Multiple sequence alignment - TraesCS7B01G116100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G116100 chr7B 100.000 4879 0 0 1 4879 134627635 134632513 0.000000e+00 9010.0
1 TraesCS7B01G116100 chr7B 77.528 178 32 7 4589 4763 146901695 146901867 3.110000e-17 100.0
2 TraesCS7B01G116100 chr7A 95.417 2815 91 20 1583 4378 171433400 171436195 0.000000e+00 4449.0
3 TraesCS7B01G116100 chr7A 88.266 767 52 16 846 1578 171432404 171433166 0.000000e+00 883.0
4 TraesCS7B01G116100 chr7A 88.961 462 33 5 3925 4373 171552542 171552998 5.520000e-154 555.0
5 TraesCS7B01G116100 chr7A 92.328 378 26 3 3526 3901 171552117 171552493 7.190000e-148 534.0
6 TraesCS7B01G116100 chr7A 88.079 453 49 4 197 646 171416727 171417177 2.590000e-147 532.0
7 TraesCS7B01G116100 chr7A 86.090 266 35 2 4615 4879 490093943 490094207 7.990000e-73 285.0
8 TraesCS7B01G116100 chr7A 88.208 212 18 7 4410 4616 171944734 171944943 3.770000e-61 246.0
9 TraesCS7B01G116100 chr7A 90.374 187 15 3 30 215 171392303 171392487 4.880000e-60 243.0
10 TraesCS7B01G116100 chr7A 93.388 121 8 0 3409 3529 171551919 171552039 3.880000e-41 180.0
11 TraesCS7B01G116100 chr7A 89.844 128 7 5 705 829 171417178 171417302 5.050000e-35 159.0
12 TraesCS7B01G116100 chr7D 95.534 1769 59 11 2628 4384 169416541 169418301 0.000000e+00 2811.0
13 TraesCS7B01G116100 chr7D 91.001 1978 119 30 705 2644 169414517 169416473 0.000000e+00 2612.0
14 TraesCS7B01G116100 chr7D 87.652 907 65 26 3498 4373 169538235 169539125 0.000000e+00 1011.0
15 TraesCS7B01G116100 chr7D 91.983 474 30 4 3914 4384 169427840 169428308 0.000000e+00 658.0
16 TraesCS7B01G116100 chr7D 88.911 505 48 7 3506 4006 169480488 169480988 2.500000e-172 616.0
17 TraesCS7B01G116100 chr7D 85.312 497 66 5 143 634 169414019 169414513 1.570000e-139 507.0
18 TraesCS7B01G116100 chr7D 88.916 406 38 7 3506 3906 169427393 169427796 1.220000e-135 494.0
19 TraesCS7B01G116100 chr7D 88.235 238 21 6 4383 4616 169428358 169428592 1.340000e-70 278.0
20 TraesCS7B01G116100 chr7D 85.772 246 12 6 4389 4616 169418356 169418596 6.310000e-59 239.0
21 TraesCS7B01G116100 chr7D 92.517 147 7 3 4398 4541 169482856 169483001 1.780000e-49 207.0
22 TraesCS7B01G116100 chr7D 91.000 100 7 1 4287 4384 169481037 169481136 3.060000e-27 134.0
23 TraesCS7B01G116100 chr7D 97.143 35 0 1 643 677 72175941 72175908 1.900000e-04 58.4
24 TraesCS7B01G116100 chr6A 95.010 501 21 3 3409 3906 124314053 124313554 0.000000e+00 784.0
25 TraesCS7B01G116100 chr6A 93.305 463 27 3 3925 4384 124426695 124426234 0.000000e+00 680.0
26 TraesCS7B01G116100 chr6A 93.719 398 21 3 3925 4319 124913993 124914389 1.170000e-165 593.0
27 TraesCS7B01G116100 chr6A 88.452 407 41 4 3506 3906 124427148 124426742 2.040000e-133 486.0
28 TraesCS7B01G116100 chr6A 88.452 407 41 4 3506 3906 124913540 124913946 2.040000e-133 486.0
29 TraesCS7B01G116100 chr6A 93.785 177 9 2 4383 4559 124426185 124426011 1.040000e-66 265.0
30 TraesCS7B01G116100 chr6A 93.785 177 9 2 4383 4559 124914486 124914660 1.040000e-66 265.0
31 TraesCS7B01G116100 chrUn 87.457 582 43 19 3727 4278 293555437 293554856 1.140000e-180 643.0
32 TraesCS7B01G116100 chrUn 87.457 582 43 19 3727 4278 314488199 314487618 1.140000e-180 643.0
33 TraesCS7B01G116100 chrUn 88.961 462 33 5 3925 4373 82710485 82710941 5.520000e-154 555.0
34 TraesCS7B01G116100 chrUn 92.328 378 26 3 3526 3901 82710060 82710436 7.190000e-148 534.0
35 TraesCS7B01G116100 chrUn 88.208 212 18 7 4410 4616 293554586 293554377 3.770000e-61 246.0
36 TraesCS7B01G116100 chrUn 88.208 212 18 7 4410 4616 314487348 314487139 3.770000e-61 246.0
37 TraesCS7B01G116100 chrUn 88.208 212 18 7 4410 4616 325382386 325382595 3.770000e-61 246.0
38 TraesCS7B01G116100 chrUn 93.388 121 8 0 3409 3529 82709862 82709982 3.880000e-41 180.0
39 TraesCS7B01G116100 chrUn 81.871 171 31 0 256 426 40740767 40740597 1.420000e-30 145.0
40 TraesCS7B01G116100 chrUn 81.871 171 31 0 256 426 40747138 40747308 1.420000e-30 145.0
41 TraesCS7B01G116100 chrUn 81.871 171 31 0 256 426 303400321 303400151 1.420000e-30 145.0
42 TraesCS7B01G116100 chrUn 93.243 74 5 0 4304 4377 293554728 293554655 5.160000e-20 110.0
43 TraesCS7B01G116100 chr1B 94.776 268 13 1 4612 4879 509117027 509117293 2.720000e-112 416.0
44 TraesCS7B01G116100 chr1B 94.737 38 2 0 677 714 145722662 145722625 5.270000e-05 60.2
45 TraesCS7B01G116100 chr2A 91.414 198 16 1 4615 4812 715911952 715912148 2.240000e-68 270.0
46 TraesCS7B01G116100 chr3A 84.586 266 38 3 4615 4879 153499538 153499275 1.350000e-65 261.0
47 TraesCS7B01G116100 chr3A 87.097 62 7 1 647 707 67912179 67912118 8.760000e-08 69.4
48 TraesCS7B01G116100 chr5D 79.771 262 43 6 243 501 483708083 483707829 1.080000e-41 182.0
49 TraesCS7B01G116100 chr5D 78.431 204 34 7 284 484 452555810 452556006 1.840000e-24 124.0
50 TraesCS7B01G116100 chr5D 94.444 36 1 1 682 716 495349692 495349727 2.000000e-03 54.7
51 TraesCS7B01G116100 chr1D 82.394 142 16 4 359 498 52609537 52609671 1.110000e-21 115.0
52 TraesCS7B01G116100 chr1D 100.000 31 0 0 647 677 377800831 377800801 1.900000e-04 58.4
53 TraesCS7B01G116100 chr4D 76.050 238 41 6 262 498 736142 736364 5.160000e-20 110.0
54 TraesCS7B01G116100 chr1A 80.800 125 21 3 294 415 104243665 104243541 1.450000e-15 95.3
55 TraesCS7B01G116100 chr1A 100.000 34 0 0 4615 4648 562046831 562046864 4.080000e-06 63.9
56 TraesCS7B01G116100 chr1A 100.000 31 0 0 681 711 306121225 306121255 1.900000e-04 58.4
57 TraesCS7B01G116100 chr6B 100.000 34 0 0 644 677 439066060 439066027 4.080000e-06 63.9
58 TraesCS7B01G116100 chr6B 100.000 33 0 0 645 677 678330103 678330071 1.470000e-05 62.1
59 TraesCS7B01G116100 chr4A 84.507 71 3 5 640 707 596160755 596160820 4.080000e-06 63.9
60 TraesCS7B01G116100 chr5A 97.297 37 0 1 4615 4650 668577707 668577743 1.470000e-05 62.1
61 TraesCS7B01G116100 chr3D 100.000 33 0 0 682 714 596846519 596846487 1.470000e-05 62.1
62 TraesCS7B01G116100 chr3D 100.000 30 0 0 648 677 336805430 336805401 6.820000e-04 56.5
63 TraesCS7B01G116100 chr2B 97.222 36 1 0 4611 4646 665183510 665183545 1.470000e-05 62.1
64 TraesCS7B01G116100 chr2B 94.737 38 1 1 678 715 25276377 25276413 1.900000e-04 58.4
65 TraesCS7B01G116100 chr2B 97.059 34 1 0 642 675 787961756 787961723 1.900000e-04 58.4
66 TraesCS7B01G116100 chr2B 96.970 33 1 0 678 710 712760342 712760310 6.820000e-04 56.5
67 TraesCS7B01G116100 chr5B 100.000 31 0 0 682 712 457971022 457970992 1.900000e-04 58.4
68 TraesCS7B01G116100 chr5B 90.476 42 2 2 638 677 63635385 63635426 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G116100 chr7B 134627635 134632513 4878 False 9010.000000 9010 100.000000 1 4879 1 chr7B.!!$F1 4878
1 TraesCS7B01G116100 chr7A 171432404 171436195 3791 False 2666.000000 4449 91.841500 846 4378 2 chr7A.!!$F5 3532
2 TraesCS7B01G116100 chr7A 171551919 171552998 1079 False 423.000000 555 91.559000 3409 4373 3 chr7A.!!$F6 964
3 TraesCS7B01G116100 chr7A 171416727 171417302 575 False 345.500000 532 88.961500 197 829 2 chr7A.!!$F4 632
4 TraesCS7B01G116100 chr7D 169414019 169418596 4577 False 1542.250000 2811 89.404750 143 4616 4 chr7D.!!$F2 4473
5 TraesCS7B01G116100 chr7D 169538235 169539125 890 False 1011.000000 1011 87.652000 3498 4373 1 chr7D.!!$F1 875
6 TraesCS7B01G116100 chr7D 169427393 169428592 1199 False 476.666667 658 89.711333 3506 4616 3 chr7D.!!$F3 1110
7 TraesCS7B01G116100 chr7D 169480488 169483001 2513 False 319.000000 616 90.809333 3506 4541 3 chr7D.!!$F4 1035
8 TraesCS7B01G116100 chr6A 124426011 124427148 1137 True 477.000000 680 91.847333 3506 4559 3 chr6A.!!$R2 1053
9 TraesCS7B01G116100 chr6A 124913540 124914660 1120 False 448.000000 593 91.985333 3506 4559 3 chr6A.!!$F1 1053
10 TraesCS7B01G116100 chrUn 314487139 314488199 1060 True 444.500000 643 87.832500 3727 4616 2 chrUn.!!$R4 889
11 TraesCS7B01G116100 chrUn 82709862 82710941 1079 False 423.000000 555 91.559000 3409 4373 3 chrUn.!!$F3 964
12 TraesCS7B01G116100 chrUn 293554377 293555437 1060 True 333.000000 643 89.636000 3727 4616 3 chrUn.!!$R3 889

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.038067 CGGTTGTGGACGGACATACA 60.038 55.000 0.00 0.0 0.00 2.29 F
1430 1457 0.101219 GGTACGGACGTATTCGGCTT 59.899 55.000 7.89 0.0 45.51 4.35 F
1546 1598 0.541863 GGGGTGATGTCTTGTCGGAT 59.458 55.000 0.00 0.0 0.00 4.18 F
2850 3220 1.208293 CTGACCCTCCTTAGTGCCTTC 59.792 57.143 0.00 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1460 1493 0.029834 GAACAAGTGGTGTGCAGCAG 59.970 55.0 0.00 0.0 40.60 4.24 R
2288 2575 0.552615 ACCCAAACCCCCAGCTCTAT 60.553 55.0 0.00 0.0 0.00 1.98 R
3390 3764 1.031235 CGCCATGAATTACCCATGCA 58.969 50.0 0.00 0.0 39.89 3.96 R
4749 7197 0.032815 TGTGACGCGATTGTTCCAGA 59.967 50.0 15.93 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.194597 TGCCCTTGCCAACGACTT 59.805 55.556 0.00 0.00 36.33 3.01
18 19 1.454847 TGCCCTTGCCAACGACTTT 60.455 52.632 0.00 0.00 36.33 2.66
19 20 1.285950 GCCCTTGCCAACGACTTTC 59.714 57.895 0.00 0.00 0.00 2.62
20 21 1.574428 CCCTTGCCAACGACTTTCG 59.426 57.895 0.00 0.00 46.93 3.46
21 22 0.882927 CCCTTGCCAACGACTTTCGA 60.883 55.000 1.94 0.00 43.74 3.71
22 23 0.234884 CCTTGCCAACGACTTTCGAC 59.765 55.000 1.94 0.00 43.74 4.20
23 24 1.217882 CTTGCCAACGACTTTCGACT 58.782 50.000 1.94 0.00 43.74 4.18
24 25 0.934496 TTGCCAACGACTTTCGACTG 59.066 50.000 1.94 0.00 43.74 3.51
25 26 0.179094 TGCCAACGACTTTCGACTGT 60.179 50.000 1.94 0.00 43.74 3.55
26 27 0.935196 GCCAACGACTTTCGACTGTT 59.065 50.000 1.94 0.00 43.74 3.16
27 28 1.329599 GCCAACGACTTTCGACTGTTT 59.670 47.619 1.94 0.00 43.74 2.83
28 29 2.849502 GCCAACGACTTTCGACTGTTTG 60.850 50.000 1.94 0.00 43.74 2.93
29 30 2.605818 CCAACGACTTTCGACTGTTTGA 59.394 45.455 1.94 0.00 43.74 2.69
30 31 3.302480 CCAACGACTTTCGACTGTTTGAG 60.302 47.826 1.94 0.00 43.74 3.02
31 32 3.160777 ACGACTTTCGACTGTTTGAGT 57.839 42.857 1.94 0.00 43.74 3.41
32 33 3.518590 ACGACTTTCGACTGTTTGAGTT 58.481 40.909 1.94 0.00 43.74 3.01
33 34 3.306166 ACGACTTTCGACTGTTTGAGTTG 59.694 43.478 1.94 0.00 43.74 3.16
34 35 3.306166 CGACTTTCGACTGTTTGAGTTGT 59.694 43.478 0.00 0.00 43.74 3.32
35 36 4.578601 GACTTTCGACTGTTTGAGTTGTG 58.421 43.478 0.00 0.00 37.36 3.33
36 37 3.181510 ACTTTCGACTGTTTGAGTTGTGC 60.182 43.478 0.00 0.00 37.36 4.57
37 38 0.927537 TCGACTGTTTGAGTTGTGCG 59.072 50.000 0.00 0.00 37.36 5.34
38 39 0.042188 CGACTGTTTGAGTTGTGCGG 60.042 55.000 0.00 0.00 33.83 5.69
39 40 1.014352 GACTGTTTGAGTTGTGCGGT 58.986 50.000 0.00 0.00 33.83 5.68
40 41 2.206750 GACTGTTTGAGTTGTGCGGTA 58.793 47.619 0.00 0.00 33.83 4.02
41 42 2.210116 ACTGTTTGAGTTGTGCGGTAG 58.790 47.619 0.00 0.00 0.00 3.18
42 43 2.210116 CTGTTTGAGTTGTGCGGTAGT 58.790 47.619 0.00 0.00 0.00 2.73
43 44 2.612212 CTGTTTGAGTTGTGCGGTAGTT 59.388 45.455 0.00 0.00 0.00 2.24
44 45 2.610374 TGTTTGAGTTGTGCGGTAGTTC 59.390 45.455 0.00 0.00 0.00 3.01
45 46 2.605837 TTGAGTTGTGCGGTAGTTCA 57.394 45.000 0.00 0.00 0.00 3.18
46 47 2.831685 TGAGTTGTGCGGTAGTTCAT 57.168 45.000 0.00 0.00 0.00 2.57
47 48 2.412870 TGAGTTGTGCGGTAGTTCATG 58.587 47.619 0.00 0.00 0.00 3.07
48 49 2.224185 TGAGTTGTGCGGTAGTTCATGT 60.224 45.455 0.00 0.00 0.00 3.21
49 50 2.806244 GAGTTGTGCGGTAGTTCATGTT 59.194 45.455 0.00 0.00 0.00 2.71
50 51 2.806244 AGTTGTGCGGTAGTTCATGTTC 59.194 45.455 0.00 0.00 0.00 3.18
51 52 2.535012 TGTGCGGTAGTTCATGTTCA 57.465 45.000 0.00 0.00 0.00 3.18
52 53 2.139917 TGTGCGGTAGTTCATGTTCAC 58.860 47.619 0.00 0.00 0.00 3.18
53 54 2.139917 GTGCGGTAGTTCATGTTCACA 58.860 47.619 0.00 0.00 0.00 3.58
54 55 2.546368 GTGCGGTAGTTCATGTTCACAA 59.454 45.455 0.00 0.00 0.00 3.33
55 56 2.805671 TGCGGTAGTTCATGTTCACAAG 59.194 45.455 0.00 0.00 0.00 3.16
56 57 2.412847 GCGGTAGTTCATGTTCACAAGC 60.413 50.000 0.00 0.00 0.00 4.01
57 58 2.805671 CGGTAGTTCATGTTCACAAGCA 59.194 45.455 0.00 0.00 0.00 3.91
58 59 3.436704 CGGTAGTTCATGTTCACAAGCAT 59.563 43.478 0.00 0.00 0.00 3.79
59 60 4.669965 CGGTAGTTCATGTTCACAAGCATG 60.670 45.833 0.00 0.00 42.62 4.06
60 61 3.928727 AGTTCATGTTCACAAGCATGG 57.071 42.857 0.00 0.00 41.83 3.66
61 62 2.029649 AGTTCATGTTCACAAGCATGGC 60.030 45.455 0.00 0.00 41.83 4.40
62 63 1.913778 TCATGTTCACAAGCATGGCT 58.086 45.000 0.00 0.00 41.83 4.75
74 75 2.528564 AGCATGGCTTTGGTTACATGT 58.471 42.857 2.69 2.69 41.94 3.21
75 76 2.899256 AGCATGGCTTTGGTTACATGTT 59.101 40.909 2.30 0.00 41.94 2.71
76 77 4.085733 AGCATGGCTTTGGTTACATGTTA 58.914 39.130 2.30 0.00 41.94 2.41
77 78 4.158394 AGCATGGCTTTGGTTACATGTTAG 59.842 41.667 2.30 0.00 41.94 2.34
78 79 4.157656 GCATGGCTTTGGTTACATGTTAGA 59.842 41.667 2.30 0.00 41.94 2.10
79 80 5.163519 GCATGGCTTTGGTTACATGTTAGAT 60.164 40.000 2.30 0.00 41.94 1.98
80 81 5.895636 TGGCTTTGGTTACATGTTAGATG 57.104 39.130 2.30 0.00 0.00 2.90
81 82 5.321102 TGGCTTTGGTTACATGTTAGATGT 58.679 37.500 2.30 0.00 36.13 3.06
82 83 5.414454 TGGCTTTGGTTACATGTTAGATGTC 59.586 40.000 2.30 0.00 33.76 3.06
83 84 5.163652 GGCTTTGGTTACATGTTAGATGTCC 60.164 44.000 2.30 0.00 33.76 4.02
84 85 5.414454 GCTTTGGTTACATGTTAGATGTCCA 59.586 40.000 2.30 0.00 33.76 4.02
85 86 6.095440 GCTTTGGTTACATGTTAGATGTCCAT 59.905 38.462 2.30 0.00 33.76 3.41
86 87 7.624360 TTTGGTTACATGTTAGATGTCCATC 57.376 36.000 2.30 0.00 38.09 3.51
87 88 6.306643 TGGTTACATGTTAGATGTCCATCA 57.693 37.500 2.30 0.00 40.22 3.07
88 89 6.716284 TGGTTACATGTTAGATGTCCATCAA 58.284 36.000 2.30 0.31 40.22 2.57
89 90 6.823182 TGGTTACATGTTAGATGTCCATCAAG 59.177 38.462 2.30 0.00 40.22 3.02
90 91 6.260936 GGTTACATGTTAGATGTCCATCAAGG 59.739 42.308 2.30 0.00 40.22 3.61
91 92 5.698741 ACATGTTAGATGTCCATCAAGGA 57.301 39.130 9.76 0.00 46.75 3.36
100 101 1.825090 TCCATCAAGGACATGTGCAC 58.175 50.000 20.21 10.75 43.07 4.57
101 102 0.448990 CCATCAAGGACATGTGCACG 59.551 55.000 20.21 9.75 41.22 5.34
102 103 0.448990 CATCAAGGACATGTGCACGG 59.551 55.000 20.21 9.62 0.00 4.94
103 104 1.308069 ATCAAGGACATGTGCACGGC 61.308 55.000 20.21 0.00 0.00 5.68
104 105 2.672996 AAGGACATGTGCACGGCC 60.673 61.111 20.21 10.66 0.00 6.13
108 109 4.947147 ACATGTGCACGGCCGGTT 62.947 61.111 31.76 6.18 0.00 4.44
109 110 4.403137 CATGTGCACGGCCGGTTG 62.403 66.667 31.76 20.95 0.00 3.77
110 111 4.947147 ATGTGCACGGCCGGTTGT 62.947 61.111 31.76 4.77 0.00 3.32
122 123 2.745728 CGGTTGTGGACGGACATAC 58.254 57.895 0.00 0.00 0.00 2.39
123 124 0.038067 CGGTTGTGGACGGACATACA 60.038 55.000 0.00 0.00 0.00 2.29
124 125 1.404986 CGGTTGTGGACGGACATACAT 60.405 52.381 0.00 0.00 0.00 2.29
125 126 2.006888 GGTTGTGGACGGACATACATG 58.993 52.381 0.00 0.00 0.00 3.21
126 127 2.614481 GGTTGTGGACGGACATACATGT 60.614 50.000 2.69 2.69 45.16 3.21
147 148 9.346005 ACATGTCAGATAATAGCATCAATTTCA 57.654 29.630 0.00 0.00 0.00 2.69
161 162 9.813446 AGCATCAATTTCAATTTCTTATCTTCC 57.187 29.630 0.00 0.00 0.00 3.46
244 247 5.545658 AAAATTACACATGCTCACCTACG 57.454 39.130 0.00 0.00 0.00 3.51
260 264 2.223502 CCTACGCACATACACTCATCGT 60.224 50.000 0.00 0.00 0.00 3.73
265 269 3.733988 CGCACATACACTCATCGTACCTT 60.734 47.826 0.00 0.00 0.00 3.50
278 282 4.585955 TCGTACCTTTATGAGCATCTCC 57.414 45.455 0.00 0.00 34.92 3.71
283 287 3.900601 ACCTTTATGAGCATCTCCGAGAT 59.099 43.478 4.96 4.96 34.74 2.75
305 309 1.796796 GAGCCGGCACAACATCTTC 59.203 57.895 31.54 10.29 0.00 2.87
313 317 3.376234 CGGCACAACATCTTCAGATTGAT 59.624 43.478 0.00 0.00 31.21 2.57
335 339 1.233019 AGTCATCATATGCGCCTTGC 58.767 50.000 4.18 0.00 46.70 4.01
378 382 1.127766 CAATGAACGAACATCGCCGAA 59.872 47.619 0.00 0.00 45.12 4.30
427 432 4.372656 GAGCACAAGTGTCAAGTCTAGTT 58.627 43.478 1.79 0.00 0.00 2.24
486 491 3.340814 ACAAGTAACCATCTGAGCCAG 57.659 47.619 0.00 0.00 0.00 4.85
513 518 3.853671 GGTTCGCAAATGTCTTAGCATTG 59.146 43.478 3.46 0.00 38.87 2.82
524 529 6.384258 TGTCTTAGCATTGTTGTTTTGCTA 57.616 33.333 0.00 0.00 44.51 3.49
525 530 6.437928 TGTCTTAGCATTGTTGTTTTGCTAG 58.562 36.000 4.31 0.00 46.36 3.42
527 532 3.030668 AGCATTGTTGTTTTGCTAGGC 57.969 42.857 0.00 0.00 44.51 3.93
580 585 9.838339 TTCTTATTCTTCTCTTTGTCTTTCTGT 57.162 29.630 0.00 0.00 0.00 3.41
598 605 2.552315 CTGTCCGTGCACCTAAAATGTT 59.448 45.455 12.15 0.00 0.00 2.71
604 611 4.499019 CCGTGCACCTAAAATGTTTTGACT 60.499 41.667 12.15 0.00 0.00 3.41
638 645 3.360249 GCATTGTTGCTGAGTTTGAGT 57.640 42.857 0.00 0.00 45.77 3.41
639 646 3.303406 GCATTGTTGCTGAGTTTGAGTC 58.697 45.455 0.00 0.00 45.77 3.36
640 647 3.004106 GCATTGTTGCTGAGTTTGAGTCT 59.996 43.478 0.00 0.00 45.77 3.24
641 648 4.214119 GCATTGTTGCTGAGTTTGAGTCTA 59.786 41.667 0.00 0.00 45.77 2.59
642 649 5.277974 GCATTGTTGCTGAGTTTGAGTCTAA 60.278 40.000 0.00 0.00 45.77 2.10
643 650 6.569226 GCATTGTTGCTGAGTTTGAGTCTAAT 60.569 38.462 0.00 0.00 45.77 1.73
644 651 6.942532 TTGTTGCTGAGTTTGAGTCTAATT 57.057 33.333 0.00 0.00 0.00 1.40
645 652 6.942532 TGTTGCTGAGTTTGAGTCTAATTT 57.057 33.333 0.00 0.00 0.00 1.82
646 653 8.445275 TTGTTGCTGAGTTTGAGTCTAATTTA 57.555 30.769 0.00 0.00 0.00 1.40
647 654 8.621532 TGTTGCTGAGTTTGAGTCTAATTTAT 57.378 30.769 0.00 0.00 0.00 1.40
648 655 9.719355 TGTTGCTGAGTTTGAGTCTAATTTATA 57.281 29.630 0.00 0.00 0.00 0.98
649 656 9.974750 GTTGCTGAGTTTGAGTCTAATTTATAC 57.025 33.333 0.00 0.00 0.00 1.47
650 657 9.944376 TTGCTGAGTTTGAGTCTAATTTATACT 57.056 29.630 0.00 0.00 0.00 2.12
659 666 8.388484 TGAGTCTAATTTATACTACTCCGTCC 57.612 38.462 0.00 0.00 33.94 4.79
660 667 7.446625 TGAGTCTAATTTATACTACTCCGTCCC 59.553 40.741 0.00 0.00 33.94 4.46
661 668 7.293073 AGTCTAATTTATACTACTCCGTCCCA 58.707 38.462 0.00 0.00 0.00 4.37
662 669 7.949006 AGTCTAATTTATACTACTCCGTCCCAT 59.051 37.037 0.00 0.00 0.00 4.00
663 670 9.236006 GTCTAATTTATACTACTCCGTCCCATA 57.764 37.037 0.00 0.00 0.00 2.74
664 671 9.812347 TCTAATTTATACTACTCCGTCCCATAA 57.188 33.333 0.00 0.00 0.00 1.90
667 674 7.844493 TTTATACTACTCCGTCCCATAATGT 57.156 36.000 0.00 0.00 0.00 2.71
668 675 8.938801 TTTATACTACTCCGTCCCATAATGTA 57.061 34.615 0.00 0.00 0.00 2.29
669 676 8.938801 TTATACTACTCCGTCCCATAATGTAA 57.061 34.615 0.00 0.00 0.00 2.41
670 677 5.786264 ACTACTCCGTCCCATAATGTAAG 57.214 43.478 0.00 0.00 0.00 2.34
671 678 5.452255 ACTACTCCGTCCCATAATGTAAGA 58.548 41.667 0.00 0.00 0.00 2.10
672 679 4.667519 ACTCCGTCCCATAATGTAAGAC 57.332 45.455 0.00 0.00 0.00 3.01
674 681 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
675 682 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
676 683 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
677 684 5.126869 TCCGTCCCATAATGTAAGACGTTTA 59.873 40.000 9.63 0.00 46.62 2.01
678 685 5.811613 CCGTCCCATAATGTAAGACGTTTAA 59.188 40.000 9.63 0.00 46.62 1.52
679 686 6.237915 CCGTCCCATAATGTAAGACGTTTAAC 60.238 42.308 9.63 0.00 46.62 2.01
680 687 9.288309 CCGTCCCATAATGTAAGACGTTTAACG 62.288 44.444 16.31 16.31 46.62 3.18
757 764 1.490490 TGAGCCCTATGCCCTTACAAG 59.510 52.381 0.00 0.00 42.71 3.16
761 768 2.373502 GCCCTATGCCCTTACAAGATCT 59.626 50.000 0.00 0.00 0.00 2.75
763 770 4.323104 GCCCTATGCCCTTACAAGATCTAG 60.323 50.000 0.00 0.00 0.00 2.43
799 807 9.460906 GTATTTTTACCACGTTTATGAAAACCA 57.539 29.630 0.00 0.00 41.68 3.67
929 945 2.825836 GGGTCCTGCTTCGCCATG 60.826 66.667 0.00 0.00 0.00 3.66
930 946 2.045926 GGTCCTGCTTCGCCATGT 60.046 61.111 0.00 0.00 0.00 3.21
931 947 1.220749 GGTCCTGCTTCGCCATGTA 59.779 57.895 0.00 0.00 0.00 2.29
932 948 1.090052 GGTCCTGCTTCGCCATGTAC 61.090 60.000 0.00 0.00 0.00 2.90
933 949 0.108138 GTCCTGCTTCGCCATGTACT 60.108 55.000 0.00 0.00 0.00 2.73
968 989 4.577246 CAGCGCCCCTAGCTCGAC 62.577 72.222 2.29 0.00 44.06 4.20
973 994 2.124236 CCCCTAGCTCGACCGTCT 60.124 66.667 0.00 0.00 0.00 4.18
1143 1164 2.689034 CACCTCCTCCTGTCCCCC 60.689 72.222 0.00 0.00 0.00 5.40
1232 1253 4.649705 TGAGGGCGAGGGGTGGAA 62.650 66.667 0.00 0.00 0.00 3.53
1356 1383 2.388232 GCGGAAGGCGACGTCATTT 61.388 57.895 17.16 6.13 40.97 2.32
1430 1457 0.101219 GGTACGGACGTATTCGGCTT 59.899 55.000 7.89 0.00 45.51 4.35
1460 1493 6.998802 ACCTGTATTTCTGATATCTACTGCC 58.001 40.000 3.98 0.00 0.00 4.85
1514 1547 2.286121 AAATGGCGAGGGGAGGGA 60.286 61.111 0.00 0.00 0.00 4.20
1516 1549 1.999634 AAATGGCGAGGGGAGGGATG 62.000 60.000 0.00 0.00 0.00 3.51
1519 1552 3.083997 GCGAGGGGAGGGATGTGT 61.084 66.667 0.00 0.00 0.00 3.72
1520 1553 2.670148 GCGAGGGGAGGGATGTGTT 61.670 63.158 0.00 0.00 0.00 3.32
1521 1554 1.335132 GCGAGGGGAGGGATGTGTTA 61.335 60.000 0.00 0.00 0.00 2.41
1523 1556 2.605257 CGAGGGGAGGGATGTGTTATA 58.395 52.381 0.00 0.00 0.00 0.98
1540 1592 5.760253 GTGTTATATCTGGGGTGATGTCTTG 59.240 44.000 0.00 0.00 0.00 3.02
1546 1598 0.541863 GGGGTGATGTCTTGTCGGAT 59.458 55.000 0.00 0.00 0.00 4.18
1600 1881 4.220693 AGAATTGTGTACCTGCATGCTA 57.779 40.909 20.33 4.40 0.00 3.49
1601 1882 4.194640 AGAATTGTGTACCTGCATGCTAG 58.805 43.478 20.33 13.98 0.00 3.42
1602 1883 3.634397 ATTGTGTACCTGCATGCTAGT 57.366 42.857 20.33 17.71 0.00 2.57
1603 1884 3.417069 TTGTGTACCTGCATGCTAGTT 57.583 42.857 20.33 5.87 0.00 2.24
1610 1891 2.834549 ACCTGCATGCTAGTTAGTCAGT 59.165 45.455 20.33 3.68 0.00 3.41
1622 1903 7.176165 TGCTAGTTAGTCAGTTAGTGTACATGT 59.824 37.037 2.69 2.69 0.00 3.21
1716 1997 8.798859 ATGGAGATATCAGGTATTAATTGTGC 57.201 34.615 5.32 0.00 0.00 4.57
1717 1998 6.873605 TGGAGATATCAGGTATTAATTGTGCG 59.126 38.462 5.32 0.00 0.00 5.34
1718 1999 7.097192 GGAGATATCAGGTATTAATTGTGCGA 58.903 38.462 5.32 0.00 0.00 5.10
1719 2000 7.766278 GGAGATATCAGGTATTAATTGTGCGAT 59.234 37.037 5.32 0.00 0.00 4.58
1723 2004 9.719355 ATATCAGGTATTAATTGTGCGATTACA 57.281 29.630 0.00 0.00 0.00 2.41
1752 2036 5.588240 TCTCACATAATATTGTCGCGAACT 58.412 37.500 12.06 0.09 0.00 3.01
1759 2043 5.545658 AATATTGTCGCGAACTTGTTCAT 57.454 34.783 12.06 0.00 0.00 2.57
1770 2054 7.810759 TCGCGAACTTGTTCATTATATGCTATA 59.189 33.333 6.20 0.00 0.00 1.31
1804 2089 3.130869 TGTGCATACCTTTTCATGGATGC 59.869 43.478 0.00 0.00 37.96 3.91
1856 2141 6.461640 CATGCCAATTCTCCTCTTTTTCTTT 58.538 36.000 0.00 0.00 0.00 2.52
1857 2142 7.605449 CATGCCAATTCTCCTCTTTTTCTTTA 58.395 34.615 0.00 0.00 0.00 1.85
1858 2143 7.781324 TGCCAATTCTCCTCTTTTTCTTTAT 57.219 32.000 0.00 0.00 0.00 1.40
1859 2144 8.877864 TGCCAATTCTCCTCTTTTTCTTTATA 57.122 30.769 0.00 0.00 0.00 0.98
1947 2232 6.060788 AGAATAGAAGTCCATGCTCCATTTC 58.939 40.000 0.00 0.00 0.00 2.17
1964 2249 5.830457 TCCATTTCCCGATTATTGCACATAA 59.170 36.000 0.00 0.00 0.00 1.90
2055 2342 1.895020 AATTCGCACCTCGCTACCCA 61.895 55.000 0.00 0.00 39.08 4.51
2081 2368 7.744087 TTTTAAATGTGATGAGTACTGCTGT 57.256 32.000 0.00 0.66 0.00 4.40
2114 2401 6.882656 TGTCTGAGATTTTCTCCTGAATAGG 58.117 40.000 2.26 0.00 42.73 2.57
2120 2407 2.996249 TTCTCCTGAATAGGCAGCTG 57.004 50.000 10.11 10.11 44.22 4.24
2125 2412 4.080129 TCTCCTGAATAGGCAGCTGAATTT 60.080 41.667 20.43 4.53 44.22 1.82
2126 2413 3.949754 TCCTGAATAGGCAGCTGAATTTG 59.050 43.478 20.43 9.95 44.22 2.32
2128 2415 4.400251 CCTGAATAGGCAGCTGAATTTGAA 59.600 41.667 20.43 0.00 37.25 2.69
2288 2575 3.162147 TGCAAGTTGTTATTAGGGGCA 57.838 42.857 4.48 0.00 0.00 5.36
2634 2921 2.031683 GGTCCACAAGTTTGTCTGAACG 59.968 50.000 0.00 0.00 39.91 3.95
2850 3220 1.208293 CTGACCCTCCTTAGTGCCTTC 59.792 57.143 0.00 0.00 0.00 3.46
2947 3317 6.127168 TGTTGGATGTCAGGTTAGTTATCGAT 60.127 38.462 2.16 2.16 0.00 3.59
2985 3356 7.596248 GCTTCTCTTGCATTTATCACTGAAAAA 59.404 33.333 0.00 0.00 0.00 1.94
3246 3618 6.833416 AGTAACTAATCTTGCCATGCCAATTA 59.167 34.615 0.00 0.00 0.00 1.40
3255 3627 4.757594 TGCCATGCCAATTATTTTCAGTC 58.242 39.130 0.00 0.00 0.00 3.51
3264 3636 7.039853 TGCCAATTATTTTCAGTCTGATGTCAA 60.040 33.333 2.68 0.00 0.00 3.18
3398 3772 1.256812 GGTGCTACTTTTGCATGGGT 58.743 50.000 0.00 0.00 42.69 4.51
3516 3890 6.974048 TCTGCATTACGAATTTTCAATGATGG 59.026 34.615 9.67 2.11 31.44 3.51
3635 4094 8.682936 ACAAATAATCTGAGAATATGTGGGTC 57.317 34.615 11.37 0.00 0.00 4.46
3822 4356 3.181465 CGGTAGCTTGATGGTTCAGGTAT 60.181 47.826 0.00 0.00 31.82 2.73
4065 4658 2.359602 CACTGGTGGCCTGAGCAG 60.360 66.667 18.09 18.09 45.23 4.24
4210 4804 9.917887 ATCCTTCTTTCTCTCAATGTAAATCAT 57.082 29.630 0.00 0.00 38.57 2.45
4379 5097 3.194329 TGAGATCAGAACTGCACCTAGTG 59.806 47.826 0.00 0.00 36.51 2.74
4395 5164 2.264124 GTGTGCTCACGGGAGTAGA 58.736 57.895 17.64 7.70 44.67 2.59
4406 6830 6.993308 GCTCACGGGAGTAGATATATATCTCA 59.007 42.308 25.25 11.64 44.67 3.27
4460 6884 3.262915 AGGAGCAAGAAGTAGAGCAACAT 59.737 43.478 0.00 0.00 0.00 2.71
4487 6914 2.294233 GCTTTCATGAACAAGTGGAGCA 59.706 45.455 17.17 0.00 0.00 4.26
4541 6986 5.281037 CCTTGTACCCCTTTCAACTCCTATT 60.281 44.000 0.00 0.00 0.00 1.73
4566 7011 2.923605 GCAATGACATGCAAGCTTTCGT 60.924 45.455 0.00 0.00 45.70 3.85
4575 7020 2.225491 TGCAAGCTTTCGTGTATTCACC 59.775 45.455 0.00 0.00 41.09 4.02
4581 7027 5.519722 AGCTTTCGTGTATTCACCAAAAAG 58.480 37.500 11.82 11.82 41.09 2.27
4655 7103 7.254227 AGTGTACGAGTTTTGAATTAAAGCA 57.746 32.000 0.00 0.00 32.53 3.91
4656 7104 7.699566 AGTGTACGAGTTTTGAATTAAAGCAA 58.300 30.769 0.00 0.00 32.53 3.91
4657 7105 7.642586 AGTGTACGAGTTTTGAATTAAAGCAAC 59.357 33.333 0.00 0.00 32.53 4.17
4658 7106 7.429920 GTGTACGAGTTTTGAATTAAAGCAACA 59.570 33.333 0.00 0.00 32.53 3.33
4659 7107 7.642194 TGTACGAGTTTTGAATTAAAGCAACAG 59.358 33.333 0.00 0.00 32.53 3.16
4660 7108 5.458779 ACGAGTTTTGAATTAAAGCAACAGC 59.541 36.000 0.00 0.00 32.53 4.40
4661 7109 5.458452 CGAGTTTTGAATTAAAGCAACAGCA 59.542 36.000 0.00 0.00 32.53 4.41
4662 7110 6.560251 CGAGTTTTGAATTAAAGCAACAGCAC 60.560 38.462 0.00 0.00 32.53 4.40
4663 7111 5.231991 AGTTTTGAATTAAAGCAACAGCACG 59.768 36.000 0.00 0.00 32.53 5.34
4664 7112 4.560136 TTGAATTAAAGCAACAGCACGA 57.440 36.364 0.00 0.00 0.00 4.35
4665 7113 4.764679 TGAATTAAAGCAACAGCACGAT 57.235 36.364 0.00 0.00 0.00 3.73
4666 7114 4.722194 TGAATTAAAGCAACAGCACGATC 58.278 39.130 0.00 0.00 0.00 3.69
4667 7115 3.764885 ATTAAAGCAACAGCACGATCC 57.235 42.857 0.00 0.00 0.00 3.36
4668 7116 2.472695 TAAAGCAACAGCACGATCCT 57.527 45.000 0.00 0.00 0.00 3.24
4669 7117 2.472695 AAAGCAACAGCACGATCCTA 57.527 45.000 0.00 0.00 0.00 2.94
4670 7118 2.698855 AAGCAACAGCACGATCCTAT 57.301 45.000 0.00 0.00 0.00 2.57
4671 7119 2.231215 AGCAACAGCACGATCCTATC 57.769 50.000 0.00 0.00 0.00 2.08
4672 7120 1.202580 AGCAACAGCACGATCCTATCC 60.203 52.381 0.00 0.00 0.00 2.59
4673 7121 1.491670 CAACAGCACGATCCTATCCG 58.508 55.000 0.00 0.00 0.00 4.18
4674 7122 1.112113 AACAGCACGATCCTATCCGT 58.888 50.000 0.00 0.00 39.88 4.69
4675 7123 1.112113 ACAGCACGATCCTATCCGTT 58.888 50.000 0.00 0.00 36.83 4.44
4676 7124 1.202417 ACAGCACGATCCTATCCGTTG 60.202 52.381 0.00 0.00 36.83 4.10
4677 7125 0.389391 AGCACGATCCTATCCGTTGG 59.611 55.000 0.00 0.00 36.83 3.77
4678 7126 0.104304 GCACGATCCTATCCGTTGGT 59.896 55.000 0.00 0.00 36.83 3.67
4679 7127 1.868519 GCACGATCCTATCCGTTGGTC 60.869 57.143 0.00 0.00 36.83 4.02
4680 7128 1.681793 CACGATCCTATCCGTTGGTCT 59.318 52.381 0.00 0.00 36.83 3.85
4681 7129 1.955080 ACGATCCTATCCGTTGGTCTC 59.045 52.381 0.00 0.00 35.21 3.36
4682 7130 1.954382 CGATCCTATCCGTTGGTCTCA 59.046 52.381 0.00 0.00 0.00 3.27
4683 7131 2.558795 CGATCCTATCCGTTGGTCTCAT 59.441 50.000 0.00 0.00 0.00 2.90
4684 7132 3.756963 CGATCCTATCCGTTGGTCTCATA 59.243 47.826 0.00 0.00 0.00 2.15
4685 7133 4.217767 CGATCCTATCCGTTGGTCTCATAA 59.782 45.833 0.00 0.00 0.00 1.90
4686 7134 5.278808 CGATCCTATCCGTTGGTCTCATAAA 60.279 44.000 0.00 0.00 0.00 1.40
4687 7135 6.572509 CGATCCTATCCGTTGGTCTCATAAAT 60.573 42.308 0.00 0.00 0.00 1.40
4688 7136 6.097915 TCCTATCCGTTGGTCTCATAAATC 57.902 41.667 0.00 0.00 0.00 2.17
4689 7137 5.839063 TCCTATCCGTTGGTCTCATAAATCT 59.161 40.000 0.00 0.00 0.00 2.40
4690 7138 7.008332 TCCTATCCGTTGGTCTCATAAATCTA 58.992 38.462 0.00 0.00 0.00 1.98
4691 7139 7.507956 TCCTATCCGTTGGTCTCATAAATCTAA 59.492 37.037 0.00 0.00 0.00 2.10
4692 7140 7.815068 CCTATCCGTTGGTCTCATAAATCTAAG 59.185 40.741 0.00 0.00 0.00 2.18
4693 7141 5.914033 TCCGTTGGTCTCATAAATCTAAGG 58.086 41.667 0.00 0.00 0.00 2.69
4694 7142 5.057149 CCGTTGGTCTCATAAATCTAAGGG 58.943 45.833 0.00 0.00 0.00 3.95
4695 7143 5.396436 CCGTTGGTCTCATAAATCTAAGGGT 60.396 44.000 0.00 0.00 0.00 4.34
4696 7144 6.113411 CGTTGGTCTCATAAATCTAAGGGTT 58.887 40.000 0.00 0.00 0.00 4.11
4697 7145 6.037172 CGTTGGTCTCATAAATCTAAGGGTTG 59.963 42.308 0.00 0.00 0.00 3.77
4698 7146 6.884472 TGGTCTCATAAATCTAAGGGTTGA 57.116 37.500 0.00 0.00 0.00 3.18
4699 7147 6.889198 TGGTCTCATAAATCTAAGGGTTGAG 58.111 40.000 0.00 0.00 0.00 3.02
4700 7148 6.672218 TGGTCTCATAAATCTAAGGGTTGAGA 59.328 38.462 0.00 0.00 36.65 3.27
4702 7150 7.979786 TCTCATAAATCTAAGGGTTGAGACT 57.020 36.000 0.00 0.00 34.72 3.24
4703 7151 8.012957 TCTCATAAATCTAAGGGTTGAGACTC 57.987 38.462 0.00 0.00 34.72 3.36
4704 7152 7.619698 TCTCATAAATCTAAGGGTTGAGACTCA 59.380 37.037 0.00 0.00 34.72 3.41
4705 7153 8.146053 TCATAAATCTAAGGGTTGAGACTCAA 57.854 34.615 13.99 13.99 33.32 3.02
4706 7154 8.602424 TCATAAATCTAAGGGTTGAGACTCAAA 58.398 33.333 19.32 2.78 38.22 2.69
4707 7155 8.887717 CATAAATCTAAGGGTTGAGACTCAAAG 58.112 37.037 19.32 12.59 38.22 2.77
4708 7156 4.891992 TCTAAGGGTTGAGACTCAAAGG 57.108 45.455 19.32 6.70 38.22 3.11
4709 7157 4.489737 TCTAAGGGTTGAGACTCAAAGGA 58.510 43.478 19.32 8.64 38.22 3.36
4710 7158 5.094387 TCTAAGGGTTGAGACTCAAAGGAT 58.906 41.667 19.32 9.24 38.22 3.24
4711 7159 3.990959 AGGGTTGAGACTCAAAGGATC 57.009 47.619 19.32 6.82 38.22 3.36
4712 7160 2.573915 AGGGTTGAGACTCAAAGGATCC 59.426 50.000 19.32 14.91 38.22 3.36
4713 7161 2.622436 GGTTGAGACTCAAAGGATCCG 58.378 52.381 19.32 0.00 38.22 4.18
4714 7162 2.003301 GTTGAGACTCAAAGGATCCGC 58.997 52.381 19.32 1.21 38.22 5.54
4715 7163 1.266178 TGAGACTCAAAGGATCCGCA 58.734 50.000 5.98 0.00 0.00 5.69
4716 7164 1.205655 TGAGACTCAAAGGATCCGCAG 59.794 52.381 5.98 3.51 0.00 5.18
4717 7165 1.205893 GAGACTCAAAGGATCCGCAGT 59.794 52.381 5.98 6.86 0.00 4.40
4718 7166 2.427453 GAGACTCAAAGGATCCGCAGTA 59.573 50.000 5.98 0.00 0.00 2.74
4719 7167 2.832129 AGACTCAAAGGATCCGCAGTAA 59.168 45.455 5.98 0.00 0.00 2.24
4720 7168 3.260884 AGACTCAAAGGATCCGCAGTAAA 59.739 43.478 5.98 0.00 0.00 2.01
4721 7169 3.335579 ACTCAAAGGATCCGCAGTAAAC 58.664 45.455 5.98 0.00 0.00 2.01
4722 7170 3.244422 ACTCAAAGGATCCGCAGTAAACA 60.244 43.478 5.98 0.00 0.00 2.83
4723 7171 3.334691 TCAAAGGATCCGCAGTAAACAG 58.665 45.455 5.98 0.00 0.00 3.16
4724 7172 3.074412 CAAAGGATCCGCAGTAAACAGT 58.926 45.455 5.98 0.00 0.00 3.55
4725 7173 4.020928 TCAAAGGATCCGCAGTAAACAGTA 60.021 41.667 5.98 0.00 0.00 2.74
4726 7174 3.802948 AGGATCCGCAGTAAACAGTAG 57.197 47.619 5.98 0.00 0.00 2.57
4727 7175 2.159085 AGGATCCGCAGTAAACAGTAGC 60.159 50.000 5.98 0.00 0.00 3.58
4728 7176 2.202566 GATCCGCAGTAAACAGTAGCC 58.797 52.381 0.00 0.00 0.00 3.93
4729 7177 0.248289 TCCGCAGTAAACAGTAGCCC 59.752 55.000 0.00 0.00 0.00 5.19
4730 7178 1.082117 CCGCAGTAAACAGTAGCCCG 61.082 60.000 0.00 0.00 0.00 6.13
4731 7179 1.693083 CGCAGTAAACAGTAGCCCGC 61.693 60.000 0.00 0.00 0.00 6.13
4732 7180 0.672401 GCAGTAAACAGTAGCCCGCA 60.672 55.000 0.00 0.00 0.00 5.69
4733 7181 1.803334 CAGTAAACAGTAGCCCGCAA 58.197 50.000 0.00 0.00 0.00 4.85
4734 7182 1.463444 CAGTAAACAGTAGCCCGCAAC 59.537 52.381 0.00 0.00 0.00 4.17
4735 7183 1.346722 AGTAAACAGTAGCCCGCAACT 59.653 47.619 0.00 0.00 0.00 3.16
4736 7184 1.463444 GTAAACAGTAGCCCGCAACTG 59.537 52.381 1.10 1.10 46.84 3.16
4737 7185 1.515521 AAACAGTAGCCCGCAACTGC 61.516 55.000 2.52 0.00 45.65 4.40
4738 7186 2.358615 CAGTAGCCCGCAACTGCA 60.359 61.111 2.12 0.00 42.21 4.41
4739 7187 1.746615 CAGTAGCCCGCAACTGCAT 60.747 57.895 2.12 0.00 42.21 3.96
4740 7188 1.450312 AGTAGCCCGCAACTGCATC 60.450 57.895 2.12 0.00 42.21 3.91
4741 7189 2.124736 TAGCCCGCAACTGCATCC 60.125 61.111 2.12 0.00 42.21 3.51
4745 7193 4.170062 CCGCAACTGCATCCGCTG 62.170 66.667 2.12 0.00 42.21 5.18
4746 7194 4.170062 CGCAACTGCATCCGCTGG 62.170 66.667 2.12 0.00 41.13 4.85
4747 7195 3.058160 GCAACTGCATCCGCTGGT 61.058 61.111 0.00 0.00 41.13 4.00
4748 7196 2.629656 GCAACTGCATCCGCTGGTT 61.630 57.895 0.00 0.00 41.13 3.67
4749 7197 1.959085 CAACTGCATCCGCTGGTTT 59.041 52.632 0.00 0.00 41.13 3.27
4750 7198 0.109597 CAACTGCATCCGCTGGTTTC 60.110 55.000 0.00 0.00 41.13 2.78
4751 7199 0.250901 AACTGCATCCGCTGGTTTCT 60.251 50.000 0.00 0.00 41.13 2.52
4752 7200 0.957395 ACTGCATCCGCTGGTTTCTG 60.957 55.000 0.00 0.00 41.13 3.02
4753 7201 1.651240 CTGCATCCGCTGGTTTCTGG 61.651 60.000 0.00 0.00 39.64 3.86
4754 7202 1.377202 GCATCCGCTGGTTTCTGGA 60.377 57.895 0.00 0.00 34.30 3.86
4755 7203 0.960364 GCATCCGCTGGTTTCTGGAA 60.960 55.000 0.00 0.00 33.48 3.53
4756 7204 0.804989 CATCCGCTGGTTTCTGGAAC 59.195 55.000 0.00 0.00 37.53 3.62
4757 7205 0.400213 ATCCGCTGGTTTCTGGAACA 59.600 50.000 0.54 0.00 40.13 3.18
4758 7206 0.181587 TCCGCTGGTTTCTGGAACAA 59.818 50.000 0.54 0.00 40.13 2.83
4759 7207 1.202879 TCCGCTGGTTTCTGGAACAAT 60.203 47.619 0.54 0.00 40.13 2.71
4760 7208 1.200020 CCGCTGGTTTCTGGAACAATC 59.800 52.381 0.54 0.00 40.13 2.67
4761 7209 1.135972 CGCTGGTTTCTGGAACAATCG 60.136 52.381 0.54 0.00 40.13 3.34
4762 7210 1.401539 GCTGGTTTCTGGAACAATCGC 60.402 52.381 0.54 0.00 40.13 4.58
4763 7211 0.871722 TGGTTTCTGGAACAATCGCG 59.128 50.000 0.00 0.00 40.13 5.87
4764 7212 0.872388 GGTTTCTGGAACAATCGCGT 59.128 50.000 5.77 0.00 40.13 6.01
4765 7213 1.136057 GGTTTCTGGAACAATCGCGTC 60.136 52.381 5.77 0.00 40.13 5.19
4766 7214 1.529438 GTTTCTGGAACAATCGCGTCA 59.471 47.619 5.77 0.00 38.70 4.35
4767 7215 1.144969 TTCTGGAACAATCGCGTCAC 58.855 50.000 5.77 0.00 38.70 3.67
4768 7216 0.032815 TCTGGAACAATCGCGTCACA 59.967 50.000 5.77 0.00 38.70 3.58
4769 7217 0.163788 CTGGAACAATCGCGTCACAC 59.836 55.000 5.77 0.00 38.70 3.82
4770 7218 1.225376 TGGAACAATCGCGTCACACC 61.225 55.000 5.77 5.07 31.92 4.16
4771 7219 0.949105 GGAACAATCGCGTCACACCT 60.949 55.000 5.77 0.00 0.00 4.00
4772 7220 0.438830 GAACAATCGCGTCACACCTC 59.561 55.000 5.77 0.00 0.00 3.85
4773 7221 0.949105 AACAATCGCGTCACACCTCC 60.949 55.000 5.77 0.00 0.00 4.30
4774 7222 1.079819 CAATCGCGTCACACCTCCT 60.080 57.895 5.77 0.00 0.00 3.69
4775 7223 1.078759 CAATCGCGTCACACCTCCTC 61.079 60.000 5.77 0.00 0.00 3.71
4776 7224 1.251527 AATCGCGTCACACCTCCTCT 61.252 55.000 5.77 0.00 0.00 3.69
4777 7225 0.393944 ATCGCGTCACACCTCCTCTA 60.394 55.000 5.77 0.00 0.00 2.43
4778 7226 0.393944 TCGCGTCACACCTCCTCTAT 60.394 55.000 5.77 0.00 0.00 1.98
4779 7227 0.456221 CGCGTCACACCTCCTCTATT 59.544 55.000 0.00 0.00 0.00 1.73
4780 7228 1.534175 CGCGTCACACCTCCTCTATTC 60.534 57.143 0.00 0.00 0.00 1.75
4781 7229 1.751924 GCGTCACACCTCCTCTATTCT 59.248 52.381 0.00 0.00 0.00 2.40
4782 7230 2.166664 GCGTCACACCTCCTCTATTCTT 59.833 50.000 0.00 0.00 0.00 2.52
4783 7231 3.775202 CGTCACACCTCCTCTATTCTTG 58.225 50.000 0.00 0.00 0.00 3.02
4784 7232 3.526534 GTCACACCTCCTCTATTCTTGC 58.473 50.000 0.00 0.00 0.00 4.01
4785 7233 2.501723 TCACACCTCCTCTATTCTTGCC 59.498 50.000 0.00 0.00 0.00 4.52
4786 7234 2.237143 CACACCTCCTCTATTCTTGCCA 59.763 50.000 0.00 0.00 0.00 4.92
4787 7235 3.118112 CACACCTCCTCTATTCTTGCCAT 60.118 47.826 0.00 0.00 0.00 4.40
4788 7236 3.118112 ACACCTCCTCTATTCTTGCCATG 60.118 47.826 0.00 0.00 0.00 3.66
4789 7237 3.118112 CACCTCCTCTATTCTTGCCATGT 60.118 47.826 0.00 0.00 0.00 3.21
4790 7238 3.525199 ACCTCCTCTATTCTTGCCATGTT 59.475 43.478 0.00 0.00 0.00 2.71
4791 7239 3.881688 CCTCCTCTATTCTTGCCATGTTG 59.118 47.826 0.00 0.00 0.00 3.33
4792 7240 3.282021 TCCTCTATTCTTGCCATGTTGC 58.718 45.455 0.00 0.00 0.00 4.17
4793 7241 3.018856 CCTCTATTCTTGCCATGTTGCA 58.981 45.455 0.00 0.00 40.07 4.08
4794 7242 3.635373 CCTCTATTCTTGCCATGTTGCAT 59.365 43.478 0.00 0.00 41.70 3.96
4795 7243 4.499188 CCTCTATTCTTGCCATGTTGCATG 60.499 45.833 0.00 2.38 41.70 4.06
4796 7244 4.018490 TCTATTCTTGCCATGTTGCATGT 58.982 39.130 8.11 0.00 41.70 3.21
4797 7245 2.442212 TTCTTGCCATGTTGCATGTG 57.558 45.000 8.11 2.00 41.70 3.21
4798 7246 0.038067 TCTTGCCATGTTGCATGTGC 60.038 50.000 8.11 10.55 41.70 4.57
4799 7247 1.004799 TTGCCATGTTGCATGTGCC 60.005 52.632 14.91 3.79 41.70 5.01
4800 7248 1.755393 TTGCCATGTTGCATGTGCCA 61.755 50.000 14.91 0.00 41.70 4.92
4801 7249 1.219664 GCCATGTTGCATGTGCCAT 59.780 52.632 2.07 0.00 41.18 4.40
4802 7250 0.391927 GCCATGTTGCATGTGCCATT 60.392 50.000 2.07 0.00 41.18 3.16
4803 7251 1.364721 CCATGTTGCATGTGCCATTG 58.635 50.000 2.07 0.00 41.18 2.82
4804 7252 0.724549 CATGTTGCATGTGCCATTGC 59.275 50.000 2.07 0.00 41.18 3.56
4805 7253 0.321996 ATGTTGCATGTGCCATTGCA 59.678 45.000 2.07 1.62 46.51 4.08
4829 7277 1.163554 GCAAAGAGCCAAGACAGAGG 58.836 55.000 0.00 0.00 37.23 3.69
4836 7284 3.830679 CCAAGACAGAGGCTGAGAC 57.169 57.895 0.00 0.00 35.18 3.36
4837 7285 0.972134 CCAAGACAGAGGCTGAGACA 59.028 55.000 0.00 0.00 35.18 3.41
4838 7286 1.345741 CCAAGACAGAGGCTGAGACAA 59.654 52.381 0.00 0.00 35.18 3.18
4839 7287 2.612471 CCAAGACAGAGGCTGAGACAAG 60.612 54.545 0.00 0.00 35.18 3.16
4840 7288 2.008242 AGACAGAGGCTGAGACAAGT 57.992 50.000 0.00 0.00 35.18 3.16
4841 7289 1.617850 AGACAGAGGCTGAGACAAGTG 59.382 52.381 0.00 0.00 35.18 3.16
4842 7290 1.615883 GACAGAGGCTGAGACAAGTGA 59.384 52.381 0.00 0.00 35.18 3.41
4843 7291 2.036475 GACAGAGGCTGAGACAAGTGAA 59.964 50.000 0.00 0.00 35.18 3.18
4844 7292 2.224161 ACAGAGGCTGAGACAAGTGAAC 60.224 50.000 0.00 0.00 35.18 3.18
4845 7293 1.000283 AGAGGCTGAGACAAGTGAACG 60.000 52.381 0.00 0.00 0.00 3.95
4846 7294 0.753262 AGGCTGAGACAAGTGAACGT 59.247 50.000 0.00 0.00 0.00 3.99
4847 7295 1.139058 AGGCTGAGACAAGTGAACGTT 59.861 47.619 0.00 0.00 0.00 3.99
4848 7296 1.940613 GGCTGAGACAAGTGAACGTTT 59.059 47.619 0.46 0.00 0.00 3.60
4849 7297 2.354821 GGCTGAGACAAGTGAACGTTTT 59.645 45.455 0.46 0.00 0.00 2.43
4850 7298 3.181500 GGCTGAGACAAGTGAACGTTTTT 60.181 43.478 0.46 0.00 0.00 1.94
4851 7299 4.034742 GGCTGAGACAAGTGAACGTTTTTA 59.965 41.667 0.46 0.00 0.00 1.52
4852 7300 5.448089 GGCTGAGACAAGTGAACGTTTTTAA 60.448 40.000 0.46 0.00 0.00 1.52
4853 7301 5.451342 GCTGAGACAAGTGAACGTTTTTAAC 59.549 40.000 0.46 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.452145 GAAAGTCGTTGGCAAGGGCA 61.452 55.000 24.33 2.38 43.71 5.36
1 2 1.285950 GAAAGTCGTTGGCAAGGGC 59.714 57.895 16.15 16.15 40.13 5.19
2 3 0.882927 TCGAAAGTCGTTGGCAAGGG 60.883 55.000 18.76 6.01 41.35 3.95
3 4 0.234884 GTCGAAAGTCGTTGGCAAGG 59.765 55.000 13.49 13.49 41.35 3.61
5 6 0.934496 CAGTCGAAAGTCGTTGGCAA 59.066 50.000 0.00 0.00 41.35 4.52
6 7 0.179094 ACAGTCGAAAGTCGTTGGCA 60.179 50.000 0.00 0.00 41.35 4.92
7 8 0.935196 AACAGTCGAAAGTCGTTGGC 59.065 50.000 0.00 0.00 41.35 4.52
8 9 2.605818 TCAAACAGTCGAAAGTCGTTGG 59.394 45.455 0.00 0.00 41.35 3.77
9 10 3.306166 ACTCAAACAGTCGAAAGTCGTTG 59.694 43.478 0.00 1.29 41.35 4.10
10 11 3.518590 ACTCAAACAGTCGAAAGTCGTT 58.481 40.909 0.00 0.00 41.35 3.85
11 12 3.160777 ACTCAAACAGTCGAAAGTCGT 57.839 42.857 0.00 0.00 41.35 4.34
12 13 3.306166 ACAACTCAAACAGTCGAAAGTCG 59.694 43.478 0.00 0.00 42.10 4.18
13 14 4.578601 CACAACTCAAACAGTCGAAAGTC 58.421 43.478 0.00 0.00 32.30 3.01
14 15 3.181510 GCACAACTCAAACAGTCGAAAGT 60.182 43.478 0.00 0.00 32.30 2.66
15 16 3.354397 GCACAACTCAAACAGTCGAAAG 58.646 45.455 0.00 0.00 32.30 2.62
16 17 2.222931 CGCACAACTCAAACAGTCGAAA 60.223 45.455 0.00 0.00 32.30 3.46
17 18 1.326245 CGCACAACTCAAACAGTCGAA 59.674 47.619 0.00 0.00 32.30 3.71
18 19 0.927537 CGCACAACTCAAACAGTCGA 59.072 50.000 0.00 0.00 32.30 4.20
19 20 0.042188 CCGCACAACTCAAACAGTCG 60.042 55.000 0.00 0.00 32.30 4.18
20 21 1.014352 ACCGCACAACTCAAACAGTC 58.986 50.000 0.00 0.00 32.30 3.51
21 22 2.210116 CTACCGCACAACTCAAACAGT 58.790 47.619 0.00 0.00 36.64 3.55
22 23 2.210116 ACTACCGCACAACTCAAACAG 58.790 47.619 0.00 0.00 0.00 3.16
23 24 2.319136 ACTACCGCACAACTCAAACA 57.681 45.000 0.00 0.00 0.00 2.83
24 25 2.610374 TGAACTACCGCACAACTCAAAC 59.390 45.455 0.00 0.00 0.00 2.93
25 26 2.907634 TGAACTACCGCACAACTCAAA 58.092 42.857 0.00 0.00 0.00 2.69
26 27 2.605837 TGAACTACCGCACAACTCAA 57.394 45.000 0.00 0.00 0.00 3.02
27 28 2.224185 ACATGAACTACCGCACAACTCA 60.224 45.455 0.00 0.00 0.00 3.41
28 29 2.413837 ACATGAACTACCGCACAACTC 58.586 47.619 0.00 0.00 0.00 3.01
29 30 2.543777 ACATGAACTACCGCACAACT 57.456 45.000 0.00 0.00 0.00 3.16
30 31 2.546368 TGAACATGAACTACCGCACAAC 59.454 45.455 0.00 0.00 0.00 3.32
31 32 2.546368 GTGAACATGAACTACCGCACAA 59.454 45.455 0.00 0.00 0.00 3.33
32 33 2.139917 GTGAACATGAACTACCGCACA 58.860 47.619 0.00 0.00 0.00 4.57
33 34 2.139917 TGTGAACATGAACTACCGCAC 58.860 47.619 0.00 0.00 0.00 5.34
34 35 2.535012 TGTGAACATGAACTACCGCA 57.465 45.000 0.00 0.00 0.00 5.69
35 36 2.412847 GCTTGTGAACATGAACTACCGC 60.413 50.000 0.00 0.00 0.00 5.68
36 37 2.805671 TGCTTGTGAACATGAACTACCG 59.194 45.455 0.00 0.00 0.00 4.02
37 38 4.379813 CCATGCTTGTGAACATGAACTACC 60.380 45.833 0.00 0.00 45.23 3.18
38 39 4.726416 CCATGCTTGTGAACATGAACTAC 58.274 43.478 0.00 0.00 45.23 2.73
39 40 3.191162 GCCATGCTTGTGAACATGAACTA 59.809 43.478 0.00 0.00 45.23 2.24
40 41 2.029649 GCCATGCTTGTGAACATGAACT 60.030 45.455 0.00 0.00 45.23 3.01
41 42 2.029649 AGCCATGCTTGTGAACATGAAC 60.030 45.455 0.00 0.00 45.23 3.18
42 43 2.241160 AGCCATGCTTGTGAACATGAA 58.759 42.857 0.00 0.00 45.23 2.57
43 44 1.913778 AGCCATGCTTGTGAACATGA 58.086 45.000 0.00 0.00 45.23 3.07
54 55 2.528564 ACATGTAACCAAAGCCATGCT 58.471 42.857 0.00 0.00 42.56 3.79
55 56 3.317603 AACATGTAACCAAAGCCATGC 57.682 42.857 0.00 0.00 38.56 4.06
56 57 5.895636 TCTAACATGTAACCAAAGCCATG 57.104 39.130 0.00 0.00 40.34 3.66
57 58 5.951747 ACATCTAACATGTAACCAAAGCCAT 59.048 36.000 0.00 0.00 0.00 4.40
58 59 5.321102 ACATCTAACATGTAACCAAAGCCA 58.679 37.500 0.00 0.00 0.00 4.75
59 60 5.163652 GGACATCTAACATGTAACCAAAGCC 60.164 44.000 0.00 0.00 31.52 4.35
60 61 5.414454 TGGACATCTAACATGTAACCAAAGC 59.586 40.000 0.00 0.00 31.52 3.51
61 62 7.336679 TGATGGACATCTAACATGTAACCAAAG 59.663 37.037 12.97 0.00 38.60 2.77
62 63 7.171653 TGATGGACATCTAACATGTAACCAAA 58.828 34.615 12.97 0.00 38.60 3.28
63 64 6.716284 TGATGGACATCTAACATGTAACCAA 58.284 36.000 12.97 0.00 38.60 3.67
64 65 6.306643 TGATGGACATCTAACATGTAACCA 57.693 37.500 12.97 2.14 38.60 3.67
65 66 6.260936 CCTTGATGGACATCTAACATGTAACC 59.739 42.308 12.97 0.00 38.60 2.85
66 67 7.047891 TCCTTGATGGACATCTAACATGTAAC 58.952 38.462 12.97 0.00 40.56 2.50
67 68 7.194112 TCCTTGATGGACATCTAACATGTAA 57.806 36.000 12.97 0.00 40.56 2.41
68 69 6.806668 TCCTTGATGGACATCTAACATGTA 57.193 37.500 12.97 0.00 40.56 2.29
69 70 5.698741 TCCTTGATGGACATCTAACATGT 57.301 39.130 12.97 0.00 40.56 3.21
81 82 1.825090 GTGCACATGTCCTTGATGGA 58.175 50.000 13.17 0.00 43.86 3.41
82 83 0.448990 CGTGCACATGTCCTTGATGG 59.551 55.000 18.64 0.00 37.10 3.51
83 84 0.448990 CCGTGCACATGTCCTTGATG 59.551 55.000 18.64 0.00 0.00 3.07
84 85 1.308069 GCCGTGCACATGTCCTTGAT 61.308 55.000 18.64 0.00 0.00 2.57
85 86 1.965930 GCCGTGCACATGTCCTTGA 60.966 57.895 18.64 0.00 0.00 3.02
86 87 2.562912 GCCGTGCACATGTCCTTG 59.437 61.111 18.64 0.00 0.00 3.61
87 88 2.672996 GGCCGTGCACATGTCCTT 60.673 61.111 18.64 0.00 0.00 3.36
91 92 4.947147 AACCGGCCGTGCACATGT 62.947 61.111 26.12 10.02 0.00 3.21
92 93 4.403137 CAACCGGCCGTGCACATG 62.403 66.667 26.12 9.27 0.00 3.21
93 94 4.947147 ACAACCGGCCGTGCACAT 62.947 61.111 26.12 0.63 0.00 3.21
102 103 2.510064 TATGTCCGTCCACAACCGGC 62.510 60.000 0.00 0.00 43.87 6.13
103 104 0.738412 GTATGTCCGTCCACAACCGG 60.738 60.000 0.00 0.00 45.55 5.28
104 105 0.038067 TGTATGTCCGTCCACAACCG 60.038 55.000 0.00 0.00 0.00 4.44
105 106 2.006888 CATGTATGTCCGTCCACAACC 58.993 52.381 0.00 0.00 0.00 3.77
106 107 2.695359 ACATGTATGTCCGTCCACAAC 58.305 47.619 0.00 0.00 35.87 3.32
117 118 9.955102 ATTGATGCTATTATCTGACATGTATGT 57.045 29.630 0.00 0.00 45.16 2.29
121 122 9.346005 TGAAATTGATGCTATTATCTGACATGT 57.654 29.630 0.00 0.00 0.00 3.21
135 136 9.813446 GGAAGATAAGAAATTGAAATTGATGCT 57.187 29.630 0.00 0.00 0.00 3.79
136 137 9.813446 AGGAAGATAAGAAATTGAAATTGATGC 57.187 29.630 0.00 0.00 0.00 3.91
161 162 8.391106 GGTGCACACAACTAGATAGATAAAAAG 58.609 37.037 20.43 0.00 0.00 2.27
164 165 7.182817 AGGTGCACACAACTAGATAGATAAA 57.817 36.000 20.43 0.00 43.97 1.40
171 172 6.003950 ACATTTTAGGTGCACACAACTAGAT 58.996 36.000 20.43 6.17 46.60 1.98
173 174 5.470098 AGACATTTTAGGTGCACACAACTAG 59.530 40.000 20.43 5.83 46.60 2.57
177 178 5.590663 TGTAAGACATTTTAGGTGCACACAA 59.409 36.000 20.43 8.76 0.00 3.33
220 223 6.475207 CGTAGGTGAGCATGTGTAATTTTAC 58.525 40.000 0.00 0.00 0.00 2.01
231 234 1.860950 GTATGTGCGTAGGTGAGCATG 59.139 52.381 0.00 0.00 45.69 4.06
244 247 3.438297 AGGTACGATGAGTGTATGTGC 57.562 47.619 0.00 0.00 0.00 4.57
260 264 4.470602 TCTCGGAGATGCTCATAAAGGTA 58.529 43.478 2.97 0.00 33.89 3.08
265 269 5.186198 TCGATATCTCGGAGATGCTCATAA 58.814 41.667 26.72 8.55 45.10 1.90
278 282 1.442857 GTGCCGGCTCGATATCTCG 60.443 63.158 29.70 0.00 46.41 4.04
283 287 0.529773 GATGTTGTGCCGGCTCGATA 60.530 55.000 29.70 22.31 0.00 2.92
313 317 2.874086 CAAGGCGCATATGATGACTTCA 59.126 45.455 10.83 0.00 39.12 3.02
335 339 3.525059 GAGACGCTCTCATCGACTG 57.475 57.895 9.30 0.00 42.90 3.51
404 408 2.246719 AGACTTGACACTTGTGCTCC 57.753 50.000 0.10 0.00 0.00 4.70
427 432 2.983192 TCCACCATGGTTCAAGTCCTAA 59.017 45.455 16.84 0.00 39.03 2.69
461 466 6.065374 TGGCTCAGATGGTTACTTGTTTTTA 58.935 36.000 0.00 0.00 0.00 1.52
470 475 2.480416 CGAGTCTGGCTCAGATGGTTAC 60.480 54.545 10.25 0.00 42.73 2.50
474 479 1.326213 ACCGAGTCTGGCTCAGATGG 61.326 60.000 10.25 4.81 42.73 3.51
486 491 1.429463 AGACATTTGCGAACCGAGTC 58.571 50.000 0.00 0.00 0.00 3.36
491 496 3.764885 ATGCTAAGACATTTGCGAACC 57.235 42.857 0.00 0.00 39.63 3.62
495 500 4.229096 ACAACAATGCTAAGACATTTGCG 58.771 39.130 0.00 0.00 39.63 4.85
513 518 0.666374 ACCACGCCTAGCAAAACAAC 59.334 50.000 0.00 0.00 0.00 3.32
527 532 1.882682 AAACGACGCGATCAACCACG 61.883 55.000 15.93 7.56 0.00 4.94
567 572 1.939934 TGCACGGACAGAAAGACAAAG 59.060 47.619 0.00 0.00 0.00 2.77
577 582 2.151202 ACATTTTAGGTGCACGGACAG 58.849 47.619 11.45 0.00 0.00 3.51
580 585 3.632604 TCAAAACATTTTAGGTGCACGGA 59.367 39.130 11.45 0.00 0.00 4.69
598 605 9.979578 ACAATGCAATGTTAAGATTTAGTCAAA 57.020 25.926 0.28 0.00 0.00 2.69
652 659 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
653 660 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
656 663 6.699063 CGTTAAACGTCTTACATTATGGGAC 58.301 40.000 0.00 1.75 36.74 4.46
657 664 6.890663 CGTTAAACGTCTTACATTATGGGA 57.109 37.500 0.00 0.00 36.74 4.37
680 687 8.556213 ACTCTCTCCGTCTCATAATATAAGAC 57.444 38.462 0.00 0.00 36.82 3.01
691 698 9.575868 AGATTAAATAATACTCTCTCCGTCTCA 57.424 33.333 0.00 0.00 0.00 3.27
824 832 8.442605 AAAATCACAAAATGAACCGTATTACG 57.557 30.769 9.26 9.26 41.93 3.18
960 981 2.104859 CGGTGAGACGGTCGAGCTA 61.105 63.158 13.48 0.00 0.00 3.32
968 989 3.450115 GAGGGGACGGTGAGACGG 61.450 72.222 0.00 0.00 38.39 4.79
973 994 2.284405 GGAAGGAGGGGACGGTGA 60.284 66.667 0.00 0.00 0.00 4.02
1109 1130 1.980232 TGGCGCCTTCTCGGTAAGA 60.980 57.895 29.70 0.00 34.25 2.10
1188 1209 4.771356 TTCTTCGGGCGCGACGAG 62.771 66.667 26.59 20.78 41.81 4.18
1189 1210 4.771356 CTTCTTCGGGCGCGACGA 62.771 66.667 26.59 25.74 38.78 4.20
1262 1289 3.394836 GAACGGGGCTGGAGAGCT 61.395 66.667 0.00 0.00 45.44 4.09
1430 1457 6.010850 AGATATCAGAAATACAGGTAGCGGA 58.989 40.000 5.32 0.00 0.00 5.54
1433 1460 7.757624 GCAGTAGATATCAGAAATACAGGTAGC 59.242 40.741 5.32 0.00 0.00 3.58
1435 1462 7.950684 AGGCAGTAGATATCAGAAATACAGGTA 59.049 37.037 5.32 0.00 0.00 3.08
1436 1463 6.784969 AGGCAGTAGATATCAGAAATACAGGT 59.215 38.462 5.32 0.00 0.00 4.00
1441 1468 6.695429 CAGCAGGCAGTAGATATCAGAAATA 58.305 40.000 5.32 0.00 0.00 1.40
1460 1493 0.029834 GAACAAGTGGTGTGCAGCAG 59.970 55.000 0.00 0.00 40.60 4.24
1474 1507 4.058124 CTCTCTGAAACACCATCGAACAA 58.942 43.478 0.00 0.00 0.00 2.83
1486 1519 2.675348 CCTCGCCATTTCTCTCTGAAAC 59.325 50.000 0.00 0.00 46.08 2.78
1514 1547 5.608437 AGACATCACCCCAGATATAACACAT 59.392 40.000 0.00 0.00 0.00 3.21
1516 1549 5.552870 AGACATCACCCCAGATATAACAC 57.447 43.478 0.00 0.00 0.00 3.32
1519 1552 5.221441 CGACAAGACATCACCCCAGATATAA 60.221 44.000 0.00 0.00 0.00 0.98
1520 1553 4.280929 CGACAAGACATCACCCCAGATATA 59.719 45.833 0.00 0.00 0.00 0.86
1521 1554 3.070159 CGACAAGACATCACCCCAGATAT 59.930 47.826 0.00 0.00 0.00 1.63
1523 1556 1.208052 CGACAAGACATCACCCCAGAT 59.792 52.381 0.00 0.00 0.00 2.90
1540 1592 1.094785 CCACACCATTCCAATCCGAC 58.905 55.000 0.00 0.00 0.00 4.79
1546 1598 4.483950 TGAAATAACCCACACCATTCCAA 58.516 39.130 0.00 0.00 0.00 3.53
1578 1630 4.220693 AGCATGCAGGTACACAATTCTA 57.779 40.909 21.98 0.00 0.00 2.10
1699 1980 8.445275 TTGTAATCGCACAATTAATACCTGAT 57.555 30.769 0.00 0.00 33.55 2.90
1712 1993 4.994217 TGTGAGAAGAATTGTAATCGCACA 59.006 37.500 8.96 8.96 45.79 4.57
1713 1994 5.530519 TGTGAGAAGAATTGTAATCGCAC 57.469 39.130 4.78 4.78 41.21 5.34
1714 1995 7.841915 TTATGTGAGAAGAATTGTAATCGCA 57.158 32.000 5.91 5.91 0.00 5.10
1721 2002 8.338259 GCGACAATATTATGTGAGAAGAATTGT 58.662 33.333 0.00 0.00 32.57 2.71
1722 2003 7.528516 CGCGACAATATTATGTGAGAAGAATTG 59.471 37.037 0.00 0.00 32.57 2.32
1723 2004 7.438160 TCGCGACAATATTATGTGAGAAGAATT 59.562 33.333 3.71 0.00 32.57 2.17
1727 2008 6.199154 AGTTCGCGACAATATTATGTGAGAAG 59.801 38.462 9.15 0.00 32.57 2.85
1745 2029 5.083136 AGCATATAATGAACAAGTTCGCG 57.917 39.130 0.00 0.00 42.28 5.87
1770 2054 9.369904 GAAAAGGTATGCACAATCACAAAATAT 57.630 29.630 0.00 0.00 0.00 1.28
1804 2089 5.440610 ACCAGGCAAAAAGGATAGATACAG 58.559 41.667 0.00 0.00 0.00 2.74
1899 2184 9.938280 TCTTAGTAAGCAAGCACTAAAGAAATA 57.062 29.630 4.93 0.00 36.93 1.40
1900 2185 8.848474 TCTTAGTAAGCAAGCACTAAAGAAAT 57.152 30.769 4.93 0.00 36.93 2.17
1947 2232 6.638063 CACTCATTTTATGTGCAATAATCGGG 59.362 38.462 0.00 0.00 0.00 5.14
2022 2307 6.977213 AGGTGCGAATTTACTTGTATTGTTT 58.023 32.000 0.00 0.00 0.00 2.83
2055 2342 8.796475 ACAGCAGTACTCATCACATTTAAAATT 58.204 29.630 0.00 0.00 0.00 1.82
2081 2368 6.179906 AGAAAATCTCAGACAAGGAGTGAA 57.820 37.500 0.00 0.00 34.04 3.18
2114 2401 7.858583 AGAAAAAGAAATTCAAATTCAGCTGC 58.141 30.769 9.47 0.00 0.00 5.25
2120 2407 9.260002 TGCTGGTAGAAAAAGAAATTCAAATTC 57.740 29.630 0.00 0.00 0.00 2.17
2125 2412 6.183360 TGCTTGCTGGTAGAAAAAGAAATTCA 60.183 34.615 0.00 0.00 0.00 2.57
2126 2413 6.215845 TGCTTGCTGGTAGAAAAAGAAATTC 58.784 36.000 0.00 0.00 0.00 2.17
2128 2415 5.789643 TGCTTGCTGGTAGAAAAAGAAAT 57.210 34.783 0.00 0.00 0.00 2.17
2288 2575 0.552615 ACCCAAACCCCCAGCTCTAT 60.553 55.000 0.00 0.00 0.00 1.98
2850 3220 4.873817 TGAGCATGTGAATTCCAAAACAG 58.126 39.130 2.27 0.00 0.00 3.16
2947 3317 6.822667 TGCAAGAGAAGCATTGAGATTTAA 57.177 33.333 0.00 0.00 37.02 1.52
3390 3764 1.031235 CGCCATGAATTACCCATGCA 58.969 50.000 0.00 0.00 39.89 3.96
3398 3772 2.038952 CCCCATCTCTCGCCATGAATTA 59.961 50.000 0.00 0.00 0.00 1.40
3516 3890 7.884816 TGTACTGCAACTAGTCATTAACTTC 57.115 36.000 0.00 0.00 39.55 3.01
3635 4094 7.771183 ACATAACCCTATTGTGCTTTAACATG 58.229 34.615 0.00 0.00 0.00 3.21
3822 4356 8.771521 ACATCAATATCAAGAAATGATCCCAA 57.228 30.769 0.00 0.00 45.91 4.12
4065 4658 3.798337 CACCACAGTTTGTTTTCATCAGC 59.202 43.478 0.00 0.00 0.00 4.26
4100 4693 6.998074 TCACCATTTTCTGTAGATGTGTTCTT 59.002 34.615 0.00 0.00 35.79 2.52
4379 5097 6.768861 AGATATATATCTACTCCCGTGAGCAC 59.231 42.308 21.40 0.00 41.05 4.40
4406 6830 4.022849 GCAATGGTACTTCTGCTCTGTTTT 60.023 41.667 0.00 0.00 0.00 2.43
4460 6884 7.106439 TCCACTTGTTCATGAAAGCTAAAAA 57.894 32.000 10.35 0.00 0.00 1.94
4487 6914 5.413833 CACAGATGTACCTCTGAGCAATTTT 59.586 40.000 28.31 6.51 44.48 1.82
4629 7077 8.995220 TGCTTTAATTCAAAACTCGTACACTAT 58.005 29.630 0.00 0.00 0.00 2.12
4630 7078 8.367943 TGCTTTAATTCAAAACTCGTACACTA 57.632 30.769 0.00 0.00 0.00 2.74
4631 7079 7.254227 TGCTTTAATTCAAAACTCGTACACT 57.746 32.000 0.00 0.00 0.00 3.55
4632 7080 7.429920 TGTTGCTTTAATTCAAAACTCGTACAC 59.570 33.333 0.00 0.00 0.00 2.90
4633 7081 7.473366 TGTTGCTTTAATTCAAAACTCGTACA 58.527 30.769 0.00 0.00 0.00 2.90
4634 7082 7.357287 GCTGTTGCTTTAATTCAAAACTCGTAC 60.357 37.037 0.00 0.00 36.03 3.67
4635 7083 6.635239 GCTGTTGCTTTAATTCAAAACTCGTA 59.365 34.615 0.00 0.00 36.03 3.43
4636 7084 5.458779 GCTGTTGCTTTAATTCAAAACTCGT 59.541 36.000 0.00 0.00 36.03 4.18
4637 7085 5.458452 TGCTGTTGCTTTAATTCAAAACTCG 59.542 36.000 0.00 0.00 40.48 4.18
4638 7086 6.560251 CGTGCTGTTGCTTTAATTCAAAACTC 60.560 38.462 0.00 0.00 40.48 3.01
4639 7087 5.231991 CGTGCTGTTGCTTTAATTCAAAACT 59.768 36.000 0.00 0.00 40.48 2.66
4640 7088 5.231147 TCGTGCTGTTGCTTTAATTCAAAAC 59.769 36.000 0.00 0.00 40.48 2.43
4641 7089 5.344066 TCGTGCTGTTGCTTTAATTCAAAA 58.656 33.333 0.00 0.00 40.48 2.44
4642 7090 4.926244 TCGTGCTGTTGCTTTAATTCAAA 58.074 34.783 0.00 0.00 40.48 2.69
4643 7091 4.560136 TCGTGCTGTTGCTTTAATTCAA 57.440 36.364 0.00 0.00 40.48 2.69
4644 7092 4.379394 GGATCGTGCTGTTGCTTTAATTCA 60.379 41.667 0.00 0.00 40.48 2.57
4645 7093 4.098416 GGATCGTGCTGTTGCTTTAATTC 58.902 43.478 0.00 0.00 40.48 2.17
4646 7094 3.758554 AGGATCGTGCTGTTGCTTTAATT 59.241 39.130 0.00 0.00 40.48 1.40
4647 7095 3.347216 AGGATCGTGCTGTTGCTTTAAT 58.653 40.909 0.00 0.00 40.48 1.40
4648 7096 2.778299 AGGATCGTGCTGTTGCTTTAA 58.222 42.857 0.00 0.00 40.48 1.52
4649 7097 2.472695 AGGATCGTGCTGTTGCTTTA 57.527 45.000 0.00 0.00 40.48 1.85
4650 7098 2.472695 TAGGATCGTGCTGTTGCTTT 57.527 45.000 0.00 0.00 40.48 3.51
4651 7099 2.555199 GATAGGATCGTGCTGTTGCTT 58.445 47.619 0.00 0.00 40.48 3.91
4652 7100 1.202580 GGATAGGATCGTGCTGTTGCT 60.203 52.381 0.00 0.00 40.48 3.91
4653 7101 1.221414 GGATAGGATCGTGCTGTTGC 58.779 55.000 0.00 0.00 40.20 4.17
4654 7102 1.202417 ACGGATAGGATCGTGCTGTTG 60.202 52.381 0.00 0.00 38.25 3.33
4655 7103 1.112113 ACGGATAGGATCGTGCTGTT 58.888 50.000 0.00 0.00 38.25 3.16
4656 7104 1.112113 AACGGATAGGATCGTGCTGT 58.888 50.000 0.00 0.00 39.70 4.40
4657 7105 1.491670 CAACGGATAGGATCGTGCTG 58.508 55.000 0.00 0.00 39.70 4.41
4658 7106 0.389391 CCAACGGATAGGATCGTGCT 59.611 55.000 0.00 0.00 39.70 4.40
4659 7107 0.104304 ACCAACGGATAGGATCGTGC 59.896 55.000 0.00 0.00 39.70 5.34
4660 7108 1.681793 AGACCAACGGATAGGATCGTG 59.318 52.381 0.00 0.00 39.70 4.35
4661 7109 1.955080 GAGACCAACGGATAGGATCGT 59.045 52.381 0.00 0.00 41.71 3.73
4662 7110 1.954382 TGAGACCAACGGATAGGATCG 59.046 52.381 0.00 0.00 0.00 3.69
4663 7111 5.723672 TTATGAGACCAACGGATAGGATC 57.276 43.478 0.00 0.00 0.00 3.36
4664 7112 6.498651 AGATTTATGAGACCAACGGATAGGAT 59.501 38.462 0.00 0.00 0.00 3.24
4665 7113 5.839063 AGATTTATGAGACCAACGGATAGGA 59.161 40.000 0.00 0.00 0.00 2.94
4666 7114 6.102897 AGATTTATGAGACCAACGGATAGG 57.897 41.667 0.00 0.00 0.00 2.57
4667 7115 7.815068 CCTTAGATTTATGAGACCAACGGATAG 59.185 40.741 0.00 0.00 0.00 2.08
4668 7116 7.256190 CCCTTAGATTTATGAGACCAACGGATA 60.256 40.741 0.00 0.00 0.00 2.59
4669 7117 6.464465 CCCTTAGATTTATGAGACCAACGGAT 60.464 42.308 0.00 0.00 0.00 4.18
4670 7118 5.163343 CCCTTAGATTTATGAGACCAACGGA 60.163 44.000 0.00 0.00 0.00 4.69
4671 7119 5.057149 CCCTTAGATTTATGAGACCAACGG 58.943 45.833 0.00 0.00 0.00 4.44
4672 7120 5.671493 ACCCTTAGATTTATGAGACCAACG 58.329 41.667 0.00 0.00 0.00 4.10
4673 7121 7.110155 TCAACCCTTAGATTTATGAGACCAAC 58.890 38.462 0.00 0.00 0.00 3.77
4674 7122 7.182026 TCTCAACCCTTAGATTTATGAGACCAA 59.818 37.037 0.00 0.00 37.49 3.67
4675 7123 6.672218 TCTCAACCCTTAGATTTATGAGACCA 59.328 38.462 0.00 0.00 37.49 4.02
4676 7124 7.125792 TCTCAACCCTTAGATTTATGAGACC 57.874 40.000 0.00 0.00 37.49 3.85
4678 7126 7.619698 TGAGTCTCAACCCTTAGATTTATGAGA 59.380 37.037 0.00 0.00 39.42 3.27
4679 7127 7.786030 TGAGTCTCAACCCTTAGATTTATGAG 58.214 38.462 0.00 0.00 35.35 2.90
4680 7128 7.733773 TGAGTCTCAACCCTTAGATTTATGA 57.266 36.000 0.00 0.00 0.00 2.15
4681 7129 8.792830 TTTGAGTCTCAACCCTTAGATTTATG 57.207 34.615 14.98 0.00 35.89 1.90
4682 7130 8.049721 CCTTTGAGTCTCAACCCTTAGATTTAT 58.950 37.037 14.98 0.00 35.89 1.40
4683 7131 7.236847 TCCTTTGAGTCTCAACCCTTAGATTTA 59.763 37.037 14.98 0.00 35.89 1.40
4684 7132 6.044404 TCCTTTGAGTCTCAACCCTTAGATTT 59.956 38.462 14.98 0.00 35.89 2.17
4685 7133 5.548056 TCCTTTGAGTCTCAACCCTTAGATT 59.452 40.000 14.98 0.00 35.89 2.40
4686 7134 5.094387 TCCTTTGAGTCTCAACCCTTAGAT 58.906 41.667 14.98 0.00 35.89 1.98
4687 7135 4.489737 TCCTTTGAGTCTCAACCCTTAGA 58.510 43.478 14.98 3.59 35.89 2.10
4688 7136 4.891992 TCCTTTGAGTCTCAACCCTTAG 57.108 45.455 14.98 9.17 35.89 2.18
4689 7137 4.225267 GGATCCTTTGAGTCTCAACCCTTA 59.775 45.833 14.98 0.00 35.89 2.69
4690 7138 3.009584 GGATCCTTTGAGTCTCAACCCTT 59.990 47.826 14.98 1.30 35.89 3.95
4691 7139 2.573915 GGATCCTTTGAGTCTCAACCCT 59.426 50.000 14.98 0.77 35.89 4.34
4692 7140 2.678190 CGGATCCTTTGAGTCTCAACCC 60.678 54.545 14.98 9.98 35.89 4.11
4693 7141 2.622436 CGGATCCTTTGAGTCTCAACC 58.378 52.381 14.98 11.23 35.89 3.77
4694 7142 2.003301 GCGGATCCTTTGAGTCTCAAC 58.997 52.381 14.98 3.39 35.89 3.18
4695 7143 1.623311 TGCGGATCCTTTGAGTCTCAA 59.377 47.619 11.36 11.36 34.03 3.02
4696 7144 1.205655 CTGCGGATCCTTTGAGTCTCA 59.794 52.381 10.75 0.00 0.00 3.27
4697 7145 1.205893 ACTGCGGATCCTTTGAGTCTC 59.794 52.381 10.75 0.00 0.00 3.36
4698 7146 1.270907 ACTGCGGATCCTTTGAGTCT 58.729 50.000 10.75 0.00 0.00 3.24
4699 7147 2.961526 TACTGCGGATCCTTTGAGTC 57.038 50.000 10.75 0.00 0.00 3.36
4700 7148 3.244422 TGTTTACTGCGGATCCTTTGAGT 60.244 43.478 10.75 8.40 0.00 3.41
4701 7149 3.334691 TGTTTACTGCGGATCCTTTGAG 58.665 45.455 10.75 2.57 0.00 3.02
4702 7150 3.244422 ACTGTTTACTGCGGATCCTTTGA 60.244 43.478 10.75 0.00 0.00 2.69
4703 7151 3.074412 ACTGTTTACTGCGGATCCTTTG 58.926 45.455 10.75 1.69 0.00 2.77
4704 7152 3.418684 ACTGTTTACTGCGGATCCTTT 57.581 42.857 10.75 0.00 0.00 3.11
4705 7153 3.679083 GCTACTGTTTACTGCGGATCCTT 60.679 47.826 10.75 0.00 0.00 3.36
4706 7154 2.159085 GCTACTGTTTACTGCGGATCCT 60.159 50.000 10.75 0.00 0.00 3.24
4707 7155 2.202566 GCTACTGTTTACTGCGGATCC 58.797 52.381 0.00 0.00 0.00 3.36
4708 7156 2.202566 GGCTACTGTTTACTGCGGATC 58.797 52.381 0.00 0.00 0.00 3.36
4709 7157 1.134491 GGGCTACTGTTTACTGCGGAT 60.134 52.381 0.00 0.00 0.00 4.18
4710 7158 0.248289 GGGCTACTGTTTACTGCGGA 59.752 55.000 0.00 0.00 0.00 5.54
4711 7159 1.082117 CGGGCTACTGTTTACTGCGG 61.082 60.000 0.00 0.00 0.00 5.69
4712 7160 1.693083 GCGGGCTACTGTTTACTGCG 61.693 60.000 0.00 0.00 0.00 5.18
4713 7161 0.672401 TGCGGGCTACTGTTTACTGC 60.672 55.000 0.00 0.00 0.00 4.40
4714 7162 1.463444 GTTGCGGGCTACTGTTTACTG 59.537 52.381 0.00 0.00 0.00 2.74
4715 7163 1.346722 AGTTGCGGGCTACTGTTTACT 59.653 47.619 6.95 0.00 31.37 2.24
4716 7164 1.463444 CAGTTGCGGGCTACTGTTTAC 59.537 52.381 21.64 0.00 42.09 2.01
4717 7165 1.803334 CAGTTGCGGGCTACTGTTTA 58.197 50.000 21.64 0.00 42.09 2.01
4718 7166 1.515521 GCAGTTGCGGGCTACTGTTT 61.516 55.000 27.21 0.00 46.27 2.83
4719 7167 1.966451 GCAGTTGCGGGCTACTGTT 60.966 57.895 27.21 0.00 46.27 3.16
4720 7168 2.358737 GCAGTTGCGGGCTACTGT 60.359 61.111 27.21 0.17 46.27 3.55
4721 7169 1.709147 GATGCAGTTGCGGGCTACTG 61.709 60.000 24.33 24.33 46.91 2.74
4722 7170 1.450312 GATGCAGTTGCGGGCTACT 60.450 57.895 1.92 1.92 45.83 2.57
4723 7171 2.472909 GGATGCAGTTGCGGGCTAC 61.473 63.158 0.00 0.00 45.83 3.58
4724 7172 2.124736 GGATGCAGTTGCGGGCTA 60.125 61.111 0.00 0.00 45.83 3.93
4728 7176 4.170062 CAGCGGATGCAGTTGCGG 62.170 66.667 3.38 0.00 46.23 5.69
4729 7177 4.170062 CCAGCGGATGCAGTTGCG 62.170 66.667 0.00 0.00 46.23 4.85
4730 7178 2.146073 AAACCAGCGGATGCAGTTGC 62.146 55.000 0.00 0.00 46.23 4.17
4731 7179 0.109597 GAAACCAGCGGATGCAGTTG 60.110 55.000 0.00 0.00 46.23 3.16
4732 7180 0.250901 AGAAACCAGCGGATGCAGTT 60.251 50.000 0.00 0.00 46.23 3.16
4733 7181 0.957395 CAGAAACCAGCGGATGCAGT 60.957 55.000 0.00 0.00 46.23 4.40
4734 7182 1.651240 CCAGAAACCAGCGGATGCAG 61.651 60.000 0.00 0.00 46.23 4.41
4735 7183 1.675310 CCAGAAACCAGCGGATGCA 60.675 57.895 0.00 0.00 46.23 3.96
4736 7184 0.960364 TTCCAGAAACCAGCGGATGC 60.960 55.000 1.50 0.00 43.24 3.91
4737 7185 0.804989 GTTCCAGAAACCAGCGGATG 59.195 55.000 1.50 0.00 31.20 3.51
4738 7186 0.400213 TGTTCCAGAAACCAGCGGAT 59.600 50.000 1.50 0.00 37.03 4.18
4739 7187 0.181587 TTGTTCCAGAAACCAGCGGA 59.818 50.000 1.50 0.00 37.03 5.54
4740 7188 1.200020 GATTGTTCCAGAAACCAGCGG 59.800 52.381 0.00 0.00 37.03 5.52
4741 7189 1.135972 CGATTGTTCCAGAAACCAGCG 60.136 52.381 0.00 0.00 36.32 5.18
4742 7190 1.401539 GCGATTGTTCCAGAAACCAGC 60.402 52.381 0.00 0.00 37.03 4.85
4743 7191 1.135972 CGCGATTGTTCCAGAAACCAG 60.136 52.381 0.00 0.00 37.03 4.00
4744 7192 0.871722 CGCGATTGTTCCAGAAACCA 59.128 50.000 0.00 0.00 37.03 3.67
4745 7193 0.872388 ACGCGATTGTTCCAGAAACC 59.128 50.000 15.93 0.00 37.03 3.27
4746 7194 1.529438 TGACGCGATTGTTCCAGAAAC 59.471 47.619 15.93 0.00 38.43 2.78
4747 7195 1.529438 GTGACGCGATTGTTCCAGAAA 59.471 47.619 15.93 0.00 0.00 2.52
4748 7196 1.144969 GTGACGCGATTGTTCCAGAA 58.855 50.000 15.93 0.00 0.00 3.02
4749 7197 0.032815 TGTGACGCGATTGTTCCAGA 59.967 50.000 15.93 0.00 0.00 3.86
4750 7198 0.163788 GTGTGACGCGATTGTTCCAG 59.836 55.000 15.93 0.00 0.00 3.86
4751 7199 1.225376 GGTGTGACGCGATTGTTCCA 61.225 55.000 15.93 0.00 0.00 3.53
4752 7200 0.949105 AGGTGTGACGCGATTGTTCC 60.949 55.000 15.93 8.00 0.00 3.62
4753 7201 0.438830 GAGGTGTGACGCGATTGTTC 59.561 55.000 15.93 0.00 0.00 3.18
4754 7202 0.949105 GGAGGTGTGACGCGATTGTT 60.949 55.000 15.93 0.00 0.00 2.83
4755 7203 1.374252 GGAGGTGTGACGCGATTGT 60.374 57.895 15.93 0.00 0.00 2.71
4756 7204 1.078759 GAGGAGGTGTGACGCGATTG 61.079 60.000 15.93 0.00 0.00 2.67
4757 7205 1.215647 GAGGAGGTGTGACGCGATT 59.784 57.895 15.93 0.00 0.00 3.34
4758 7206 0.393944 TAGAGGAGGTGTGACGCGAT 60.394 55.000 15.93 0.00 0.00 4.58
4759 7207 0.393944 ATAGAGGAGGTGTGACGCGA 60.394 55.000 15.93 0.00 0.00 5.87
4760 7208 0.456221 AATAGAGGAGGTGTGACGCG 59.544 55.000 3.53 3.53 0.00 6.01
4761 7209 1.751924 AGAATAGAGGAGGTGTGACGC 59.248 52.381 0.00 0.00 0.00 5.19
4762 7210 3.775202 CAAGAATAGAGGAGGTGTGACG 58.225 50.000 0.00 0.00 0.00 4.35
4763 7211 3.526534 GCAAGAATAGAGGAGGTGTGAC 58.473 50.000 0.00 0.00 0.00 3.67
4764 7212 2.501723 GGCAAGAATAGAGGAGGTGTGA 59.498 50.000 0.00 0.00 0.00 3.58
4765 7213 2.237143 TGGCAAGAATAGAGGAGGTGTG 59.763 50.000 0.00 0.00 0.00 3.82
4766 7214 2.551270 TGGCAAGAATAGAGGAGGTGT 58.449 47.619 0.00 0.00 0.00 4.16
4767 7215 3.118112 ACATGGCAAGAATAGAGGAGGTG 60.118 47.826 0.00 0.00 0.00 4.00
4768 7216 3.118531 ACATGGCAAGAATAGAGGAGGT 58.881 45.455 0.00 0.00 0.00 3.85
4769 7217 3.853355 ACATGGCAAGAATAGAGGAGG 57.147 47.619 0.00 0.00 0.00 4.30
4770 7218 3.314635 GCAACATGGCAAGAATAGAGGAG 59.685 47.826 0.00 0.00 0.00 3.69
4771 7219 3.282021 GCAACATGGCAAGAATAGAGGA 58.718 45.455 0.00 0.00 0.00 3.71
4772 7220 3.018856 TGCAACATGGCAAGAATAGAGG 58.981 45.455 0.00 0.00 41.65 3.69
4783 7231 2.657829 TGGCACATGCAACATGGC 59.342 55.556 11.91 12.97 44.36 4.40
4810 7258 1.163554 CCTCTGTCTTGGCTCTTTGC 58.836 55.000 0.00 0.00 41.94 3.68
4811 7259 1.163554 GCCTCTGTCTTGGCTCTTTG 58.836 55.000 0.00 0.00 45.26 2.77
4812 7260 3.641017 GCCTCTGTCTTGGCTCTTT 57.359 52.632 0.00 0.00 45.26 2.52
4818 7266 0.972134 TGTCTCAGCCTCTGTCTTGG 59.028 55.000 0.00 0.00 32.61 3.61
4819 7267 2.036992 ACTTGTCTCAGCCTCTGTCTTG 59.963 50.000 0.00 0.00 32.61 3.02
4820 7268 2.036992 CACTTGTCTCAGCCTCTGTCTT 59.963 50.000 0.00 0.00 32.61 3.01
4821 7269 1.617850 CACTTGTCTCAGCCTCTGTCT 59.382 52.381 0.00 0.00 32.61 3.41
4822 7270 1.615883 TCACTTGTCTCAGCCTCTGTC 59.384 52.381 0.00 0.00 32.61 3.51
4823 7271 1.709578 TCACTTGTCTCAGCCTCTGT 58.290 50.000 0.00 0.00 32.61 3.41
4824 7272 2.411904 GTTCACTTGTCTCAGCCTCTG 58.588 52.381 0.00 0.00 0.00 3.35
4825 7273 1.000283 CGTTCACTTGTCTCAGCCTCT 60.000 52.381 0.00 0.00 0.00 3.69
4826 7274 1.269831 ACGTTCACTTGTCTCAGCCTC 60.270 52.381 0.00 0.00 0.00 4.70
4827 7275 0.753262 ACGTTCACTTGTCTCAGCCT 59.247 50.000 0.00 0.00 0.00 4.58
4828 7276 1.583054 AACGTTCACTTGTCTCAGCC 58.417 50.000 0.00 0.00 0.00 4.85
4829 7277 3.675467 AAAACGTTCACTTGTCTCAGC 57.325 42.857 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.