Multiple sequence alignment - TraesCS7B01G116000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G116000 chr7B 100.000 5995 0 0 1 5995 134563874 134557880 0.000000e+00 11071.0
1 TraesCS7B01G116000 chr7B 84.227 1287 188 12 3808 5088 151430472 151429195 0.000000e+00 1238.0
2 TraesCS7B01G116000 chr7B 85.935 583 70 11 2738 3314 151431731 151431155 3.970000e-171 612.0
3 TraesCS7B01G116000 chr7B 80.912 351 50 11 1048 1397 151433435 151433101 1.660000e-65 261.0
4 TraesCS7B01G116000 chr7A 95.368 3411 128 9 2593 5995 171387634 171384246 0.000000e+00 5397.0
5 TraesCS7B01G116000 chr7A 91.811 2027 86 32 563 2541 171389627 171387633 0.000000e+00 2750.0
6 TraesCS7B01G116000 chr7A 84.157 1275 182 12 3813 5079 188660697 188661959 0.000000e+00 1218.0
7 TraesCS7B01G116000 chr7A 88.007 542 54 9 2738 3273 188659476 188660012 1.100000e-176 630.0
8 TraesCS7B01G116000 chr7A 79.846 521 55 31 3 495 171390111 171389613 9.630000e-88 335.0
9 TraesCS7B01G116000 chr7A 81.935 310 43 9 1090 1397 188657973 188658271 3.590000e-62 250.0
10 TraesCS7B01G116000 chr7A 86.170 94 4 5 3493 3578 686024594 686024502 6.400000e-15 93.5
11 TraesCS7B01G116000 chr7D 94.805 3407 125 12 2593 5995 169389297 169385939 0.000000e+00 5264.0
12 TraesCS7B01G116000 chr7D 92.941 2295 90 42 288 2541 169391559 169389296 0.000000e+00 3275.0
13 TraesCS7B01G116000 chr7D 84.774 1215 170 11 3813 5022 183027056 183025852 0.000000e+00 1205.0
14 TraesCS7B01G116000 chr7D 86.341 593 64 13 2738 3322 183028276 183027693 1.100000e-176 630.0
15 TraesCS7B01G116000 chr7D 85.801 331 15 6 1 309 169398827 169398507 7.500000e-84 322.0
16 TraesCS7B01G116000 chr7D 80.966 352 48 15 1048 1397 183030206 183029872 1.660000e-65 261.0
17 TraesCS7B01G116000 chr7D 90.769 65 5 1 3514 3578 593248365 593248302 1.070000e-12 86.1
18 TraesCS7B01G116000 chr6B 84.186 215 25 8 1187 1396 569820899 569821109 3.660000e-47 200.0
19 TraesCS7B01G116000 chr6A 87.079 178 21 2 1223 1399 522641405 522641229 3.660000e-47 200.0
20 TraesCS7B01G116000 chr6D 86.517 178 22 2 1223 1399 381369286 381369110 1.700000e-45 195.0
21 TraesCS7B01G116000 chr1B 82.902 193 24 5 3393 3576 198639303 198639495 1.340000e-36 165.0
22 TraesCS7B01G116000 chr4B 79.688 192 33 4 3392 3578 529405167 529405357 3.770000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G116000 chr7B 134557880 134563874 5994 True 11071.000000 11071 100.000000 1 5995 1 chr7B.!!$R1 5994
1 TraesCS7B01G116000 chr7B 151429195 151433435 4240 True 703.666667 1238 83.691333 1048 5088 3 chr7B.!!$R2 4040
2 TraesCS7B01G116000 chr7A 171384246 171390111 5865 True 2827.333333 5397 89.008333 3 5995 3 chr7A.!!$R2 5992
3 TraesCS7B01G116000 chr7A 188657973 188661959 3986 False 699.333333 1218 84.699667 1090 5079 3 chr7A.!!$F1 3989
4 TraesCS7B01G116000 chr7D 169385939 169391559 5620 True 4269.500000 5264 93.873000 288 5995 2 chr7D.!!$R3 5707
5 TraesCS7B01G116000 chr7D 183025852 183030206 4354 True 698.666667 1205 84.027000 1048 5022 3 chr7D.!!$R4 3974

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 102 0.673644 ACAGCATAGTGAACGGTGCC 60.674 55.0 8.74 0.0 38.31 5.01 F
114 116 1.019278 CGGTGCCGAACAGTAATGCT 61.019 55.0 4.35 0.0 42.83 3.79 F
462 488 1.117994 TTGGCATCACAAAACCAGCA 58.882 45.0 0.00 0.0 32.79 4.41 F
1439 1494 0.897863 CTGCCATTTTCCCCGTTCCA 60.898 55.0 0.00 0.0 0.00 3.53 F
3034 3844 0.106469 TGGCAAAGCTACACCCAACA 60.106 50.0 0.00 0.0 0.00 3.33 F
3520 4945 0.465460 TTGGCAGTTGGGACACTCAC 60.465 55.0 0.00 0.0 39.29 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1421 1476 0.252012 ATGGAACGGGGAAAATGGCA 60.252 50.000 0.00 0.00 0.00 4.92 R
1439 1494 0.884704 AGCACAGAAACCGTCGCAAT 60.885 50.000 0.00 0.00 0.00 3.56 R
1580 1641 1.202110 GCTCAAGTCATTGACGCATGG 60.202 52.381 11.01 7.44 40.54 3.66 R
3368 4793 0.381801 CCCTACGGCATTGCAATGAC 59.618 55.000 37.36 34.60 41.13 3.06 R
4601 6032 1.139095 GGTAGGCTCCGTCACTTCG 59.861 63.158 0.00 0.00 0.00 3.79 R
5420 6854 0.590195 CACACCTTTGAGCAGAGTGC 59.410 55.000 0.00 0.00 45.46 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.611751 GGGTGATGTTTTGTTGCCAAAC 59.388 45.455 0.00 0.00 40.19 2.93
47 48 7.206981 TGCCAAACAAAATTTCAAGTTCAAA 57.793 28.000 0.00 0.00 0.00 2.69
48 49 7.824672 TGCCAAACAAAATTTCAAGTTCAAAT 58.175 26.923 0.00 0.00 0.00 2.32
86 87 9.405587 TGTGAGCTATAAAAATAACAAAACAGC 57.594 29.630 0.00 0.00 0.00 4.40
87 88 9.405587 GTGAGCTATAAAAATAACAAAACAGCA 57.594 29.630 0.00 0.00 0.00 4.41
97 98 3.896648 ACAAAACAGCATAGTGAACGG 57.103 42.857 0.00 0.00 0.00 4.44
98 99 3.211045 ACAAAACAGCATAGTGAACGGT 58.789 40.909 0.00 0.00 0.00 4.83
99 100 3.003275 ACAAAACAGCATAGTGAACGGTG 59.997 43.478 0.00 0.00 0.00 4.94
101 102 0.673644 ACAGCATAGTGAACGGTGCC 60.674 55.000 8.74 0.00 38.31 5.01
102 103 1.447838 AGCATAGTGAACGGTGCCG 60.448 57.895 9.29 9.29 46.03 5.69
111 113 1.270412 TGAACGGTGCCGAACAGTAAT 60.270 47.619 18.16 0.00 42.83 1.89
112 114 1.127951 GAACGGTGCCGAACAGTAATG 59.872 52.381 18.16 0.00 42.83 1.90
113 115 1.296056 ACGGTGCCGAACAGTAATGC 61.296 55.000 18.16 0.00 42.83 3.56
114 116 1.019278 CGGTGCCGAACAGTAATGCT 61.019 55.000 4.35 0.00 42.83 3.79
126 128 8.009974 CCGAACAGTAATGCTACTATTAATTGC 58.990 37.037 0.00 0.00 36.14 3.56
144 146 9.616634 ATTAATTGCTGAATATCTTGTAATGCG 57.383 29.630 0.00 0.00 0.00 4.73
145 147 4.472691 TGCTGAATATCTTGTAATGCGC 57.527 40.909 0.00 0.00 0.00 6.09
162 184 3.791245 TGCGCTTCAAGTTGGAATTTTT 58.209 36.364 9.73 0.00 0.00 1.94
170 192 7.011295 GCTTCAAGTTGGAATTTTTCATGACAA 59.989 33.333 2.34 0.00 0.00 3.18
182 204 8.776376 ATTTTTCATGACAATAAACCATCACC 57.224 30.769 0.00 0.00 0.00 4.02
183 205 5.913137 TTCATGACAATAAACCATCACCC 57.087 39.130 0.00 0.00 0.00 4.61
184 206 5.191727 TCATGACAATAAACCATCACCCT 57.808 39.130 0.00 0.00 0.00 4.34
187 209 5.255397 TGACAATAAACCATCACCCTCTT 57.745 39.130 0.00 0.00 0.00 2.85
189 211 6.785076 TGACAATAAACCATCACCCTCTTAA 58.215 36.000 0.00 0.00 0.00 1.85
190 212 6.657541 TGACAATAAACCATCACCCTCTTAAC 59.342 38.462 0.00 0.00 0.00 2.01
191 213 6.548321 ACAATAAACCATCACCCTCTTAACA 58.452 36.000 0.00 0.00 0.00 2.41
192 214 7.182060 ACAATAAACCATCACCCTCTTAACAT 58.818 34.615 0.00 0.00 0.00 2.71
193 215 7.339466 ACAATAAACCATCACCCTCTTAACATC 59.661 37.037 0.00 0.00 0.00 3.06
236 258 5.346181 TTTTAAAACCTCCAAACCCACAG 57.654 39.130 0.00 0.00 0.00 3.66
237 259 2.838637 AAAACCTCCAAACCCACAGA 57.161 45.000 0.00 0.00 0.00 3.41
238 260 2.838637 AAACCTCCAAACCCACAGAA 57.161 45.000 0.00 0.00 0.00 3.02
239 261 2.364972 AACCTCCAAACCCACAGAAG 57.635 50.000 0.00 0.00 0.00 2.85
244 266 3.068165 CCTCCAAACCCACAGAAGTTTTC 59.932 47.826 0.00 0.00 34.02 2.29
258 280 6.813152 ACAGAAGTTTTCTTTGAATGTTGGTG 59.187 34.615 0.00 0.00 40.61 4.17
260 282 7.331687 CAGAAGTTTTCTTTGAATGTTGGTGTT 59.668 33.333 0.00 0.00 40.61 3.32
264 286 7.823799 AGTTTTCTTTGAATGTTGGTGTTCATT 59.176 29.630 0.00 0.00 34.60 2.57
278 301 8.739972 GTTGGTGTTCATTATATTCTCCAAAGT 58.260 33.333 0.00 0.00 34.84 2.66
304 327 3.780294 TGTATCCTGGTGCAATTACCTCT 59.220 43.478 0.00 0.00 41.43 3.69
305 328 4.227300 TGTATCCTGGTGCAATTACCTCTT 59.773 41.667 0.00 0.00 41.43 2.85
306 329 3.806949 TCCTGGTGCAATTACCTCTTT 57.193 42.857 0.00 0.00 41.43 2.52
310 333 4.039124 CCTGGTGCAATTACCTCTTTTTGT 59.961 41.667 0.00 0.00 41.43 2.83
431 457 1.598882 GAATCGAAAGGGGGCAGATC 58.401 55.000 0.00 0.00 0.00 2.75
459 485 2.492012 GCAATTGGCATCACAAAACCA 58.508 42.857 7.72 0.00 43.97 3.67
460 486 2.481185 GCAATTGGCATCACAAAACCAG 59.519 45.455 7.72 0.00 43.97 4.00
461 487 2.460757 ATTGGCATCACAAAACCAGC 57.539 45.000 0.00 0.00 33.48 4.85
462 488 1.117994 TTGGCATCACAAAACCAGCA 58.882 45.000 0.00 0.00 32.79 4.41
527 553 5.619625 GTGACCTACGTTGAACTAGTAGT 57.380 43.478 0.00 0.00 36.91 2.73
528 554 6.727824 GTGACCTACGTTGAACTAGTAGTA 57.272 41.667 2.50 0.00 36.91 1.82
529 555 6.770076 GTGACCTACGTTGAACTAGTAGTAG 58.230 44.000 2.50 2.87 36.91 2.57
535 561 4.819700 GTTGAACTAGTAGTAGCAACGC 57.180 45.455 22.62 9.99 35.48 4.84
541 567 2.386661 AGTAGTAGCAACGCAGCAAT 57.613 45.000 2.40 0.00 36.85 3.56
550 576 2.527487 GCAACGCAGCAATAATTCTTCG 59.473 45.455 0.00 0.00 0.00 3.79
561 587 8.133627 CAGCAATAATTCTTCGGATCATCTTTT 58.866 33.333 0.00 0.00 0.00 2.27
702 732 2.584418 CACCTCTCGCAGCGGATG 60.584 66.667 16.42 10.53 0.00 3.51
879 920 2.828520 ACCAGAGTCCATCCATATAGCG 59.171 50.000 0.00 0.00 0.00 4.26
921 965 2.345991 CGACCAGGAAAGGCCGAA 59.654 61.111 0.00 0.00 43.43 4.30
1104 1156 3.444805 GTCCCGCTGCTCTCGTCT 61.445 66.667 0.00 0.00 0.00 4.18
1429 1484 2.048603 GCCGCTCCTCTGCCATTTT 61.049 57.895 0.00 0.00 0.00 1.82
1439 1494 0.897863 CTGCCATTTTCCCCGTTCCA 60.898 55.000 0.00 0.00 0.00 3.53
1493 1548 2.680066 GAGGTCTCGGGGAAAAGGA 58.320 57.895 0.00 0.00 0.00 3.36
1494 1549 0.981943 GAGGTCTCGGGGAAAAGGAA 59.018 55.000 0.00 0.00 0.00 3.36
1495 1550 1.350019 GAGGTCTCGGGGAAAAGGAAA 59.650 52.381 0.00 0.00 0.00 3.13
1496 1551 1.778484 AGGTCTCGGGGAAAAGGAAAA 59.222 47.619 0.00 0.00 0.00 2.29
1577 1638 2.487762 CTGTCGTGTGCCCATTTTATGT 59.512 45.455 0.00 0.00 0.00 2.29
1579 1640 2.747446 GTCGTGTGCCCATTTTATGTCT 59.253 45.455 0.00 0.00 0.00 3.41
1580 1641 3.006940 TCGTGTGCCCATTTTATGTCTC 58.993 45.455 0.00 0.00 0.00 3.36
1581 1642 2.097466 CGTGTGCCCATTTTATGTCTCC 59.903 50.000 0.00 0.00 0.00 3.71
1582 1643 3.088532 GTGTGCCCATTTTATGTCTCCA 58.911 45.455 0.00 0.00 0.00 3.86
1586 1647 2.287788 GCCCATTTTATGTCTCCATGCG 60.288 50.000 0.00 0.00 32.29 4.73
1590 1651 4.096231 CCATTTTATGTCTCCATGCGTCAA 59.904 41.667 0.00 0.00 32.29 3.18
1654 1716 3.181507 CCGTGCGATTCTGATCACATTTT 60.182 43.478 0.00 0.00 32.33 1.82
1655 1717 3.782369 CGTGCGATTCTGATCACATTTTG 59.218 43.478 0.00 0.00 32.33 2.44
1656 1718 3.545078 GTGCGATTCTGATCACATTTTGC 59.455 43.478 0.00 0.00 32.33 3.68
1657 1719 3.111098 GCGATTCTGATCACATTTTGCC 58.889 45.455 0.00 0.00 32.33 4.52
1658 1720 3.699067 CGATTCTGATCACATTTTGCCC 58.301 45.455 0.00 0.00 32.33 5.36
1659 1721 3.129113 CGATTCTGATCACATTTTGCCCA 59.871 43.478 0.00 0.00 32.33 5.36
1660 1722 4.202080 CGATTCTGATCACATTTTGCCCAT 60.202 41.667 0.00 0.00 32.33 4.00
1661 1723 5.667466 GATTCTGATCACATTTTGCCCATT 58.333 37.500 0.00 0.00 32.33 3.16
1662 1724 5.486735 TTCTGATCACATTTTGCCCATTT 57.513 34.783 0.00 0.00 0.00 2.32
1665 1727 7.185318 TCTGATCACATTTTGCCCATTTTAT 57.815 32.000 0.00 0.00 0.00 1.40
1671 1733 8.303780 TCACATTTTGCCCATTTTATATCTCA 57.696 30.769 0.00 0.00 0.00 3.27
1672 1734 8.756927 TCACATTTTGCCCATTTTATATCTCAA 58.243 29.630 0.00 0.00 0.00 3.02
1673 1735 9.381033 CACATTTTGCCCATTTTATATCTCAAA 57.619 29.630 0.00 0.00 0.00 2.69
1805 1891 5.123502 CACAGAGAATTTGTCTTCCATCAGG 59.876 44.000 0.00 0.00 36.41 3.86
1869 1955 1.587034 GTGCACGCTACTATCGAAACC 59.413 52.381 0.00 0.00 0.00 3.27
1870 1956 1.202817 TGCACGCTACTATCGAAACCA 59.797 47.619 0.00 0.00 0.00 3.67
1877 1963 4.023963 CGCTACTATCGAAACCAGAGATGA 60.024 45.833 0.00 0.00 0.00 2.92
1878 1964 5.216648 GCTACTATCGAAACCAGAGATGAC 58.783 45.833 0.00 0.00 0.00 3.06
1900 1987 9.784531 ATGACCTTGTTGATAGGTAGATTAATG 57.215 33.333 0.00 0.00 45.88 1.90
1901 1988 7.715249 TGACCTTGTTGATAGGTAGATTAATGC 59.285 37.037 0.00 0.00 45.88 3.56
1923 2041 5.238432 TGCAGCGGTGTTCCTATAATTTATG 59.762 40.000 17.07 0.00 0.00 1.90
1924 2042 5.238650 GCAGCGGTGTTCCTATAATTTATGT 59.761 40.000 17.07 0.00 0.00 2.29
1925 2043 6.425721 GCAGCGGTGTTCCTATAATTTATGTA 59.574 38.462 17.07 0.00 0.00 2.29
1926 2044 7.570691 GCAGCGGTGTTCCTATAATTTATGTAC 60.571 40.741 17.07 0.00 0.00 2.90
1951 2660 1.927174 CGCCGGTAGATTCTGTCTTTG 59.073 52.381 1.90 0.00 38.42 2.77
1955 2664 2.932614 CGGTAGATTCTGTCTTTGCTGG 59.067 50.000 0.00 0.00 38.42 4.85
2017 2749 9.185680 TCTAGTTGCCTTTTCTTTAAGAAAACT 57.814 29.630 23.84 21.24 45.99 2.66
2051 2787 3.508840 GGGCGATGGAAAGCACCG 61.509 66.667 0.00 0.00 34.54 4.94
2099 2835 0.676782 GGGACCACGTTGATCTTGGG 60.677 60.000 0.00 0.00 39.43 4.12
2272 3027 7.239271 GTCTTCCATAATATCATTGTGATGCG 58.761 38.462 2.82 0.00 37.70 4.73
2395 3167 8.795842 TCCGTATATGAAGTGGTTATGTTTTT 57.204 30.769 0.00 0.00 0.00 1.94
2396 3168 8.885722 TCCGTATATGAAGTGGTTATGTTTTTC 58.114 33.333 0.00 0.00 0.00 2.29
2541 3313 1.069596 ACAGATGCACACTCGCACA 59.930 52.632 0.00 0.00 46.56 4.57
2562 3334 4.201910 ACATTATGCAGTTCGTAACATGGC 60.202 41.667 0.00 0.00 0.00 4.40
2563 3335 2.113860 ATGCAGTTCGTAACATGGCT 57.886 45.000 0.00 0.00 0.00 4.75
2564 3336 1.155889 TGCAGTTCGTAACATGGCTG 58.844 50.000 0.00 0.00 0.00 4.85
2566 3338 1.128692 GCAGTTCGTAACATGGCTGAC 59.871 52.381 0.00 0.00 0.00 3.51
2567 3339 1.390123 CAGTTCGTAACATGGCTGACG 59.610 52.381 0.00 1.06 36.66 4.35
2568 3340 1.000506 AGTTCGTAACATGGCTGACGT 59.999 47.619 0.00 0.00 36.69 4.34
2569 3341 1.126113 GTTCGTAACATGGCTGACGTG 59.874 52.381 0.00 0.00 41.98 4.49
2570 3342 1.011968 TCGTAACATGGCTGACGTGC 61.012 55.000 1.75 0.00 39.81 5.34
2571 3343 1.288419 CGTAACATGGCTGACGTGCA 61.288 55.000 1.75 0.00 39.81 4.57
2582 3367 2.917971 GCTGACGTGCAGTAGTTCTTAG 59.082 50.000 13.91 0.00 46.62 2.18
2589 3374 5.103000 CGTGCAGTAGTTCTTAGTTAGCAT 58.897 41.667 0.00 0.00 0.00 3.79
2590 3375 5.577164 CGTGCAGTAGTTCTTAGTTAGCATT 59.423 40.000 0.00 0.00 0.00 3.56
2686 3481 9.522804 CAGTTATTTATCACTCTGTCTTACCTC 57.477 37.037 0.00 0.00 0.00 3.85
2735 3544 5.530915 TGTACACCTGCAAATAATAGGCATC 59.469 40.000 0.00 0.00 36.87 3.91
3007 3817 9.906660 TTATGTTTTTGACTGCTAGGTTTTATG 57.093 29.630 0.00 0.00 0.00 1.90
3034 3844 0.106469 TGGCAAAGCTACACCCAACA 60.106 50.000 0.00 0.00 0.00 3.33
3225 4035 1.093159 GCTGGAGAGGATTTGCACAG 58.907 55.000 0.00 0.00 0.00 3.66
3285 4095 0.848735 GAAGGTAATACCCCACCCCC 59.151 60.000 5.71 0.00 39.75 5.40
3288 4098 0.625387 GGTAATACCCCACCCCCACT 60.625 60.000 0.00 0.00 30.04 4.00
3333 4757 9.302345 AGAATCACAGTATTTGTCAACTATACG 57.698 33.333 3.00 0.00 38.16 3.06
3462 4887 5.106908 GCCACATCACTCTAAAAGAACAGTC 60.107 44.000 0.00 0.00 0.00 3.51
3516 4941 1.168714 GATCTTGGCAGTTGGGACAC 58.831 55.000 0.00 0.00 39.29 3.67
3520 4945 0.465460 TTGGCAGTTGGGACACTCAC 60.465 55.000 0.00 0.00 39.29 3.51
3652 5079 3.457610 AACTGTGGCAGAAAACCAATG 57.542 42.857 2.91 0.00 39.39 2.82
3696 5123 3.958704 TGGTTTATGCACTTCAACAACG 58.041 40.909 0.00 0.00 0.00 4.10
3715 5142 3.705604 ACGTTTGGATTTTGCAACTCAG 58.294 40.909 0.00 0.00 0.00 3.35
3793 5220 2.038387 AGTAATACCCGCAGCAAAGG 57.962 50.000 0.00 0.00 0.00 3.11
3807 5234 0.893727 CAAAGGGCGGGCTTTACACT 60.894 55.000 0.00 0.00 0.00 3.55
3903 5330 6.263842 TGAAATGCATGGAGTATGAAAGGATC 59.736 38.462 0.00 0.00 39.21 3.36
4041 5468 8.329502 AGCTAACACTTCTATTTGGGTTATCTT 58.670 33.333 0.00 0.00 0.00 2.40
4042 5469 8.398665 GCTAACACTTCTATTTGGGTTATCTTG 58.601 37.037 0.00 0.00 0.00 3.02
4152 5581 2.350057 GGAACTATCCTTGGAAGGGC 57.650 55.000 5.58 0.00 46.47 5.19
4281 5710 6.127479 ACAACCTGTTGAAGTTCTGCATTTAA 60.127 34.615 16.41 0.00 42.93 1.52
4289 5718 9.774742 GTTGAAGTTCTGCATTTAATACCTAAG 57.225 33.333 4.17 0.00 0.00 2.18
4601 6032 4.723248 CGGTGGCAAAAGAGAATAAGAAC 58.277 43.478 0.00 0.00 0.00 3.01
4709 6140 6.004574 TGATTCATCAGCTACTATAGACGGT 58.995 40.000 6.78 0.00 32.11 4.83
4719 6150 5.007136 GCTACTATAGACGGTTACAAGACGT 59.993 44.000 6.78 0.00 44.35 4.34
4736 6167 0.249911 CGTTACTATCCTGGCCTGCC 60.250 60.000 3.32 0.00 0.00 4.85
5008 6439 1.840741 GAGTTGACATCGACGATGACG 59.159 52.381 37.26 16.95 42.09 4.35
5038 6469 0.895559 CCTCCACCTGGAAACCTTGC 60.896 60.000 0.00 0.00 44.91 4.01
5047 6478 1.239347 GGAAACCTTGCCACTCACTC 58.761 55.000 0.00 0.00 0.00 3.51
5440 6874 1.233019 CACTCTGCTCAAAGGTGTGG 58.767 55.000 0.00 0.00 0.00 4.17
5441 6875 0.109342 ACTCTGCTCAAAGGTGTGGG 59.891 55.000 0.00 0.00 0.00 4.61
5463 6897 1.774110 TGCTTTCCATGTGTTGGTGT 58.226 45.000 0.00 0.00 46.52 4.16
5470 6904 1.480137 CCATGTGTTGGTGTGGTTTGT 59.520 47.619 0.00 0.00 40.99 2.83
5518 6952 8.801715 ACTTATGTTGCTTGAGTTAAACATTG 57.198 30.769 5.32 3.01 41.94 2.82
5529 6963 5.825679 TGAGTTAAACATTGTGTGTAGCCTT 59.174 36.000 0.00 0.00 41.14 4.35
5544 6978 0.582005 GCCTTCACGCGATATTCCAC 59.418 55.000 15.93 0.00 0.00 4.02
5550 6984 0.250793 ACGCGATATTCCACCAACCA 59.749 50.000 15.93 0.00 0.00 3.67
5551 6985 1.339247 ACGCGATATTCCACCAACCAA 60.339 47.619 15.93 0.00 0.00 3.67
5552 6986 1.740585 CGCGATATTCCACCAACCAAA 59.259 47.619 0.00 0.00 0.00 3.28
5553 6987 2.162608 CGCGATATTCCACCAACCAAAA 59.837 45.455 0.00 0.00 0.00 2.44
5554 6988 3.366476 CGCGATATTCCACCAACCAAAAA 60.366 43.478 0.00 0.00 0.00 1.94
5690 7126 8.512966 TGAGATATACTCTACAGCATATCCAC 57.487 38.462 0.00 0.00 45.13 4.02
5718 7154 3.892918 CAGAGTTCTGCTTCTTTGGTG 57.107 47.619 0.00 0.00 37.15 4.17
5784 7220 5.912892 TCACCTTTCTTCCAATTTGGTTTC 58.087 37.500 14.98 0.00 39.03 2.78
5920 7356 5.009610 TCTGTGCCATTTAAAGAAGTTGACC 59.990 40.000 0.00 0.00 0.00 4.02
5922 7358 4.023536 GTGCCATTTAAAGAAGTTGACCGA 60.024 41.667 0.00 0.00 0.00 4.69
5945 7381 3.376546 GCAATGCTCTCGAAAGGAAGAAT 59.623 43.478 0.00 0.00 0.00 2.40
5969 7405 0.825010 CCCTGCTTGCTTTCTGTGGT 60.825 55.000 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.457466 ACAAAACATCACCCTCTTAACGT 58.543 39.130 0.00 0.00 0.00 3.99
1 2 5.212194 CAACAAAACATCACCCTCTTAACG 58.788 41.667 0.00 0.00 0.00 3.18
21 22 6.606768 TGAACTTGAAATTTTGTTTGGCAAC 58.393 32.000 0.00 0.00 36.72 4.17
55 56 8.815565 TTGTTATTTTTATAGCTCACATCCCA 57.184 30.769 0.00 0.00 0.00 4.37
83 84 1.695893 CGGCACCGTTCACTATGCTG 61.696 60.000 0.00 0.00 38.18 4.41
84 85 1.447838 CGGCACCGTTCACTATGCT 60.448 57.895 0.00 0.00 38.18 3.79
85 86 1.017177 TTCGGCACCGTTCACTATGC 61.017 55.000 9.23 0.00 40.74 3.14
86 87 0.719465 GTTCGGCACCGTTCACTATG 59.281 55.000 9.23 0.00 40.74 2.23
87 88 0.319083 TGTTCGGCACCGTTCACTAT 59.681 50.000 9.23 0.00 40.74 2.12
88 89 0.319211 CTGTTCGGCACCGTTCACTA 60.319 55.000 9.23 0.00 40.74 2.74
89 90 1.594293 CTGTTCGGCACCGTTCACT 60.594 57.895 9.23 0.00 40.74 3.41
90 91 0.598158 TACTGTTCGGCACCGTTCAC 60.598 55.000 9.23 5.54 40.74 3.18
91 92 0.104487 TTACTGTTCGGCACCGTTCA 59.896 50.000 9.23 8.57 40.74 3.18
92 93 1.127951 CATTACTGTTCGGCACCGTTC 59.872 52.381 9.23 4.35 40.74 3.95
94 95 1.296056 GCATTACTGTTCGGCACCGT 61.296 55.000 9.23 0.00 40.74 4.83
95 96 1.019278 AGCATTACTGTTCGGCACCG 61.019 55.000 1.73 1.73 41.35 4.94
97 98 2.618053 AGTAGCATTACTGTTCGGCAC 58.382 47.619 0.00 0.00 38.69 5.01
98 99 4.665833 ATAGTAGCATTACTGTTCGGCA 57.334 40.909 0.00 0.00 40.33 5.69
99 100 7.653767 ATTAATAGTAGCATTACTGTTCGGC 57.346 36.000 0.00 0.00 39.54 5.54
101 102 8.765219 AGCAATTAATAGTAGCATTACTGTTCG 58.235 33.333 0.00 0.00 39.54 3.95
102 103 9.869844 CAGCAATTAATAGTAGCATTACTGTTC 57.130 33.333 0.00 0.00 39.54 3.18
126 128 6.291067 TGAAGCGCATTACAAGATATTCAG 57.709 37.500 11.47 0.00 0.00 3.02
132 134 4.379813 CCAACTTGAAGCGCATTACAAGAT 60.380 41.667 28.15 19.86 41.16 2.40
134 136 3.058293 TCCAACTTGAAGCGCATTACAAG 60.058 43.478 23.40 23.40 43.30 3.16
139 141 3.665745 AATTCCAACTTGAAGCGCATT 57.334 38.095 11.47 0.00 0.00 3.56
140 142 3.665745 AAATTCCAACTTGAAGCGCAT 57.334 38.095 11.47 0.00 0.00 4.73
142 144 3.801594 TGAAAAATTCCAACTTGAAGCGC 59.198 39.130 0.00 0.00 0.00 5.92
143 145 5.691305 TCATGAAAAATTCCAACTTGAAGCG 59.309 36.000 0.00 0.00 0.00 4.68
144 146 6.479660 TGTCATGAAAAATTCCAACTTGAAGC 59.520 34.615 0.00 0.00 0.00 3.86
145 147 8.422973 TTGTCATGAAAAATTCCAACTTGAAG 57.577 30.769 0.00 0.00 0.00 3.02
162 184 5.044919 AGAGGGTGATGGTTTATTGTCATGA 60.045 40.000 0.00 0.00 0.00 3.07
170 192 7.092444 TGAGATGTTAAGAGGGTGATGGTTTAT 60.092 37.037 0.00 0.00 0.00 1.40
175 197 4.760530 TGAGATGTTAAGAGGGTGATGG 57.239 45.455 0.00 0.00 0.00 3.51
218 240 2.838637 TCTGTGGGTTTGGAGGTTTT 57.161 45.000 0.00 0.00 0.00 2.43
219 241 2.024369 ACTTCTGTGGGTTTGGAGGTTT 60.024 45.455 0.00 0.00 0.00 3.27
220 242 1.569072 ACTTCTGTGGGTTTGGAGGTT 59.431 47.619 0.00 0.00 0.00 3.50
223 245 3.954258 AGAAAACTTCTGTGGGTTTGGAG 59.046 43.478 0.00 0.00 38.91 3.86
232 254 6.813152 ACCAACATTCAAAGAAAACTTCTGTG 59.187 34.615 0.81 0.81 44.73 3.66
236 258 7.330700 TGAACACCAACATTCAAAGAAAACTTC 59.669 33.333 0.00 0.00 31.95 3.01
237 259 7.158021 TGAACACCAACATTCAAAGAAAACTT 58.842 30.769 0.00 0.00 31.95 2.66
238 260 6.696411 TGAACACCAACATTCAAAGAAAACT 58.304 32.000 0.00 0.00 31.95 2.66
239 261 6.959671 TGAACACCAACATTCAAAGAAAAC 57.040 33.333 0.00 0.00 31.95 2.43
264 286 9.613428 CAGGATACAACAACTTTGGAGAATATA 57.387 33.333 0.00 0.00 41.41 0.86
270 292 4.216257 CACCAGGATACAACAACTTTGGAG 59.784 45.833 0.00 0.00 41.41 3.86
278 301 4.461081 GGTAATTGCACCAGGATACAACAA 59.539 41.667 0.00 0.00 38.55 2.83
305 328 9.878667 TCGATCATAGAAATAGGTTGTACAAAA 57.121 29.630 10.51 0.00 0.00 2.44
306 329 9.878667 TTCGATCATAGAAATAGGTTGTACAAA 57.121 29.630 10.51 0.00 0.00 2.83
310 333 8.920174 TCCTTTCGATCATAGAAATAGGTTGTA 58.080 33.333 0.00 0.00 37.04 2.41
396 419 4.286707 TCGATTCCTCTGTCAAAGGGATA 58.713 43.478 0.00 0.00 31.83 2.59
398 421 2.536066 TCGATTCCTCTGTCAAAGGGA 58.464 47.619 0.00 0.00 34.46 4.20
404 427 1.555075 CCCCTTTCGATTCCTCTGTCA 59.445 52.381 0.00 0.00 0.00 3.58
431 457 1.002201 TGATGCCAATTGCTGTTTGGG 59.998 47.619 0.00 0.00 43.20 4.12
437 463 2.481185 GGTTTTGTGATGCCAATTGCTG 59.519 45.455 0.00 0.00 42.00 4.41
486 512 0.035056 CGGATTGGTTCTTCCTGCCT 60.035 55.000 0.00 0.00 37.07 4.75
527 553 4.494035 CGAAGAATTATTGCTGCGTTGCTA 60.494 41.667 0.00 0.00 0.00 3.49
528 554 3.728864 CGAAGAATTATTGCTGCGTTGCT 60.729 43.478 0.00 0.00 0.00 3.91
529 555 2.527487 CGAAGAATTATTGCTGCGTTGC 59.473 45.455 0.00 0.00 0.00 4.17
535 561 6.798315 AGATGATCCGAAGAATTATTGCTG 57.202 37.500 0.00 0.00 0.00 4.41
910 954 0.318699 GTGTTGCTTTCGGCCTTTCC 60.319 55.000 0.00 0.00 40.92 3.13
1421 1476 0.252012 ATGGAACGGGGAAAATGGCA 60.252 50.000 0.00 0.00 0.00 4.92
1429 1484 2.046700 GTCGCAATGGAACGGGGA 60.047 61.111 0.00 0.00 0.00 4.81
1439 1494 0.884704 AGCACAGAAACCGTCGCAAT 60.885 50.000 0.00 0.00 0.00 3.56
1491 1546 6.127730 TGTTGAAGAAAGTCAAGGAGTTTTCC 60.128 38.462 1.02 0.00 44.39 3.13
1492 1547 6.852664 TGTTGAAGAAAGTCAAGGAGTTTTC 58.147 36.000 1.02 0.00 38.17 2.29
1493 1548 6.834168 TGTTGAAGAAAGTCAAGGAGTTTT 57.166 33.333 1.02 0.00 38.17 2.43
1494 1549 7.410120 AATGTTGAAGAAAGTCAAGGAGTTT 57.590 32.000 0.00 0.00 38.17 2.66
1495 1550 6.039829 GGAATGTTGAAGAAAGTCAAGGAGTT 59.960 38.462 0.00 0.00 38.17 3.01
1496 1551 5.532779 GGAATGTTGAAGAAAGTCAAGGAGT 59.467 40.000 0.00 0.00 38.17 3.85
1577 1638 2.028203 TCAAGTCATTGACGCATGGAGA 60.028 45.455 11.01 1.12 40.54 3.71
1579 1640 2.349590 CTCAAGTCATTGACGCATGGA 58.650 47.619 11.01 5.28 40.54 3.41
1580 1641 1.202110 GCTCAAGTCATTGACGCATGG 60.202 52.381 11.01 7.44 40.54 3.66
1581 1642 1.465777 TGCTCAAGTCATTGACGCATG 59.534 47.619 11.01 11.37 40.96 4.06
1582 1643 1.812235 TGCTCAAGTCATTGACGCAT 58.188 45.000 11.01 0.00 40.96 4.73
1586 1647 3.076621 TCACCATGCTCAAGTCATTGAC 58.923 45.455 8.82 8.82 40.54 3.18
1590 1651 6.435277 AGTTAAAATCACCATGCTCAAGTCAT 59.565 34.615 0.00 0.00 0.00 3.06
1654 1716 5.207354 TGCCTTTGAGATATAAAATGGGCA 58.793 37.500 0.10 0.10 42.66 5.36
1655 1717 5.279156 CCTGCCTTTGAGATATAAAATGGGC 60.279 44.000 0.00 0.00 36.75 5.36
1656 1718 5.279156 GCCTGCCTTTGAGATATAAAATGGG 60.279 44.000 0.00 0.00 0.00 4.00
1657 1719 5.537674 AGCCTGCCTTTGAGATATAAAATGG 59.462 40.000 0.00 0.00 0.00 3.16
1658 1720 6.645790 AGCCTGCCTTTGAGATATAAAATG 57.354 37.500 0.00 0.00 0.00 2.32
1659 1721 8.220559 TCTAAGCCTGCCTTTGAGATATAAAAT 58.779 33.333 0.00 0.00 34.95 1.82
1660 1722 7.573710 TCTAAGCCTGCCTTTGAGATATAAAA 58.426 34.615 0.00 0.00 34.95 1.52
1661 1723 7.136822 TCTAAGCCTGCCTTTGAGATATAAA 57.863 36.000 0.00 0.00 34.95 1.40
1662 1724 6.747414 TCTAAGCCTGCCTTTGAGATATAA 57.253 37.500 0.00 0.00 34.95 0.98
1665 1727 5.636903 AATCTAAGCCTGCCTTTGAGATA 57.363 39.130 0.00 0.00 38.40 1.98
1671 1733 3.010584 TCCTCAAATCTAAGCCTGCCTTT 59.989 43.478 0.00 0.00 34.95 3.11
1672 1734 2.578021 TCCTCAAATCTAAGCCTGCCTT 59.422 45.455 0.00 0.00 37.57 4.35
1673 1735 2.172293 CTCCTCAAATCTAAGCCTGCCT 59.828 50.000 0.00 0.00 0.00 4.75
1805 1891 3.140325 TGGAAGGTCAATTGACAGGAC 57.860 47.619 33.42 22.31 46.47 3.85
1869 1955 5.350504 ACCTATCAACAAGGTCATCTCTG 57.649 43.478 0.00 0.00 44.20 3.35
1870 1956 6.436027 TCTACCTATCAACAAGGTCATCTCT 58.564 40.000 0.00 0.00 44.20 3.10
1878 1964 7.308229 GCTGCATTAATCTACCTATCAACAAGG 60.308 40.741 0.00 0.00 40.20 3.61
1900 1987 5.238650 ACATAAATTATAGGAACACCGCTGC 59.761 40.000 0.00 0.00 0.00 5.25
1901 1988 6.861065 ACATAAATTATAGGAACACCGCTG 57.139 37.500 0.00 0.00 0.00 5.18
1951 2660 2.755103 CCCAGAACCTAAACAATCCAGC 59.245 50.000 0.00 0.00 0.00 4.85
1955 2664 2.492088 GTGGCCCAGAACCTAAACAATC 59.508 50.000 0.00 0.00 0.00 2.67
2017 2749 6.878923 CCATCGCCCATAGATAAACTAATGAA 59.121 38.462 0.00 0.00 34.56 2.57
2099 2835 5.975939 CCGTATAGTAAGTTCTACAACAGGC 59.024 44.000 0.00 0.00 34.60 4.85
2272 3027 6.357367 ACCACTACCATTATGATTGACTTCC 58.643 40.000 0.00 0.00 0.00 3.46
2539 3311 4.201910 GCCATGTTACGAACTGCATAATGT 60.202 41.667 0.00 0.00 0.00 2.71
2541 3313 4.035558 CAGCCATGTTACGAACTGCATAAT 59.964 41.667 0.00 0.00 0.00 1.28
2553 3325 0.443869 CTGCACGTCAGCCATGTTAC 59.556 55.000 0.00 0.00 35.78 2.50
2563 3335 4.579454 AACTAAGAACTACTGCACGTCA 57.421 40.909 0.00 0.00 0.00 4.35
2564 3336 4.558080 GCTAACTAAGAACTACTGCACGTC 59.442 45.833 0.00 0.00 0.00 4.34
2566 3338 4.482386 TGCTAACTAAGAACTACTGCACG 58.518 43.478 0.00 0.00 0.00 5.34
2567 3339 6.969828 AATGCTAACTAAGAACTACTGCAC 57.030 37.500 0.00 0.00 0.00 4.57
2568 3340 8.311836 AGTAAATGCTAACTAAGAACTACTGCA 58.688 33.333 0.00 0.00 0.00 4.41
2569 3341 8.596380 CAGTAAATGCTAACTAAGAACTACTGC 58.404 37.037 0.00 0.00 29.79 4.40
2570 3342 9.856488 TCAGTAAATGCTAACTAAGAACTACTG 57.144 33.333 0.00 0.00 35.80 2.74
2582 3367 8.089115 AGAAACAGTCTTCAGTAAATGCTAAC 57.911 34.615 0.00 0.00 29.66 2.34
2589 3374 8.830580 CATGAGAAAGAAACAGTCTTCAGTAAA 58.169 33.333 0.00 0.00 46.36 2.01
2590 3375 7.987458 ACATGAGAAAGAAACAGTCTTCAGTAA 59.013 33.333 0.00 0.00 46.36 2.24
2686 3481 2.159043 ACAGAGCACCATATTGAGACCG 60.159 50.000 0.00 0.00 0.00 4.79
2727 3524 2.711547 GTTACTGAAGGGGGATGCCTAT 59.288 50.000 2.19 0.00 0.00 2.57
3007 3817 3.372060 GTGTAGCTTTGCCAAGTTTGTC 58.628 45.455 0.00 0.00 31.86 3.18
3034 3844 8.517878 CGAAATCCATATTCATAAGGCTTCATT 58.482 33.333 1.30 0.00 0.00 2.57
3368 4793 0.381801 CCCTACGGCATTGCAATGAC 59.618 55.000 37.36 34.60 41.13 3.06
3403 4828 9.547753 GATGCTACATTAGGAGACATTTTTAGA 57.452 33.333 0.00 0.00 0.00 2.10
3405 4830 8.271458 TGGATGCTACATTAGGAGACATTTTTA 58.729 33.333 0.00 0.00 0.00 1.52
3406 4831 7.067494 GTGGATGCTACATTAGGAGACATTTTT 59.933 37.037 0.00 0.00 0.00 1.94
3410 4835 4.655649 TGTGGATGCTACATTAGGAGACAT 59.344 41.667 0.00 0.00 0.00 3.06
3483 4908 4.192317 GCCAAGATCTAACGGACTTGATT 58.808 43.478 9.40 0.00 41.16 2.57
3516 4941 5.091910 GTCTTTTAACCAAAGGACGTGAG 57.908 43.478 0.00 0.00 39.86 3.51
3639 5066 6.859420 AATTTTGGTACATTGGTTTTCTGC 57.141 33.333 0.00 0.00 39.30 4.26
3652 5079 7.494298 ACCAACTGAAATGTCAAATTTTGGTAC 59.506 33.333 14.83 2.19 39.07 3.34
3696 5123 3.245990 GCACTGAGTTGCAAAATCCAAAC 59.754 43.478 0.00 0.00 40.84 2.93
3760 5187 7.877097 TGCGGGTATTACTAAAGTTTTTAGTGA 59.123 33.333 19.30 13.86 36.67 3.41
3769 5196 3.899052 TGCTGCGGGTATTACTAAAGT 57.101 42.857 0.00 0.00 0.00 2.66
3770 5197 4.035208 CCTTTGCTGCGGGTATTACTAAAG 59.965 45.833 0.00 0.00 0.00 1.85
3793 5220 2.904697 ATACTAGTGTAAAGCCCGCC 57.095 50.000 5.39 0.00 31.80 6.13
3824 5251 6.987992 CAGCCAAATTGTCAATAAAGGCATAT 59.012 34.615 25.43 11.58 43.13 1.78
4152 5581 3.476552 TGCTCCACCAACTTTAGTGAAG 58.523 45.455 0.00 0.00 41.32 3.02
4247 5676 5.180271 ACTTCAACAGGTTGTCGAGTAAAA 58.820 37.500 11.55 0.00 41.16 1.52
4582 6013 5.763204 ACTTCGTTCTTATTCTCTTTTGCCA 59.237 36.000 0.00 0.00 0.00 4.92
4601 6032 1.139095 GGTAGGCTCCGTCACTTCG 59.861 63.158 0.00 0.00 0.00 3.79
4709 6140 4.142093 GGCCAGGATAGTAACGTCTTGTAA 60.142 45.833 0.00 0.00 0.00 2.41
4719 6150 1.407656 CGGGCAGGCCAGGATAGTAA 61.408 60.000 14.59 0.00 37.98 2.24
4736 6167 4.202441 AGTTTGGATGGAATGATCTTCGG 58.798 43.478 0.00 0.00 0.00 4.30
4938 6369 1.823899 GAACCCCGCCATCATCCAC 60.824 63.158 0.00 0.00 0.00 4.02
4953 6384 4.274459 AGATCTGCATATTTTGGCGAGAAC 59.726 41.667 0.00 0.00 0.00 3.01
4961 6392 4.098960 AGCCCAACAGATCTGCATATTTTG 59.901 41.667 22.83 16.70 0.00 2.44
5008 6439 2.360475 GTGGAGGGACCTTGCAGC 60.360 66.667 0.00 0.00 39.86 5.25
5420 6854 0.590195 CACACCTTTGAGCAGAGTGC 59.410 55.000 0.00 0.00 45.46 4.40
5440 6874 2.153366 CAACACATGGAAAGCAACCC 57.847 50.000 0.00 0.00 0.00 4.11
5463 6897 3.012518 CAAACAATGCCCAAACAAACCA 58.987 40.909 0.00 0.00 0.00 3.67
5470 6904 2.702478 TCATGTCCAAACAATGCCCAAA 59.298 40.909 0.00 0.00 39.30 3.28
5518 6952 0.736325 ATCGCGTGAAGGCTACACAC 60.736 55.000 5.77 8.62 38.04 3.82
5529 6963 1.647346 GTTGGTGGAATATCGCGTGA 58.353 50.000 5.77 0.00 0.00 4.35
5784 7220 8.101419 GGATGTAGTTAAACAAGGGATATAGGG 58.899 40.741 0.00 0.00 32.02 3.53
5922 7358 2.027745 TCTTCCTTTCGAGAGCATTGCT 60.028 45.455 11.79 11.79 43.88 3.91
5945 7381 0.185901 AGAAAGCAAGCAGGGTTCCA 59.814 50.000 0.00 0.00 0.00 3.53
5969 7405 0.602060 CTCAGTCAGACTGCAGCAGA 59.398 55.000 29.70 6.43 45.54 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.