 3 3258 3410 421921751 421921601 7.520000e-42 182.0
38 TraesCS7B01G116900 chrUn 89.041 146 14 1 3048 3193 108953049 108952906 2.700000e-41 180.0
39 TraesCS7B01G116900 chrUn 100.000 28 0 0 3200 3227 86351749 86351776 6.000000e-03 52.8
40 TraesCS7B01G116900 chr4D 89.011 91 7 2 436 526 177954038 177954125 3.600000e-20 110.0
41 TraesCS7B01G116900 chr6A 89.796 49 3 2 2053 2100 506522822 506522869 1.020000e-05 62.1
42 TraesCS7B01G116900 chr4A 100.000 29 0 0 3200 3228 570913714 570913742 2.000000e-03 54.7
43 TraesCS7B01G116900 chr4A 100.000 29 0 0 3200 3228 613157188 613157160 2.000000e-03 54.7
44 TraesCS7B01G116900 chr2A 100.000 29 0 0 3200 3228 63157301 63157273 2.000000e-03 54.7
45 TraesCS7B01G116900 chr1B 100.000 29 0 0 3200 3228 172000137 172000109 2.000000e-03 54.7
46 TraesCS7B01G116900 chr6D 94.118 34 2 0 3200 3233 451080645 451080612 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G116900 chr7B 136364202 136367611 3409 False 6298.000000 6298 100.000000 1 3410 1 chr7B.!!$F3 3409
1 TraesCS7B01G116900 chr7B 135496400 135497933 1533 True 2148.000000 2148 91.935000 931 2473 1 chr7B.!!$R1 1542
2 TraesCS7B01G116900 chr7B 136547266 136548696 1430 False 1631.000000 1631 87.299000 996 2423 1 chr7B.!!$F4 1427
3 TraesCS7B01G116900 chr7D 170331902 170333335 1433 False 1668.000000 1668 87.735000 996 2423 1 chr7D.!!$F1 1427
4 TraesCS7B01G116900 chr7D 170286086 170288876 2790 False 1434.333333 3757 94.602333 671 3410 3 chr7D.!!$F4 2739
5 TraesCS7B01G116900 chr7D 169773883 169777620 3737 True 985.000000 1334 91.866500 930 2387 2 chr7D.!!$R2 1457
6 TraesCS7B01G116900 chr7A 173408815 173410248 1433 False 1580.000000 1580 86.620000 996 2423 1 chr7A.!!$F1 1427
7 TraesCS7B01G116900 chr7A 173264176 173266839 2663 False 1460.500000 2758 92.406000 671 2830 2 chr7A.!!$F3 2159
8 TraesCS7B01G116900 chr7A 172382860 172383950 1090 True 1360.000000 1360 89.158000 931 2038 1 chr7A.!!$R1 1107
9 TraesCS7B01G116900 chr7A 173235689 173238373 2684 False 503.500000 798 90.214500 671 1367 2 chr7A.!!$F2 696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
528 529 0.032813 AATGGGCTGTTCATGGGAGG 60.033 55.0 0.00 0.00 0.00 4.30 F
562 563 0.040067 CTGCAAGGCCTTTGAACGTC 60.040 55.0 17.61 1.51 39.21 4.34 F
589 590 0.107831 TTCTTGGTCTGTTCCACCGG 59.892 55.0 0.00 0.00 37.20 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2242 6680 0.036010 ATCAACTCCCTCGCCAACAG 60.036 55.000 0.00 0.00 0.0 3.16 R
2396 6834 8.711457 GCAATGATTATATTTAACCACCATTGC 58.289 33.333 16.76 16.76 41.6 3.56 R
2831 7795 5.291371 GCGAGACTCCTAATGTTTTTACCTC 59.709 44.000 0.00 0.00 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.671682 GGCCACACCTTCTCCTCC 59.328 66.667 0.00 0.00 34.51 4.30
26 27 1.920835 GGCCACACCTTCTCCTCCT 60.921 63.158 0.00 0.00 34.51 3.69
27 28 1.599576 GCCACACCTTCTCCTCCTC 59.400 63.158 0.00 0.00 0.00 3.71
28 29 1.904990 GCCACACCTTCTCCTCCTCC 61.905 65.000 0.00 0.00 0.00 4.30
29 30 0.545309 CCACACCTTCTCCTCCTCCA 60.545 60.000 0.00 0.00 0.00 3.86
30 31 0.901124 CACACCTTCTCCTCCTCCAG 59.099 60.000 0.00 0.00 0.00 3.86
31 32 0.907230 ACACCTTCTCCTCCTCCAGC 60.907 60.000 0.00 0.00 0.00 4.85
32 33 0.906756 CACCTTCTCCTCCTCCAGCA 60.907 60.000 0.00 0.00 0.00 4.41
33 34 0.178891 ACCTTCTCCTCCTCCAGCAA 60.179 55.000 0.00 0.00 0.00 3.91
34 35 0.251634 CCTTCTCCTCCTCCAGCAAC 59.748 60.000 0.00 0.00 0.00 4.17
35 36 0.979665 CTTCTCCTCCTCCAGCAACA 59.020 55.000 0.00 0.00 0.00 3.33
36 37 0.979665 TTCTCCTCCTCCAGCAACAG 59.020 55.000 0.00 0.00 0.00 3.16
37 38 0.178921 TCTCCTCCTCCAGCAACAGT 60.179 55.000 0.00 0.00 0.00 3.55
38 39 0.036577 CTCCTCCTCCAGCAACAGTG 60.037 60.000 0.00 0.00 0.00 3.66
63 64 4.351938 CGGCGGGACAGTCAACGA 62.352 66.667 17.98 0.00 0.00 3.85
64 65 2.029964 GGCGGGACAGTCAACGAA 59.970 61.111 17.98 0.00 0.00 3.85
65 66 2.027625 GGCGGGACAGTCAACGAAG 61.028 63.158 17.98 0.00 0.00 3.79
66 67 2.027625 GCGGGACAGTCAACGAAGG 61.028 63.158 17.98 0.00 0.00 3.46
67 68 1.663739 CGGGACAGTCAACGAAGGA 59.336 57.895 10.46 0.00 0.00 3.36
68 69 0.388649 CGGGACAGTCAACGAAGGAG 60.389 60.000 10.46 0.00 0.00 3.69
69 70 0.037232 GGGACAGTCAACGAAGGAGG 60.037 60.000 2.17 0.00 0.00 4.30
70 71 0.966920 GGACAGTCAACGAAGGAGGA 59.033 55.000 2.17 0.00 0.00 3.71
71 72 1.067495 GGACAGTCAACGAAGGAGGAG 60.067 57.143 2.17 0.00 0.00 3.69
72 73 0.969894 ACAGTCAACGAAGGAGGAGG 59.030 55.000 0.00 0.00 0.00 4.30
73 74 0.390472 CAGTCAACGAAGGAGGAGGC 60.390 60.000 0.00 0.00 0.00 4.70
74 75 1.446272 GTCAACGAAGGAGGAGGCG 60.446 63.158 0.00 0.00 0.00 5.52
75 76 2.815647 CAACGAAGGAGGAGGCGC 60.816 66.667 0.00 0.00 0.00 6.53
76 77 4.436998 AACGAAGGAGGAGGCGCG 62.437 66.667 0.00 0.00 0.00 6.86
97 98 4.699522 GGCGTGGGAGAGCGGTTT 62.700 66.667 0.00 0.00 0.00 3.27
98 99 3.119096 GCGTGGGAGAGCGGTTTC 61.119 66.667 0.00 0.00 0.00 2.78
99 100 2.342279 CGTGGGAGAGCGGTTTCA 59.658 61.111 7.50 0.00 0.00 2.69
100 101 1.079127 CGTGGGAGAGCGGTTTCAT 60.079 57.895 7.50 0.00 0.00 2.57
101 102 1.084370 CGTGGGAGAGCGGTTTCATC 61.084 60.000 7.50 0.00 0.00 2.92
102 103 0.250513 GTGGGAGAGCGGTTTCATCT 59.749 55.000 7.50 0.00 0.00 2.90
103 104 0.250234 TGGGAGAGCGGTTTCATCTG 59.750 55.000 7.50 0.00 0.00 2.90
104 105 0.462759 GGGAGAGCGGTTTCATCTGG 60.463 60.000 7.50 0.00 0.00 3.86
105 106 1.092345 GGAGAGCGGTTTCATCTGGC 61.092 60.000 7.50 0.00 0.00 4.85
106 107 0.107945 GAGAGCGGTTTCATCTGGCT 60.108 55.000 0.00 0.00 36.51 4.75
107 108 0.326264 AGAGCGGTTTCATCTGGCTT 59.674 50.000 0.00 0.00 33.40 4.35
108 109 0.449388 GAGCGGTTTCATCTGGCTTG 59.551 55.000 0.00 0.00 33.40 4.01
109 110 0.962356 AGCGGTTTCATCTGGCTTGG 60.962 55.000 0.00 0.00 0.00 3.61
110 111 1.937546 GCGGTTTCATCTGGCTTGGG 61.938 60.000 0.00 0.00 0.00 4.12
111 112 1.893062 GGTTTCATCTGGCTTGGGC 59.107 57.895 0.00 0.00 37.82 5.36
112 113 0.613012 GGTTTCATCTGGCTTGGGCT 60.613 55.000 0.00 0.00 38.73 5.19
113 114 0.529378 GTTTCATCTGGCTTGGGCTG 59.471 55.000 0.00 0.00 38.73 4.85
114 115 0.612732 TTTCATCTGGCTTGGGCTGG 60.613 55.000 0.00 0.00 38.73 4.85
115 116 2.441532 CATCTGGCTTGGGCTGGG 60.442 66.667 0.00 0.00 38.73 4.45
116 117 3.747579 ATCTGGCTTGGGCTGGGG 61.748 66.667 0.00 0.00 38.73 4.96
140 141 2.202756 GTCATCGACCTCACCGGC 60.203 66.667 0.00 0.00 35.61 6.13
141 142 3.458163 TCATCGACCTCACCGGCC 61.458 66.667 0.00 0.00 35.61 6.13
142 143 3.461773 CATCGACCTCACCGGCCT 61.462 66.667 0.00 0.00 35.61 5.19
143 144 3.148279 ATCGACCTCACCGGCCTC 61.148 66.667 0.00 0.00 35.61 4.70
192 193 3.645975 CGCCGACCGTGCAAGTTT 61.646 61.111 0.00 0.00 0.00 2.66
193 194 2.719354 GCCGACCGTGCAAGTTTT 59.281 55.556 0.00 0.00 0.00 2.43
194 195 1.065109 GCCGACCGTGCAAGTTTTT 59.935 52.632 0.00 0.00 0.00 1.94
229 230 9.902196 ATTAATGTTTAAGTAAACTTTGGTCGG 57.098 29.630 18.30 0.00 44.36 4.79
230 231 5.172460 TGTTTAAGTAAACTTTGGTCGGC 57.828 39.130 13.55 0.00 44.36 5.54
231 232 4.213674 GTTTAAGTAAACTTTGGTCGGCG 58.786 43.478 0.00 0.00 41.65 6.46
232 233 1.232119 AAGTAAACTTTGGTCGGCGG 58.768 50.000 7.21 0.00 30.82 6.13
233 234 0.107268 AGTAAACTTTGGTCGGCGGT 59.893 50.000 7.21 0.00 0.00 5.68
234 235 0.946528 GTAAACTTTGGTCGGCGGTT 59.053 50.000 7.21 0.00 0.00 4.44
235 236 0.945813 TAAACTTTGGTCGGCGGTTG 59.054 50.000 7.21 0.00 0.00 3.77
236 237 0.748729 AAACTTTGGTCGGCGGTTGA 60.749 50.000 7.21 0.00 0.00 3.18
237 238 0.536460 AACTTTGGTCGGCGGTTGAT 60.536 50.000 7.21 0.00 0.00 2.57
238 239 0.953960 ACTTTGGTCGGCGGTTGATC 60.954 55.000 7.21 0.00 0.00 2.92
239 240 1.966493 CTTTGGTCGGCGGTTGATCG 61.966 60.000 7.21 0.00 0.00 3.69
240 241 2.437518 TTTGGTCGGCGGTTGATCGA 62.438 55.000 7.21 0.00 0.00 3.59
242 243 2.884207 GTCGGCGGTTGATCGACC 60.884 66.667 20.91 20.91 44.96 4.79
243 244 3.375239 TCGGCGGTTGATCGACCA 61.375 61.111 28.18 9.14 39.78 4.02
244 245 2.202878 CGGCGGTTGATCGACCAT 60.203 61.111 28.18 0.00 39.78 3.55
245 246 1.813753 CGGCGGTTGATCGACCATT 60.814 57.895 28.18 0.00 39.78 3.16
246 247 1.366111 CGGCGGTTGATCGACCATTT 61.366 55.000 28.18 0.00 39.78 2.32
247 248 1.658994 GGCGGTTGATCGACCATTTA 58.341 50.000 28.18 0.00 39.78 1.40
248 249 2.011222 GGCGGTTGATCGACCATTTAA 58.989 47.619 28.18 0.00 39.78 1.52
249 250 2.616842 GGCGGTTGATCGACCATTTAAT 59.383 45.455 28.18 0.00 39.78 1.40
250 251 3.810941 GGCGGTTGATCGACCATTTAATA 59.189 43.478 28.18 0.00 39.78 0.98
251 252 4.454504 GGCGGTTGATCGACCATTTAATAT 59.545 41.667 28.18 0.00 39.78 1.28
252 253 5.048991 GGCGGTTGATCGACCATTTAATATT 60.049 40.000 28.18 0.00 39.78 1.28
253 254 6.435428 GCGGTTGATCGACCATTTAATATTT 58.565 36.000 28.18 0.00 39.78 1.40
254 255 7.308109 GGCGGTTGATCGACCATTTAATATTTA 60.308 37.037 28.18 0.00 39.78 1.40
255 256 8.071368 GCGGTTGATCGACCATTTAATATTTAA 58.929 33.333 28.18 0.00 39.78 1.52
275 276 7.728580 TTTAATTAAGTTTATTTCGGCTGCG 57.271 32.000 0.00 0.00 0.00 5.18
276 277 4.957759 ATTAAGTTTATTTCGGCTGCGT 57.042 36.364 0.00 0.00 0.00 5.24
277 278 2.611974 AAGTTTATTTCGGCTGCGTG 57.388 45.000 0.00 0.00 0.00 5.34
278 279 1.519408 AGTTTATTTCGGCTGCGTGT 58.481 45.000 0.00 0.00 0.00 4.49
279 280 1.877443 AGTTTATTTCGGCTGCGTGTT 59.123 42.857 0.00 0.00 0.00 3.32
280 281 2.292292 AGTTTATTTCGGCTGCGTGTTT 59.708 40.909 0.00 0.00 0.00 2.83
281 282 3.047093 GTTTATTTCGGCTGCGTGTTTT 58.953 40.909 0.00 0.00 0.00 2.43
282 283 3.357166 TTATTTCGGCTGCGTGTTTTT 57.643 38.095 0.00 0.00 0.00 1.94
305 306 8.844441 TTTTAAATATATTTTCTTGACGCGGG 57.156 30.769 15.64 0.00 0.00 6.13
306 307 7.789273 TTAAATATATTTTCTTGACGCGGGA 57.211 32.000 15.64 0.00 0.00 5.14
307 308 6.687081 AAATATATTTTCTTGACGCGGGAA 57.313 33.333 12.47 6.52 0.00 3.97
308 309 6.687081 AATATATTTTCTTGACGCGGGAAA 57.313 33.333 12.47 12.33 0.00 3.13
309 310 6.687081 ATATATTTTCTTGACGCGGGAAAA 57.313 33.333 22.78 22.78 41.21 2.29
310 311 3.934457 ATTTTCTTGACGCGGGAAAAT 57.066 38.095 24.25 24.25 41.70 1.82
311 312 3.719173 TTTTCTTGACGCGGGAAAATT 57.281 38.095 12.47 0.00 35.10 1.82
312 313 3.719173 TTTCTTGACGCGGGAAAATTT 57.281 38.095 12.47 0.00 0.00 1.82
313 314 2.697431 TCTTGACGCGGGAAAATTTG 57.303 45.000 12.47 0.00 0.00 2.32
314 315 2.222886 TCTTGACGCGGGAAAATTTGA 58.777 42.857 12.47 0.00 0.00 2.69
315 316 2.817258 TCTTGACGCGGGAAAATTTGAT 59.183 40.909 12.47 0.00 0.00 2.57
316 317 2.627863 TGACGCGGGAAAATTTGATG 57.372 45.000 12.47 0.00 0.00 3.07
317 318 1.201181 TGACGCGGGAAAATTTGATGG 59.799 47.619 12.47 0.00 0.00 3.51
318 319 1.470890 GACGCGGGAAAATTTGATGGA 59.529 47.619 12.47 0.00 0.00 3.41
319 320 1.201414 ACGCGGGAAAATTTGATGGAC 59.799 47.619 12.47 0.00 0.00 4.02
320 321 1.201181 CGCGGGAAAATTTGATGGACA 59.799 47.619 0.00 0.00 0.00 4.02
321 322 2.352225 CGCGGGAAAATTTGATGGACAA 60.352 45.455 0.00 0.00 36.65 3.18
329 330 1.695813 TTTGATGGACAAAATGCGCG 58.304 45.000 0.00 0.00 44.16 6.86
330 331 0.595588 TTGATGGACAAAATGCGCGT 59.404 45.000 8.43 0.00 35.39 6.01
331 332 0.595588 TGATGGACAAAATGCGCGTT 59.404 45.000 9.57 9.57 0.00 4.84
332 333 1.259316 GATGGACAAAATGCGCGTTC 58.741 50.000 16.53 2.54 0.00 3.95
333 334 0.454285 ATGGACAAAATGCGCGTTCG 60.454 50.000 16.53 12.43 39.07 3.95
334 335 1.082366 GGACAAAATGCGCGTTCGT 60.082 52.632 16.53 15.68 38.14 3.85
335 336 0.659123 GGACAAAATGCGCGTTCGTT 60.659 50.000 16.53 4.22 38.14 3.85
336 337 0.425656 GACAAAATGCGCGTTCGTTG 59.574 50.000 16.53 18.71 38.14 4.10
337 338 0.932585 ACAAAATGCGCGTTCGTTGG 60.933 50.000 23.62 8.20 38.14 3.77
338 339 0.658829 CAAAATGCGCGTTCGTTGGA 60.659 50.000 16.53 0.00 38.14 3.53
339 340 0.385473 AAAATGCGCGTTCGTTGGAG 60.385 50.000 16.53 0.00 38.14 3.86
340 341 1.503818 AAATGCGCGTTCGTTGGAGT 61.504 50.000 16.53 0.00 38.14 3.85
341 342 1.897398 AATGCGCGTTCGTTGGAGTC 61.897 55.000 9.57 0.00 38.14 3.36
342 343 3.033764 GCGCGTTCGTTGGAGTCA 61.034 61.111 8.43 0.00 38.14 3.41
343 344 2.380410 GCGCGTTCGTTGGAGTCAT 61.380 57.895 8.43 0.00 38.14 3.06
344 345 1.702299 CGCGTTCGTTGGAGTCATC 59.298 57.895 0.00 0.00 0.00 2.92
345 346 1.702299 GCGTTCGTTGGAGTCATCG 59.298 57.895 0.00 0.00 37.42 3.84
346 347 1.702299 CGTTCGTTGGAGTCATCGC 59.298 57.895 0.00 0.00 36.39 4.58
347 348 1.702299 GTTCGTTGGAGTCATCGCG 59.298 57.895 0.00 0.00 36.39 5.87
348 349 1.007336 GTTCGTTGGAGTCATCGCGT 61.007 55.000 5.77 0.00 36.39 6.01
349 350 0.319211 TTCGTTGGAGTCATCGCGTT 60.319 50.000 5.77 0.00 36.39 4.84
350 351 1.006825 TCGTTGGAGTCATCGCGTTG 61.007 55.000 10.93 10.93 36.39 4.10
351 352 1.787847 GTTGGAGTCATCGCGTTGG 59.212 57.895 16.60 2.84 0.00 3.77
352 353 2.032634 TTGGAGTCATCGCGTTGGC 61.033 57.895 13.72 13.72 0.00 4.52
363 364 3.084579 CGTTGGCGCTGCTCTAAG 58.915 61.111 7.64 0.00 0.00 2.18
364 365 1.738099 CGTTGGCGCTGCTCTAAGT 60.738 57.895 7.64 0.00 0.00 2.24
365 366 1.291877 CGTTGGCGCTGCTCTAAGTT 61.292 55.000 7.64 0.00 0.00 2.66
366 367 0.444260 GTTGGCGCTGCTCTAAGTTC 59.556 55.000 7.64 0.00 0.00 3.01
367 368 0.321671 TTGGCGCTGCTCTAAGTTCT 59.678 50.000 7.64 0.00 0.00 3.01
368 369 0.108615 TGGCGCTGCTCTAAGTTCTC 60.109 55.000 7.64 0.00 0.00 2.87
369 370 0.174617 GGCGCTGCTCTAAGTTCTCT 59.825 55.000 7.64 0.00 0.00 3.10
370 371 1.405821 GGCGCTGCTCTAAGTTCTCTA 59.594 52.381 7.64 0.00 0.00 2.43
371 372 2.542824 GGCGCTGCTCTAAGTTCTCTAG 60.543 54.545 7.64 0.00 0.00 2.43
372 373 2.098443 GCGCTGCTCTAAGTTCTCTAGT 59.902 50.000 0.00 0.00 0.00 2.57
373 374 3.790789 GCGCTGCTCTAAGTTCTCTAGTC 60.791 52.174 0.00 0.00 0.00 2.59
374 375 3.625764 CGCTGCTCTAAGTTCTCTAGTCT 59.374 47.826 0.00 0.00 0.00 3.24
375 376 4.095782 CGCTGCTCTAAGTTCTCTAGTCTT 59.904 45.833 0.00 0.00 0.00 3.01
376 377 5.392595 CGCTGCTCTAAGTTCTCTAGTCTTT 60.393 44.000 0.00 0.00 0.00 2.52
377 378 6.394809 GCTGCTCTAAGTTCTCTAGTCTTTT 58.605 40.000 0.00 0.00 0.00 2.27
378 379 6.871492 GCTGCTCTAAGTTCTCTAGTCTTTTT 59.129 38.462 0.00 0.00 0.00 1.94
437 438 9.971744 TTGCATCGAATTTTGATCATATATACG 57.028 29.630 0.00 0.00 0.00 3.06
438 439 9.364989 TGCATCGAATTTTGATCATATATACGA 57.635 29.630 0.00 5.16 0.00 3.43
450 451 9.529823 TGATCATATATACGAAAGTTCCCTAGT 57.470 33.333 0.00 0.00 46.40 2.57
452 453 8.929260 TCATATATACGAAAGTTCCCTAGTCA 57.071 34.615 0.00 0.00 46.40 3.41
453 454 9.358406 TCATATATACGAAAGTTCCCTAGTCAA 57.642 33.333 0.00 0.00 46.40 3.18
454 455 9.408069 CATATATACGAAAGTTCCCTAGTCAAC 57.592 37.037 0.00 0.00 46.40 3.18
455 456 3.022607 ACGAAAGTTCCCTAGTCAACG 57.977 47.619 0.00 0.00 46.40 4.10
456 457 2.363359 ACGAAAGTTCCCTAGTCAACGT 59.637 45.455 0.00 0.00 46.40 3.99
457 458 2.729882 CGAAAGTTCCCTAGTCAACGTG 59.270 50.000 0.00 0.00 0.00 4.49
458 459 3.725490 GAAAGTTCCCTAGTCAACGTGT 58.275 45.455 0.00 0.00 0.00 4.49
459 460 3.832615 AAGTTCCCTAGTCAACGTGTT 57.167 42.857 0.00 0.00 0.00 3.32
460 461 3.107642 AGTTCCCTAGTCAACGTGTTG 57.892 47.619 6.39 6.39 41.71 3.33
461 462 2.140717 GTTCCCTAGTCAACGTGTTGG 58.859 52.381 12.43 0.00 40.78 3.77
462 463 0.034337 TCCCTAGTCAACGTGTTGGC 59.966 55.000 9.23 9.23 44.94 4.52
463 464 0.250124 CCCTAGTCAACGTGTTGGCA 60.250 55.000 18.46 5.03 46.84 4.92
464 465 1.148310 CCTAGTCAACGTGTTGGCAG 58.852 55.000 18.46 12.91 46.84 4.85
465 466 0.512952 CTAGTCAACGTGTTGGCAGC 59.487 55.000 18.46 0.00 46.84 5.25
466 467 1.218875 TAGTCAACGTGTTGGCAGCG 61.219 55.000 18.46 1.85 46.84 5.18
467 468 3.276091 TCAACGTGTTGGCAGCGG 61.276 61.111 12.43 2.58 40.78 5.52
468 469 4.980903 CAACGTGTTGGCAGCGGC 62.981 66.667 0.00 0.00 36.95 6.53
481 482 2.357517 GCGGCAGCGGCAGTATAT 60.358 61.111 19.49 0.00 43.71 0.86
482 483 1.080093 GCGGCAGCGGCAGTATATA 60.080 57.895 19.49 0.00 43.71 0.86
483 484 1.352156 GCGGCAGCGGCAGTATATAC 61.352 60.000 19.49 4.60 43.71 1.47
484 485 1.071019 CGGCAGCGGCAGTATATACG 61.071 60.000 11.88 0.00 43.71 3.06
491 492 2.739292 CGGCAGTATATACGCTGTTGT 58.261 47.619 20.82 0.00 35.33 3.32
492 493 3.120792 CGGCAGTATATACGCTGTTGTT 58.879 45.455 20.82 0.00 35.33 2.83
493 494 3.060540 CGGCAGTATATACGCTGTTGTTG 60.061 47.826 20.82 9.14 35.33 3.33
494 495 3.869246 GGCAGTATATACGCTGTTGTTGT 59.131 43.478 20.95 0.00 35.33 3.32
495 496 4.331717 GGCAGTATATACGCTGTTGTTGTT 59.668 41.667 20.95 0.00 35.33 2.83
496 497 5.163794 GGCAGTATATACGCTGTTGTTGTTT 60.164 40.000 20.95 0.00 35.33 2.83
497 498 6.311723 GCAGTATATACGCTGTTGTTGTTTT 58.688 36.000 17.07 0.00 35.33 2.43
498 499 6.799925 GCAGTATATACGCTGTTGTTGTTTTT 59.200 34.615 17.07 0.00 35.33 1.94
515 516 1.923356 TTTTCCTGAGGTGAATGGGC 58.077 50.000 0.00 0.00 0.00 5.36
516 517 1.075601 TTTCCTGAGGTGAATGGGCT 58.924 50.000 0.00 0.00 0.00 5.19
517 518 0.329261 TTCCTGAGGTGAATGGGCTG 59.671 55.000 0.00 0.00 0.00 4.85
518 519 0.842030 TCCTGAGGTGAATGGGCTGT 60.842 55.000 0.00 0.00 0.00 4.40
519 520 0.038744 CCTGAGGTGAATGGGCTGTT 59.961 55.000 0.00 0.00 0.00 3.16
520 521 1.457346 CTGAGGTGAATGGGCTGTTC 58.543 55.000 0.00 0.00 0.00 3.18
521 522 0.770499 TGAGGTGAATGGGCTGTTCA 59.230 50.000 1.87 1.87 33.46 3.18
522 523 1.355381 TGAGGTGAATGGGCTGTTCAT 59.645 47.619 8.01 0.00 37.84 2.57
523 524 1.747355 GAGGTGAATGGGCTGTTCATG 59.253 52.381 8.01 0.00 37.84 3.07
524 525 0.819582 GGTGAATGGGCTGTTCATGG 59.180 55.000 8.01 0.00 37.84 3.66
525 526 0.819582 GTGAATGGGCTGTTCATGGG 59.180 55.000 8.01 0.00 37.84 4.00
526 527 0.703488 TGAATGGGCTGTTCATGGGA 59.297 50.000 0.00 0.00 31.07 4.37
527 528 1.341285 TGAATGGGCTGTTCATGGGAG 60.341 52.381 0.00 0.00 31.07 4.30
528 529 0.032813 AATGGGCTGTTCATGGGAGG 60.033 55.000 0.00 0.00 0.00 4.30
529 530 0.920763 ATGGGCTGTTCATGGGAGGA 60.921 55.000 0.00 0.00 0.00 3.71
530 531 0.920763 TGGGCTGTTCATGGGAGGAT 60.921 55.000 0.00 0.00 0.00 3.24
531 532 0.259938 GGGCTGTTCATGGGAGGATT 59.740 55.000 0.00 0.00 0.00 3.01
532 533 1.342374 GGGCTGTTCATGGGAGGATTT 60.342 52.381 0.00 0.00 0.00 2.17
533 534 2.027385 GGCTGTTCATGGGAGGATTTC 58.973 52.381 0.00 0.00 0.00 2.17
534 535 1.672881 GCTGTTCATGGGAGGATTTCG 59.327 52.381 0.00 0.00 0.00 3.46
535 536 1.672881 CTGTTCATGGGAGGATTTCGC 59.327 52.381 0.00 0.00 39.11 4.70
536 537 1.281867 TGTTCATGGGAGGATTTCGCT 59.718 47.619 0.00 0.00 39.38 4.93
537 538 1.943340 GTTCATGGGAGGATTTCGCTC 59.057 52.381 0.00 0.00 39.38 5.03
538 539 0.104855 TCATGGGAGGATTTCGCTCG 59.895 55.000 0.00 0.00 39.38 5.03
539 540 0.179073 CATGGGAGGATTTCGCTCGT 60.179 55.000 0.00 0.00 39.38 4.18
540 541 0.179073 ATGGGAGGATTTCGCTCGTG 60.179 55.000 0.00 0.00 39.38 4.35
541 542 1.521681 GGGAGGATTTCGCTCGTGG 60.522 63.158 0.00 0.00 35.94 4.94
542 543 1.521681 GGAGGATTTCGCTCGTGGG 60.522 63.158 0.00 0.00 0.00 4.61
543 544 2.125106 AGGATTTCGCTCGTGGGC 60.125 61.111 0.00 0.00 0.00 5.36
544 545 2.125106 GGATTTCGCTCGTGGGCT 60.125 61.111 0.00 0.00 0.00 5.19
545 546 2.464459 GGATTTCGCTCGTGGGCTG 61.464 63.158 0.00 0.00 0.00 4.85
546 547 3.100862 GATTTCGCTCGTGGGCTGC 62.101 63.158 0.00 0.00 0.00 5.25
547 548 3.899981 ATTTCGCTCGTGGGCTGCA 62.900 57.895 0.50 0.00 0.00 4.41
548 549 4.617520 TTCGCTCGTGGGCTGCAA 62.618 61.111 0.50 0.00 0.00 4.08
559 560 4.661461 GCTGCAAGGCCTTTGAAC 57.339 55.556 17.61 6.44 39.21 3.18
560 561 1.372128 GCTGCAAGGCCTTTGAACG 60.372 57.895 17.61 5.17 39.21 3.95
561 562 2.032981 CTGCAAGGCCTTTGAACGT 58.967 52.632 17.61 0.00 39.21 3.99
562 563 0.040067 CTGCAAGGCCTTTGAACGTC 60.040 55.000 17.61 1.51 39.21 4.34
563 564 1.082104 GCAAGGCCTTTGAACGTCG 60.082 57.895 17.61 2.64 39.21 5.12
564 565 1.503818 GCAAGGCCTTTGAACGTCGA 61.504 55.000 17.61 0.00 39.21 4.20
565 566 0.512952 CAAGGCCTTTGAACGTCGAG 59.487 55.000 17.61 0.00 39.21 4.04
566 567 1.228657 AAGGCCTTTGAACGTCGAGC 61.229 55.000 13.78 0.00 0.00 5.03
568 569 2.470286 CCTTTGAACGTCGAGCGC 59.530 61.111 0.00 0.00 46.11 5.92
569 570 2.022129 CCTTTGAACGTCGAGCGCT 61.022 57.895 11.27 11.27 46.11 5.92
570 571 1.557443 CCTTTGAACGTCGAGCGCTT 61.557 55.000 13.26 0.00 46.11 4.68
571 572 0.232303 CTTTGAACGTCGAGCGCTTT 59.768 50.000 13.26 0.00 46.11 3.51
572 573 0.231279 TTTGAACGTCGAGCGCTTTC 59.769 50.000 13.26 11.89 46.11 2.62
573 574 0.596600 TTGAACGTCGAGCGCTTTCT 60.597 50.000 13.26 0.00 46.11 2.52
574 575 0.596600 TGAACGTCGAGCGCTTTCTT 60.597 50.000 13.26 0.00 46.11 2.52
575 576 0.179272 GAACGTCGAGCGCTTTCTTG 60.179 55.000 13.26 3.50 46.11 3.02
576 577 1.557443 AACGTCGAGCGCTTTCTTGG 61.557 55.000 13.26 1.66 46.11 3.61
577 578 2.022129 CGTCGAGCGCTTTCTTGGT 61.022 57.895 13.26 0.00 0.00 3.67
578 579 1.782181 GTCGAGCGCTTTCTTGGTC 59.218 57.895 13.26 0.00 0.00 4.02
579 580 0.667792 GTCGAGCGCTTTCTTGGTCT 60.668 55.000 13.26 0.00 0.00 3.85
580 581 0.667487 TCGAGCGCTTTCTTGGTCTG 60.667 55.000 13.26 0.00 0.00 3.51
581 582 0.946221 CGAGCGCTTTCTTGGTCTGT 60.946 55.000 13.26 0.00 0.00 3.41
582 583 1.230324 GAGCGCTTTCTTGGTCTGTT 58.770 50.000 13.26 0.00 0.00 3.16
583 584 1.195674 GAGCGCTTTCTTGGTCTGTTC 59.804 52.381 13.26 0.00 0.00 3.18
584 585 0.238553 GCGCTTTCTTGGTCTGTTCC 59.761 55.000 0.00 0.00 0.00 3.62
585 586 1.593196 CGCTTTCTTGGTCTGTTCCA 58.407 50.000 0.00 0.00 35.49 3.53
586 587 1.264288 CGCTTTCTTGGTCTGTTCCAC 59.736 52.381 0.00 0.00 37.20 4.02
587 588 1.609072 GCTTTCTTGGTCTGTTCCACC 59.391 52.381 0.00 0.00 37.20 4.61
588 589 1.873591 CTTTCTTGGTCTGTTCCACCG 59.126 52.381 0.00 0.00 37.20 4.94
589 590 0.107831 TTCTTGGTCTGTTCCACCGG 59.892 55.000 0.00 0.00 37.20 5.28
590 591 1.966451 CTTGGTCTGTTCCACCGGC 60.966 63.158 0.00 0.00 37.20 6.13
591 592 3.485346 TTGGTCTGTTCCACCGGCC 62.485 63.158 0.00 0.00 37.20 6.13
592 593 3.948719 GGTCTGTTCCACCGGCCA 61.949 66.667 0.00 0.00 26.81 5.36
593 594 2.668550 GTCTGTTCCACCGGCCAC 60.669 66.667 0.00 0.00 0.00 5.01
594 595 3.948719 TCTGTTCCACCGGCCACC 61.949 66.667 0.00 0.00 0.00 4.61
597 598 4.006357 GTTCCACCGGCCACCGTA 62.006 66.667 0.00 0.00 46.80 4.02
598 599 3.697747 TTCCACCGGCCACCGTAG 61.698 66.667 0.00 0.00 46.80 3.51
611 612 3.592814 CGTAGGATGCGCGAGGGA 61.593 66.667 12.10 0.00 37.41 4.20
612 613 2.027751 GTAGGATGCGCGAGGGAC 59.972 66.667 12.10 0.00 0.00 4.46
613 614 3.592814 TAGGATGCGCGAGGGACG 61.593 66.667 12.10 0.00 45.66 4.79
616 617 3.896133 GATGCGCGAGGGACGGTA 61.896 66.667 12.10 0.00 42.83 4.02
617 618 3.825833 GATGCGCGAGGGACGGTAG 62.826 68.421 12.10 0.00 42.83 3.18
620 621 3.136123 CGCGAGGGACGGTAGGAA 61.136 66.667 0.00 0.00 42.83 3.36
621 622 2.703798 CGCGAGGGACGGTAGGAAA 61.704 63.158 0.00 0.00 42.83 3.13
622 623 1.153686 GCGAGGGACGGTAGGAAAC 60.154 63.158 0.00 0.00 42.83 2.78
623 624 1.138247 CGAGGGACGGTAGGAAACG 59.862 63.158 0.00 0.00 38.46 3.60
624 625 1.308069 CGAGGGACGGTAGGAAACGA 61.308 60.000 0.00 0.00 38.46 3.85
625 626 1.109609 GAGGGACGGTAGGAAACGAT 58.890 55.000 0.00 0.00 0.00 3.73
626 627 1.066757 GAGGGACGGTAGGAAACGATC 59.933 57.143 0.00 0.00 0.00 3.69
627 628 0.248784 GGGACGGTAGGAAACGATCG 60.249 60.000 14.88 14.88 0.00 3.69
628 629 0.734889 GGACGGTAGGAAACGATCGA 59.265 55.000 24.34 0.00 0.00 3.59
629 630 1.532713 GGACGGTAGGAAACGATCGAC 60.533 57.143 24.34 8.04 0.00 4.20
639 640 2.024871 CGATCGACGTCCCTCTGC 59.975 66.667 10.26 0.00 37.22 4.26
640 641 2.761195 CGATCGACGTCCCTCTGCA 61.761 63.158 10.26 0.00 37.22 4.41
641 642 1.064946 GATCGACGTCCCTCTGCAG 59.935 63.158 7.63 7.63 0.00 4.41
642 643 1.658686 GATCGACGTCCCTCTGCAGT 61.659 60.000 14.67 0.00 0.00 4.40
643 644 0.393944 ATCGACGTCCCTCTGCAGTA 60.394 55.000 14.67 0.00 0.00 2.74
644 645 1.136984 CGACGTCCCTCTGCAGTAC 59.863 63.158 14.67 7.33 0.00 2.73
645 646 1.306642 CGACGTCCCTCTGCAGTACT 61.307 60.000 14.67 0.00 0.00 2.73
646 647 0.889306 GACGTCCCTCTGCAGTACTT 59.111 55.000 14.67 2.04 0.00 2.24
647 648 0.889306 ACGTCCCTCTGCAGTACTTC 59.111 55.000 14.67 2.52 0.00 3.01
648 649 1.178276 CGTCCCTCTGCAGTACTTCT 58.822 55.000 14.67 0.00 0.00 2.85
649 650 2.290768 ACGTCCCTCTGCAGTACTTCTA 60.291 50.000 14.67 0.00 0.00 2.10
650 651 2.097791 CGTCCCTCTGCAGTACTTCTAC 59.902 54.545 14.67 3.74 0.00 2.59
651 652 2.427812 GTCCCTCTGCAGTACTTCTACC 59.572 54.545 14.67 0.00 0.00 3.18
652 653 2.312140 TCCCTCTGCAGTACTTCTACCT 59.688 50.000 14.67 0.00 0.00 3.08
653 654 3.100671 CCCTCTGCAGTACTTCTACCTT 58.899 50.000 14.67 0.00 0.00 3.50
654 655 4.017775 TCCCTCTGCAGTACTTCTACCTTA 60.018 45.833 14.67 0.00 0.00 2.69
655 656 4.098196 CCCTCTGCAGTACTTCTACCTTAC 59.902 50.000 14.67 0.00 0.00 2.34
656 657 4.201930 CCTCTGCAGTACTTCTACCTTACG 60.202 50.000 14.67 0.00 0.00 3.18
657 658 4.330250 TCTGCAGTACTTCTACCTTACGT 58.670 43.478 14.67 0.00 0.00 3.57
658 659 4.394300 TCTGCAGTACTTCTACCTTACGTC 59.606 45.833 14.67 0.00 0.00 4.34
659 660 4.074259 TGCAGTACTTCTACCTTACGTCA 58.926 43.478 0.00 0.00 0.00 4.35
660 661 4.155462 TGCAGTACTTCTACCTTACGTCAG 59.845 45.833 0.00 0.00 0.00 3.51
661 662 4.394300 GCAGTACTTCTACCTTACGTCAGA 59.606 45.833 0.00 0.00 0.00 3.27
662 663 5.673318 GCAGTACTTCTACCTTACGTCAGAC 60.673 48.000 0.00 0.00 0.00 3.51
664 665 3.668447 ACTTCTACCTTACGTCAGACGA 58.332 45.455 29.53 10.29 46.05 4.20
665 666 4.260170 ACTTCTACCTTACGTCAGACGAT 58.740 43.478 29.53 15.41 46.05 3.73
666 667 4.332268 ACTTCTACCTTACGTCAGACGATC 59.668 45.833 29.53 0.00 46.05 3.69
667 668 4.134379 TCTACCTTACGTCAGACGATCT 57.866 45.455 29.53 9.87 46.05 2.75
668 669 3.869832 TCTACCTTACGTCAGACGATCTG 59.130 47.826 29.53 15.99 46.05 2.90
669 670 1.743958 ACCTTACGTCAGACGATCTGG 59.256 52.381 29.53 23.29 46.05 3.86
705 706 1.802069 GAGAAAGACGAAAGCAGGCT 58.198 50.000 0.00 0.00 0.00 4.58
806 2781 0.706729 GTCGTTTTACTCGCTGGACG 59.293 55.000 0.00 0.00 45.62 4.79
807 2782 0.311790 TCGTTTTACTCGCTGGACGT 59.688 50.000 0.00 0.00 44.19 4.34
808 2783 0.706729 CGTTTTACTCGCTGGACGTC 59.293 55.000 7.13 7.13 44.19 4.34
809 2784 1.665161 CGTTTTACTCGCTGGACGTCT 60.665 52.381 16.46 0.00 44.19 4.18
810 2785 1.719780 GTTTTACTCGCTGGACGTCTG 59.280 52.381 16.46 9.94 44.19 3.51
811 2786 1.241165 TTTACTCGCTGGACGTCTGA 58.759 50.000 16.46 7.73 44.19 3.27
846 2823 4.898829 CATCCGATGCCTGTCAATTAAA 57.101 40.909 0.00 0.00 0.00 1.52
847 2824 5.443185 CATCCGATGCCTGTCAATTAAAT 57.557 39.130 0.00 0.00 0.00 1.40
848 2825 5.455392 CATCCGATGCCTGTCAATTAAATC 58.545 41.667 0.00 0.00 0.00 2.17
849 2826 3.882888 TCCGATGCCTGTCAATTAAATCC 59.117 43.478 0.00 0.00 0.00 3.01
850 2827 3.303990 CCGATGCCTGTCAATTAAATCCG 60.304 47.826 0.00 0.00 0.00 4.18
851 2828 3.559655 CGATGCCTGTCAATTAAATCCGA 59.440 43.478 0.00 0.00 0.00 4.55
852 2829 4.214119 CGATGCCTGTCAATTAAATCCGAT 59.786 41.667 0.00 0.00 0.00 4.18
853 2830 4.898829 TGCCTGTCAATTAAATCCGATG 57.101 40.909 0.00 0.00 0.00 3.84
854 2831 3.066621 TGCCTGTCAATTAAATCCGATGC 59.933 43.478 0.00 0.00 0.00 3.91
855 2832 3.550842 GCCTGTCAATTAAATCCGATGCC 60.551 47.826 0.00 0.00 0.00 4.40
856 2833 3.631686 CCTGTCAATTAAATCCGATGCCA 59.368 43.478 0.00 0.00 0.00 4.92
857 2834 4.279169 CCTGTCAATTAAATCCGATGCCAT 59.721 41.667 0.00 0.00 0.00 4.40
858 2835 5.185668 TGTCAATTAAATCCGATGCCATG 57.814 39.130 0.00 0.00 0.00 3.66
859 2836 3.983344 GTCAATTAAATCCGATGCCATGC 59.017 43.478 0.00 0.00 0.00 4.06
860 2837 2.981805 CAATTAAATCCGATGCCATGCG 59.018 45.455 0.00 0.00 0.00 4.73
892 2869 9.030301 CAGTTAAATTTTTACCTCCAACAGTTG 57.970 33.333 6.28 6.28 0.00 3.16
900 2877 4.688419 CCAACAGTTGCGCGGCTG 62.688 66.667 23.54 23.54 38.58 4.85
1050 3167 1.229359 CATGCTCCCCTTCATGGCT 59.771 57.895 0.00 0.00 37.13 4.75
1506 3647 3.682885 TCGCCAACCGAGCCGTTA 61.683 61.111 0.00 0.00 41.89 3.18
2185 6623 2.983879 ATGGGGCTCCGAGTTTGGG 61.984 63.158 0.00 0.00 35.24 4.12
2242 6680 2.024319 GTGAGTGGAGACGTGCAGC 61.024 63.158 0.00 0.00 0.00 5.25
2549 6992 8.186821 GTCTTACTCTTTACCGCTTCACTATTA 58.813 37.037 0.00 0.00 0.00 0.98
2831 7795 4.577693 CAGTGAGACCCATGTCATTTATGG 59.422 45.833 0.00 0.00 44.33 2.74
2839 7803 6.498538 ACCCATGTCATTTATGGAGGTAAAA 58.501 36.000 5.62 0.00 46.42 1.52
2884 7848 4.378046 GCGTAAGGTGGTTAGTTTGATGTG 60.378 45.833 0.00 0.00 38.28 3.21
2885 7849 4.378046 CGTAAGGTGGTTAGTTTGATGTGC 60.378 45.833 0.00 0.00 0.00 4.57
2903 7867 7.862648 TGATGTGCAAACTTACAAAATACGTA 58.137 30.769 0.00 0.00 0.00 3.57
2952 7916 4.300189 TGCAAATACGGCCATATTTCAC 57.700 40.909 13.74 9.79 33.40 3.18
3059 8023 2.357517 AGGCCGAACTTCACAGCG 60.358 61.111 0.00 0.00 0.00 5.18
3162 8126 3.402628 ACACCGTCTCAGCTTTACAAT 57.597 42.857 0.00 0.00 0.00 2.71
3163 8127 3.067106 ACACCGTCTCAGCTTTACAATG 58.933 45.455 0.00 0.00 0.00 2.82
3188 8152 4.160635 GAATGCGGCCGTCCAACG 62.161 66.667 28.70 0.00 42.11 4.10
3190 8154 3.592856 AATGCGGCCGTCCAACGTA 62.593 57.895 28.70 2.22 40.58 3.57
3192 8156 4.729856 GCGGCCGTCCAACGTACT 62.730 66.667 28.70 0.00 40.58 2.73
3193 8157 2.505557 CGGCCGTCCAACGTACTC 60.506 66.667 19.50 0.00 40.58 2.59
3194 8158 2.125793 GGCCGTCCAACGTACTCC 60.126 66.667 0.00 0.00 40.58 3.85
3195 8159 2.125793 GCCGTCCAACGTACTCCC 60.126 66.667 0.00 0.00 40.58 4.30
3196 8160 2.180017 CCGTCCAACGTACTCCCG 59.820 66.667 0.00 0.00 40.58 5.14
3197 8161 2.629656 CCGTCCAACGTACTCCCGT 61.630 63.158 0.00 0.00 44.23 5.28
3198 8162 1.154150 CGTCCAACGTACTCCCGTC 60.154 63.158 0.00 0.00 40.85 4.79
3199 8163 1.855213 CGTCCAACGTACTCCCGTCA 61.855 60.000 0.00 0.00 40.85 4.35
3200 8164 0.387750 GTCCAACGTACTCCCGTCAC 60.388 60.000 0.00 0.00 40.85 3.67
3201 8165 0.822944 TCCAACGTACTCCCGTCACA 60.823 55.000 0.00 0.00 40.85 3.58
3202 8166 0.032403 CCAACGTACTCCCGTCACAA 59.968 55.000 0.00 0.00 40.85 3.33
3203 8167 1.415374 CAACGTACTCCCGTCACAAG 58.585 55.000 0.00 0.00 40.85 3.16
3204 8168 1.035139 AACGTACTCCCGTCACAAGT 58.965 50.000 0.00 0.00 40.85 3.16
3205 8169 1.896220 ACGTACTCCCGTCACAAGTA 58.104 50.000 0.00 0.00 35.95 2.24
3206 8170 2.440409 ACGTACTCCCGTCACAAGTAT 58.560 47.619 0.00 0.00 35.95 2.12
3207 8171 2.821969 ACGTACTCCCGTCACAAGTATT 59.178 45.455 0.00 0.00 35.95 1.89
3208 8172 3.256631 ACGTACTCCCGTCACAAGTATTT 59.743 43.478 0.00 0.00 35.95 1.40
3209 8173 4.240096 CGTACTCCCGTCACAAGTATTTT 58.760 43.478 0.00 0.00 0.00 1.82
3210 8174 4.325472 CGTACTCCCGTCACAAGTATTTTC 59.675 45.833 0.00 0.00 0.00 2.29
3211 8175 3.323243 ACTCCCGTCACAAGTATTTTCG 58.677 45.455 0.00 0.00 0.00 3.46
3212 8176 2.671396 CTCCCGTCACAAGTATTTTCGG 59.329 50.000 0.00 0.00 36.85 4.30
3213 8177 2.299582 TCCCGTCACAAGTATTTTCGGA 59.700 45.455 0.00 0.00 38.96 4.55
3214 8178 2.414138 CCCGTCACAAGTATTTTCGGAC 59.586 50.000 0.00 0.00 38.96 4.79
3215 8179 2.091588 CCGTCACAAGTATTTTCGGACG 59.908 50.000 0.00 0.00 44.29 4.79
3216 8180 2.091588 CGTCACAAGTATTTTCGGACGG 59.908 50.000 0.00 0.00 41.89 4.79
3217 8181 3.319755 GTCACAAGTATTTTCGGACGGA 58.680 45.455 0.00 0.00 0.00 4.69
3218 8182 3.367025 GTCACAAGTATTTTCGGACGGAG 59.633 47.826 0.00 0.00 0.00 4.63
3219 8183 3.256383 TCACAAGTATTTTCGGACGGAGA 59.744 43.478 0.00 0.00 0.00 3.71
3220 8184 3.612860 CACAAGTATTTTCGGACGGAGAG 59.387 47.826 0.00 0.00 0.00 3.20
3221 8185 3.508793 ACAAGTATTTTCGGACGGAGAGA 59.491 43.478 0.00 0.00 0.00 3.10
3318 8283 3.550437 GACATGCAGTCTATCCACCTT 57.450 47.619 8.50 0.00 44.09 3.50
3349 8314 6.183360 GCTTGCCACATCAACATTCTATTACT 60.183 38.462 0.00 0.00 0.00 2.24
3397 8362 2.362120 GCCTTGCCACATCAGCCT 60.362 61.111 0.00 0.00 0.00 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.904990 GAGGAGGAGAAGGTGTGGCC 61.905 65.000 0.00 0.00 37.58 5.36
9 10 1.599576 GAGGAGGAGAAGGTGTGGC 59.400 63.158 0.00 0.00 0.00 5.01
10 11 0.545309 TGGAGGAGGAGAAGGTGTGG 60.545 60.000 0.00 0.00 0.00 4.17
11 12 0.901124 CTGGAGGAGGAGAAGGTGTG 59.099 60.000 0.00 0.00 0.00 3.82
12 13 0.907230 GCTGGAGGAGGAGAAGGTGT 60.907 60.000 0.00 0.00 0.00 4.16
13 14 0.906756 TGCTGGAGGAGGAGAAGGTG 60.907 60.000 0.00 0.00 0.00 4.00
14 15 0.178891 TTGCTGGAGGAGGAGAAGGT 60.179 55.000 0.00 0.00 0.00 3.50
15 16 0.251634 GTTGCTGGAGGAGGAGAAGG 59.748 60.000 0.00 0.00 0.00 3.46
16 17 0.979665 TGTTGCTGGAGGAGGAGAAG 59.020 55.000 0.00 0.00 0.00 2.85
17 18 0.979665 CTGTTGCTGGAGGAGGAGAA 59.020 55.000 0.00 0.00 0.00 2.87
18 19 0.178921 ACTGTTGCTGGAGGAGGAGA 60.179 55.000 0.00 0.00 0.00 3.71
19 20 0.036577 CACTGTTGCTGGAGGAGGAG 60.037 60.000 0.00 0.00 0.00 3.69
20 21 2.061220 CACTGTTGCTGGAGGAGGA 58.939 57.895 0.00 0.00 0.00 3.71
21 22 1.673665 GCACTGTTGCTGGAGGAGG 60.674 63.158 0.00 0.00 46.17 4.30
22 23 3.978272 GCACTGTTGCTGGAGGAG 58.022 61.111 0.00 0.00 46.17 3.69
46 47 3.851845 TTCGTTGACTGTCCCGCCG 62.852 63.158 5.17 2.63 0.00 6.46
47 48 2.027625 CTTCGTTGACTGTCCCGCC 61.028 63.158 5.17 0.00 0.00 6.13
48 49 2.027625 CCTTCGTTGACTGTCCCGC 61.028 63.158 5.17 0.00 0.00 6.13
49 50 0.388649 CTCCTTCGTTGACTGTCCCG 60.389 60.000 5.17 7.89 0.00 5.14
50 51 0.037232 CCTCCTTCGTTGACTGTCCC 60.037 60.000 5.17 0.00 0.00 4.46
51 52 0.966920 TCCTCCTTCGTTGACTGTCC 59.033 55.000 5.17 0.00 0.00 4.02
52 53 1.067495 CCTCCTCCTTCGTTGACTGTC 60.067 57.143 0.00 0.00 0.00 3.51
53 54 0.969894 CCTCCTCCTTCGTTGACTGT 59.030 55.000 0.00 0.00 0.00 3.55
54 55 0.390472 GCCTCCTCCTTCGTTGACTG 60.390 60.000 0.00 0.00 0.00 3.51
55 56 1.878656 CGCCTCCTCCTTCGTTGACT 61.879 60.000 0.00 0.00 0.00 3.41
56 57 1.446272 CGCCTCCTCCTTCGTTGAC 60.446 63.158 0.00 0.00 0.00 3.18
57 58 2.970639 CGCCTCCTCCTTCGTTGA 59.029 61.111 0.00 0.00 0.00 3.18
58 59 2.815647 GCGCCTCCTCCTTCGTTG 60.816 66.667 0.00 0.00 0.00 4.10
59 60 4.436998 CGCGCCTCCTCCTTCGTT 62.437 66.667 0.00 0.00 0.00 3.85
80 81 4.699522 AAACCGCTCTCCCACGCC 62.700 66.667 0.00 0.00 0.00 5.68
81 82 3.119096 GAAACCGCTCTCCCACGC 61.119 66.667 0.00 0.00 0.00 5.34
82 83 1.079127 ATGAAACCGCTCTCCCACG 60.079 57.895 0.00 0.00 0.00 4.94
83 84 0.250513 AGATGAAACCGCTCTCCCAC 59.749 55.000 0.00 0.00 0.00 4.61
84 85 0.250234 CAGATGAAACCGCTCTCCCA 59.750 55.000 0.00 0.00 0.00 4.37
85 86 0.462759 CCAGATGAAACCGCTCTCCC 60.463 60.000 0.00 0.00 0.00 4.30
86 87 1.092345 GCCAGATGAAACCGCTCTCC 61.092 60.000 0.00 0.00 0.00 3.71
87 88 0.107945 AGCCAGATGAAACCGCTCTC 60.108 55.000 0.00 0.00 0.00 3.20
88 89 0.326264 AAGCCAGATGAAACCGCTCT 59.674 50.000 0.00 0.00 0.00 4.09
89 90 0.449388 CAAGCCAGATGAAACCGCTC 59.551 55.000 0.00 0.00 0.00 5.03
90 91 0.962356 CCAAGCCAGATGAAACCGCT 60.962 55.000 0.00 0.00 0.00 5.52
91 92 1.508088 CCAAGCCAGATGAAACCGC 59.492 57.895 0.00 0.00 0.00 5.68
92 93 1.937546 GCCCAAGCCAGATGAAACCG 61.938 60.000 0.00 0.00 0.00 4.44
93 94 0.613012 AGCCCAAGCCAGATGAAACC 60.613 55.000 0.00 0.00 41.25 3.27
94 95 0.529378 CAGCCCAAGCCAGATGAAAC 59.471 55.000 0.00 0.00 41.25 2.78
95 96 0.612732 CCAGCCCAAGCCAGATGAAA 60.613 55.000 0.00 0.00 41.25 2.69
96 97 1.000521 CCAGCCCAAGCCAGATGAA 60.001 57.895 0.00 0.00 41.25 2.57
97 98 2.679092 CCAGCCCAAGCCAGATGA 59.321 61.111 0.00 0.00 41.25 2.92
98 99 2.441532 CCCAGCCCAAGCCAGATG 60.442 66.667 0.00 0.00 41.25 2.90
99 100 3.747579 CCCCAGCCCAAGCCAGAT 61.748 66.667 0.00 0.00 41.25 2.90
123 124 2.202756 GCCGGTGAGGTCGATGAC 60.203 66.667 1.90 0.00 43.70 3.06
124 125 3.458163 GGCCGGTGAGGTCGATGA 61.458 66.667 1.90 0.00 43.70 2.92
175 176 2.655952 AAAAACTTGCACGGTCGGCG 62.656 55.000 0.00 0.00 0.00 6.46
176 177 1.065109 AAAAACTTGCACGGTCGGC 59.935 52.632 0.00 0.00 0.00 5.54
203 204 9.902196 CCGACCAAAGTTTACTTAAACATTAAT 57.098 29.630 13.10 1.30 45.97 1.40
204 205 7.861872 GCCGACCAAAGTTTACTTAAACATTAA 59.138 33.333 13.10 0.00 45.97 1.40
205 206 7.361894 GCCGACCAAAGTTTACTTAAACATTA 58.638 34.615 13.10 0.00 45.97 1.90
206 207 6.210796 GCCGACCAAAGTTTACTTAAACATT 58.789 36.000 13.10 5.76 45.97 2.71
207 208 5.561339 CGCCGACCAAAGTTTACTTAAACAT 60.561 40.000 13.10 0.00 45.97 2.71
208 209 4.260702 CGCCGACCAAAGTTTACTTAAACA 60.261 41.667 13.10 0.00 45.97 2.83
209 210 4.213674 CGCCGACCAAAGTTTACTTAAAC 58.786 43.478 4.01 4.01 44.38 2.01
210 211 3.250521 CCGCCGACCAAAGTTTACTTAAA 59.749 43.478 0.00 0.00 34.61 1.52
211 212 2.807392 CCGCCGACCAAAGTTTACTTAA 59.193 45.455 0.00 0.00 34.61 1.85
212 213 2.224257 ACCGCCGACCAAAGTTTACTTA 60.224 45.455 0.00 0.00 34.61 2.24
213 214 1.232119 CCGCCGACCAAAGTTTACTT 58.768 50.000 0.00 0.00 37.91 2.24
214 215 0.107268 ACCGCCGACCAAAGTTTACT 59.893 50.000 0.00 0.00 0.00 2.24
215 216 0.946528 AACCGCCGACCAAAGTTTAC 59.053 50.000 0.00 0.00 0.00 2.01
216 217 0.945813 CAACCGCCGACCAAAGTTTA 59.054 50.000 0.00 0.00 0.00 2.01
217 218 0.748729 TCAACCGCCGACCAAAGTTT 60.749 50.000 0.00 0.00 0.00 2.66
218 219 0.536460 ATCAACCGCCGACCAAAGTT 60.536 50.000 0.00 0.00 0.00 2.66
219 220 0.953960 GATCAACCGCCGACCAAAGT 60.954 55.000 0.00 0.00 0.00 2.66
220 221 1.794222 GATCAACCGCCGACCAAAG 59.206 57.895 0.00 0.00 0.00 2.77
221 222 2.030401 CGATCAACCGCCGACCAAA 61.030 57.895 0.00 0.00 0.00 3.28
222 223 2.433491 CGATCAACCGCCGACCAA 60.433 61.111 0.00 0.00 0.00 3.67
223 224 3.375239 TCGATCAACCGCCGACCA 61.375 61.111 0.00 0.00 0.00 4.02
224 225 2.884207 GTCGATCAACCGCCGACC 60.884 66.667 0.00 0.00 44.67 4.79
226 227 2.233605 AATGGTCGATCAACCGCCGA 62.234 55.000 0.60 0.00 42.62 5.54
227 228 1.366111 AAATGGTCGATCAACCGCCG 61.366 55.000 0.60 0.00 42.62 6.46
228 229 1.658994 TAAATGGTCGATCAACCGCC 58.341 50.000 0.60 0.00 42.62 6.13
229 230 3.963383 ATTAAATGGTCGATCAACCGC 57.037 42.857 0.60 0.00 42.62 5.68
249 250 9.440784 CGCAGCCGAAATAAACTTAATTAAATA 57.559 29.630 0.00 0.00 36.29 1.40
250 251 7.971722 ACGCAGCCGAAATAAACTTAATTAAAT 59.028 29.630 0.00 0.00 38.29 1.40
251 252 7.271653 CACGCAGCCGAAATAAACTTAATTAAA 59.728 33.333 0.00 0.00 38.29 1.52
252 253 6.743627 CACGCAGCCGAAATAAACTTAATTAA 59.256 34.615 0.00 0.00 38.29 1.40
253 254 6.128227 ACACGCAGCCGAAATAAACTTAATTA 60.128 34.615 0.00 0.00 38.29 1.40
254 255 5.092781 CACGCAGCCGAAATAAACTTAATT 58.907 37.500 0.00 0.00 38.29 1.40
255 256 4.155280 ACACGCAGCCGAAATAAACTTAAT 59.845 37.500 0.00 0.00 38.29 1.40
256 257 3.499157 ACACGCAGCCGAAATAAACTTAA 59.501 39.130 0.00 0.00 38.29 1.85
257 258 3.068560 ACACGCAGCCGAAATAAACTTA 58.931 40.909 0.00 0.00 38.29 2.24
258 259 1.877443 ACACGCAGCCGAAATAAACTT 59.123 42.857 0.00 0.00 38.29 2.66
259 260 1.519408 ACACGCAGCCGAAATAAACT 58.481 45.000 0.00 0.00 38.29 2.66
260 261 2.325509 AACACGCAGCCGAAATAAAC 57.674 45.000 0.00 0.00 38.29 2.01
261 262 3.357166 AAAACACGCAGCCGAAATAAA 57.643 38.095 0.00 0.00 38.29 1.40
262 263 3.357166 AAAAACACGCAGCCGAAATAA 57.643 38.095 0.00 0.00 38.29 1.40
264 265 3.957383 AAAAACACGCAGCCGAAAT 57.043 42.105 0.00 0.00 38.29 2.17
279 280 9.291664 CCCGCGTCAAGAAAATATATTTAAAAA 57.708 29.630 11.07 0.00 0.00 1.94
280 281 8.675504 TCCCGCGTCAAGAAAATATATTTAAAA 58.324 29.630 11.07 0.00 0.00 1.52
281 282 8.211116 TCCCGCGTCAAGAAAATATATTTAAA 57.789 30.769 11.07 0.00 0.00 1.52
282 283 7.789273 TCCCGCGTCAAGAAAATATATTTAA 57.211 32.000 11.07 0.00 0.00 1.52
283 284 7.789273 TTCCCGCGTCAAGAAAATATATTTA 57.211 32.000 11.07 0.00 0.00 1.40
284 285 6.687081 TTCCCGCGTCAAGAAAATATATTT 57.313 33.333 4.92 4.81 0.00 1.40
285 286 6.687081 TTTCCCGCGTCAAGAAAATATATT 57.313 33.333 4.92 0.00 0.00 1.28
286 287 6.687081 TTTTCCCGCGTCAAGAAAATATAT 57.313 33.333 4.92 0.00 35.24 0.86
287 288 6.687081 ATTTTCCCGCGTCAAGAAAATATA 57.313 33.333 23.29 7.97 44.35 0.86
288 289 5.576447 ATTTTCCCGCGTCAAGAAAATAT 57.424 34.783 23.29 10.61 44.35 1.28
289 290 5.379732 AATTTTCCCGCGTCAAGAAAATA 57.620 34.783 24.12 9.42 45.03 1.40
290 291 3.934457 ATTTTCCCGCGTCAAGAAAAT 57.066 38.095 20.94 20.94 42.48 1.82
291 292 3.719173 AATTTTCCCGCGTCAAGAAAA 57.281 38.095 19.10 19.10 42.04 2.29
292 293 3.066900 TCAAATTTTCCCGCGTCAAGAAA 59.933 39.130 4.92 6.07 0.00 2.52
293 294 2.619177 TCAAATTTTCCCGCGTCAAGAA 59.381 40.909 4.92 0.00 0.00 2.52
294 295 2.222886 TCAAATTTTCCCGCGTCAAGA 58.777 42.857 4.92 0.00 0.00 3.02
295 296 2.697431 TCAAATTTTCCCGCGTCAAG 57.303 45.000 4.92 0.00 0.00 3.02
296 297 2.352225 CCATCAAATTTTCCCGCGTCAA 60.352 45.455 4.92 0.00 0.00 3.18
297 298 1.201181 CCATCAAATTTTCCCGCGTCA 59.799 47.619 4.92 0.00 0.00 4.35
298 299 1.470890 TCCATCAAATTTTCCCGCGTC 59.529 47.619 4.92 0.00 0.00 5.19
299 300 1.201414 GTCCATCAAATTTTCCCGCGT 59.799 47.619 4.92 0.00 0.00 6.01
300 301 1.201181 TGTCCATCAAATTTTCCCGCG 59.799 47.619 0.00 0.00 0.00 6.46
301 302 3.311486 TTGTCCATCAAATTTTCCCGC 57.689 42.857 0.00 0.00 32.64 6.13
302 303 5.390779 GCATTTTGTCCATCAAATTTTCCCG 60.391 40.000 0.00 0.00 44.15 5.14
303 304 5.390779 CGCATTTTGTCCATCAAATTTTCCC 60.391 40.000 0.00 0.00 44.15 3.97
304 305 5.620467 CGCATTTTGTCCATCAAATTTTCC 58.380 37.500 0.00 0.00 44.15 3.13
305 306 5.081394 GCGCATTTTGTCCATCAAATTTTC 58.919 37.500 0.30 0.00 44.15 2.29
306 307 4.377226 CGCGCATTTTGTCCATCAAATTTT 60.377 37.500 8.75 0.00 44.15 1.82
307 308 3.123284 CGCGCATTTTGTCCATCAAATTT 59.877 39.130 8.75 0.00 44.15 1.82
308 309 2.667481 CGCGCATTTTGTCCATCAAATT 59.333 40.909 8.75 0.00 44.15 1.82
309 310 2.261345 CGCGCATTTTGTCCATCAAAT 58.739 42.857 8.75 0.00 44.15 2.32
310 311 1.000827 ACGCGCATTTTGTCCATCAAA 60.001 42.857 5.73 0.00 43.24 2.69
311 312 0.595588 ACGCGCATTTTGTCCATCAA 59.404 45.000 5.73 0.00 0.00 2.57
312 313 0.595588 AACGCGCATTTTGTCCATCA 59.404 45.000 5.73 0.00 0.00 3.07
313 314 1.259316 GAACGCGCATTTTGTCCATC 58.741 50.000 5.73 0.00 0.00 3.51
314 315 0.454285 CGAACGCGCATTTTGTCCAT 60.454 50.000 5.73 0.00 0.00 3.41
315 316 1.082431 CGAACGCGCATTTTGTCCA 60.082 52.632 5.73 0.00 0.00 4.02
316 317 0.659123 AACGAACGCGCATTTTGTCC 60.659 50.000 5.73 0.00 42.48 4.02
317 318 0.425656 CAACGAACGCGCATTTTGTC 59.574 50.000 5.73 0.00 42.48 3.18
318 319 0.932585 CCAACGAACGCGCATTTTGT 60.933 50.000 5.73 7.03 42.48 2.83
319 320 0.658829 TCCAACGAACGCGCATTTTG 60.659 50.000 5.73 6.31 42.48 2.44
320 321 0.385473 CTCCAACGAACGCGCATTTT 60.385 50.000 5.73 0.00 42.48 1.82
321 322 1.206578 CTCCAACGAACGCGCATTT 59.793 52.632 5.73 0.00 42.48 2.32
322 323 1.897398 GACTCCAACGAACGCGCATT 61.897 55.000 5.73 0.00 42.48 3.56
323 324 2.357034 ACTCCAACGAACGCGCAT 60.357 55.556 5.73 0.00 42.48 4.73
324 325 3.033764 GACTCCAACGAACGCGCA 61.034 61.111 5.73 0.00 42.48 6.09
325 326 2.279937 GATGACTCCAACGAACGCGC 62.280 60.000 5.73 0.00 42.48 6.86
326 327 1.702299 GATGACTCCAACGAACGCG 59.298 57.895 3.53 3.53 44.79 6.01
327 328 1.702299 CGATGACTCCAACGAACGC 59.298 57.895 0.00 0.00 40.41 4.84
328 329 1.702299 GCGATGACTCCAACGAACG 59.298 57.895 0.00 0.00 40.41 3.95
329 330 1.007336 ACGCGATGACTCCAACGAAC 61.007 55.000 15.93 0.00 40.41 3.95
330 331 0.319211 AACGCGATGACTCCAACGAA 60.319 50.000 15.93 0.00 40.41 3.85
331 332 1.006825 CAACGCGATGACTCCAACGA 61.007 55.000 15.93 0.00 40.41 3.85
332 333 1.416049 CAACGCGATGACTCCAACG 59.584 57.895 15.93 0.00 40.84 4.10
333 334 1.787847 CCAACGCGATGACTCCAAC 59.212 57.895 18.77 0.00 0.00 3.77
334 335 2.032634 GCCAACGCGATGACTCCAA 61.033 57.895 18.77 0.00 0.00 3.53
335 336 2.434185 GCCAACGCGATGACTCCA 60.434 61.111 18.77 0.00 0.00 3.86
346 347 1.291877 AACTTAGAGCAGCGCCAACG 61.292 55.000 2.29 0.00 44.07 4.10
347 348 0.444260 GAACTTAGAGCAGCGCCAAC 59.556 55.000 2.29 0.00 0.00 3.77
348 349 0.321671 AGAACTTAGAGCAGCGCCAA 59.678 50.000 2.29 0.00 0.00 4.52
349 350 0.108615 GAGAACTTAGAGCAGCGCCA 60.109 55.000 2.29 0.00 0.00 5.69
350 351 0.174617 AGAGAACTTAGAGCAGCGCC 59.825 55.000 2.29 0.00 0.00 6.53
351 352 2.098443 ACTAGAGAACTTAGAGCAGCGC 59.902 50.000 0.00 0.00 0.00 5.92
352 353 3.625764 AGACTAGAGAACTTAGAGCAGCG 59.374 47.826 0.00 0.00 0.00 5.18
353 354 5.576447 AAGACTAGAGAACTTAGAGCAGC 57.424 43.478 0.00 0.00 0.00 5.25
411 412 9.971744 CGTATATATGATCAAAATTCGATGCAA 57.028 29.630 0.00 0.00 0.00 4.08
412 413 9.364989 TCGTATATATGATCAAAATTCGATGCA 57.635 29.630 0.00 0.00 0.00 3.96
424 425 9.529823 ACTAGGGAACTTTCGTATATATGATCA 57.470 33.333 5.48 0.00 43.67 2.92
426 427 9.529823 TGACTAGGGAACTTTCGTATATATGAT 57.470 33.333 5.48 0.00 43.67 2.45
427 428 8.929260 TGACTAGGGAACTTTCGTATATATGA 57.071 34.615 0.20 0.20 43.67 2.15
428 429 9.408069 GTTGACTAGGGAACTTTCGTATATATG 57.592 37.037 0.00 0.00 43.67 1.78
429 430 8.295288 CGTTGACTAGGGAACTTTCGTATATAT 58.705 37.037 0.00 0.00 43.67 0.86
430 431 7.283127 ACGTTGACTAGGGAACTTTCGTATATA 59.717 37.037 0.00 0.00 43.67 0.86
431 432 6.096001 ACGTTGACTAGGGAACTTTCGTATAT 59.904 38.462 0.00 0.00 43.67 0.86
432 433 5.415701 ACGTTGACTAGGGAACTTTCGTATA 59.584 40.000 0.00 0.00 43.67 1.47
433 434 4.219288 ACGTTGACTAGGGAACTTTCGTAT 59.781 41.667 0.00 0.00 43.67 3.06
434 435 3.569701 ACGTTGACTAGGGAACTTTCGTA 59.430 43.478 0.00 0.00 43.67 3.43
435 436 2.363359 ACGTTGACTAGGGAACTTTCGT 59.637 45.455 0.00 0.00 43.67 3.85
436 437 2.729882 CACGTTGACTAGGGAACTTTCG 59.270 50.000 0.00 0.00 43.67 3.46
437 438 3.725490 ACACGTTGACTAGGGAACTTTC 58.275 45.455 0.00 0.00 43.67 2.62
438 439 3.832615 ACACGTTGACTAGGGAACTTT 57.167 42.857 0.00 0.00 43.67 2.66
439 440 3.463944 CAACACGTTGACTAGGGAACTT 58.536 45.455 3.79 0.00 42.93 2.66
440 441 2.224209 CCAACACGTTGACTAGGGAACT 60.224 50.000 11.46 0.00 42.93 3.01
441 442 2.140717 CCAACACGTTGACTAGGGAAC 58.859 52.381 11.46 0.00 42.93 3.62
442 443 1.541670 GCCAACACGTTGACTAGGGAA 60.542 52.381 11.46 0.00 42.93 3.97
443 444 0.034337 GCCAACACGTTGACTAGGGA 59.966 55.000 11.46 0.00 42.93 4.20
444 445 0.250124 TGCCAACACGTTGACTAGGG 60.250 55.000 11.46 0.00 42.93 3.53
445 446 1.148310 CTGCCAACACGTTGACTAGG 58.852 55.000 11.46 0.00 42.93 3.02
446 447 0.512952 GCTGCCAACACGTTGACTAG 59.487 55.000 11.46 7.38 42.93 2.57
447 448 1.218875 CGCTGCCAACACGTTGACTA 61.219 55.000 11.46 0.00 42.93 2.59
448 449 2.534019 CGCTGCCAACACGTTGACT 61.534 57.895 11.46 0.00 42.93 3.41
449 450 2.052237 CGCTGCCAACACGTTGAC 60.052 61.111 11.46 0.08 42.93 3.18
450 451 3.276091 CCGCTGCCAACACGTTGA 61.276 61.111 11.46 0.00 42.93 3.18
451 452 4.980903 GCCGCTGCCAACACGTTG 62.981 66.667 2.84 2.84 40.13 4.10
462 463 3.678014 TATATACTGCCGCTGCCGCTG 62.678 57.143 15.72 15.72 36.33 5.18
463 464 1.532604 TATATACTGCCGCTGCCGCT 61.533 55.000 13.74 0.00 36.33 5.52
464 465 1.080093 TATATACTGCCGCTGCCGC 60.080 57.895 6.01 6.01 36.33 6.53
465 466 1.071019 CGTATATACTGCCGCTGCCG 61.071 60.000 11.05 0.00 36.33 5.69
466 467 1.352156 GCGTATATACTGCCGCTGCC 61.352 60.000 11.05 0.00 42.66 4.85
467 468 2.070861 GCGTATATACTGCCGCTGC 58.929 57.895 11.05 0.00 42.66 5.25
470 471 1.455786 CAACAGCGTATATACTGCCGC 59.544 52.381 19.29 13.99 46.07 6.53
471 472 2.739292 ACAACAGCGTATATACTGCCG 58.261 47.619 19.29 14.57 37.42 5.69
472 473 3.869246 ACAACAACAGCGTATATACTGCC 59.131 43.478 19.29 6.54 37.42 4.85
473 474 5.464965 AACAACAACAGCGTATATACTGC 57.535 39.130 16.78 16.78 37.42 4.40
495 496 2.158325 AGCCCATTCACCTCAGGAAAAA 60.158 45.455 0.00 0.00 0.00 1.94
496 497 1.428912 AGCCCATTCACCTCAGGAAAA 59.571 47.619 0.00 0.00 0.00 2.29
497 498 1.075601 AGCCCATTCACCTCAGGAAA 58.924 50.000 0.00 0.00 0.00 3.13
498 499 0.329261 CAGCCCATTCACCTCAGGAA 59.671 55.000 0.00 0.00 0.00 3.36
499 500 0.842030 ACAGCCCATTCACCTCAGGA 60.842 55.000 0.00 0.00 0.00 3.86
500 501 0.038744 AACAGCCCATTCACCTCAGG 59.961 55.000 0.00 0.00 0.00 3.86
501 502 1.271543 TGAACAGCCCATTCACCTCAG 60.272 52.381 0.00 0.00 31.11 3.35
502 503 0.770499 TGAACAGCCCATTCACCTCA 59.230 50.000 0.00 0.00 31.11 3.86
503 504 1.747355 CATGAACAGCCCATTCACCTC 59.253 52.381 0.00 0.00 38.84 3.85
504 505 1.617804 CCATGAACAGCCCATTCACCT 60.618 52.381 0.00 0.00 38.84 4.00
505 506 0.819582 CCATGAACAGCCCATTCACC 59.180 55.000 0.00 0.00 38.84 4.02
506 507 0.819582 CCCATGAACAGCCCATTCAC 59.180 55.000 0.00 0.00 38.84 3.18
507 508 0.703488 TCCCATGAACAGCCCATTCA 59.297 50.000 0.00 0.00 40.25 2.57
508 509 1.396653 CTCCCATGAACAGCCCATTC 58.603 55.000 0.00 0.00 0.00 2.67
509 510 0.032813 CCTCCCATGAACAGCCCATT 60.033 55.000 0.00 0.00 0.00 3.16
510 511 0.920763 TCCTCCCATGAACAGCCCAT 60.921 55.000 0.00 0.00 0.00 4.00
511 512 0.920763 ATCCTCCCATGAACAGCCCA 60.921 55.000 0.00 0.00 0.00 5.36
512 513 0.259938 AATCCTCCCATGAACAGCCC 59.740 55.000 0.00 0.00 0.00 5.19
513 514 2.027385 GAAATCCTCCCATGAACAGCC 58.973 52.381 0.00 0.00 0.00 4.85
514 515 1.672881 CGAAATCCTCCCATGAACAGC 59.327 52.381 0.00 0.00 0.00 4.40
515 516 1.672881 GCGAAATCCTCCCATGAACAG 59.327 52.381 0.00 0.00 0.00 3.16
516 517 1.281867 AGCGAAATCCTCCCATGAACA 59.718 47.619 0.00 0.00 0.00 3.18
517 518 1.943340 GAGCGAAATCCTCCCATGAAC 59.057 52.381 0.00 0.00 0.00 3.18
518 519 1.473257 CGAGCGAAATCCTCCCATGAA 60.473 52.381 0.00 0.00 0.00 2.57
519 520 0.104855 CGAGCGAAATCCTCCCATGA 59.895 55.000 0.00 0.00 0.00 3.07
520 521 0.179073 ACGAGCGAAATCCTCCCATG 60.179 55.000 0.00 0.00 0.00 3.66
521 522 0.179073 CACGAGCGAAATCCTCCCAT 60.179 55.000 0.00 0.00 0.00 4.00
522 523 1.218047 CACGAGCGAAATCCTCCCA 59.782 57.895 0.00 0.00 0.00 4.37
523 524 1.521681 CCACGAGCGAAATCCTCCC 60.522 63.158 0.00 0.00 0.00 4.30
524 525 1.521681 CCCACGAGCGAAATCCTCC 60.522 63.158 0.00 0.00 0.00 4.30
525 526 2.174319 GCCCACGAGCGAAATCCTC 61.174 63.158 0.00 0.00 0.00 3.71
526 527 2.125106 GCCCACGAGCGAAATCCT 60.125 61.111 0.00 0.00 0.00 3.24
527 528 2.125106 AGCCCACGAGCGAAATCC 60.125 61.111 0.00 0.00 38.01 3.01
528 529 3.093278 CAGCCCACGAGCGAAATC 58.907 61.111 0.00 0.00 38.01 2.17
529 530 3.127533 GCAGCCCACGAGCGAAAT 61.128 61.111 0.00 0.00 38.01 2.17
530 531 4.617520 TGCAGCCCACGAGCGAAA 62.618 61.111 0.00 0.00 38.01 3.46
531 532 4.617520 TTGCAGCCCACGAGCGAA 62.618 61.111 0.00 0.00 38.01 4.70
542 543 1.372128 CGTTCAAAGGCCTTGCAGC 60.372 57.895 21.33 9.70 34.76 5.25
543 544 0.040067 GACGTTCAAAGGCCTTGCAG 60.040 55.000 21.33 12.60 34.76 4.41
544 545 1.781025 CGACGTTCAAAGGCCTTGCA 61.781 55.000 21.33 5.52 34.76 4.08
545 546 1.082104 CGACGTTCAAAGGCCTTGC 60.082 57.895 21.33 9.05 34.76 4.01
546 547 0.512952 CTCGACGTTCAAAGGCCTTG 59.487 55.000 21.33 13.47 36.25 3.61
547 548 1.228657 GCTCGACGTTCAAAGGCCTT 61.229 55.000 13.78 13.78 0.00 4.35
548 549 1.668151 GCTCGACGTTCAAAGGCCT 60.668 57.895 0.00 0.00 0.00 5.19
549 550 2.861006 GCTCGACGTTCAAAGGCC 59.139 61.111 0.00 0.00 0.00 5.19
550 551 2.470286 CGCTCGACGTTCAAAGGC 59.530 61.111 0.00 0.00 36.87 4.35
551 552 1.557443 AAGCGCTCGACGTTCAAAGG 61.557 55.000 12.06 0.00 46.11 3.11
552 553 0.232303 AAAGCGCTCGACGTTCAAAG 59.768 50.000 12.06 0.00 46.11 2.77
553 554 0.231279 GAAAGCGCTCGACGTTCAAA 59.769 50.000 12.06 0.00 46.11 2.69
554 555 0.596600 AGAAAGCGCTCGACGTTCAA 60.597 50.000 12.06 0.00 46.11 2.69
555 556 0.596600 AAGAAAGCGCTCGACGTTCA 60.597 50.000 12.06 0.00 46.11 3.18
556 557 0.179272 CAAGAAAGCGCTCGACGTTC 60.179 55.000 12.06 10.88 46.11 3.95
557 558 1.557443 CCAAGAAAGCGCTCGACGTT 61.557 55.000 12.06 0.00 46.11 3.99
558 559 2.022129 CCAAGAAAGCGCTCGACGT 61.022 57.895 12.06 0.19 46.11 4.34
560 561 0.667792 AGACCAAGAAAGCGCTCGAC 60.668 55.000 12.06 5.25 0.00 4.20
561 562 0.667487 CAGACCAAGAAAGCGCTCGA 60.667 55.000 12.06 0.00 0.00 4.04
562 563 0.946221 ACAGACCAAGAAAGCGCTCG 60.946 55.000 12.06 0.00 0.00 5.03
563 564 1.195674 GAACAGACCAAGAAAGCGCTC 59.804 52.381 12.06 0.00 0.00 5.03
564 565 1.230324 GAACAGACCAAGAAAGCGCT 58.770 50.000 2.64 2.64 0.00 5.92
565 566 0.238553 GGAACAGACCAAGAAAGCGC 59.761 55.000 0.00 0.00 0.00 5.92
566 567 1.264288 GTGGAACAGACCAAGAAAGCG 59.736 52.381 0.00 0.00 41.80 4.68
567 568 1.609072 GGTGGAACAGACCAAGAAAGC 59.391 52.381 0.00 0.00 41.80 3.51
568 569 1.873591 CGGTGGAACAGACCAAGAAAG 59.126 52.381 0.00 0.00 41.80 2.62
569 570 1.476110 CCGGTGGAACAGACCAAGAAA 60.476 52.381 0.00 0.00 41.80 2.52
570 571 0.107831 CCGGTGGAACAGACCAAGAA 59.892 55.000 0.00 0.00 41.80 2.52
571 572 1.752198 CCGGTGGAACAGACCAAGA 59.248 57.895 0.00 0.00 41.80 3.02
572 573 1.966451 GCCGGTGGAACAGACCAAG 60.966 63.158 1.90 0.00 41.80 3.61
573 574 2.112297 GCCGGTGGAACAGACCAA 59.888 61.111 1.90 0.00 41.80 3.67
574 575 3.948719 GGCCGGTGGAACAGACCA 61.949 66.667 1.90 0.00 41.80 4.02
575 576 3.948719 TGGCCGGTGGAACAGACC 61.949 66.667 1.90 0.00 41.80 3.85
576 577 2.668550 GTGGCCGGTGGAACAGAC 60.669 66.667 1.90 0.00 41.80 3.51
577 578 3.948719 GGTGGCCGGTGGAACAGA 61.949 66.667 1.90 0.00 41.80 3.41
590 591 4.201679 TCGCGCATCCTACGGTGG 62.202 66.667 8.75 0.00 0.00 4.61
591 592 2.655364 CTCGCGCATCCTACGGTG 60.655 66.667 8.75 0.00 0.00 4.94
592 593 3.900892 CCTCGCGCATCCTACGGT 61.901 66.667 8.75 0.00 0.00 4.83
593 594 4.647615 CCCTCGCGCATCCTACGG 62.648 72.222 8.75 0.00 0.00 4.02
594 595 3.592814 TCCCTCGCGCATCCTACG 61.593 66.667 8.75 0.00 0.00 3.51
595 596 2.027751 GTCCCTCGCGCATCCTAC 59.972 66.667 8.75 0.00 0.00 3.18
596 597 3.592814 CGTCCCTCGCGCATCCTA 61.593 66.667 8.75 0.00 0.00 2.94
599 600 3.825833 CTACCGTCCCTCGCGCATC 62.826 68.421 8.75 0.00 38.35 3.91
600 601 3.900892 CTACCGTCCCTCGCGCAT 61.901 66.667 8.75 0.00 38.35 4.73
603 604 2.703798 TTTCCTACCGTCCCTCGCG 61.704 63.158 0.00 0.00 38.35 5.87
604 605 1.153686 GTTTCCTACCGTCCCTCGC 60.154 63.158 0.00 0.00 38.35 5.03
605 606 1.138247 CGTTTCCTACCGTCCCTCG 59.862 63.158 0.00 0.00 39.52 4.63
606 607 1.066757 GATCGTTTCCTACCGTCCCTC 59.933 57.143 0.00 0.00 0.00 4.30
607 608 1.109609 GATCGTTTCCTACCGTCCCT 58.890 55.000 0.00 0.00 0.00 4.20
608 609 0.248784 CGATCGTTTCCTACCGTCCC 60.249 60.000 7.03 0.00 0.00 4.46
609 610 0.734889 TCGATCGTTTCCTACCGTCC 59.265 55.000 15.94 0.00 0.00 4.79
610 611 1.820092 GTCGATCGTTTCCTACCGTC 58.180 55.000 15.94 0.00 0.00 4.79
611 612 0.097674 CGTCGATCGTTTCCTACCGT 59.902 55.000 15.94 0.00 34.52 4.83
612 613 2.850831 CGTCGATCGTTTCCTACCG 58.149 57.895 15.94 2.47 34.52 4.02
622 623 2.024871 GCAGAGGGACGTCGATCG 59.975 66.667 9.36 9.36 46.00 3.69
623 624 1.064946 CTGCAGAGGGACGTCGATC 59.935 63.158 8.42 9.90 0.00 3.69
624 625 0.393944 TACTGCAGAGGGACGTCGAT 60.394 55.000 23.35 0.00 0.00 3.59
625 626 1.002990 TACTGCAGAGGGACGTCGA 60.003 57.895 23.35 0.00 0.00 4.20
626 627 1.136984 GTACTGCAGAGGGACGTCG 59.863 63.158 23.35 0.00 0.00 5.12
627 628 0.889306 AAGTACTGCAGAGGGACGTC 59.111 55.000 23.35 7.13 0.00 4.34
628 629 0.889306 GAAGTACTGCAGAGGGACGT 59.111 55.000 23.35 10.52 0.00 4.34
629 630 1.178276 AGAAGTACTGCAGAGGGACG 58.822 55.000 23.35 0.00 0.00 4.79
630 631 2.427812 GGTAGAAGTACTGCAGAGGGAC 59.572 54.545 23.35 12.27 32.90 4.46
631 632 2.312140 AGGTAGAAGTACTGCAGAGGGA 59.688 50.000 23.35 0.00 32.90 4.20
632 633 2.741145 AGGTAGAAGTACTGCAGAGGG 58.259 52.381 23.35 0.00 32.90 4.30
633 634 4.201930 CGTAAGGTAGAAGTACTGCAGAGG 60.202 50.000 23.35 0.00 32.90 3.69
634 635 4.395542 ACGTAAGGTAGAAGTACTGCAGAG 59.604 45.833 23.35 0.00 46.39 3.35
635 636 4.330250 ACGTAAGGTAGAAGTACTGCAGA 58.670 43.478 23.35 0.48 46.39 4.26
636 637 4.155462 TGACGTAAGGTAGAAGTACTGCAG 59.845 45.833 13.48 13.48 46.39 4.41
637 638 4.074259 TGACGTAAGGTAGAAGTACTGCA 58.926 43.478 3.00 0.00 46.39 4.41
638 639 4.394300 TCTGACGTAAGGTAGAAGTACTGC 59.606 45.833 0.00 0.00 46.39 4.40
639 640 5.445673 CGTCTGACGTAAGGTAGAAGTACTG 60.446 48.000 21.30 0.00 46.39 2.74
640 641 4.629200 CGTCTGACGTAAGGTAGAAGTACT 59.371 45.833 21.30 0.00 46.39 2.73
641 642 4.627467 TCGTCTGACGTAAGGTAGAAGTAC 59.373 45.833 27.16 0.00 43.14 2.73
642 643 4.820897 TCGTCTGACGTAAGGTAGAAGTA 58.179 43.478 27.16 2.87 43.14 2.24
643 644 3.668447 TCGTCTGACGTAAGGTAGAAGT 58.332 45.455 27.16 0.00 43.14 3.01
644 645 4.571580 AGATCGTCTGACGTAAGGTAGAAG 59.428 45.833 27.16 0.00 43.14 2.85
645 646 4.511527 AGATCGTCTGACGTAAGGTAGAA 58.488 43.478 27.16 7.44 43.14 2.10
646 647 4.134379 AGATCGTCTGACGTAAGGTAGA 57.866 45.455 27.16 8.15 43.14 2.59
656 657 5.646213 CGTAGTACGCCAGATCGTCTGAC 62.646 56.522 10.19 0.00 39.88 3.51
657 658 3.621222 CGTAGTACGCCAGATCGTCTGA 61.621 54.545 10.19 0.00 39.88 3.27
658 659 1.332993 CGTAGTACGCCAGATCGTCTG 60.333 57.143 10.19 7.72 43.15 3.51
659 660 0.935898 CGTAGTACGCCAGATCGTCT 59.064 55.000 10.19 0.00 43.15 4.18
660 661 3.434452 CGTAGTACGCCAGATCGTC 57.566 57.895 10.19 0.00 43.15 4.20
705 706 0.721154 GCTTTCGTCATCGATGCACA 59.279 50.000 20.81 0.28 45.65 4.57
806 2781 2.621338 TGCGAAGGACAATCATCAGAC 58.379 47.619 0.00 0.00 0.00 3.51
807 2782 3.461061 GATGCGAAGGACAATCATCAGA 58.539 45.455 0.00 0.00 35.06 3.27
808 2783 2.547211 GGATGCGAAGGACAATCATCAG 59.453 50.000 0.00 0.00 36.25 2.90
809 2784 2.564771 GGATGCGAAGGACAATCATCA 58.435 47.619 0.00 0.00 36.25 3.07
810 2785 1.528586 CGGATGCGAAGGACAATCATC 59.471 52.381 0.00 0.00 34.41 2.92
811 2786 1.138859 TCGGATGCGAAGGACAATCAT 59.861 47.619 6.93 0.00 0.00 2.45
845 2822 0.106708 AGTACGCATGGCATCGGATT 59.893 50.000 18.63 8.40 0.00 3.01
846 2823 0.966179 TAGTACGCATGGCATCGGAT 59.034 50.000 18.63 9.69 0.00 4.18
847 2824 0.031585 GTAGTACGCATGGCATCGGA 59.968 55.000 18.63 10.90 0.00 4.55
848 2825 0.249280 TGTAGTACGCATGGCATCGG 60.249 55.000 18.63 8.13 0.00 4.18
849 2826 1.131771 CTGTAGTACGCATGGCATCG 58.868 55.000 14.74 14.74 0.00 3.84
850 2827 2.225068 ACTGTAGTACGCATGGCATC 57.775 50.000 0.00 0.00 0.00 3.91
851 2828 2.691409 AACTGTAGTACGCATGGCAT 57.309 45.000 0.00 0.00 0.00 4.40
852 2829 3.596310 TTAACTGTAGTACGCATGGCA 57.404 42.857 0.00 0.00 0.00 4.92
853 2830 5.479716 AATTTAACTGTAGTACGCATGGC 57.520 39.130 0.00 0.00 0.00 4.40
854 2831 9.269415 GTAAAAATTTAACTGTAGTACGCATGG 57.731 33.333 0.00 0.00 0.00 3.66
855 2832 9.269415 GGTAAAAATTTAACTGTAGTACGCATG 57.731 33.333 0.00 0.00 0.00 4.06
856 2833 9.223099 AGGTAAAAATTTAACTGTAGTACGCAT 57.777 29.630 2.76 0.00 39.13 4.73
857 2834 8.606040 AGGTAAAAATTTAACTGTAGTACGCA 57.394 30.769 2.76 0.00 39.13 5.24
858 2835 8.171196 GGAGGTAAAAATTTAACTGTAGTACGC 58.829 37.037 8.14 0.00 40.58 4.42
859 2836 9.206870 TGGAGGTAAAAATTTAACTGTAGTACG 57.793 33.333 8.14 0.00 40.58 3.67
987 3097 1.442769 CGGCCATGGATATACAGTGC 58.557 55.000 18.40 3.39 0.00 4.40
989 3099 1.352083 AGCGGCCATGGATATACAGT 58.648 50.000 18.40 0.00 0.00 3.55
992 3109 2.076863 GTGAAGCGGCCATGGATATAC 58.923 52.381 18.40 0.00 0.00 1.47
994 3111 0.250901 GGTGAAGCGGCCATGGATAT 60.251 55.000 18.40 0.00 0.00 1.63
1110 3227 1.737008 GAAGAAGGTGACGGCGGAC 60.737 63.158 13.24 7.37 0.00 4.79
1866 4014 1.227497 GGCGATCTCTTCCAGCTGG 60.227 63.158 27.87 27.87 0.00 4.85
2109 6547 4.794648 TCGGCCGCCAATGGGAAG 62.795 66.667 23.51 0.00 35.59 3.46
2185 6623 2.094854 CCTTGTCAGCATCTTCTTTGGC 60.095 50.000 0.00 0.00 0.00 4.52
2242 6680 0.036010 ATCAACTCCCTCGCCAACAG 60.036 55.000 0.00 0.00 0.00 3.16
2396 6834 8.711457 GCAATGATTATATTTAACCACCATTGC 58.289 33.333 16.76 16.76 41.60 3.56
2831 7795 5.291371 GCGAGACTCCTAATGTTTTTACCTC 59.709 44.000 0.00 0.00 0.00 3.85
2839 7803 3.963428 AGTTGCGAGACTCCTAATGTT 57.037 42.857 0.00 0.00 0.00 2.71
2845 7809 4.683432 GCAAGTTGCGAGACTCCT 57.317 55.556 12.95 0.00 31.71 3.69
2884 7848 8.846607 CCAGAAATACGTATTTTGTAAGTTTGC 58.153 33.333 29.00 15.15 36.13 3.68
2885 7849 9.887406 ACCAGAAATACGTATTTTGTAAGTTTG 57.113 29.630 29.00 13.85 36.13 2.93
2892 7856 6.424509 TCGTGAACCAGAAATACGTATTTTGT 59.575 34.615 29.00 22.97 36.13 2.83
2903 7867 2.293399 GGCAAGTTCGTGAACCAGAAAT 59.707 45.455 9.03 0.00 42.06 2.17
2952 7916 4.933330 AGCACCTGATACAGTTACATACG 58.067 43.478 0.00 0.00 0.00 3.06
3191 8155 2.671396 CCGAAAATACTTGTGACGGGAG 59.329 50.000 0.00 0.00 36.08 4.30
3192 8156 2.299582 TCCGAAAATACTTGTGACGGGA 59.700 45.455 0.00 0.00 39.44 5.14
3193 8157 2.414138 GTCCGAAAATACTTGTGACGGG 59.586 50.000 0.00 0.00 39.44 5.28
3194 8158 2.091588 CGTCCGAAAATACTTGTGACGG 59.908 50.000 0.00 0.00 40.10 4.79
3195 8159 2.091588 CCGTCCGAAAATACTTGTGACG 59.908 50.000 0.00 0.00 42.55 4.35
3196 8160 3.319755 TCCGTCCGAAAATACTTGTGAC 58.680 45.455 0.00 0.00 0.00 3.67
3197 8161 3.256383 TCTCCGTCCGAAAATACTTGTGA 59.744 43.478 0.00 0.00 0.00 3.58
3198 8162 3.581755 TCTCCGTCCGAAAATACTTGTG 58.418 45.455 0.00 0.00 0.00 3.33
3199 8163 3.508793 TCTCTCCGTCCGAAAATACTTGT 59.491 43.478 0.00 0.00 0.00 3.16
3200 8164 4.106029 TCTCTCCGTCCGAAAATACTTG 57.894 45.455 0.00 0.00 0.00 3.16
3201 8165 3.762823 ACTCTCTCCGTCCGAAAATACTT 59.237 43.478 0.00 0.00 0.00 2.24
3202 8166 3.354467 ACTCTCTCCGTCCGAAAATACT 58.646 45.455 0.00 0.00 0.00 2.12
3203 8167 3.779271 ACTCTCTCCGTCCGAAAATAC 57.221 47.619 0.00 0.00 0.00 1.89
3204 8168 4.521146 AGTACTCTCTCCGTCCGAAAATA 58.479 43.478 0.00 0.00 0.00 1.40
3205 8169 3.354467 AGTACTCTCTCCGTCCGAAAAT 58.646 45.455 0.00 0.00 0.00 1.82
3206 8170 2.787994 AGTACTCTCTCCGTCCGAAAA 58.212 47.619 0.00 0.00 0.00 2.29
3207 8171 2.486472 AGTACTCTCTCCGTCCGAAA 57.514 50.000 0.00 0.00 0.00 3.46
3208 8172 3.529533 CTTAGTACTCTCTCCGTCCGAA 58.470 50.000 0.00 0.00 0.00 4.30
3209 8173 2.741228 GCTTAGTACTCTCTCCGTCCGA 60.741 54.545 0.00 0.00 0.00 4.55
3210 8174 1.598601 GCTTAGTACTCTCTCCGTCCG 59.401 57.143 0.00 0.00 0.00 4.79
3211 8175 2.641305 TGCTTAGTACTCTCTCCGTCC 58.359 52.381 0.00 0.00 0.00 4.79
3212 8176 4.096682 ACATTGCTTAGTACTCTCTCCGTC 59.903 45.833 0.00 0.00 0.00 4.79
3213 8177 4.017808 ACATTGCTTAGTACTCTCTCCGT 58.982 43.478 0.00 0.00 0.00 4.69
3214 8178 4.640789 ACATTGCTTAGTACTCTCTCCG 57.359 45.455 0.00 0.00 0.00 4.63
3215 8179 7.717568 TGATTACATTGCTTAGTACTCTCTCC 58.282 38.462 0.00 0.00 0.00 3.71
3307 8272 2.435805 CAAGCCTGCTAAGGTGGATAGA 59.564 50.000 0.00 0.00 46.43 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.