Multiple sequence alignment - TraesCS7B01G115700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G115700 chr7B 100.000 3975 0 0 1 3975 134308125 134304151 0.000000e+00 7341.0
1 TraesCS7B01G115700 chr7B 95.714 280 12 0 496 775 31801363 31801084 6.060000e-123 451.0
2 TraesCS7B01G115700 chr7B 79.223 515 63 26 1 478 743980714 743981221 6.410000e-83 318.0
3 TraesCS7B01G115700 chr7B 86.760 287 23 7 897 1179 134495848 134495573 4.990000e-79 305.0
4 TraesCS7B01G115700 chr7A 92.492 2131 124 13 897 3015 171283474 171281368 0.000000e+00 3016.0
5 TraesCS7B01G115700 chr7A 92.586 580 38 4 3400 3975 171274459 171273881 0.000000e+00 828.0
6 TraesCS7B01G115700 chr7A 95.181 166 8 0 3193 3358 171281288 171281123 3.050000e-66 263.0
7 TraesCS7B01G115700 chr7A 95.714 70 3 0 3044 3113 171281368 171281299 3.250000e-21 113.0
8 TraesCS7B01G115700 chr7D 91.224 980 68 8 1273 2250 168812822 168811859 0.000000e+00 1317.0
9 TraesCS7B01G115700 chr7D 89.659 967 99 1 2314 3280 169041815 169040850 0.000000e+00 1230.0
10 TraesCS7B01G115700 chr7D 88.859 368 26 6 897 1252 168813174 168812810 4.720000e-119 438.0
11 TraesCS7B01G115700 chr7D 89.796 245 25 0 3731 3975 168811858 168811614 8.290000e-82 315.0
12 TraesCS7B01G115700 chr7D 87.546 273 21 7 897 1165 169027661 169027398 1.790000e-78 303.0
13 TraesCS7B01G115700 chr7D 77.404 416 54 23 87 478 477136861 477136462 1.120000e-50 211.0
14 TraesCS7B01G115700 chr7D 79.268 164 28 5 319 478 19581328 19581489 4.200000e-20 110.0
15 TraesCS7B01G115700 chr1D 86.933 727 79 10 973 1698 2454044 2454755 0.000000e+00 802.0
16 TraesCS7B01G115700 chr1D 74.545 825 173 23 3147 3968 385053035 385052245 3.830000e-85 326.0
17 TraesCS7B01G115700 chr1D 75.817 612 109 19 3136 3745 298606745 298606171 1.410000e-69 274.0
18 TraesCS7B01G115700 chr3B 95.775 284 12 0 496 779 17350569 17350286 3.620000e-125 459.0
19 TraesCS7B01G115700 chr3B 78.346 508 50 32 1 478 147887130 147886653 1.410000e-69 274.0
20 TraesCS7B01G115700 chr3B 76.103 272 42 13 226 478 607483920 607484187 1.940000e-23 121.0
21 TraesCS7B01G115700 chr3B 78.344 157 30 4 326 478 580519453 580519609 9.090000e-17 99.0
22 TraesCS7B01G115700 chr4A 95.139 288 14 0 493 780 619765477 619765764 4.680000e-124 455.0
23 TraesCS7B01G115700 chr6B 95.730 281 12 0 500 780 664743936 664744216 1.680000e-123 453.0
24 TraesCS7B01G115700 chr6B 81.489 497 53 20 1 461 390032072 390032565 4.850000e-99 372.0
25 TraesCS7B01G115700 chr6B 79.936 314 35 15 182 478 157677698 157678000 5.210000e-49 206.0
26 TraesCS7B01G115700 chr6B 79.870 154 24 6 327 475 280045708 280045859 5.430000e-19 106.0
27 TraesCS7B01G115700 chr2B 95.122 287 13 1 496 782 774874341 774874626 6.060000e-123 451.0
28 TraesCS7B01G115700 chr2B 80.038 526 54 26 1 478 543607495 543606973 3.800000e-90 342.0
29 TraesCS7B01G115700 chr2B 79.429 525 56 21 2 478 58539537 58540057 1.380000e-84 324.0
30 TraesCS7B01G115700 chr2B 74.128 344 50 19 170 485 196198784 196199116 5.430000e-19 106.0
31 TraesCS7B01G115700 chr1A 95.105 286 14 0 496 781 41902262 41902547 6.060000e-123 451.0
32 TraesCS7B01G115700 chr2D 94.774 287 14 1 496 782 540821231 540821516 2.820000e-121 446.0
33 TraesCS7B01G115700 chr2D 79.042 167 29 5 326 488 52038856 52038692 4.200000e-20 110.0
34 TraesCS7B01G115700 chr3D 94.755 286 14 1 496 781 608457507 608457791 1.010000e-120 444.0
35 TraesCS7B01G115700 chr2A 95.000 280 14 0 496 775 68864112 68864391 1.310000e-119 440.0
36 TraesCS7B01G115700 chr2A 77.739 283 38 17 226 487 16815970 16816248 2.470000e-32 150.0
37 TraesCS7B01G115700 chr2A 93.478 46 3 0 3736 3781 47767385 47767430 7.130000e-08 69.4
38 TraesCS7B01G115700 chr1B 94.158 291 14 3 496 786 687415226 687414939 1.310000e-119 440.0
39 TraesCS7B01G115700 chr1B 75.334 823 163 21 3147 3968 517508027 517507244 3.780000e-95 359.0
40 TraesCS7B01G115700 chr1B 79.699 532 50 27 1 478 653977929 653977402 8.230000e-87 331.0
41 TraesCS7B01G115700 chr1B 79.183 514 58 23 15 484 643905236 643904728 1.070000e-80 311.0
42 TraesCS7B01G115700 chr1B 77.941 136 19 5 3136 3270 402047948 402047823 1.530000e-09 75.0
43 TraesCS7B01G115700 chr4B 81.467 518 53 11 1 478 124616148 124616662 6.230000e-103 385.0
44 TraesCS7B01G115700 chr4B 80.154 519 64 21 2 484 618085766 618085251 6.320000e-93 351.0
45 TraesCS7B01G115700 chr5B 81.935 465 42 17 1 426 527790735 527791196 4.890000e-94 355.0
46 TraesCS7B01G115700 chr5B 79.087 526 61 27 1 481 445550772 445550251 2.310000e-82 316.0
47 TraesCS7B01G115700 chr5B 78.450 529 60 31 1 481 592068892 592068370 3.000000e-76 296.0
48 TraesCS7B01G115700 chr5B 77.473 546 46 34 1 478 598145565 598146101 5.100000e-64 255.0
49 TraesCS7B01G115700 chrUn 80.392 510 53 15 12 478 53436362 53436867 1.060000e-90 344.0
50 TraesCS7B01G115700 chrUn 80.000 530 45 22 5 478 32284661 32285185 6.370000e-88 335.0
51 TraesCS7B01G115700 chr5D 79.177 413 32 24 12 377 205124905 205125310 1.850000e-58 237.0
52 TraesCS7B01G115700 chr5D 79.939 329 35 18 178 478 497877809 497877484 3.110000e-51 213.0
53 TraesCS7B01G115700 chr6D 80.925 173 25 7 311 478 111519552 111519721 3.220000e-26 130.0
54 TraesCS7B01G115700 chr4D 88.636 88 7 3 781 866 489339389 489339475 1.950000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G115700 chr7B 134304151 134308125 3974 True 7341.000000 7341 100.000000 1 3975 1 chr7B.!!$R2 3974
1 TraesCS7B01G115700 chr7B 743980714 743981221 507 False 318.000000 318 79.223000 1 478 1 chr7B.!!$F1 477
2 TraesCS7B01G115700 chr7A 171281123 171283474 2351 True 1130.666667 3016 94.462333 897 3358 3 chr7A.!!$R2 2461
3 TraesCS7B01G115700 chr7A 171273881 171274459 578 True 828.000000 828 92.586000 3400 3975 1 chr7A.!!$R1 575
4 TraesCS7B01G115700 chr7D 169040850 169041815 965 True 1230.000000 1230 89.659000 2314 3280 1 chr7D.!!$R2 966
5 TraesCS7B01G115700 chr7D 168811614 168813174 1560 True 690.000000 1317 89.959667 897 3975 3 chr7D.!!$R4 3078
6 TraesCS7B01G115700 chr1D 2454044 2454755 711 False 802.000000 802 86.933000 973 1698 1 chr1D.!!$F1 725
7 TraesCS7B01G115700 chr1D 385052245 385053035 790 True 326.000000 326 74.545000 3147 3968 1 chr1D.!!$R2 821
8 TraesCS7B01G115700 chr1D 298606171 298606745 574 True 274.000000 274 75.817000 3136 3745 1 chr1D.!!$R1 609
9 TraesCS7B01G115700 chr2B 543606973 543607495 522 True 342.000000 342 80.038000 1 478 1 chr2B.!!$R1 477
10 TraesCS7B01G115700 chr2B 58539537 58540057 520 False 324.000000 324 79.429000 2 478 1 chr2B.!!$F1 476
11 TraesCS7B01G115700 chr1B 517507244 517508027 783 True 359.000000 359 75.334000 3147 3968 1 chr1B.!!$R2 821
12 TraesCS7B01G115700 chr1B 653977402 653977929 527 True 331.000000 331 79.699000 1 478 1 chr1B.!!$R4 477
13 TraesCS7B01G115700 chr1B 643904728 643905236 508 True 311.000000 311 79.183000 15 484 1 chr1B.!!$R3 469
14 TraesCS7B01G115700 chr4B 124616148 124616662 514 False 385.000000 385 81.467000 1 478 1 chr4B.!!$F1 477
15 TraesCS7B01G115700 chr4B 618085251 618085766 515 True 351.000000 351 80.154000 2 484 1 chr4B.!!$R1 482
16 TraesCS7B01G115700 chr5B 445550251 445550772 521 True 316.000000 316 79.087000 1 481 1 chr5B.!!$R1 480
17 TraesCS7B01G115700 chr5B 592068370 592068892 522 True 296.000000 296 78.450000 1 481 1 chr5B.!!$R2 480
18 TraesCS7B01G115700 chr5B 598145565 598146101 536 False 255.000000 255 77.473000 1 478 1 chr5B.!!$F2 477
19 TraesCS7B01G115700 chrUn 53436362 53436867 505 False 344.000000 344 80.392000 12 478 1 chrUn.!!$F2 466
20 TraesCS7B01G115700 chrUn 32284661 32285185 524 False 335.000000 335 80.000000 5 478 1 chrUn.!!$F1 473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
906 1010 0.103937 GCTCCACCTTCTCTGGATCG 59.896 60.0 0.00 0.00 37.18 3.69 F
1046 1160 0.747283 GAAGACCAGGCATCTGCTGG 60.747 60.0 14.93 14.93 41.71 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2663 2821 0.312416 GCCTCGATGTAGCTCGTGAT 59.688 55.0 0.0 0.0 39.62 3.06 R
3033 3191 0.322546 AATCGAACACCCAAGAGGCC 60.323 55.0 0.0 0.0 40.58 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 113 1.409101 GGGAGTGGGCGCCTTTTATAA 60.409 52.381 28.56 0.22 34.78 0.98
104 120 2.097036 GGCGCCTTTTATAACCCAAGT 58.903 47.619 22.15 0.00 0.00 3.16
233 306 3.583380 AGCCTTGGCCAGCCTTGA 61.583 61.111 13.08 0.00 36.94 3.02
377 475 1.894756 CGAACTTCGGCCCAAACCA 60.895 57.895 3.06 0.00 36.00 3.67
378 476 1.448922 CGAACTTCGGCCCAAACCAA 61.449 55.000 3.06 0.00 36.00 3.67
408 507 2.406452 CTTTTGTGGGCACGACTGGC 62.406 60.000 0.00 0.00 42.39 4.85
410 509 4.624364 TGTGGGCACGACTGGCTG 62.624 66.667 0.00 0.00 42.72 4.85
450 553 0.698818 AAAATCGACTTGGAGGGCCT 59.301 50.000 5.25 5.25 34.31 5.19
478 582 1.880340 CGCGGTTGGAGATGCTCTC 60.880 63.158 0.00 5.01 42.66 3.20
484 588 2.497675 GGTTGGAGATGCTCTCAGTACA 59.502 50.000 13.06 2.28 45.12 2.90
485 589 3.516615 GTTGGAGATGCTCTCAGTACAC 58.483 50.000 13.06 1.89 45.12 2.90
486 590 2.807676 TGGAGATGCTCTCAGTACACA 58.192 47.619 13.06 1.46 45.12 3.72
487 591 2.757314 TGGAGATGCTCTCAGTACACAG 59.243 50.000 13.06 0.00 45.12 3.66
488 592 2.757868 GGAGATGCTCTCAGTACACAGT 59.242 50.000 13.06 0.00 45.12 3.55
489 593 3.194542 GGAGATGCTCTCAGTACACAGTT 59.805 47.826 13.06 0.00 45.12 3.16
490 594 4.420168 GAGATGCTCTCAGTACACAGTTC 58.580 47.826 0.00 0.00 42.90 3.01
491 595 3.829026 AGATGCTCTCAGTACACAGTTCA 59.171 43.478 0.00 0.00 0.00 3.18
492 596 3.650070 TGCTCTCAGTACACAGTTCAG 57.350 47.619 0.00 0.00 0.00 3.02
493 597 3.222603 TGCTCTCAGTACACAGTTCAGA 58.777 45.455 0.00 0.00 0.00 3.27
494 598 3.636764 TGCTCTCAGTACACAGTTCAGAA 59.363 43.478 0.00 0.00 0.00 3.02
495 599 4.233789 GCTCTCAGTACACAGTTCAGAAG 58.766 47.826 0.00 0.00 0.00 2.85
496 600 4.233789 CTCTCAGTACACAGTTCAGAAGC 58.766 47.826 0.00 0.00 0.00 3.86
497 601 3.005897 TCTCAGTACACAGTTCAGAAGCC 59.994 47.826 0.00 0.00 0.00 4.35
498 602 2.037251 TCAGTACACAGTTCAGAAGCCC 59.963 50.000 0.00 0.00 0.00 5.19
499 603 2.037772 CAGTACACAGTTCAGAAGCCCT 59.962 50.000 0.00 0.00 0.00 5.19
500 604 2.037772 AGTACACAGTTCAGAAGCCCTG 59.962 50.000 0.00 0.00 44.27 4.45
501 605 0.839946 ACACAGTTCAGAAGCCCTGT 59.160 50.000 0.08 0.08 43.38 4.00
502 606 1.212935 ACACAGTTCAGAAGCCCTGTT 59.787 47.619 2.79 0.00 43.38 3.16
503 607 2.301346 CACAGTTCAGAAGCCCTGTTT 58.699 47.619 2.79 0.00 43.38 2.83
504 608 2.033801 CACAGTTCAGAAGCCCTGTTTG 59.966 50.000 2.79 4.35 43.38 2.93
505 609 1.610522 CAGTTCAGAAGCCCTGTTTGG 59.389 52.381 3.97 0.00 43.38 3.28
506 610 1.215423 AGTTCAGAAGCCCTGTTTGGT 59.785 47.619 3.97 0.00 43.38 3.67
507 611 2.031870 GTTCAGAAGCCCTGTTTGGTT 58.968 47.619 3.97 0.00 43.38 3.67
508 612 1.981256 TCAGAAGCCCTGTTTGGTTC 58.019 50.000 3.97 0.00 43.38 3.62
509 613 1.214175 TCAGAAGCCCTGTTTGGTTCA 59.786 47.619 5.19 0.00 43.38 3.18
510 614 2.158475 TCAGAAGCCCTGTTTGGTTCAT 60.158 45.455 5.19 0.00 43.38 2.57
511 615 3.073798 TCAGAAGCCCTGTTTGGTTCATA 59.926 43.478 5.19 0.00 43.38 2.15
512 616 3.826157 CAGAAGCCCTGTTTGGTTCATAA 59.174 43.478 5.19 0.00 41.46 1.90
513 617 4.082125 AGAAGCCCTGTTTGGTTCATAAG 58.918 43.478 5.19 0.00 41.46 1.73
514 618 3.525800 AGCCCTGTTTGGTTCATAAGT 57.474 42.857 0.00 0.00 0.00 2.24
515 619 3.421844 AGCCCTGTTTGGTTCATAAGTC 58.578 45.455 0.00 0.00 0.00 3.01
516 620 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
517 621 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
518 622 4.566907 GCCCTGTTTGGTTCATAAGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
519 623 5.186198 CCCTGTTTGGTTCATAAGTCCTAG 58.814 45.833 0.00 0.00 0.00 3.02
520 624 5.186198 CCTGTTTGGTTCATAAGTCCTAGG 58.814 45.833 0.82 0.82 0.00 3.02
521 625 5.045869 CCTGTTTGGTTCATAAGTCCTAGGA 60.046 44.000 7.62 7.62 0.00 2.94
522 626 5.801380 TGTTTGGTTCATAAGTCCTAGGAC 58.199 41.667 31.29 31.29 44.86 3.85
550 654 6.956102 TTTAGTCCCAACTTATAAGTCCCA 57.044 37.500 18.28 1.06 38.57 4.37
551 655 6.956102 TTAGTCCCAACTTATAAGTCCCAA 57.044 37.500 18.28 3.05 38.57 4.12
552 656 5.437191 AGTCCCAACTTATAAGTCCCAAG 57.563 43.478 18.28 6.66 38.57 3.61
553 657 4.850386 AGTCCCAACTTATAAGTCCCAAGT 59.150 41.667 18.28 5.74 38.57 3.16
554 658 5.045797 AGTCCCAACTTATAAGTCCCAAGTC 60.046 44.000 18.28 6.78 38.57 3.01
555 659 4.226620 TCCCAACTTATAAGTCCCAAGTCC 59.773 45.833 18.28 0.00 38.57 3.85
556 660 4.227527 CCCAACTTATAAGTCCCAAGTCCT 59.772 45.833 18.28 0.00 38.57 3.85
557 661 5.281037 CCCAACTTATAAGTCCCAAGTCCTT 60.281 44.000 18.28 0.00 38.57 3.36
558 662 6.069847 CCCAACTTATAAGTCCCAAGTCCTTA 60.070 42.308 18.28 0.00 38.57 2.69
559 663 7.399634 CCAACTTATAAGTCCCAAGTCCTTAA 58.600 38.462 18.28 0.00 38.57 1.85
560 664 7.886446 CCAACTTATAAGTCCCAAGTCCTTAAA 59.114 37.037 18.28 0.00 38.57 1.52
561 665 9.292195 CAACTTATAAGTCCCAAGTCCTTAAAA 57.708 33.333 18.28 0.00 38.57 1.52
562 666 9.871175 AACTTATAAGTCCCAAGTCCTTAAAAA 57.129 29.630 18.28 0.00 38.57 1.94
563 667 9.516546 ACTTATAAGTCCCAAGTCCTTAAAAAG 57.483 33.333 12.50 0.00 32.86 2.27
564 668 9.516546 CTTATAAGTCCCAAGTCCTTAAAAAGT 57.483 33.333 4.18 0.00 0.00 2.66
566 670 8.859236 ATAAGTCCCAAGTCCTTAAAAAGTAC 57.141 34.615 0.00 0.00 0.00 2.73
567 671 5.628130 AGTCCCAAGTCCTTAAAAAGTACC 58.372 41.667 0.00 0.00 0.00 3.34
568 672 5.371769 AGTCCCAAGTCCTTAAAAAGTACCT 59.628 40.000 0.00 0.00 0.00 3.08
569 673 6.559921 AGTCCCAAGTCCTTAAAAAGTACCTA 59.440 38.462 0.00 0.00 0.00 3.08
570 674 6.652481 GTCCCAAGTCCTTAAAAAGTACCTAC 59.348 42.308 0.00 0.00 0.00 3.18
571 675 5.942236 CCCAAGTCCTTAAAAAGTACCTACC 59.058 44.000 0.00 0.00 0.00 3.18
572 676 6.240089 CCCAAGTCCTTAAAAAGTACCTACCT 60.240 42.308 0.00 0.00 0.00 3.08
573 677 6.653740 CCAAGTCCTTAAAAAGTACCTACCTG 59.346 42.308 0.00 0.00 0.00 4.00
574 678 7.222161 CAAGTCCTTAAAAAGTACCTACCTGT 58.778 38.462 0.00 0.00 0.00 4.00
575 679 7.384524 AGTCCTTAAAAAGTACCTACCTGTT 57.615 36.000 0.00 0.00 0.00 3.16
576 680 7.809238 AGTCCTTAAAAAGTACCTACCTGTTT 58.191 34.615 0.00 0.00 0.00 2.83
577 681 7.718314 AGTCCTTAAAAAGTACCTACCTGTTTG 59.282 37.037 0.00 0.00 0.00 2.93
578 682 6.999871 TCCTTAAAAAGTACCTACCTGTTTGG 59.000 38.462 0.00 0.00 42.93 3.28
588 692 3.036431 CCTGTTTGGTTCCTGGGAC 57.964 57.895 0.00 0.00 0.00 4.46
589 693 0.478507 CCTGTTTGGTTCCTGGGACT 59.521 55.000 4.84 0.00 0.00 3.85
590 694 1.133482 CCTGTTTGGTTCCTGGGACTT 60.133 52.381 4.84 0.00 0.00 3.01
591 695 2.107552 CCTGTTTGGTTCCTGGGACTTA 59.892 50.000 4.84 0.00 0.00 2.24
592 696 3.245264 CCTGTTTGGTTCCTGGGACTTAT 60.245 47.826 4.84 0.00 0.00 1.73
593 697 4.018779 CCTGTTTGGTTCCTGGGACTTATA 60.019 45.833 4.84 0.00 0.00 0.98
594 698 5.515886 CCTGTTTGGTTCCTGGGACTTATAA 60.516 44.000 4.84 0.00 0.00 0.98
595 699 5.566469 TGTTTGGTTCCTGGGACTTATAAG 58.434 41.667 11.05 11.05 0.00 1.73
596 700 5.073965 TGTTTGGTTCCTGGGACTTATAAGT 59.926 40.000 18.05 18.05 43.16 2.24
619 723 9.448587 AAGTCCCTATAAGACCATATTACAACT 57.551 33.333 0.09 0.00 34.67 3.16
629 733 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
638 742 7.852550 ACAACTATAAGTCCCTATAAGTCCC 57.147 40.000 0.00 0.00 0.00 4.46
639 743 7.602868 ACAACTATAAGTCCCTATAAGTCCCT 58.397 38.462 0.00 0.00 0.00 4.20
640 744 7.729431 ACAACTATAAGTCCCTATAAGTCCCTC 59.271 40.741 0.00 0.00 0.00 4.30
641 745 6.803017 ACTATAAGTCCCTATAAGTCCCTCC 58.197 44.000 0.00 0.00 0.00 4.30
642 746 5.970692 ATAAGTCCCTATAAGTCCCTCCT 57.029 43.478 0.00 0.00 0.00 3.69
643 747 4.645968 AAGTCCCTATAAGTCCCTCCTT 57.354 45.455 0.00 0.00 0.00 3.36
644 748 5.763239 AAGTCCCTATAAGTCCCTCCTTA 57.237 43.478 0.00 0.00 0.00 2.69
645 749 5.763239 AGTCCCTATAAGTCCCTCCTTAA 57.237 43.478 0.00 0.00 31.09 1.85
646 750 5.718039 AGTCCCTATAAGTCCCTCCTTAAG 58.282 45.833 0.00 0.00 31.09 1.85
647 751 5.439059 AGTCCCTATAAGTCCCTCCTTAAGA 59.561 44.000 3.36 0.00 31.09 2.10
648 752 5.776208 GTCCCTATAAGTCCCTCCTTAAGAG 59.224 48.000 3.36 0.00 42.83 2.85
649 753 5.439059 TCCCTATAAGTCCCTCCTTAAGAGT 59.561 44.000 3.36 0.00 41.47 3.24
650 754 5.776208 CCCTATAAGTCCCTCCTTAAGAGTC 59.224 48.000 3.36 0.00 41.47 3.36
651 755 6.412259 CCCTATAAGTCCCTCCTTAAGAGTCT 60.412 46.154 3.36 0.00 41.47 3.24
652 756 7.070629 CCTATAAGTCCCTCCTTAAGAGTCTT 58.929 42.308 10.87 10.87 41.47 3.01
653 757 8.226112 CCTATAAGTCCCTCCTTAAGAGTCTTA 58.774 40.741 8.59 8.59 41.47 2.10
654 758 9.816787 CTATAAGTCCCTCCTTAAGAGTCTTAT 57.183 37.037 13.34 10.38 41.47 1.73
656 760 7.816300 AAGTCCCTCCTTAAGAGTCTTATTT 57.184 36.000 13.34 0.00 41.47 1.40
657 761 7.426606 AGTCCCTCCTTAAGAGTCTTATTTC 57.573 40.000 13.34 0.47 41.47 2.17
658 762 6.960542 AGTCCCTCCTTAAGAGTCTTATTTCA 59.039 38.462 13.34 0.00 41.47 2.69
659 763 7.625682 AGTCCCTCCTTAAGAGTCTTATTTCAT 59.374 37.037 13.34 0.00 41.47 2.57
660 764 8.925338 GTCCCTCCTTAAGAGTCTTATTTCATA 58.075 37.037 13.34 0.00 41.47 2.15
661 765 9.502035 TCCCTCCTTAAGAGTCTTATTTCATAA 57.498 33.333 13.34 0.00 41.47 1.90
662 766 9.771534 CCCTCCTTAAGAGTCTTATTTCATAAG 57.228 37.037 13.34 7.71 41.47 1.73
666 770 9.549078 CCTTAAGAGTCTTATTTCATAAGTCCC 57.451 37.037 13.34 0.00 42.21 4.46
670 774 9.981460 AAGAGTCTTATTTCATAAGTCCCAAAT 57.019 29.630 2.75 0.00 42.21 2.32
671 775 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
672 776 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
673 777 7.836183 AGTCTTATTTCATAAGTCCCAAATGCT 59.164 33.333 3.93 0.00 42.21 3.79
674 778 8.131731 GTCTTATTTCATAAGTCCCAAATGCTC 58.868 37.037 3.93 0.00 42.21 4.26
675 779 7.833682 TCTTATTTCATAAGTCCCAAATGCTCA 59.166 33.333 3.93 0.00 42.21 4.26
676 780 5.643379 TTTCATAAGTCCCAAATGCTCAC 57.357 39.130 0.00 0.00 0.00 3.51
677 781 4.574674 TCATAAGTCCCAAATGCTCACT 57.425 40.909 0.00 0.00 0.00 3.41
678 782 4.922206 TCATAAGTCCCAAATGCTCACTT 58.078 39.130 0.00 0.00 0.00 3.16
679 783 5.324409 TCATAAGTCCCAAATGCTCACTTT 58.676 37.500 0.00 0.00 0.00 2.66
680 784 6.480763 TCATAAGTCCCAAATGCTCACTTTA 58.519 36.000 0.00 0.00 0.00 1.85
681 785 6.945435 TCATAAGTCCCAAATGCTCACTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
682 786 5.712152 AAGTCCCAAATGCTCACTTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
683 787 4.729868 AGTCCCAAATGCTCACTTTAAGT 58.270 39.130 0.00 0.00 0.00 2.24
684 788 4.762251 AGTCCCAAATGCTCACTTTAAGTC 59.238 41.667 0.00 0.00 0.00 3.01
685 789 4.079253 TCCCAAATGCTCACTTTAAGTCC 58.921 43.478 0.00 0.00 0.00 3.85
686 790 3.193479 CCCAAATGCTCACTTTAAGTCCC 59.807 47.826 0.00 0.00 0.00 4.46
687 791 4.082125 CCAAATGCTCACTTTAAGTCCCT 58.918 43.478 0.00 0.00 0.00 4.20
688 792 5.253330 CCAAATGCTCACTTTAAGTCCCTA 58.747 41.667 0.00 0.00 0.00 3.53
689 793 5.123979 CCAAATGCTCACTTTAAGTCCCTAC 59.876 44.000 0.00 0.00 0.00 3.18
690 794 5.499004 AATGCTCACTTTAAGTCCCTACA 57.501 39.130 0.00 0.00 0.00 2.74
691 795 4.967084 TGCTCACTTTAAGTCCCTACAA 57.033 40.909 0.00 0.00 0.00 2.41
692 796 4.894784 TGCTCACTTTAAGTCCCTACAAG 58.105 43.478 0.00 0.00 0.00 3.16
693 797 4.347000 TGCTCACTTTAAGTCCCTACAAGT 59.653 41.667 0.00 0.00 0.00 3.16
694 798 4.930405 GCTCACTTTAAGTCCCTACAAGTC 59.070 45.833 0.00 0.00 0.00 3.01
695 799 5.479124 TCACTTTAAGTCCCTACAAGTCC 57.521 43.478 0.00 0.00 0.00 3.85
696 800 4.285260 TCACTTTAAGTCCCTACAAGTCCC 59.715 45.833 0.00 0.00 0.00 4.46
697 801 4.286291 CACTTTAAGTCCCTACAAGTCCCT 59.714 45.833 0.00 0.00 0.00 4.20
698 802 4.531339 ACTTTAAGTCCCTACAAGTCCCTC 59.469 45.833 0.00 0.00 0.00 4.30
699 803 1.954035 AAGTCCCTACAAGTCCCTCC 58.046 55.000 0.00 0.00 0.00 4.30
700 804 1.094269 AGTCCCTACAAGTCCCTCCT 58.906 55.000 0.00 0.00 0.00 3.69
701 805 1.196012 GTCCCTACAAGTCCCTCCTG 58.804 60.000 0.00 0.00 0.00 3.86
702 806 0.790993 TCCCTACAAGTCCCTCCTGT 59.209 55.000 0.00 0.00 0.00 4.00
703 807 1.151413 TCCCTACAAGTCCCTCCTGTT 59.849 52.381 0.00 0.00 0.00 3.16
704 808 1.985895 CCCTACAAGTCCCTCCTGTTT 59.014 52.381 0.00 0.00 0.00 2.83
705 809 2.290323 CCCTACAAGTCCCTCCTGTTTG 60.290 54.545 0.00 0.00 0.00 2.93
706 810 2.290323 CCTACAAGTCCCTCCTGTTTGG 60.290 54.545 0.00 0.00 37.10 3.28
707 811 1.222567 ACAAGTCCCTCCTGTTTGGT 58.777 50.000 0.00 0.00 37.07 3.67
708 812 1.569072 ACAAGTCCCTCCTGTTTGGTT 59.431 47.619 0.00 0.00 37.07 3.67
709 813 2.024369 ACAAGTCCCTCCTGTTTGGTTT 60.024 45.455 0.00 0.00 37.07 3.27
710 814 2.362077 CAAGTCCCTCCTGTTTGGTTTG 59.638 50.000 0.00 0.00 37.07 2.93
711 815 1.133482 AGTCCCTCCTGTTTGGTTTGG 60.133 52.381 0.00 0.00 37.07 3.28
712 816 1.133606 GTCCCTCCTGTTTGGTTTGGA 60.134 52.381 0.00 0.00 37.07 3.53
713 817 1.786441 TCCCTCCTGTTTGGTTTGGAT 59.214 47.619 0.00 0.00 37.07 3.41
714 818 1.895131 CCCTCCTGTTTGGTTTGGATG 59.105 52.381 0.00 0.00 37.07 3.51
715 819 1.895131 CCTCCTGTTTGGTTTGGATGG 59.105 52.381 0.00 0.00 37.07 3.51
716 820 1.895131 CTCCTGTTTGGTTTGGATGGG 59.105 52.381 0.00 0.00 37.07 4.00
717 821 1.501170 TCCTGTTTGGTTTGGATGGGA 59.499 47.619 0.00 0.00 37.07 4.37
718 822 1.618343 CCTGTTTGGTTTGGATGGGAC 59.382 52.381 0.00 0.00 0.00 4.46
719 823 1.618343 CTGTTTGGTTTGGATGGGACC 59.382 52.381 0.00 0.00 0.00 4.46
720 824 1.219213 TGTTTGGTTTGGATGGGACCT 59.781 47.619 0.00 0.00 34.52 3.85
721 825 2.447429 TGTTTGGTTTGGATGGGACCTA 59.553 45.455 0.00 0.00 34.52 3.08
722 826 3.076785 TGTTTGGTTTGGATGGGACCTAT 59.923 43.478 0.00 0.00 34.52 2.57
723 827 4.292571 TGTTTGGTTTGGATGGGACCTATA 59.707 41.667 0.00 0.00 34.52 1.31
724 828 4.788925 TTGGTTTGGATGGGACCTATAG 57.211 45.455 0.00 0.00 34.52 1.31
725 829 4.015617 TGGTTTGGATGGGACCTATAGA 57.984 45.455 0.00 0.00 34.52 1.98
726 830 3.973973 TGGTTTGGATGGGACCTATAGAG 59.026 47.826 0.00 0.00 34.52 2.43
727 831 4.232091 GGTTTGGATGGGACCTATAGAGA 58.768 47.826 0.00 0.00 0.00 3.10
728 832 4.040584 GGTTTGGATGGGACCTATAGAGAC 59.959 50.000 0.00 0.00 0.00 3.36
729 833 4.552883 TTGGATGGGACCTATAGAGACA 57.447 45.455 0.00 0.00 0.00 3.41
730 834 4.767000 TGGATGGGACCTATAGAGACAT 57.233 45.455 0.00 0.40 0.00 3.06
731 835 5.093236 TGGATGGGACCTATAGAGACATT 57.907 43.478 0.00 0.00 0.00 2.71
732 836 5.476983 TGGATGGGACCTATAGAGACATTT 58.523 41.667 0.00 0.00 0.00 2.32
733 837 5.911178 TGGATGGGACCTATAGAGACATTTT 59.089 40.000 0.00 0.00 0.00 1.82
734 838 6.389869 TGGATGGGACCTATAGAGACATTTTT 59.610 38.462 0.00 0.00 0.00 1.94
735 839 7.570982 TGGATGGGACCTATAGAGACATTTTTA 59.429 37.037 0.00 0.00 0.00 1.52
736 840 8.437575 GGATGGGACCTATAGAGACATTTTTAA 58.562 37.037 0.00 0.00 0.00 1.52
737 841 9.495572 GATGGGACCTATAGAGACATTTTTAAG 57.504 37.037 0.00 0.00 0.00 1.85
738 842 8.388656 TGGGACCTATAGAGACATTTTTAAGT 57.611 34.615 0.00 0.00 0.00 2.24
739 843 8.483758 TGGGACCTATAGAGACATTTTTAAGTC 58.516 37.037 0.00 0.00 35.02 3.01
740 844 7.932491 GGGACCTATAGAGACATTTTTAAGTCC 59.068 40.741 0.00 4.57 37.42 3.85
741 845 7.932491 GGACCTATAGAGACATTTTTAAGTCCC 59.068 40.741 0.00 0.00 35.38 4.46
742 846 8.625467 ACCTATAGAGACATTTTTAAGTCCCT 57.375 34.615 0.00 0.00 35.38 4.20
743 847 9.725206 ACCTATAGAGACATTTTTAAGTCCCTA 57.275 33.333 0.00 0.00 35.38 3.53
746 850 8.966069 ATAGAGACATTTTTAAGTCCCTAAGC 57.034 34.615 0.00 0.00 35.38 3.09
747 851 6.181190 AGAGACATTTTTAAGTCCCTAAGCC 58.819 40.000 0.00 0.00 35.38 4.35
748 852 5.887754 AGACATTTTTAAGTCCCTAAGCCA 58.112 37.500 0.00 0.00 35.38 4.75
749 853 6.311735 AGACATTTTTAAGTCCCTAAGCCAA 58.688 36.000 0.00 0.00 35.38 4.52
750 854 6.954102 AGACATTTTTAAGTCCCTAAGCCAAT 59.046 34.615 0.00 0.00 35.38 3.16
751 855 8.113462 AGACATTTTTAAGTCCCTAAGCCAATA 58.887 33.333 0.00 0.00 35.38 1.90
752 856 8.658840 ACATTTTTAAGTCCCTAAGCCAATAA 57.341 30.769 0.00 0.00 0.00 1.40
753 857 8.749354 ACATTTTTAAGTCCCTAAGCCAATAAG 58.251 33.333 0.00 0.00 0.00 1.73
754 858 8.749354 CATTTTTAAGTCCCTAAGCCAATAAGT 58.251 33.333 0.00 0.00 0.00 2.24
755 859 7.933215 TTTTAAGTCCCTAAGCCAATAAGTC 57.067 36.000 0.00 0.00 0.00 3.01
756 860 4.505324 AAGTCCCTAAGCCAATAAGTCC 57.495 45.455 0.00 0.00 0.00 3.85
757 861 2.778270 AGTCCCTAAGCCAATAAGTCCC 59.222 50.000 0.00 0.00 0.00 4.46
758 862 2.778270 GTCCCTAAGCCAATAAGTCCCT 59.222 50.000 0.00 0.00 0.00 4.20
759 863 2.777692 TCCCTAAGCCAATAAGTCCCTG 59.222 50.000 0.00 0.00 0.00 4.45
760 864 2.158608 CCCTAAGCCAATAAGTCCCTGG 60.159 54.545 0.00 0.00 0.00 4.45
761 865 2.777692 CCTAAGCCAATAAGTCCCTGGA 59.222 50.000 0.00 0.00 31.38 3.86
762 866 3.202151 CCTAAGCCAATAAGTCCCTGGAA 59.798 47.826 0.00 0.00 31.38 3.53
763 867 3.825908 AAGCCAATAAGTCCCTGGAAA 57.174 42.857 0.00 0.00 31.38 3.13
764 868 3.087370 AGCCAATAAGTCCCTGGAAAC 57.913 47.619 0.00 0.00 31.38 2.78
765 869 2.378547 AGCCAATAAGTCCCTGGAAACA 59.621 45.455 0.00 0.00 39.59 2.83
766 870 3.161866 GCCAATAAGTCCCTGGAAACAA 58.838 45.455 0.00 0.00 42.06 2.83
767 871 3.576550 GCCAATAAGTCCCTGGAAACAAA 59.423 43.478 0.00 0.00 42.06 2.83
768 872 4.560716 GCCAATAAGTCCCTGGAAACAAAC 60.561 45.833 0.00 0.00 42.06 2.93
769 873 4.586841 CCAATAAGTCCCTGGAAACAAACA 59.413 41.667 0.00 0.00 42.06 2.83
770 874 5.508994 CCAATAAGTCCCTGGAAACAAACAC 60.509 44.000 0.00 0.00 42.06 3.32
771 875 2.067365 AGTCCCTGGAAACAAACACC 57.933 50.000 0.00 0.00 42.06 4.16
772 876 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
773 877 0.930726 TCCCTGGAAACAAACACCCT 59.069 50.000 0.00 0.00 42.06 4.34
774 878 1.133606 TCCCTGGAAACAAACACCCTC 60.134 52.381 0.00 0.00 42.06 4.30
775 879 1.328279 CCTGGAAACAAACACCCTCC 58.672 55.000 0.00 0.00 42.06 4.30
776 880 1.133482 CCTGGAAACAAACACCCTCCT 60.133 52.381 0.00 0.00 42.06 3.69
777 881 2.107552 CCTGGAAACAAACACCCTCCTA 59.892 50.000 0.00 0.00 42.06 2.94
778 882 3.412386 CTGGAAACAAACACCCTCCTAG 58.588 50.000 0.00 0.00 42.06 3.02
779 883 2.781174 TGGAAACAAACACCCTCCTAGT 59.219 45.455 0.00 0.00 37.44 2.57
780 884 3.181448 TGGAAACAAACACCCTCCTAGTC 60.181 47.826 0.00 0.00 37.44 2.59
781 885 3.072622 GGAAACAAACACCCTCCTAGTCT 59.927 47.826 0.00 0.00 0.00 3.24
782 886 4.285260 GGAAACAAACACCCTCCTAGTCTA 59.715 45.833 0.00 0.00 0.00 2.59
783 887 5.045797 GGAAACAAACACCCTCCTAGTCTAT 60.046 44.000 0.00 0.00 0.00 1.98
784 888 6.449830 AAACAAACACCCTCCTAGTCTATT 57.550 37.500 0.00 0.00 0.00 1.73
785 889 6.449830 AACAAACACCCTCCTAGTCTATTT 57.550 37.500 0.00 0.00 0.00 1.40
786 890 6.449830 ACAAACACCCTCCTAGTCTATTTT 57.550 37.500 0.00 0.00 0.00 1.82
787 891 6.849151 ACAAACACCCTCCTAGTCTATTTTT 58.151 36.000 0.00 0.00 0.00 1.94
788 892 6.940867 ACAAACACCCTCCTAGTCTATTTTTC 59.059 38.462 0.00 0.00 0.00 2.29
789 893 6.954352 AACACCCTCCTAGTCTATTTTTCT 57.046 37.500 0.00 0.00 0.00 2.52
790 894 6.301169 ACACCCTCCTAGTCTATTTTTCTG 57.699 41.667 0.00 0.00 0.00 3.02
791 895 5.785940 ACACCCTCCTAGTCTATTTTTCTGT 59.214 40.000 0.00 0.00 0.00 3.41
792 896 6.109359 CACCCTCCTAGTCTATTTTTCTGTG 58.891 44.000 0.00 0.00 0.00 3.66
793 897 5.189934 ACCCTCCTAGTCTATTTTTCTGTGG 59.810 44.000 0.00 0.00 0.00 4.17
794 898 5.119694 CCTCCTAGTCTATTTTTCTGTGGC 58.880 45.833 0.00 0.00 0.00 5.01
795 899 5.104735 CCTCCTAGTCTATTTTTCTGTGGCT 60.105 44.000 0.00 0.00 0.00 4.75
796 900 5.734720 TCCTAGTCTATTTTTCTGTGGCTG 58.265 41.667 0.00 0.00 0.00 4.85
797 901 4.333926 CCTAGTCTATTTTTCTGTGGCTGC 59.666 45.833 0.00 0.00 0.00 5.25
798 902 2.744202 AGTCTATTTTTCTGTGGCTGCG 59.256 45.455 0.00 0.00 0.00 5.18
799 903 1.468520 TCTATTTTTCTGTGGCTGCGC 59.531 47.619 0.00 0.00 0.00 6.09
800 904 1.199789 CTATTTTTCTGTGGCTGCGCA 59.800 47.619 10.98 10.98 0.00 6.09
801 905 0.604578 ATTTTTCTGTGGCTGCGCAT 59.395 45.000 12.24 0.00 0.00 4.73
802 906 0.318869 TTTTTCTGTGGCTGCGCATG 60.319 50.000 12.24 6.51 0.00 4.06
803 907 1.454572 TTTTCTGTGGCTGCGCATGT 61.455 50.000 12.24 0.00 0.00 3.21
804 908 1.454572 TTTCTGTGGCTGCGCATGTT 61.455 50.000 12.24 0.00 0.00 2.71
805 909 1.855213 TTCTGTGGCTGCGCATGTTC 61.855 55.000 12.24 3.00 0.00 3.18
806 910 2.594013 TGTGGCTGCGCATGTTCA 60.594 55.556 12.24 5.94 0.00 3.18
807 911 2.126734 GTGGCTGCGCATGTTCAC 60.127 61.111 12.24 13.24 0.00 3.18
808 912 2.594013 TGGCTGCGCATGTTCACA 60.594 55.556 12.24 0.74 0.00 3.58
809 913 2.126734 GGCTGCGCATGTTCACAC 60.127 61.111 12.24 0.00 0.00 3.82
810 914 2.126734 GCTGCGCATGTTCACACC 60.127 61.111 12.24 0.00 0.00 4.16
811 915 2.620112 GCTGCGCATGTTCACACCT 61.620 57.895 12.24 0.00 0.00 4.00
812 916 1.298157 GCTGCGCATGTTCACACCTA 61.298 55.000 12.24 0.00 0.00 3.08
813 917 1.155889 CTGCGCATGTTCACACCTAA 58.844 50.000 12.24 0.00 0.00 2.69
814 918 1.535028 CTGCGCATGTTCACACCTAAA 59.465 47.619 12.24 0.00 0.00 1.85
815 919 1.950216 TGCGCATGTTCACACCTAAAA 59.050 42.857 5.66 0.00 0.00 1.52
816 920 2.359214 TGCGCATGTTCACACCTAAAAA 59.641 40.909 5.66 0.00 0.00 1.94
838 942 7.687941 AAAAAGTGACTGATCGAATACCATT 57.312 32.000 0.00 0.00 0.00 3.16
839 943 7.687941 AAAAGTGACTGATCGAATACCATTT 57.312 32.000 0.00 0.00 0.00 2.32
840 944 7.687941 AAAGTGACTGATCGAATACCATTTT 57.312 32.000 0.00 0.00 0.00 1.82
841 945 6.910536 AGTGACTGATCGAATACCATTTTC 57.089 37.500 0.00 0.00 0.00 2.29
842 946 6.406370 AGTGACTGATCGAATACCATTTTCA 58.594 36.000 0.00 0.00 0.00 2.69
843 947 6.536582 AGTGACTGATCGAATACCATTTTCAG 59.463 38.462 5.56 5.56 36.17 3.02
844 948 6.313905 GTGACTGATCGAATACCATTTTCAGT 59.686 38.462 11.23 11.23 43.53 3.41
845 949 6.910536 ACTGATCGAATACCATTTTCAGTC 57.089 37.500 6.69 0.00 38.26 3.51
846 950 5.520288 ACTGATCGAATACCATTTTCAGTCG 59.480 40.000 6.69 0.00 38.26 4.18
847 951 5.656480 TGATCGAATACCATTTTCAGTCGA 58.344 37.500 0.00 0.00 42.07 4.20
849 953 6.761242 TGATCGAATACCATTTTCAGTCGATT 59.239 34.615 7.45 0.00 45.90 3.34
850 954 6.344572 TCGAATACCATTTTCAGTCGATTG 57.655 37.500 0.68 0.68 34.33 2.67
851 955 5.293324 TCGAATACCATTTTCAGTCGATTGG 59.707 40.000 8.17 0.87 34.33 3.16
852 956 4.900635 ATACCATTTTCAGTCGATTGGC 57.099 40.909 8.17 0.00 0.00 4.52
853 957 2.513753 ACCATTTTCAGTCGATTGGCA 58.486 42.857 8.17 0.00 0.00 4.92
854 958 2.228822 ACCATTTTCAGTCGATTGGCAC 59.771 45.455 8.17 0.00 0.00 5.01
855 959 2.415893 CCATTTTCAGTCGATTGGCACC 60.416 50.000 8.17 0.00 0.00 5.01
856 960 2.270352 TTTTCAGTCGATTGGCACCT 57.730 45.000 8.17 0.00 0.00 4.00
857 961 1.522668 TTTCAGTCGATTGGCACCTG 58.477 50.000 8.17 0.00 0.00 4.00
858 962 0.321564 TTCAGTCGATTGGCACCTGG 60.322 55.000 8.17 0.00 0.00 4.45
859 963 2.045926 AGTCGATTGGCACCTGGC 60.046 61.111 0.00 0.00 43.74 4.85
860 964 3.499737 GTCGATTGGCACCTGGCG 61.500 66.667 0.00 0.00 46.16 5.69
861 965 4.776322 TCGATTGGCACCTGGCGG 62.776 66.667 0.00 0.00 46.16 6.13
863 967 3.134127 GATTGGCACCTGGCGGTC 61.134 66.667 0.00 0.00 43.24 4.79
864 968 4.740822 ATTGGCACCTGGCGGTCC 62.741 66.667 0.00 4.64 43.24 4.46
869 973 3.953775 CACCTGGCGGTCCCAACT 61.954 66.667 0.00 0.00 44.81 3.16
870 974 3.637273 ACCTGGCGGTCCCAACTC 61.637 66.667 0.00 0.00 44.81 3.01
871 975 4.410400 CCTGGCGGTCCCAACTCC 62.410 72.222 0.00 0.00 44.81 3.85
872 976 4.410400 CTGGCGGTCCCAACTCCC 62.410 72.222 0.00 0.00 44.81 4.30
874 978 4.717313 GGCGGTCCCAACTCCCAC 62.717 72.222 0.00 0.00 0.00 4.61
875 979 3.948719 GCGGTCCCAACTCCCACA 61.949 66.667 0.00 0.00 0.00 4.17
876 980 2.833227 CGGTCCCAACTCCCACAA 59.167 61.111 0.00 0.00 0.00 3.33
877 981 1.599797 CGGTCCCAACTCCCACAAC 60.600 63.158 0.00 0.00 0.00 3.32
878 982 1.534697 GGTCCCAACTCCCACAACA 59.465 57.895 0.00 0.00 0.00 3.33
879 983 0.822121 GGTCCCAACTCCCACAACAC 60.822 60.000 0.00 0.00 0.00 3.32
880 984 0.106918 GTCCCAACTCCCACAACACA 60.107 55.000 0.00 0.00 0.00 3.72
881 985 0.182537 TCCCAACTCCCACAACACAG 59.817 55.000 0.00 0.00 0.00 3.66
882 986 1.455383 CCCAACTCCCACAACACAGC 61.455 60.000 0.00 0.00 0.00 4.40
883 987 0.466189 CCAACTCCCACAACACAGCT 60.466 55.000 0.00 0.00 0.00 4.24
884 988 0.947244 CAACTCCCACAACACAGCTC 59.053 55.000 0.00 0.00 0.00 4.09
885 989 0.532862 AACTCCCACAACACAGCTCG 60.533 55.000 0.00 0.00 0.00 5.03
886 990 1.367471 CTCCCACAACACAGCTCGA 59.633 57.895 0.00 0.00 0.00 4.04
887 991 0.668706 CTCCCACAACACAGCTCGAG 60.669 60.000 8.45 8.45 0.00 4.04
888 992 2.320587 CCCACAACACAGCTCGAGC 61.321 63.158 30.01 30.01 42.49 5.03
906 1010 0.103937 GCTCCACCTTCTCTGGATCG 59.896 60.000 0.00 0.00 37.18 3.69
908 1012 2.315176 CTCCACCTTCTCTGGATCGAT 58.685 52.381 0.00 0.00 37.18 3.59
911 1015 2.035704 CCACCTTCTCTGGATCGATCTG 59.964 54.545 23.96 16.77 0.00 2.90
922 1026 2.349886 GGATCGATCTGCAAGTCAACAC 59.650 50.000 23.96 0.00 33.76 3.32
925 1029 0.798776 GATCTGCAAGTCAACACCCG 59.201 55.000 0.00 0.00 33.76 5.28
1005 1116 1.221840 GTCCGACATCTGCATGGGT 59.778 57.895 0.00 0.00 33.82 4.51
1046 1160 0.747283 GAAGACCAGGCATCTGCTGG 60.747 60.000 14.93 14.93 41.71 4.85
1051 1165 3.736224 AGGCATCTGCTGGTGGGG 61.736 66.667 5.95 0.00 41.70 4.96
1107 1221 2.508891 GCGCGTCATCCTCGAGTTG 61.509 63.158 12.31 8.89 0.00 3.16
1177 1291 3.832237 CAGGCGACCTGCACCAACT 62.832 63.158 12.01 0.00 45.13 3.16
1238 1352 3.799755 GATGCACGCGTTCCCCAC 61.800 66.667 10.22 0.00 0.00 4.61
1518 1675 4.849329 CTGTACGCGTCCGGCTCC 62.849 72.222 18.63 0.00 40.44 4.70
1638 1795 2.433145 CTGCGTGTCATCCGTGCT 60.433 61.111 0.00 0.00 0.00 4.40
1672 1829 1.300620 CTTCTCCACACGTTCGCCA 60.301 57.895 0.00 0.00 0.00 5.69
1706 1863 5.235831 GCGAAGTTTTAGACAGGTACAAACT 59.764 40.000 0.00 0.00 38.94 2.66
1735 1893 8.353423 TCCTCTTTAATTCTTGATTGAAAGGG 57.647 34.615 0.00 0.00 30.89 3.95
1750 1908 9.120538 TGATTGAAAGGGAAAATATACTACAGC 57.879 33.333 0.00 0.00 0.00 4.40
1751 1909 9.120538 GATTGAAAGGGAAAATATACTACAGCA 57.879 33.333 0.00 0.00 0.00 4.41
1752 1910 9.646522 ATTGAAAGGGAAAATATACTACAGCAT 57.353 29.630 0.00 0.00 0.00 3.79
1810 1968 4.635223 TGTCAGAGTTGATGAACTGGAAG 58.365 43.478 1.00 0.00 42.80 3.46
1861 2019 5.414789 TGTCGATTCTCCAAATCCAAGTA 57.585 39.130 0.00 0.00 0.00 2.24
1963 2121 1.450312 GTGGATCCTGGCGACCAAG 60.450 63.158 14.23 0.00 34.11 3.61
2004 2162 1.372087 GCTATGCAAACGCAGCTCCT 61.372 55.000 0.00 0.00 44.13 3.69
2050 2208 5.552178 GACAGGTTCAAGAATGACTACCTT 58.448 41.667 0.00 0.00 41.85 3.50
2101 2259 2.962569 CTCAGGTTCGCAGACGGA 59.037 61.111 0.00 0.00 40.63 4.69
2230 2388 2.058595 GCTCTTCTCCCGGCAGGTA 61.059 63.158 1.11 0.00 36.75 3.08
2281 2439 4.241555 AGGGTCATGATCGGCGGC 62.242 66.667 7.21 0.00 0.00 6.53
2395 2553 1.029947 TGTCCTGCATCGAGTCGCTA 61.030 55.000 7.92 0.00 0.00 4.26
2630 2788 2.360852 GGGGAGACGACGAGTGGA 60.361 66.667 0.00 0.00 0.00 4.02
2663 2821 4.724602 GCCGAGTCGAGCAGCACA 62.725 66.667 15.64 0.00 0.00 4.57
2666 2824 1.153958 CGAGTCGAGCAGCACATCA 60.154 57.895 6.73 0.00 0.00 3.07
2669 2827 1.444383 GTCGAGCAGCACATCACGA 60.444 57.895 0.00 0.00 0.00 4.35
2675 2833 0.737367 GCAGCACATCACGAGCTACA 60.737 55.000 0.00 0.00 39.83 2.74
2775 2933 0.999406 GCGCTCGAGAAAGCATACAA 59.001 50.000 18.75 0.00 42.62 2.41
2853 3011 2.202453 GTCGGAGAAGGTCGTCGC 60.202 66.667 0.00 0.00 39.69 5.19
2869 3027 4.241999 GCTGCTTATGGCGCGTGG 62.242 66.667 8.43 0.00 45.43 4.94
2873 3031 2.511373 CTTATGGCGCGTGGCTGA 60.511 61.111 23.71 8.44 42.94 4.26
2875 3033 1.835483 CTTATGGCGCGTGGCTGATC 61.835 60.000 23.71 0.00 42.94 2.92
2938 3096 4.263572 CTGGCCGGGTTGGTGTCA 62.264 66.667 2.57 0.00 41.21 3.58
2941 3099 2.112297 GCCGGGTTGGTGTCAGAA 59.888 61.111 2.18 0.00 41.21 3.02
2963 3121 1.270305 TGTTTGAAGGAGAGGACGCAG 60.270 52.381 0.00 0.00 0.00 5.18
3032 3190 1.153229 GCGGAGGTATGTGTTCCCC 60.153 63.158 0.00 0.00 0.00 4.81
3033 3191 1.143183 CGGAGGTATGTGTTCCCCG 59.857 63.158 0.00 0.00 33.76 5.73
3040 3198 0.912487 TATGTGTTCCCCGGCCTCTT 60.912 55.000 0.00 0.00 0.00 2.85
3041 3199 2.359975 GTGTTCCCCGGCCTCTTG 60.360 66.667 0.00 0.00 0.00 3.02
3042 3200 3.646715 TGTTCCCCGGCCTCTTGG 61.647 66.667 0.00 0.00 0.00 3.61
3081 3239 1.037493 GGCGGTTTCTTTCTTGGGTT 58.963 50.000 0.00 0.00 0.00 4.11
3114 3272 3.624410 TCATGAATTTGCAGATCAGGTCG 59.376 43.478 0.00 0.00 0.00 4.79
3120 3278 1.332889 TGCAGATCAGGTCGCAGGAT 61.333 55.000 0.00 0.00 33.58 3.24
3129 3287 1.137872 AGGTCGCAGGATCTCAATGAC 59.862 52.381 0.00 0.00 0.00 3.06
3155 3313 6.907853 ATCATCAGATAATCAACTCGGAGA 57.092 37.500 12.86 0.00 31.14 3.71
3295 3453 2.224695 TGTTCTAGACGACTGGACCAGA 60.225 50.000 28.56 3.16 33.52 3.86
3320 3478 1.226974 ACCATCCGCAAGATCGACG 60.227 57.895 0.00 0.00 43.02 5.12
3358 3516 3.391382 CCCGACCTGGACCTGGAC 61.391 72.222 23.36 16.07 42.00 4.02
3359 3517 3.391382 CCGACCTGGACCTGGACC 61.391 72.222 23.36 8.34 42.00 4.46
3360 3518 2.283966 CGACCTGGACCTGGACCT 60.284 66.667 23.36 1.40 0.00 3.85
3361 3519 2.650116 CGACCTGGACCTGGACCTG 61.650 68.421 23.36 14.74 0.00 4.00
3363 3521 2.122729 CCTGGACCTGGACCTGGA 59.877 66.667 28.41 4.64 45.37 3.86
3391 3549 2.577593 GTCCGGCTAGTGTCACCC 59.422 66.667 0.00 0.00 0.00 4.61
3392 3550 3.066190 TCCGGCTAGTGTCACCCG 61.066 66.667 11.05 11.05 40.39 5.28
3398 3556 1.079819 CTAGTGTCACCCGCACCTG 60.080 63.158 0.00 0.00 37.56 4.00
3521 3679 4.779733 GCCCTCTCCTCCCGGACA 62.780 72.222 0.73 0.00 34.92 4.02
3523 3681 2.760385 CCTCTCCTCCCGGACACC 60.760 72.222 0.73 0.00 34.92 4.16
3592 3750 0.109458 TGTACGCGCTGAAGTACAGG 60.109 55.000 18.23 0.00 45.49 4.00
3603 3761 4.742417 CTGAAGTACAGGATCTGTGACAG 58.258 47.826 6.18 6.18 45.01 3.51
3637 3795 2.347490 GTGATGTCCACGGCCTGT 59.653 61.111 0.00 0.00 35.86 4.00
3650 3808 1.296715 GCCTGTGTCGAGGATTGGT 59.703 57.895 0.00 0.00 34.69 3.67
3786 3944 1.789464 CACTCTCTTCGTGTCTTGTGC 59.211 52.381 0.00 0.00 0.00 4.57
3797 3955 2.117779 TCTTGTGCAAACAGCCGCA 61.118 52.632 0.00 0.00 44.83 5.69
3799 3957 1.210545 CTTGTGCAAACAGCCGCAAG 61.211 55.000 0.00 0.00 43.53 4.01
3886 4047 2.368548 GTTGCCTTTCCAAAATCAGGGT 59.631 45.455 0.00 0.00 0.00 4.34
3925 4086 4.778143 GCATGGGTCGGCCTTCGT 62.778 66.667 5.77 0.00 40.32 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 131 4.479993 GCCCGACATGCTGCCTCT 62.480 66.667 0.00 0.00 0.00 3.69
134 150 2.594592 GCTCCCGCCAAGTGTTGT 60.595 61.111 0.00 0.00 0.00 3.32
135 151 3.726517 CGCTCCCGCCAAGTGTTG 61.727 66.667 0.00 0.00 0.00 3.33
233 306 2.994699 TCCCGCGGGAATCAATGT 59.005 55.556 43.93 0.00 42.05 2.71
360 458 0.031585 GTTGGTTTGGGCCGAAGTTC 59.968 55.000 6.41 0.51 0.00 3.01
395 494 2.902423 AAAACAGCCAGTCGTGCCCA 62.902 55.000 0.00 0.00 0.00 5.36
438 541 1.153756 CCAACAAGGCCCTCCAAGT 59.846 57.895 0.00 0.00 33.74 3.16
478 582 2.037772 AGGGCTTCTGAACTGTGTACTG 59.962 50.000 0.00 0.00 0.00 2.74
484 588 2.301346 CAAACAGGGCTTCTGAACTGT 58.699 47.619 13.08 6.38 46.18 3.55
485 589 1.610522 CCAAACAGGGCTTCTGAACTG 59.389 52.381 13.08 5.30 46.18 3.16
486 590 1.215423 ACCAAACAGGGCTTCTGAACT 59.785 47.619 13.08 0.00 46.18 3.01
487 591 1.692411 ACCAAACAGGGCTTCTGAAC 58.308 50.000 13.08 0.00 46.18 3.18
488 592 2.306847 GAACCAAACAGGGCTTCTGAA 58.693 47.619 13.08 0.00 46.18 3.02
489 593 1.214175 TGAACCAAACAGGGCTTCTGA 59.786 47.619 13.08 0.00 46.18 3.27
491 595 2.683211 ATGAACCAAACAGGGCTTCT 57.317 45.000 0.00 0.00 43.89 2.85
492 596 3.826729 ACTTATGAACCAAACAGGGCTTC 59.173 43.478 0.00 0.00 43.89 3.86
493 597 3.826729 GACTTATGAACCAAACAGGGCTT 59.173 43.478 0.00 0.00 43.89 4.35
494 598 3.421844 GACTTATGAACCAAACAGGGCT 58.578 45.455 0.00 0.00 43.89 5.19
495 599 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
496 600 4.034285 AGGACTTATGAACCAAACAGGG 57.966 45.455 0.00 0.00 43.89 4.45
497 601 5.045869 TCCTAGGACTTATGAACCAAACAGG 60.046 44.000 7.62 0.00 45.67 4.00
498 602 5.875359 GTCCTAGGACTTATGAACCAAACAG 59.125 44.000 31.12 0.00 41.57 3.16
499 603 5.801380 GTCCTAGGACTTATGAACCAAACA 58.199 41.667 31.12 0.00 41.57 2.83
525 629 7.757611 TGGGACTTATAAGTTGGGACTAAAAA 58.242 34.615 18.96 0.00 39.88 1.94
526 630 7.332433 TGGGACTTATAAGTTGGGACTAAAA 57.668 36.000 18.96 0.00 39.88 1.52
527 631 6.956102 TGGGACTTATAAGTTGGGACTAAA 57.044 37.500 18.96 0.00 39.88 1.85
528 632 6.502863 ACTTGGGACTTATAAGTTGGGACTAA 59.497 38.462 18.96 10.32 39.88 2.24
529 633 6.027482 ACTTGGGACTTATAAGTTGGGACTA 58.973 40.000 18.96 3.96 39.88 2.59
530 634 4.850386 ACTTGGGACTTATAAGTTGGGACT 59.150 41.667 18.96 0.00 39.88 3.85
531 635 5.175388 ACTTGGGACTTATAAGTTGGGAC 57.825 43.478 18.96 6.19 39.88 4.46
532 636 4.226620 GGACTTGGGACTTATAAGTTGGGA 59.773 45.833 18.96 6.15 39.88 4.37
533 637 4.227527 AGGACTTGGGACTTATAAGTTGGG 59.772 45.833 18.96 10.37 39.88 4.12
534 638 5.437191 AGGACTTGGGACTTATAAGTTGG 57.563 43.478 18.96 10.07 39.88 3.77
535 639 8.857694 TTTAAGGACTTGGGACTTATAAGTTG 57.142 34.615 18.96 9.81 39.88 3.16
536 640 9.871175 TTTTTAAGGACTTGGGACTTATAAGTT 57.129 29.630 18.96 2.29 39.88 2.66
537 641 9.516546 CTTTTTAAGGACTTGGGACTTATAAGT 57.483 33.333 18.05 18.05 43.16 2.24
538 642 9.516546 ACTTTTTAAGGACTTGGGACTTATAAG 57.483 33.333 11.05 11.05 31.77 1.73
540 644 9.948964 GTACTTTTTAAGGACTTGGGACTTATA 57.051 33.333 0.00 0.00 39.36 0.98
541 645 7.886970 GGTACTTTTTAAGGACTTGGGACTTAT 59.113 37.037 2.11 0.00 42.25 1.73
542 646 7.072834 AGGTACTTTTTAAGGACTTGGGACTTA 59.927 37.037 2.11 0.00 42.25 2.24
543 647 6.066690 GGTACTTTTTAAGGACTTGGGACTT 58.933 40.000 2.11 0.00 42.25 3.01
544 648 5.371769 AGGTACTTTTTAAGGACTTGGGACT 59.628 40.000 2.11 0.00 42.25 3.85
545 649 5.628130 AGGTACTTTTTAAGGACTTGGGAC 58.372 41.667 2.11 0.00 42.25 4.46
546 650 5.917545 AGGTACTTTTTAAGGACTTGGGA 57.082 39.130 2.11 0.00 42.25 4.37
547 651 5.942236 GGTAGGTACTTTTTAAGGACTTGGG 59.058 44.000 2.11 0.00 42.25 4.12
548 652 6.653740 CAGGTAGGTACTTTTTAAGGACTTGG 59.346 42.308 2.11 0.00 42.25 3.61
549 653 7.222161 ACAGGTAGGTACTTTTTAAGGACTTG 58.778 38.462 2.11 0.00 42.25 3.16
550 654 7.384524 ACAGGTAGGTACTTTTTAAGGACTT 57.615 36.000 2.11 0.00 42.25 3.01
551 655 7.384524 AACAGGTAGGTACTTTTTAAGGACT 57.615 36.000 2.11 0.00 42.25 3.85
552 656 7.040892 CCAAACAGGTAGGTACTTTTTAAGGAC 60.041 40.741 0.00 0.00 41.86 3.85
553 657 6.999871 CCAAACAGGTAGGTACTTTTTAAGGA 59.000 38.462 0.00 0.00 41.75 3.36
554 658 7.210718 CCAAACAGGTAGGTACTTTTTAAGG 57.789 40.000 0.00 0.00 41.75 2.69
570 674 0.478507 AGTCCCAGGAACCAAACAGG 59.521 55.000 0.00 0.00 45.67 4.00
571 675 2.364972 AAGTCCCAGGAACCAAACAG 57.635 50.000 0.00 0.00 0.00 3.16
572 676 5.073965 ACTTATAAGTCCCAGGAACCAAACA 59.926 40.000 12.50 0.00 32.86 2.83
573 677 5.567430 ACTTATAAGTCCCAGGAACCAAAC 58.433 41.667 12.50 0.00 32.86 2.93
574 678 5.853572 ACTTATAAGTCCCAGGAACCAAA 57.146 39.130 12.50 0.00 32.86 3.28
593 697 9.448587 AGTTGTAATATGGTCTTATAGGGACTT 57.551 33.333 7.52 0.00 41.75 3.01
603 707 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
612 716 9.372189 GGGACTTATAGGGACTTATAGTTGTAA 57.628 37.037 0.00 0.00 41.75 2.41
613 717 8.740512 AGGGACTTATAGGGACTTATAGTTGTA 58.259 37.037 0.00 0.00 34.75 2.41
614 718 7.602868 AGGGACTTATAGGGACTTATAGTTGT 58.397 38.462 0.00 0.00 34.75 3.32
615 719 7.178805 GGAGGGACTTATAGGGACTTATAGTTG 59.821 44.444 0.00 0.00 41.55 3.16
616 720 7.076566 AGGAGGGACTTATAGGGACTTATAGTT 59.923 40.741 0.00 0.00 41.55 2.24
617 721 6.571180 AGGAGGGACTTATAGGGACTTATAGT 59.429 42.308 0.00 0.00 41.55 2.12
618 722 7.046891 AGGAGGGACTTATAGGGACTTATAG 57.953 44.000 0.00 0.00 41.55 1.31
619 723 7.431936 AAGGAGGGACTTATAGGGACTTATA 57.568 40.000 0.00 0.00 41.55 0.98
620 724 5.970692 AGGAGGGACTTATAGGGACTTAT 57.029 43.478 0.00 0.00 41.55 1.73
621 725 5.763239 AAGGAGGGACTTATAGGGACTTA 57.237 43.478 0.00 0.00 41.55 2.24
622 726 4.645968 AAGGAGGGACTTATAGGGACTT 57.354 45.455 0.00 0.00 41.55 3.01
623 727 5.439059 TCTTAAGGAGGGACTTATAGGGACT 59.561 44.000 1.85 0.00 41.55 3.85
624 728 5.713807 TCTTAAGGAGGGACTTATAGGGAC 58.286 45.833 1.85 0.00 41.55 4.46
625 729 5.439059 ACTCTTAAGGAGGGACTTATAGGGA 59.561 44.000 1.85 0.00 45.83 4.20
626 730 5.718039 ACTCTTAAGGAGGGACTTATAGGG 58.282 45.833 1.85 0.00 45.83 3.53
627 731 6.616577 AGACTCTTAAGGAGGGACTTATAGG 58.383 44.000 1.85 0.00 45.83 2.57
628 732 9.816787 ATAAGACTCTTAAGGAGGGACTTATAG 57.183 37.037 1.85 0.00 45.83 1.31
630 734 9.508721 AAATAAGACTCTTAAGGAGGGACTTAT 57.491 33.333 1.85 11.48 45.83 1.73
631 735 8.912614 AAATAAGACTCTTAAGGAGGGACTTA 57.087 34.615 1.85 10.13 45.83 2.24
632 736 7.458170 TGAAATAAGACTCTTAAGGAGGGACTT 59.542 37.037 1.85 8.68 45.83 3.01
633 737 6.960542 TGAAATAAGACTCTTAAGGAGGGACT 59.039 38.462 1.85 0.00 45.83 3.85
634 738 7.184067 TGAAATAAGACTCTTAAGGAGGGAC 57.816 40.000 1.85 0.00 45.83 4.46
635 739 7.996758 ATGAAATAAGACTCTTAAGGAGGGA 57.003 36.000 1.85 0.00 45.83 4.20
651 755 7.615365 AGTGAGCATTTGGGACTTATGAAATAA 59.385 33.333 0.00 0.00 36.20 1.40
652 756 7.118723 AGTGAGCATTTGGGACTTATGAAATA 58.881 34.615 0.00 0.00 0.00 1.40
653 757 5.954150 AGTGAGCATTTGGGACTTATGAAAT 59.046 36.000 0.00 0.00 0.00 2.17
654 758 5.324409 AGTGAGCATTTGGGACTTATGAAA 58.676 37.500 0.00 0.00 0.00 2.69
655 759 4.922206 AGTGAGCATTTGGGACTTATGAA 58.078 39.130 0.00 0.00 0.00 2.57
656 760 4.574674 AGTGAGCATTTGGGACTTATGA 57.425 40.909 0.00 0.00 0.00 2.15
657 761 5.649782 AAAGTGAGCATTTGGGACTTATG 57.350 39.130 0.00 0.00 0.00 1.90
658 762 6.948309 ACTTAAAGTGAGCATTTGGGACTTAT 59.052 34.615 0.00 0.00 0.00 1.73
659 763 6.303839 ACTTAAAGTGAGCATTTGGGACTTA 58.696 36.000 0.00 0.00 0.00 2.24
660 764 5.140454 ACTTAAAGTGAGCATTTGGGACTT 58.860 37.500 0.00 0.00 0.00 3.01
661 765 4.729868 ACTTAAAGTGAGCATTTGGGACT 58.270 39.130 0.00 0.00 0.00 3.85
662 766 4.082733 GGACTTAAAGTGAGCATTTGGGAC 60.083 45.833 0.00 0.00 0.00 4.46
663 767 4.079253 GGACTTAAAGTGAGCATTTGGGA 58.921 43.478 0.00 0.00 0.00 4.37
664 768 3.193479 GGGACTTAAAGTGAGCATTTGGG 59.807 47.826 0.00 0.00 0.00 4.12
665 769 4.082125 AGGGACTTAAAGTGAGCATTTGG 58.918 43.478 0.00 0.00 27.25 3.28
666 770 5.705441 TGTAGGGACTTAAAGTGAGCATTTG 59.295 40.000 0.00 0.00 41.75 2.32
667 771 5.876357 TGTAGGGACTTAAAGTGAGCATTT 58.124 37.500 0.00 0.00 41.75 2.32
668 772 5.499004 TGTAGGGACTTAAAGTGAGCATT 57.501 39.130 0.00 0.00 41.75 3.56
669 773 5.013183 ACTTGTAGGGACTTAAAGTGAGCAT 59.987 40.000 0.00 0.00 40.03 3.79
670 774 4.347000 ACTTGTAGGGACTTAAAGTGAGCA 59.653 41.667 0.00 0.00 40.03 4.26
671 775 4.895961 ACTTGTAGGGACTTAAAGTGAGC 58.104 43.478 0.00 0.00 40.03 4.26
672 776 5.480205 GGACTTGTAGGGACTTAAAGTGAG 58.520 45.833 0.00 0.00 41.07 3.51
673 777 4.285260 GGGACTTGTAGGGACTTAAAGTGA 59.715 45.833 0.00 0.00 41.07 3.41
674 778 4.286291 AGGGACTTGTAGGGACTTAAAGTG 59.714 45.833 0.00 0.00 41.07 3.16
675 779 4.500452 AGGGACTTGTAGGGACTTAAAGT 58.500 43.478 0.00 0.00 42.79 2.66
676 780 4.081031 GGAGGGACTTGTAGGGACTTAAAG 60.081 50.000 0.00 0.00 41.55 1.85
677 781 3.842436 GGAGGGACTTGTAGGGACTTAAA 59.158 47.826 0.00 0.00 41.55 1.52
678 782 3.078612 AGGAGGGACTTGTAGGGACTTAA 59.921 47.826 0.00 0.00 41.55 1.85
679 783 2.658489 AGGAGGGACTTGTAGGGACTTA 59.342 50.000 0.00 0.00 41.55 2.24
680 784 1.437547 AGGAGGGACTTGTAGGGACTT 59.562 52.381 0.00 0.00 41.55 3.01
681 785 1.094269 AGGAGGGACTTGTAGGGACT 58.906 55.000 0.00 0.00 41.55 3.85
682 786 1.196012 CAGGAGGGACTTGTAGGGAC 58.804 60.000 0.00 0.00 41.55 4.46
683 787 0.790993 ACAGGAGGGACTTGTAGGGA 59.209 55.000 0.00 0.00 41.55 4.20
684 788 1.657804 AACAGGAGGGACTTGTAGGG 58.342 55.000 0.00 0.00 41.55 3.53
685 789 2.290323 CCAAACAGGAGGGACTTGTAGG 60.290 54.545 0.00 0.00 41.55 3.18
686 790 2.372172 ACCAAACAGGAGGGACTTGTAG 59.628 50.000 0.00 0.00 41.55 2.74
687 791 2.414612 ACCAAACAGGAGGGACTTGTA 58.585 47.619 0.00 0.00 41.55 2.41
688 792 1.222567 ACCAAACAGGAGGGACTTGT 58.777 50.000 0.00 0.00 41.55 3.16
689 793 2.362077 CAAACCAAACAGGAGGGACTTG 59.638 50.000 0.00 0.00 41.55 3.16
690 794 2.666317 CAAACCAAACAGGAGGGACTT 58.334 47.619 0.00 0.00 41.55 3.01
692 796 1.133606 TCCAAACCAAACAGGAGGGAC 60.134 52.381 0.00 0.00 41.22 4.46
693 797 1.227249 TCCAAACCAAACAGGAGGGA 58.773 50.000 0.00 0.00 41.22 4.20
694 798 1.895131 CATCCAAACCAAACAGGAGGG 59.105 52.381 0.00 0.00 41.22 4.30
695 799 1.895131 CCATCCAAACCAAACAGGAGG 59.105 52.381 0.00 0.00 41.22 4.30
696 800 1.895131 CCCATCCAAACCAAACAGGAG 59.105 52.381 0.00 0.00 41.22 3.69
697 801 1.501170 TCCCATCCAAACCAAACAGGA 59.499 47.619 0.00 0.00 41.22 3.86
698 802 1.618343 GTCCCATCCAAACCAAACAGG 59.382 52.381 0.00 0.00 45.67 4.00
699 803 1.618343 GGTCCCATCCAAACCAAACAG 59.382 52.381 0.00 0.00 33.11 3.16
700 804 1.219213 AGGTCCCATCCAAACCAAACA 59.781 47.619 0.00 0.00 35.43 2.83
701 805 2.009681 AGGTCCCATCCAAACCAAAC 57.990 50.000 0.00 0.00 35.43 2.93
702 806 4.791334 TCTATAGGTCCCATCCAAACCAAA 59.209 41.667 0.00 0.00 35.43 3.28
703 807 4.376223 TCTATAGGTCCCATCCAAACCAA 58.624 43.478 0.00 0.00 35.43 3.67
704 808 3.973973 CTCTATAGGTCCCATCCAAACCA 59.026 47.826 0.00 0.00 35.43 3.67
705 809 4.040584 GTCTCTATAGGTCCCATCCAAACC 59.959 50.000 0.00 0.00 0.00 3.27
706 810 4.654262 TGTCTCTATAGGTCCCATCCAAAC 59.346 45.833 0.00 0.00 0.00 2.93
707 811 4.890988 TGTCTCTATAGGTCCCATCCAAA 58.109 43.478 0.00 0.00 0.00 3.28
708 812 4.552883 TGTCTCTATAGGTCCCATCCAA 57.447 45.455 0.00 0.00 0.00 3.53
709 813 4.767000 ATGTCTCTATAGGTCCCATCCA 57.233 45.455 0.00 0.00 0.00 3.41
710 814 6.441088 AAAATGTCTCTATAGGTCCCATCC 57.559 41.667 0.00 0.00 0.00 3.51
711 815 9.495572 CTTAAAAATGTCTCTATAGGTCCCATC 57.504 37.037 0.00 0.00 0.00 3.51
712 816 9.004231 ACTTAAAAATGTCTCTATAGGTCCCAT 57.996 33.333 0.00 0.00 0.00 4.00
713 817 8.388656 ACTTAAAAATGTCTCTATAGGTCCCA 57.611 34.615 0.00 0.00 0.00 4.37
714 818 7.932491 GGACTTAAAAATGTCTCTATAGGTCCC 59.068 40.741 0.00 0.00 34.97 4.46
715 819 7.932491 GGGACTTAAAAATGTCTCTATAGGTCC 59.068 40.741 0.00 3.98 38.24 4.46
716 820 8.706521 AGGGACTTAAAAATGTCTCTATAGGTC 58.293 37.037 0.00 0.00 41.69 3.85
717 821 8.625467 AGGGACTTAAAAATGTCTCTATAGGT 57.375 34.615 0.00 0.00 41.69 3.08
721 825 7.993758 GGCTTAGGGACTTAAAAATGTCTCTAT 59.006 37.037 3.93 0.00 43.29 1.98
722 826 7.037873 TGGCTTAGGGACTTAAAAATGTCTCTA 60.038 37.037 0.00 0.00 41.69 2.43
723 827 6.181190 GGCTTAGGGACTTAAAAATGTCTCT 58.819 40.000 0.00 0.00 45.03 3.10
724 828 5.944007 TGGCTTAGGGACTTAAAAATGTCTC 59.056 40.000 0.00 0.00 41.75 3.36
725 829 5.887754 TGGCTTAGGGACTTAAAAATGTCT 58.112 37.500 0.00 0.00 41.75 3.41
726 830 6.584185 TTGGCTTAGGGACTTAAAAATGTC 57.416 37.500 0.00 0.00 41.75 3.06
727 831 8.658840 TTATTGGCTTAGGGACTTAAAAATGT 57.341 30.769 0.00 0.00 41.75 2.71
728 832 8.749354 ACTTATTGGCTTAGGGACTTAAAAATG 58.251 33.333 0.00 0.00 41.75 2.32
729 833 8.895141 ACTTATTGGCTTAGGGACTTAAAAAT 57.105 30.769 0.00 0.00 41.75 1.82
730 834 7.395206 GGACTTATTGGCTTAGGGACTTAAAAA 59.605 37.037 0.00 0.00 41.75 1.94
731 835 6.888088 GGACTTATTGGCTTAGGGACTTAAAA 59.112 38.462 0.00 0.00 41.75 1.52
732 836 6.420638 GGACTTATTGGCTTAGGGACTTAAA 58.579 40.000 0.00 0.00 41.75 1.52
733 837 5.104235 GGGACTTATTGGCTTAGGGACTTAA 60.104 44.000 0.00 0.00 41.75 1.85
734 838 4.411212 GGGACTTATTGGCTTAGGGACTTA 59.589 45.833 0.00 0.00 41.75 2.24
735 839 3.202373 GGGACTTATTGGCTTAGGGACTT 59.798 47.826 0.00 0.00 41.75 3.01
736 840 2.778270 GGGACTTATTGGCTTAGGGACT 59.222 50.000 0.00 0.00 46.37 3.85
737 841 2.778270 AGGGACTTATTGGCTTAGGGAC 59.222 50.000 0.00 0.00 27.25 4.46
738 842 2.777692 CAGGGACTTATTGGCTTAGGGA 59.222 50.000 0.00 0.00 34.60 4.20
739 843 2.158608 CCAGGGACTTATTGGCTTAGGG 60.159 54.545 0.00 0.00 34.60 3.53
740 844 2.777692 TCCAGGGACTTATTGGCTTAGG 59.222 50.000 0.00 0.00 34.60 2.69
741 845 4.503714 TTCCAGGGACTTATTGGCTTAG 57.496 45.455 0.00 0.00 34.60 2.18
742 846 4.043561 TGTTTCCAGGGACTTATTGGCTTA 59.956 41.667 0.00 0.00 34.60 3.09
743 847 3.181423 TGTTTCCAGGGACTTATTGGCTT 60.181 43.478 0.00 0.00 34.60 4.35
744 848 2.378547 TGTTTCCAGGGACTTATTGGCT 59.621 45.455 0.00 0.00 34.60 4.75
745 849 2.802719 TGTTTCCAGGGACTTATTGGC 58.197 47.619 0.00 0.00 34.60 4.52
746 850 4.586841 TGTTTGTTTCCAGGGACTTATTGG 59.413 41.667 0.00 0.00 34.60 3.16
747 851 5.508994 GGTGTTTGTTTCCAGGGACTTATTG 60.509 44.000 0.00 0.00 34.60 1.90
748 852 4.587262 GGTGTTTGTTTCCAGGGACTTATT 59.413 41.667 0.00 0.00 34.60 1.40
749 853 4.149598 GGTGTTTGTTTCCAGGGACTTAT 58.850 43.478 0.00 0.00 34.60 1.73
750 854 3.558033 GGTGTTTGTTTCCAGGGACTTA 58.442 45.455 0.00 0.00 34.60 2.24
751 855 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
752 856 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
753 857 1.037493 GGGTGTTTGTTTCCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
754 858 0.930726 AGGGTGTTTGTTTCCAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
755 859 1.328279 GAGGGTGTTTGTTTCCAGGG 58.672 55.000 0.00 0.00 0.00 4.45
756 860 1.133482 AGGAGGGTGTTTGTTTCCAGG 60.133 52.381 0.00 0.00 0.00 4.45
757 861 2.364972 AGGAGGGTGTTTGTTTCCAG 57.635 50.000 0.00 0.00 0.00 3.86
758 862 2.781174 ACTAGGAGGGTGTTTGTTTCCA 59.219 45.455 0.00 0.00 0.00 3.53
759 863 3.072622 AGACTAGGAGGGTGTTTGTTTCC 59.927 47.826 0.00 0.00 0.00 3.13
760 864 4.353383 AGACTAGGAGGGTGTTTGTTTC 57.647 45.455 0.00 0.00 0.00 2.78
761 865 6.449830 AATAGACTAGGAGGGTGTTTGTTT 57.550 37.500 0.00 0.00 0.00 2.83
762 866 6.449830 AAATAGACTAGGAGGGTGTTTGTT 57.550 37.500 0.00 0.00 0.00 2.83
763 867 6.449830 AAAATAGACTAGGAGGGTGTTTGT 57.550 37.500 0.00 0.00 0.00 2.83
764 868 7.119846 CAGAAAAATAGACTAGGAGGGTGTTTG 59.880 40.741 0.00 0.00 0.00 2.93
765 869 7.168905 CAGAAAAATAGACTAGGAGGGTGTTT 58.831 38.462 0.00 0.00 0.00 2.83
766 870 6.272558 ACAGAAAAATAGACTAGGAGGGTGTT 59.727 38.462 0.00 0.00 0.00 3.32
767 871 5.785940 ACAGAAAAATAGACTAGGAGGGTGT 59.214 40.000 0.00 0.00 0.00 4.16
768 872 6.109359 CACAGAAAAATAGACTAGGAGGGTG 58.891 44.000 0.00 0.00 0.00 4.61
769 873 5.189934 CCACAGAAAAATAGACTAGGAGGGT 59.810 44.000 0.00 0.00 0.00 4.34
770 874 5.675538 CCACAGAAAAATAGACTAGGAGGG 58.324 45.833 0.00 0.00 0.00 4.30
771 875 5.104735 AGCCACAGAAAAATAGACTAGGAGG 60.105 44.000 0.00 0.00 0.00 4.30
772 876 5.814705 CAGCCACAGAAAAATAGACTAGGAG 59.185 44.000 0.00 0.00 0.00 3.69
773 877 5.734720 CAGCCACAGAAAAATAGACTAGGA 58.265 41.667 0.00 0.00 0.00 2.94
774 878 4.333926 GCAGCCACAGAAAAATAGACTAGG 59.666 45.833 0.00 0.00 0.00 3.02
775 879 4.033358 CGCAGCCACAGAAAAATAGACTAG 59.967 45.833 0.00 0.00 0.00 2.57
776 880 3.932710 CGCAGCCACAGAAAAATAGACTA 59.067 43.478 0.00 0.00 0.00 2.59
777 881 2.744202 CGCAGCCACAGAAAAATAGACT 59.256 45.455 0.00 0.00 0.00 3.24
778 882 3.122937 CGCAGCCACAGAAAAATAGAC 57.877 47.619 0.00 0.00 0.00 2.59
794 898 1.155889 TTAGGTGTGAACATGCGCAG 58.844 50.000 18.32 10.85 0.00 5.18
795 899 1.598882 TTTAGGTGTGAACATGCGCA 58.401 45.000 14.96 14.96 0.00 6.09
796 900 2.697431 TTTTAGGTGTGAACATGCGC 57.303 45.000 0.00 0.00 0.00 6.09
814 918 7.687941 AATGGTATTCGATCAGTCACTTTTT 57.312 32.000 0.00 0.00 0.00 1.94
815 919 7.687941 AAATGGTATTCGATCAGTCACTTTT 57.312 32.000 0.00 0.00 0.00 2.27
816 920 7.390440 TGAAAATGGTATTCGATCAGTCACTTT 59.610 33.333 0.00 0.00 0.00 2.66
817 921 6.878923 TGAAAATGGTATTCGATCAGTCACTT 59.121 34.615 0.00 0.00 0.00 3.16
818 922 6.406370 TGAAAATGGTATTCGATCAGTCACT 58.594 36.000 0.00 0.00 0.00 3.41
819 923 6.313905 ACTGAAAATGGTATTCGATCAGTCAC 59.686 38.462 6.69 0.00 41.41 3.67
820 924 6.406370 ACTGAAAATGGTATTCGATCAGTCA 58.594 36.000 6.69 0.00 41.41 3.41
821 925 6.910536 ACTGAAAATGGTATTCGATCAGTC 57.089 37.500 6.69 0.00 41.41 3.51
822 926 5.520288 CGACTGAAAATGGTATTCGATCAGT 59.480 40.000 11.23 11.23 46.16 3.41
823 927 5.748630 TCGACTGAAAATGGTATTCGATCAG 59.251 40.000 5.56 5.56 38.91 2.90
824 928 5.656480 TCGACTGAAAATGGTATTCGATCA 58.344 37.500 0.00 0.00 0.00 2.92
825 929 6.771188 ATCGACTGAAAATGGTATTCGATC 57.229 37.500 0.00 0.00 39.82 3.69
826 930 6.017934 CCAATCGACTGAAAATGGTATTCGAT 60.018 38.462 0.00 0.00 44.34 3.59
827 931 5.293324 CCAATCGACTGAAAATGGTATTCGA 59.707 40.000 0.00 0.00 38.29 3.71
828 932 5.501715 CCAATCGACTGAAAATGGTATTCG 58.498 41.667 0.00 0.00 0.00 3.34
829 933 5.163663 TGCCAATCGACTGAAAATGGTATTC 60.164 40.000 0.00 0.00 32.17 1.75
830 934 4.704540 TGCCAATCGACTGAAAATGGTATT 59.295 37.500 0.00 0.00 32.17 1.89
831 935 4.096382 GTGCCAATCGACTGAAAATGGTAT 59.904 41.667 0.00 0.00 32.17 2.73
832 936 3.438781 GTGCCAATCGACTGAAAATGGTA 59.561 43.478 0.00 0.00 32.17 3.25
833 937 2.228822 GTGCCAATCGACTGAAAATGGT 59.771 45.455 0.00 0.00 32.17 3.55
834 938 2.415893 GGTGCCAATCGACTGAAAATGG 60.416 50.000 0.00 0.00 32.51 3.16
835 939 2.489329 AGGTGCCAATCGACTGAAAATG 59.511 45.455 0.00 0.00 0.00 2.32
836 940 2.489329 CAGGTGCCAATCGACTGAAAAT 59.511 45.455 0.00 0.00 0.00 1.82
837 941 1.879380 CAGGTGCCAATCGACTGAAAA 59.121 47.619 0.00 0.00 0.00 2.29
838 942 1.522668 CAGGTGCCAATCGACTGAAA 58.477 50.000 0.00 0.00 0.00 2.69
839 943 0.321564 CCAGGTGCCAATCGACTGAA 60.322 55.000 0.00 0.00 0.00 3.02
840 944 1.296392 CCAGGTGCCAATCGACTGA 59.704 57.895 0.00 0.00 0.00 3.41
841 945 2.401766 GCCAGGTGCCAATCGACTG 61.402 63.158 0.00 0.00 0.00 3.51
842 946 2.045926 GCCAGGTGCCAATCGACT 60.046 61.111 0.00 0.00 0.00 4.18
843 947 3.499737 CGCCAGGTGCCAATCGAC 61.500 66.667 0.00 0.00 36.24 4.20
844 948 4.776322 CCGCCAGGTGCCAATCGA 62.776 66.667 0.00 0.00 36.24 3.59
854 958 4.410400 GGAGTTGGGACCGCCAGG 62.410 72.222 0.00 0.00 45.13 4.45
855 959 4.410400 GGGAGTTGGGACCGCCAG 62.410 72.222 0.00 0.00 35.15 4.85
857 961 4.717313 GTGGGAGTTGGGACCGCC 62.717 72.222 0.00 0.00 0.00 6.13
858 962 3.485346 TTGTGGGAGTTGGGACCGC 62.485 63.158 0.00 0.00 35.40 5.68
859 963 1.599797 GTTGTGGGAGTTGGGACCG 60.600 63.158 0.00 0.00 0.00 4.79
860 964 0.822121 GTGTTGTGGGAGTTGGGACC 60.822 60.000 0.00 0.00 0.00 4.46
861 965 0.106918 TGTGTTGTGGGAGTTGGGAC 60.107 55.000 0.00 0.00 0.00 4.46
862 966 0.182537 CTGTGTTGTGGGAGTTGGGA 59.817 55.000 0.00 0.00 0.00 4.37
863 967 1.455383 GCTGTGTTGTGGGAGTTGGG 61.455 60.000 0.00 0.00 0.00 4.12
864 968 0.466189 AGCTGTGTTGTGGGAGTTGG 60.466 55.000 0.00 0.00 0.00 3.77
865 969 0.947244 GAGCTGTGTTGTGGGAGTTG 59.053 55.000 0.00 0.00 0.00 3.16
866 970 0.532862 CGAGCTGTGTTGTGGGAGTT 60.533 55.000 0.00 0.00 0.00 3.01
867 971 1.069765 CGAGCTGTGTTGTGGGAGT 59.930 57.895 0.00 0.00 0.00 3.85
868 972 0.668706 CTCGAGCTGTGTTGTGGGAG 60.669 60.000 0.00 0.00 0.00 4.30
869 973 1.367471 CTCGAGCTGTGTTGTGGGA 59.633 57.895 0.00 0.00 0.00 4.37
870 974 2.320587 GCTCGAGCTGTGTTGTGGG 61.321 63.158 29.88 0.00 38.21 4.61
871 975 3.248029 GCTCGAGCTGTGTTGTGG 58.752 61.111 29.88 0.00 38.21 4.17
881 985 1.140804 GAGAAGGTGGAGCTCGAGC 59.859 63.158 30.01 30.01 42.49 5.03
882 986 0.455410 CAGAGAAGGTGGAGCTCGAG 59.545 60.000 8.45 8.45 33.98 4.04
883 987 0.967887 CCAGAGAAGGTGGAGCTCGA 60.968 60.000 7.83 0.00 37.23 4.04
884 988 0.967887 TCCAGAGAAGGTGGAGCTCG 60.968 60.000 7.83 0.00 39.28 5.03
885 989 2.983512 TCCAGAGAAGGTGGAGCTC 58.016 57.895 4.71 4.71 39.28 4.09
886 990 2.300458 CGATCCAGAGAAGGTGGAGCT 61.300 57.143 5.89 0.00 46.43 4.09
890 994 2.035704 CAGATCGATCCAGAGAAGGTGG 59.964 54.545 21.66 0.00 36.28 4.61
891 995 2.545532 GCAGATCGATCCAGAGAAGGTG 60.546 54.545 21.66 10.93 0.00 4.00
892 996 1.686052 GCAGATCGATCCAGAGAAGGT 59.314 52.381 21.66 0.00 0.00 3.50
893 997 1.685517 TGCAGATCGATCCAGAGAAGG 59.314 52.381 21.66 3.22 0.00 3.46
894 998 3.181477 ACTTGCAGATCGATCCAGAGAAG 60.181 47.826 21.66 18.77 0.00 2.85
895 999 2.762887 ACTTGCAGATCGATCCAGAGAA 59.237 45.455 21.66 10.01 0.00 2.87
906 1010 0.798776 CGGGTGTTGACTTGCAGATC 59.201 55.000 0.00 0.00 0.00 2.75
908 1012 0.249868 CTCGGGTGTTGACTTGCAGA 60.250 55.000 0.00 0.00 0.00 4.26
911 1015 0.249911 AGACTCGGGTGTTGACTTGC 60.250 55.000 0.00 0.00 0.00 4.01
925 1029 2.588027 GGACCTTGATCCGAAGACTC 57.412 55.000 0.00 0.00 0.00 3.36
935 1039 2.653557 GGTTTTGCCGGACCTTGAT 58.346 52.632 5.05 0.00 33.08 2.57
1008 1119 4.269523 ACGGCTTTCCCTGCTGCA 62.270 61.111 0.88 0.88 40.21 4.41
1011 1122 2.788191 CTTCGACGGCTTTCCCTGCT 62.788 60.000 0.00 0.00 0.00 4.24
1020 1131 4.070552 GCCTGGTCTTCGACGGCT 62.071 66.667 0.00 0.00 36.57 5.52
1034 1145 3.736224 CCCCACCAGCAGATGCCT 61.736 66.667 0.14 0.00 43.38 4.75
1046 1160 4.025401 CTCGCGTTGTTGCCCCAC 62.025 66.667 5.77 0.00 0.00 4.61
1051 1165 4.430423 CTCCGCTCGCGTTGTTGC 62.430 66.667 5.77 3.43 37.81 4.17
1539 1696 1.437986 CCCGTCCGAGAAGACATCC 59.562 63.158 0.00 0.00 36.52 3.51
1603 1760 2.633967 GCAGTGAGATCTCATGGAGGAT 59.366 50.000 27.51 6.34 42.18 3.24
1638 1795 0.246635 GAAGCTCCTTCGTGTAGCCA 59.753 55.000 0.00 0.00 36.92 4.75
1747 1905 7.082602 GCCAAATTCAGATCTACAATATGCTG 58.917 38.462 0.00 0.00 0.00 4.41
1748 1906 6.774170 TGCCAAATTCAGATCTACAATATGCT 59.226 34.615 0.00 0.00 0.00 3.79
1749 1907 6.973843 TGCCAAATTCAGATCTACAATATGC 58.026 36.000 0.00 2.27 0.00 3.14
1750 1908 9.976511 AAATGCCAAATTCAGATCTACAATATG 57.023 29.630 0.00 0.00 0.00 1.78
1751 1909 9.976511 CAAATGCCAAATTCAGATCTACAATAT 57.023 29.630 0.00 0.00 0.00 1.28
1752 1910 8.415553 CCAAATGCCAAATTCAGATCTACAATA 58.584 33.333 0.00 0.00 0.00 1.90
1753 1911 7.270047 CCAAATGCCAAATTCAGATCTACAAT 58.730 34.615 0.00 0.00 0.00 2.71
1754 1912 6.632909 CCAAATGCCAAATTCAGATCTACAA 58.367 36.000 0.00 0.00 0.00 2.41
1755 1913 5.394443 GCCAAATGCCAAATTCAGATCTACA 60.394 40.000 0.00 0.00 0.00 2.74
1756 1914 5.045872 GCCAAATGCCAAATTCAGATCTAC 58.954 41.667 0.00 0.00 0.00 2.59
1787 1945 4.687901 TCCAGTTCATCAACTCTGACAA 57.312 40.909 0.00 0.00 41.24 3.18
1830 1988 2.632996 TGGAGAATCGACAAGAACCTGT 59.367 45.455 0.00 0.00 34.37 4.00
2050 2208 2.591429 CGCTTCGCCATGGCCATA 60.591 61.111 30.79 13.97 37.98 2.74
2089 2247 0.669318 TGGTGAATCCGTCTGCGAAC 60.669 55.000 0.00 0.00 41.33 3.95
2230 2388 1.674057 CTTGGCGAGAACCACCTCT 59.326 57.895 0.00 0.00 40.19 3.69
2308 2466 4.504916 CTCTGCGTCCCTGAGCCG 62.505 72.222 0.00 0.00 33.56 5.52
2371 2529 4.794439 TCGATGCAGGACACGGCG 62.794 66.667 4.80 4.80 40.93 6.46
2567 2725 1.675720 AAGCTGGTGTTGTTGGCCAC 61.676 55.000 3.88 0.75 0.00 5.01
2609 2767 3.203412 CTCGTCGTCTCCCCCGAG 61.203 72.222 0.00 0.00 40.54 4.63
2663 2821 0.312416 GCCTCGATGTAGCTCGTGAT 59.688 55.000 0.00 0.00 39.62 3.06
2666 2824 0.382515 GAAGCCTCGATGTAGCTCGT 59.617 55.000 0.00 0.00 39.62 4.18
2669 2827 0.749649 CAGGAAGCCTCGATGTAGCT 59.250 55.000 0.00 0.00 38.88 3.32
2675 2833 3.854669 CGCCCAGGAAGCCTCGAT 61.855 66.667 0.00 0.00 0.00 3.59
2853 3011 4.241999 GCCACGCGCCATAAGCAG 62.242 66.667 5.73 0.00 44.04 4.24
2873 3031 1.377725 CAAGCTTGGGGTGCTCGAT 60.378 57.895 19.14 0.00 40.22 3.59
2875 3033 3.058160 CCAAGCTTGGGGTGCTCG 61.058 66.667 34.08 9.02 44.70 5.03
2938 3096 4.319177 CGTCCTCTCCTTCAAACAATTCT 58.681 43.478 0.00 0.00 0.00 2.40
2941 3099 2.224523 TGCGTCCTCTCCTTCAAACAAT 60.225 45.455 0.00 0.00 0.00 2.71
3010 3168 1.471676 GGAACACATACCTCCGCAGAG 60.472 57.143 0.00 0.00 40.09 3.35
3017 3175 1.153229 GCCGGGGAACACATACCTC 60.153 63.158 2.18 0.00 0.00 3.85
3032 3190 2.521958 ATCGAACACCCAAGAGGCCG 62.522 60.000 0.00 0.00 40.58 6.13
3033 3191 0.322546 AATCGAACACCCAAGAGGCC 60.323 55.000 0.00 0.00 40.58 5.19
3040 3198 1.811965 CTGATTGCAATCGAACACCCA 59.188 47.619 29.23 12.73 38.26 4.51
3041 3199 2.083774 TCTGATTGCAATCGAACACCC 58.916 47.619 29.23 8.92 38.26 4.61
3042 3200 2.096496 CCTCTGATTGCAATCGAACACC 59.904 50.000 29.23 9.61 38.26 4.16
3081 3239 8.347004 TCTGCAAATTCATGACCTATTTGTAA 57.653 30.769 22.97 15.14 39.97 2.41
3114 3272 3.461061 TGATTCGTCATTGAGATCCTGC 58.539 45.455 0.00 0.00 0.00 4.85
3120 3278 8.362639 TGATTATCTGATGATTCGTCATTGAGA 58.637 33.333 8.97 3.92 34.32 3.27
3129 3287 6.152379 TCCGAGTTGATTATCTGATGATTCG 58.848 40.000 0.00 4.16 34.32 3.34
3155 3313 1.211456 CCTCCTCCCAAGATCTGCTT 58.789 55.000 0.00 0.00 37.29 3.91
3295 3453 1.377725 CTTGCGGATGGTGAAGCCT 60.378 57.895 0.00 0.00 38.35 4.58
3320 3478 3.188786 GCTGTCCATGGCGTCGAC 61.189 66.667 6.96 5.18 0.00 4.20
3373 3531 2.181021 GGTGACACTAGCCGGACG 59.819 66.667 5.05 0.00 0.00 4.79
3374 3532 2.577593 GGGTGACACTAGCCGGAC 59.422 66.667 5.05 0.00 0.00 4.79
3391 3549 0.390603 TCACGGGATAAACAGGTGCG 60.391 55.000 0.00 0.00 0.00 5.34
3392 3550 1.467342 GTTCACGGGATAAACAGGTGC 59.533 52.381 0.00 0.00 0.00 5.01
3592 3750 0.743701 CCTGCTGCCTGTCACAGATC 60.744 60.000 6.30 0.00 37.32 2.75
3650 3808 3.245479 GGGTTTGGGAAAGAGTTGGGATA 60.245 47.826 0.00 0.00 0.00 2.59
3657 3815 1.704641 GCTTGGGTTTGGGAAAGAGT 58.295 50.000 0.00 0.00 0.00 3.24
3700 3858 3.599285 GAATGGCGGTGGTGACGGA 62.599 63.158 0.00 0.00 0.00 4.69
3803 3961 4.468689 GGAGTAGGTGTGGCGGCC 62.469 72.222 13.32 13.32 0.00 6.13
3804 3962 2.854187 GAAGGAGTAGGTGTGGCGGC 62.854 65.000 0.00 0.00 0.00 6.53
3807 3965 0.108756 GTCGAAGGAGTAGGTGTGGC 60.109 60.000 0.00 0.00 0.00 5.01
3834 3995 1.591703 TGAGACGTCCACTCATGGC 59.408 57.895 13.01 0.00 46.80 4.40
3846 4007 2.202797 CCCAGTCGCCATGAGACG 60.203 66.667 13.17 6.14 42.97 4.18
3886 4047 1.154093 CAGCTCGCCGTCGAAGTAA 60.154 57.895 0.00 0.00 44.98 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.