Multiple sequence alignment - TraesCS7B01G115400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G115400 chr7B 100.000 4895 0 0 789 5683 134006422 134011316 0.000000e+00 9040.0
1 TraesCS7B01G115400 chr7B 100.000 458 0 0 1 458 134005634 134006091 0.000000e+00 846.0
2 TraesCS7B01G115400 chr7B 89.787 235 23 1 1 235 729604571 729604804 3.330000e-77 300.0
3 TraesCS7B01G115400 chr7A 94.263 4201 173 26 1300 5466 170878958 170883124 0.000000e+00 6360.0
4 TraesCS7B01G115400 chr7A 93.761 545 30 4 789 1330 170878414 170878957 0.000000e+00 815.0
5 TraesCS7B01G115400 chr7A 88.966 145 10 5 318 458 170878222 170878364 2.100000e-39 174.0
6 TraesCS7B01G115400 chr7D 95.442 2852 91 16 2617 5466 168571162 168573976 0.000000e+00 4510.0
7 TraesCS7B01G115400 chr7D 93.408 1866 84 14 789 2625 168569010 168570865 0.000000e+00 2728.0
8 TraesCS7B01G115400 chr7D 89.610 231 24 0 1 231 571474621 571474391 1.550000e-75 294.0
9 TraesCS7B01G115400 chr7D 91.608 143 6 5 314 452 168568814 168568954 5.810000e-45 193.0
10 TraesCS7B01G115400 chr7D 97.778 45 1 0 5469 5513 362362656 362362700 1.700000e-10 78.7
11 TraesCS7B01G115400 chr4A 91.915 235 19 0 1 235 743366150 743366384 4.240000e-86 329.0
12 TraesCS7B01G115400 chr4B 91.667 228 19 0 8 235 541445573 541445346 3.300000e-82 316.0
13 TraesCS7B01G115400 chr2B 90.870 230 21 0 1 230 456031995 456031766 5.530000e-80 309.0
14 TraesCS7B01G115400 chr2B 90.476 231 18 1 1 231 46496370 46496596 9.250000e-78 302.0
15 TraesCS7B01G115400 chr6B 89.610 231 24 0 1 231 113850474 113850244 1.550000e-75 294.0
16 TraesCS7B01G115400 chr6B 89.362 235 24 1 1 235 313315486 313315719 1.550000e-75 294.0
17 TraesCS7B01G115400 chr6B 85.648 216 29 2 5466 5680 419768645 419768431 5.730000e-55 226.0
18 TraesCS7B01G115400 chr2D 88.983 236 23 3 1 235 618295282 618295049 7.200000e-74 289.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G115400 chr7B 134005634 134011316 5682 False 4943.000000 9040 100.000 1 5683 2 chr7B.!!$F2 5682
1 TraesCS7B01G115400 chr7A 170878222 170883124 4902 False 2449.666667 6360 92.330 318 5466 3 chr7A.!!$F1 5148
2 TraesCS7B01G115400 chr7D 168568814 168573976 5162 False 2477.000000 4510 93.486 314 5466 3 chr7D.!!$F2 5152

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.034670 GCCCTGGAGAAACTGCTGAT 60.035 55.0 0.00 0.00 0.00 2.90 F
290 291 0.037882 TTTGGAGCACTCAGAGAGCG 60.038 55.0 13.49 0.00 36.90 5.03 F
344 346 0.045008 TAGGCCCATGGGTTCACCTA 59.955 55.0 31.58 27.24 41.11 3.08 F
1259 1274 0.683828 ATGGATGCACGATTTGGGCA 60.684 50.0 2.64 2.64 42.43 5.36 F
2031 2096 0.181114 AGAAACCAGCTGTGCAGTCA 59.819 50.0 13.81 0.00 0.00 3.41 F
3473 3854 0.240411 CTCTGCTCTGCTTTGTTGCC 59.760 55.0 0.00 0.00 0.00 4.52 F
3930 4311 0.883370 AACCAACCGCGGAAGAAGAC 60.883 55.0 35.90 0.00 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1230 1245 0.456653 GTGCATCCATTGAACCGCAC 60.457 55.000 0.00 0.00 37.76 5.34 R
1464 1528 0.731514 CTGCCAGACAATTGCAAGCG 60.732 55.000 4.94 0.23 34.06 4.68 R
2003 2068 0.764890 AGCTGGTTTCTGGCTACACA 59.235 50.000 0.00 0.00 34.31 3.72 R
2131 2196 1.142667 TGGAATCTGACAAGCACACCA 59.857 47.619 0.00 0.00 0.00 4.17 R
3612 3993 0.035317 TCTTGTGCCAGCGAACATCT 59.965 50.000 0.00 0.00 0.00 2.90 R
4672 5053 0.109272 GAGACGACGTCAATCAGCCA 60.109 55.000 28.31 0.00 34.60 4.75 R
5558 5961 0.037303 ATAAGGATGGGGATGCGCTG 59.963 55.000 9.73 0.00 0.00 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.843240 GCAACGCGGCTTCTCGAG 61.843 66.667 12.47 5.93 36.10 4.04
25 26 2.876645 GCTTCTCGAGCGTGGTCG 60.877 66.667 14.73 14.73 42.46 4.79
80 81 3.661648 GGCCTGGCCCTGGAGAAA 61.662 66.667 27.77 0.00 44.06 2.52
81 82 2.361737 GCCTGGCCCTGGAGAAAC 60.362 66.667 11.43 0.00 0.00 2.78
82 83 2.911926 GCCTGGCCCTGGAGAAACT 61.912 63.158 11.43 0.00 0.00 2.66
83 84 1.001641 CCTGGCCCTGGAGAAACTG 60.002 63.158 0.00 0.00 0.00 3.16
84 85 1.676967 CTGGCCCTGGAGAAACTGC 60.677 63.158 0.00 0.00 0.00 4.40
85 86 2.134630 CTGGCCCTGGAGAAACTGCT 62.135 60.000 0.00 0.00 0.00 4.24
86 87 1.676967 GGCCCTGGAGAAACTGCTG 60.677 63.158 0.00 0.00 0.00 4.41
87 88 1.376466 GCCCTGGAGAAACTGCTGA 59.624 57.895 0.00 0.00 0.00 4.26
88 89 0.034670 GCCCTGGAGAAACTGCTGAT 60.035 55.000 0.00 0.00 0.00 2.90
89 90 1.615384 GCCCTGGAGAAACTGCTGATT 60.615 52.381 0.00 0.00 0.00 2.57
90 91 2.363683 CCCTGGAGAAACTGCTGATTC 58.636 52.381 5.60 5.60 0.00 2.52
91 92 2.005451 CCTGGAGAAACTGCTGATTCG 58.995 52.381 7.74 0.00 31.40 3.34
92 93 2.005451 CTGGAGAAACTGCTGATTCGG 58.995 52.381 7.74 0.00 31.40 4.30
93 94 1.339055 TGGAGAAACTGCTGATTCGGG 60.339 52.381 7.74 0.00 31.40 5.14
94 95 0.729690 GAGAAACTGCTGATTCGGGC 59.270 55.000 7.74 0.00 31.40 6.13
95 96 1.021390 AGAAACTGCTGATTCGGGCG 61.021 55.000 7.74 0.00 31.40 6.13
96 97 1.298859 GAAACTGCTGATTCGGGCGT 61.299 55.000 0.00 0.00 0.00 5.68
97 98 0.889186 AAACTGCTGATTCGGGCGTT 60.889 50.000 0.00 1.59 0.00 4.84
98 99 1.298859 AACTGCTGATTCGGGCGTTC 61.299 55.000 0.00 0.00 0.00 3.95
99 100 2.435938 TGCTGATTCGGGCGTTCC 60.436 61.111 0.00 0.00 0.00 3.62
100 101 2.125106 GCTGATTCGGGCGTTCCT 60.125 61.111 0.00 0.00 0.00 3.36
101 102 1.143183 GCTGATTCGGGCGTTCCTA 59.857 57.895 0.00 0.00 0.00 2.94
102 103 0.876342 GCTGATTCGGGCGTTCCTAG 60.876 60.000 0.00 0.00 0.00 3.02
103 104 0.249489 CTGATTCGGGCGTTCCTAGG 60.249 60.000 0.82 0.82 0.00 3.02
104 105 1.069258 GATTCGGGCGTTCCTAGGG 59.931 63.158 9.46 0.00 0.00 3.53
105 106 1.382146 ATTCGGGCGTTCCTAGGGA 60.382 57.895 9.46 0.00 0.00 4.20
106 107 1.400530 ATTCGGGCGTTCCTAGGGAG 61.401 60.000 9.46 1.69 31.21 4.30
107 108 4.222847 CGGGCGTTCCTAGGGAGC 62.223 72.222 9.46 11.85 31.21 4.70
108 109 3.862991 GGGCGTTCCTAGGGAGCC 61.863 72.222 25.27 25.27 40.85 4.70
109 110 3.081409 GGCGTTCCTAGGGAGCCA 61.081 66.667 27.07 1.03 41.13 4.75
110 111 2.501610 GCGTTCCTAGGGAGCCAG 59.498 66.667 9.46 0.00 31.21 4.85
111 112 3.095347 GCGTTCCTAGGGAGCCAGG 62.095 68.421 9.46 0.00 31.21 4.45
112 113 2.911928 GTTCCTAGGGAGCCAGGC 59.088 66.667 9.46 1.84 31.21 4.85
113 114 2.366972 TTCCTAGGGAGCCAGGCC 60.367 66.667 8.22 0.00 31.21 5.19
114 115 4.499116 TCCTAGGGAGCCAGGCCC 62.499 72.222 8.22 9.24 46.40 5.80
121 122 4.106925 GAGCCAGGCCCAGGAGTG 62.107 72.222 15.78 0.00 0.00 3.51
124 125 3.655211 CCAGGCCCAGGAGTGCTT 61.655 66.667 5.93 0.00 0.00 3.91
125 126 2.437897 CAGGCCCAGGAGTGCTTT 59.562 61.111 0.00 0.00 0.00 3.51
126 127 1.685224 CAGGCCCAGGAGTGCTTTA 59.315 57.895 0.00 0.00 0.00 1.85
127 128 0.038166 CAGGCCCAGGAGTGCTTTAA 59.962 55.000 0.00 0.00 0.00 1.52
128 129 0.329596 AGGCCCAGGAGTGCTTTAAG 59.670 55.000 0.00 0.00 0.00 1.85
129 130 0.681243 GGCCCAGGAGTGCTTTAAGG 60.681 60.000 0.00 0.00 0.00 2.69
130 131 0.038310 GCCCAGGAGTGCTTTAAGGT 59.962 55.000 0.00 0.00 0.00 3.50
131 132 1.280998 GCCCAGGAGTGCTTTAAGGTA 59.719 52.381 0.00 0.00 0.00 3.08
132 133 2.940083 GCCCAGGAGTGCTTTAAGGTAC 60.940 54.545 0.00 0.00 0.00 3.34
133 134 2.618053 CCAGGAGTGCTTTAAGGTACG 58.382 52.381 0.31 0.00 0.00 3.67
134 135 2.028385 CCAGGAGTGCTTTAAGGTACGT 60.028 50.000 0.00 0.00 0.00 3.57
135 136 2.993899 CAGGAGTGCTTTAAGGTACGTG 59.006 50.000 0.00 0.00 0.00 4.49
136 137 1.730612 GGAGTGCTTTAAGGTACGTGC 59.269 52.381 0.00 0.00 0.00 5.34
137 138 1.730612 GAGTGCTTTAAGGTACGTGCC 59.269 52.381 15.72 15.72 0.00 5.01
138 139 1.071071 AGTGCTTTAAGGTACGTGCCA 59.929 47.619 25.19 1.44 0.00 4.92
139 140 2.081462 GTGCTTTAAGGTACGTGCCAT 58.919 47.619 25.19 15.82 0.00 4.40
140 141 2.080693 TGCTTTAAGGTACGTGCCATG 58.919 47.619 25.19 10.19 0.00 3.66
141 142 1.202143 GCTTTAAGGTACGTGCCATGC 60.202 52.381 25.19 15.70 0.00 4.06
142 143 1.062002 CTTTAAGGTACGTGCCATGCG 59.938 52.381 25.19 5.13 0.00 4.73
143 144 0.741574 TTAAGGTACGTGCCATGCGG 60.742 55.000 25.19 0.00 0.00 5.69
144 145 2.581208 TAAGGTACGTGCCATGCGGG 62.581 60.000 25.19 0.00 40.85 6.13
154 155 3.803082 CATGCGGGCCGAACAGTG 61.803 66.667 33.44 11.54 0.00 3.66
155 156 4.015406 ATGCGGGCCGAACAGTGA 62.015 61.111 33.44 3.33 0.00 3.41
156 157 3.545124 ATGCGGGCCGAACAGTGAA 62.545 57.895 33.44 3.71 0.00 3.18
157 158 2.975799 GCGGGCCGAACAGTGAAA 60.976 61.111 33.44 0.00 0.00 2.69
158 159 2.966309 GCGGGCCGAACAGTGAAAG 61.966 63.158 33.44 0.00 0.00 2.62
159 160 2.954611 GGGCCGAACAGTGAAAGC 59.045 61.111 0.00 0.00 0.00 3.51
160 161 1.896660 GGGCCGAACAGTGAAAGCA 60.897 57.895 0.00 0.00 0.00 3.91
161 162 1.452145 GGGCCGAACAGTGAAAGCAA 61.452 55.000 0.00 0.00 0.00 3.91
162 163 0.040067 GGCCGAACAGTGAAAGCAAG 60.040 55.000 0.00 0.00 0.00 4.01
163 164 0.661483 GCCGAACAGTGAAAGCAAGC 60.661 55.000 0.00 0.00 0.00 4.01
164 165 0.662619 CCGAACAGTGAAAGCAAGCA 59.337 50.000 0.00 0.00 0.00 3.91
165 166 1.065401 CCGAACAGTGAAAGCAAGCAA 59.935 47.619 0.00 0.00 0.00 3.91
166 167 2.111756 CGAACAGTGAAAGCAAGCAAC 58.888 47.619 0.00 0.00 0.00 4.17
167 168 2.463876 GAACAGTGAAAGCAAGCAACC 58.536 47.619 0.00 0.00 0.00 3.77
168 169 0.381801 ACAGTGAAAGCAAGCAACCG 59.618 50.000 0.00 0.00 0.00 4.44
169 170 0.662619 CAGTGAAAGCAAGCAACCGA 59.337 50.000 0.00 0.00 0.00 4.69
170 171 1.065401 CAGTGAAAGCAAGCAACCGAA 59.935 47.619 0.00 0.00 0.00 4.30
171 172 1.065551 AGTGAAAGCAAGCAACCGAAC 59.934 47.619 0.00 0.00 0.00 3.95
172 173 1.098869 TGAAAGCAAGCAACCGAACA 58.901 45.000 0.00 0.00 0.00 3.18
173 174 1.065401 TGAAAGCAAGCAACCGAACAG 59.935 47.619 0.00 0.00 0.00 3.16
175 176 2.050077 GCAAGCAACCGAACAGGC 60.050 61.111 0.00 0.00 46.52 4.85
176 177 2.644992 CAAGCAACCGAACAGGCC 59.355 61.111 0.00 0.00 46.52 5.19
177 178 2.978010 AAGCAACCGAACAGGCCG 60.978 61.111 0.00 0.00 46.52 6.13
184 185 4.617875 CGAACAGGCCGGATTCTT 57.382 55.556 10.86 0.00 0.00 2.52
185 186 2.854522 CGAACAGGCCGGATTCTTT 58.145 52.632 10.86 0.00 0.00 2.52
186 187 0.727398 CGAACAGGCCGGATTCTTTC 59.273 55.000 10.86 1.21 0.00 2.62
187 188 1.095600 GAACAGGCCGGATTCTTTCC 58.904 55.000 10.86 0.00 41.59 3.13
194 195 3.573491 GGATTCTTTCCGCGCGGG 61.573 66.667 44.95 30.64 33.93 6.13
195 196 4.237809 GATTCTTTCCGCGCGGGC 62.238 66.667 44.95 22.58 34.94 6.13
211 212 2.757099 GCCTGGTTGGGCCTCATG 60.757 66.667 4.53 0.00 45.92 3.07
212 213 2.757099 CCTGGTTGGGCCTCATGC 60.757 66.667 4.53 0.00 38.35 4.06
213 214 2.036098 CTGGTTGGGCCTCATGCA 59.964 61.111 4.53 0.00 43.89 3.96
214 215 2.036098 TGGTTGGGCCTCATGCAG 59.964 61.111 4.53 0.00 43.89 4.41
215 216 2.757099 GGTTGGGCCTCATGCAGG 60.757 66.667 4.53 0.00 46.82 4.85
222 223 4.100479 CCTCATGCAGGCAACCAA 57.900 55.556 0.00 0.00 34.56 3.67
223 224 2.353858 CCTCATGCAGGCAACCAAA 58.646 52.632 0.00 0.00 34.56 3.28
224 225 0.037975 CCTCATGCAGGCAACCAAAC 60.038 55.000 0.00 0.00 34.56 2.93
225 226 0.675083 CTCATGCAGGCAACCAAACA 59.325 50.000 0.00 0.00 37.17 2.83
226 227 0.388659 TCATGCAGGCAACCAAACAC 59.611 50.000 0.00 0.00 37.17 3.32
227 228 0.940519 CATGCAGGCAACCAAACACG 60.941 55.000 0.00 0.00 37.17 4.49
228 229 2.658268 GCAGGCAACCAAACACGC 60.658 61.111 0.00 0.00 37.17 5.34
229 230 2.027460 CAGGCAACCAAACACGCC 59.973 61.111 0.00 0.00 45.23 5.68
230 231 3.223589 AGGCAACCAAACACGCCC 61.224 61.111 0.00 0.00 46.08 6.13
231 232 3.532155 GGCAACCAAACACGCCCA 61.532 61.111 0.00 0.00 38.67 5.36
232 233 2.733945 GCAACCAAACACGCCCAT 59.266 55.556 0.00 0.00 0.00 4.00
233 234 1.528292 GGCAACCAAACACGCCCATA 61.528 55.000 0.00 0.00 38.67 2.74
234 235 0.109319 GCAACCAAACACGCCCATAG 60.109 55.000 0.00 0.00 0.00 2.23
235 236 0.109319 CAACCAAACACGCCCATAGC 60.109 55.000 0.00 0.00 38.52 2.97
236 237 1.248101 AACCAAACACGCCCATAGCC 61.248 55.000 0.00 0.00 38.78 3.93
237 238 1.378514 CCAAACACGCCCATAGCCT 60.379 57.895 0.00 0.00 38.78 4.58
238 239 0.965363 CCAAACACGCCCATAGCCTT 60.965 55.000 0.00 0.00 38.78 4.35
239 240 0.887933 CAAACACGCCCATAGCCTTT 59.112 50.000 0.00 0.00 38.78 3.11
240 241 0.887933 AAACACGCCCATAGCCTTTG 59.112 50.000 0.00 0.00 38.78 2.77
241 242 1.595093 AACACGCCCATAGCCTTTGC 61.595 55.000 0.00 0.00 38.78 3.68
243 244 4.256090 CGCCCATAGCCTTTGCGC 62.256 66.667 0.00 0.00 44.33 6.09
244 245 2.830370 GCCCATAGCCTTTGCGCT 60.830 61.111 9.73 0.00 44.33 5.92
245 246 3.113745 CCCATAGCCTTTGCGCTG 58.886 61.111 9.73 0.00 44.33 5.18
246 247 1.750399 CCCATAGCCTTTGCGCTGT 60.750 57.895 9.73 0.00 44.33 4.40
247 248 1.315257 CCCATAGCCTTTGCGCTGTT 61.315 55.000 9.73 0.00 44.33 3.16
248 249 0.179156 CCATAGCCTTTGCGCTGTTG 60.179 55.000 9.73 0.00 44.33 3.33
249 250 0.179156 CATAGCCTTTGCGCTGTTGG 60.179 55.000 9.73 6.95 44.33 3.77
250 251 0.322456 ATAGCCTTTGCGCTGTTGGA 60.322 50.000 9.73 0.00 44.33 3.53
251 252 1.234615 TAGCCTTTGCGCTGTTGGAC 61.235 55.000 9.73 2.80 44.33 4.02
252 253 2.252260 CCTTTGCGCTGTTGGACG 59.748 61.111 9.73 0.00 0.00 4.79
258 259 2.049156 CGCTGTTGGACGCAGAGA 60.049 61.111 0.00 0.00 36.15 3.10
259 260 2.091112 CGCTGTTGGACGCAGAGAG 61.091 63.158 0.00 0.00 36.15 3.20
260 261 2.386660 GCTGTTGGACGCAGAGAGC 61.387 63.158 0.00 0.00 36.12 4.09
286 287 4.907879 AAAAAGTTTGGAGCACTCAGAG 57.092 40.909 0.00 0.00 0.00 3.35
287 288 3.845781 AAAGTTTGGAGCACTCAGAGA 57.154 42.857 3.79 0.00 0.00 3.10
288 289 3.399440 AAGTTTGGAGCACTCAGAGAG 57.601 47.619 3.79 0.00 35.52 3.20
289 290 1.001860 AGTTTGGAGCACTCAGAGAGC 59.998 52.381 11.67 11.67 32.04 4.09
290 291 0.037882 TTTGGAGCACTCAGAGAGCG 60.038 55.000 13.49 0.00 36.90 5.03
291 292 1.181741 TTGGAGCACTCAGAGAGCGT 61.182 55.000 13.49 3.32 36.90 5.07
292 293 1.138671 GGAGCACTCAGAGAGCGTC 59.861 63.158 13.49 11.10 36.90 5.19
293 294 1.590610 GGAGCACTCAGAGAGCGTCA 61.591 60.000 13.49 0.00 36.90 4.35
294 295 0.455410 GAGCACTCAGAGAGCGTCAT 59.545 55.000 13.49 0.00 36.90 3.06
295 296 1.673400 GAGCACTCAGAGAGCGTCATA 59.327 52.381 13.49 0.00 36.90 2.15
296 297 2.293122 GAGCACTCAGAGAGCGTCATAT 59.707 50.000 13.49 0.00 36.90 1.78
297 298 3.481453 AGCACTCAGAGAGCGTCATATA 58.519 45.455 13.49 0.00 36.90 0.86
298 299 3.501828 AGCACTCAGAGAGCGTCATATAG 59.498 47.826 13.49 0.00 36.90 1.31
299 300 3.500299 GCACTCAGAGAGCGTCATATAGA 59.500 47.826 3.79 0.00 32.04 1.98
300 301 4.023622 GCACTCAGAGAGCGTCATATAGAA 60.024 45.833 3.79 0.00 32.04 2.10
301 302 5.506483 GCACTCAGAGAGCGTCATATAGAAA 60.506 44.000 3.79 0.00 32.04 2.52
302 303 6.142139 CACTCAGAGAGCGTCATATAGAAAG 58.858 44.000 3.79 0.00 32.04 2.62
303 304 6.017523 CACTCAGAGAGCGTCATATAGAAAGA 60.018 42.308 3.79 0.00 32.04 2.52
304 305 6.714810 ACTCAGAGAGCGTCATATAGAAAGAT 59.285 38.462 3.79 0.00 32.04 2.40
305 306 7.230510 ACTCAGAGAGCGTCATATAGAAAGATT 59.769 37.037 3.79 0.00 32.04 2.40
306 307 7.946207 TCAGAGAGCGTCATATAGAAAGATTT 58.054 34.615 0.00 0.00 0.00 2.17
307 308 8.417106 TCAGAGAGCGTCATATAGAAAGATTTT 58.583 33.333 0.00 0.00 0.00 1.82
308 309 9.039870 CAGAGAGCGTCATATAGAAAGATTTTT 57.960 33.333 0.00 0.00 0.00 1.94
343 345 0.627469 ATAGGCCCATGGGTTCACCT 60.627 55.000 31.58 28.26 41.11 4.00
344 346 0.045008 TAGGCCCATGGGTTCACCTA 59.955 55.000 31.58 27.24 41.11 3.08
345 347 1.076995 GGCCCATGGGTTCACCTAC 60.077 63.158 31.58 12.26 41.11 3.18
363 368 3.136443 CCTACACTCATAGCCCATCCAAA 59.864 47.826 0.00 0.00 0.00 3.28
364 369 3.004752 ACACTCATAGCCCATCCAAAC 57.995 47.619 0.00 0.00 0.00 2.93
366 371 1.215423 ACTCATAGCCCATCCAAACCC 59.785 52.381 0.00 0.00 0.00 4.11
367 372 1.215173 CTCATAGCCCATCCAAACCCA 59.785 52.381 0.00 0.00 0.00 4.51
401 406 2.342279 CCGAGCAACCGACTTGGA 59.658 61.111 0.00 0.00 40.69 3.53
403 408 1.300620 CGAGCAACCGACTTGGACA 60.301 57.895 0.00 0.00 42.00 4.02
443 448 2.549754 GCACAGTAACACAGTCAAGCAT 59.450 45.455 0.00 0.00 0.00 3.79
809 814 2.202570 CACCATCGGACGGACGAC 60.203 66.667 0.00 0.00 46.64 4.34
812 817 2.713770 CATCGGACGGACGACGAT 59.286 61.111 17.70 17.70 46.64 3.73
814 819 2.879070 ATCGGACGGACGACGATCG 61.879 63.158 14.88 14.88 46.64 3.69
871 877 1.799917 GCAGTAGTATACCGCGTGCAA 60.800 52.381 4.92 0.00 44.47 4.08
932 945 2.687805 CCGCTTCGACTCCAGACGA 61.688 63.158 0.00 0.00 40.06 4.20
1226 1241 2.563179 CGATATCCCCCTTCACCACTAG 59.437 54.545 0.00 0.00 0.00 2.57
1230 1245 1.702957 TCCCCCTTCACCACTAGTTTG 59.297 52.381 0.00 0.00 0.00 2.93
1259 1274 0.683828 ATGGATGCACGATTTGGGCA 60.684 50.000 2.64 2.64 42.43 5.36
1291 1306 7.291416 AGGGTGGGATTTTGTACAGTTAAAAAT 59.709 33.333 2.79 2.79 36.47 1.82
1308 1323 9.793259 AGTTAAAAATGATCACTCTGTTAAGGA 57.207 29.630 0.00 0.00 0.00 3.36
1378 1442 0.811616 ATCACGGCTCGATTCTTGCC 60.812 55.000 2.62 2.62 42.94 4.52
1418 1482 0.895100 GGATCAGTTTGGGTGCTGCA 60.895 55.000 0.00 0.00 33.09 4.41
1464 1528 5.455525 CAGTGCTTTGTAGTTTTGCAGTTAC 59.544 40.000 0.00 0.00 35.44 2.50
1476 1540 1.336440 TGCAGTTACGCTTGCAATTGT 59.664 42.857 7.40 4.13 34.08 2.71
1478 1542 2.350772 GCAGTTACGCTTGCAATTGTCT 60.351 45.455 7.40 0.00 0.00 3.41
1495 1559 1.996191 GTCTGGCAGAAAGATGACGTC 59.004 52.381 20.62 9.11 0.00 4.34
1524 1588 3.189606 TGGTTATGGTTGAGAGGGACAT 58.810 45.455 0.00 0.00 0.00 3.06
1570 1634 5.674569 GCACTATGTATGCACTTTGTCCTTG 60.675 44.000 0.00 0.00 42.88 3.61
1583 1647 6.760770 CACTTTGTCCTTGGCAATTAAAGAAA 59.239 34.615 21.58 10.64 0.00 2.52
1676 1740 8.377681 TGTTCGATAGCAATTAAAGAACTTACG 58.622 33.333 6.91 0.00 37.82 3.18
1685 1749 7.166804 GCAATTAAAGAACTTACGCTTTGTTCA 59.833 33.333 11.69 0.00 41.56 3.18
1696 1760 4.158384 ACGCTTTGTTCAATAGCAATTCG 58.842 39.130 14.61 0.00 34.62 3.34
1723 1788 4.583086 TTTTTGACCCCGGGTGAC 57.417 55.556 21.85 11.91 35.25 3.67
1729 1794 0.763604 TGACCCCGGGTGACTGTTTA 60.764 55.000 21.85 0.22 35.25 2.01
1732 1797 1.426215 ACCCCGGGTGACTGTTTATTT 59.574 47.619 21.85 0.00 32.98 1.40
1736 1801 4.523558 CCCCGGGTGACTGTTTATTTAAAA 59.476 41.667 21.85 0.00 33.66 1.52
1768 1833 2.337583 AGTTCATTCATCGTGTCACCG 58.662 47.619 0.00 0.00 0.00 4.94
1789 1854 1.278172 CGACTCTGCTGTTGTGTCCG 61.278 60.000 0.00 0.00 0.00 4.79
1813 1878 5.047377 GTCTTAAACTTTTGGATGGCCATCA 60.047 40.000 39.50 25.77 45.46 3.07
1866 1931 7.298507 TCCAACGTTTTCTTCTATTTATCCG 57.701 36.000 0.00 0.00 0.00 4.18
1879 1944 8.565896 TTCTATTTATCCGATTAGCATTGCAT 57.434 30.769 11.91 0.00 0.00 3.96
1926 1991 9.624373 TGTTATTGGTTGTTAGTTTTACCAGTA 57.376 29.630 0.00 0.00 41.35 2.74
1942 2007 4.771114 CCAGTATCATGGTTCCTTGGTA 57.229 45.455 0.00 0.29 35.47 3.25
2003 2068 6.092748 CAGCGCTTTAATTTGGATTTACACT 58.907 36.000 7.50 0.00 0.00 3.55
2004 2069 6.033831 CAGCGCTTTAATTTGGATTTACACTG 59.966 38.462 7.50 0.00 0.00 3.66
2005 2070 5.861787 GCGCTTTAATTTGGATTTACACTGT 59.138 36.000 0.00 0.00 0.00 3.55
2022 2087 0.764890 TGTGTAGCCAGAAACCAGCT 59.235 50.000 0.00 0.00 40.66 4.24
2031 2096 0.181114 AGAAACCAGCTGTGCAGTCA 59.819 50.000 13.81 0.00 0.00 3.41
2083 2148 8.554528 AGATGCTTGATCAATATTAACACGAAG 58.445 33.333 8.96 0.00 32.86 3.79
2119 2184 8.660435 AGGAACTATGCATTAGTGGTACATATT 58.340 33.333 3.54 0.00 40.37 1.28
2120 2185 9.284968 GGAACTATGCATTAGTGGTACATATTT 57.715 33.333 3.54 0.00 44.52 1.40
2156 2221 4.217118 GTGTGCTTGTCAGATTCCAAATCT 59.783 41.667 0.00 0.00 0.00 2.40
2189 2254 3.703001 ACCTGTACAAGATTGACTGGG 57.297 47.619 17.07 0.00 34.68 4.45
2216 2288 9.768215 TCTGTTTAATGAAATTATCCCCTTTCT 57.232 29.630 0.00 0.00 38.83 2.52
2322 2395 3.586470 TGGAGTTGGGAGCAACTTTTA 57.414 42.857 0.00 0.00 44.53 1.52
2489 2562 4.481112 GCCCGAATTGCAGCCACG 62.481 66.667 0.00 0.00 0.00 4.94
2575 2648 5.221106 GCTGTGGTGCATGTGTATATCATTT 60.221 40.000 0.00 0.00 0.00 2.32
2611 2684 3.879295 AGTATGGTTGAATGGCTGATTCG 59.121 43.478 5.04 0.00 43.22 3.34
2621 2694 5.588246 TGAATGGCTGATTCGTGCTTATTTA 59.412 36.000 5.04 0.01 43.22 1.40
2743 3123 5.505181 TCACTTCTTCCTAAAGCTGGAAT 57.495 39.130 4.58 0.00 42.03 3.01
2744 3124 5.880901 TCACTTCTTCCTAAAGCTGGAATT 58.119 37.500 4.58 0.00 42.03 2.17
2997 3377 0.895530 TGATCCGTCTGACCAGGAAC 59.104 55.000 8.24 6.75 37.62 3.62
3035 3415 1.528161 GCAAAACATGACAAAGCAGGC 59.472 47.619 0.00 0.00 0.00 4.85
3058 3438 0.734889 CAACCTCACCCATTCATCGC 59.265 55.000 0.00 0.00 0.00 4.58
3145 3525 5.416013 CAGGTTCCCCTCAGTTTAAATCTTC 59.584 44.000 0.00 0.00 39.89 2.87
3214 3594 1.482748 AACCCAAGGCCCAGCATTTG 61.483 55.000 0.00 0.00 27.16 2.32
3258 3638 5.885881 TCGGTGTTGGCAATAACATTATTC 58.114 37.500 12.62 0.00 42.02 1.75
3352 3732 4.679372 GCATCTCTAGACTGGTTCAGTTCC 60.679 50.000 1.90 0.00 45.44 3.62
3386 3767 2.171870 TCAAACGGGGACTTCACTTTCT 59.828 45.455 0.00 0.00 0.00 2.52
3427 3808 7.403312 TTTTATAGCTTTGGCAATAGAAGCA 57.597 32.000 20.27 9.36 46.17 3.91
3436 3817 3.258872 TGGCAATAGAAGCATGCTTTTGT 59.741 39.130 32.36 22.72 39.94 2.83
3473 3854 0.240411 CTCTGCTCTGCTTTGTTGCC 59.760 55.000 0.00 0.00 0.00 4.52
3476 3857 1.068127 CTGCTCTGCTTTGTTGCCTTT 59.932 47.619 0.00 0.00 0.00 3.11
3492 3873 7.946207 TGTTGCCTTTCATTACTGTTGAATTA 58.054 30.769 0.00 0.00 33.37 1.40
3576 3957 6.671614 TTTAAAGCATATAACACTGGGACG 57.328 37.500 0.00 0.00 0.00 4.79
3612 3993 5.411831 AGATCAACACTAGTGATCTTGCA 57.588 39.130 29.30 12.74 44.26 4.08
3747 4128 4.263506 CCCAAGAAGACTAACTGGGTGATT 60.264 45.833 7.29 0.00 0.00 2.57
3850 4231 3.330701 TGGGGAAAAGAGTGCATTAGAGT 59.669 43.478 0.00 0.00 0.00 3.24
3861 4242 5.621193 AGTGCATTAGAGTTAACCAACACT 58.379 37.500 0.88 4.39 38.80 3.55
3930 4311 0.883370 AACCAACCGCGGAAGAAGAC 60.883 55.000 35.90 0.00 0.00 3.01
4055 4436 5.715279 AGGTAGTTGCCTATTCATATCGCTA 59.285 40.000 0.00 0.00 37.04 4.26
4179 4560 9.143631 CAGGAAAATGGAGATTGTGAAATAAAC 57.856 33.333 0.00 0.00 0.00 2.01
4210 4591 1.552578 AGCTGCTGATGAAAATGCCA 58.447 45.000 0.00 0.00 0.00 4.92
4338 4719 3.803778 CAGAAAACTTGGCCATTTGTGAC 59.196 43.478 18.11 8.55 31.18 3.67
4380 4761 1.005275 ATGCGGCGATGGAGATGAG 60.005 57.895 12.98 0.00 0.00 2.90
4388 4769 1.134280 CGATGGAGATGAGCCAGGTTT 60.134 52.381 0.00 0.00 39.11 3.27
4487 4868 1.188863 GGCCCTTCAGACAATGCAAT 58.811 50.000 0.00 0.00 0.00 3.56
4672 5053 1.632589 GGAATTTTCACAGGGCAGGT 58.367 50.000 0.00 0.00 0.00 4.00
4712 5093 1.214589 CTTGAATGCACTGCCAGCC 59.785 57.895 0.00 0.00 0.00 4.85
4713 5094 2.221906 CTTGAATGCACTGCCAGCCC 62.222 60.000 0.00 0.00 0.00 5.19
4714 5095 2.677524 GAATGCACTGCCAGCCCA 60.678 61.111 0.00 0.00 0.00 5.36
4715 5096 2.678934 AATGCACTGCCAGCCCAG 60.679 61.111 0.00 0.00 38.78 4.45
4756 5137 1.006688 CCGAAACCCCTTTTTGCGG 60.007 57.895 0.00 0.00 0.00 5.69
4824 5205 1.019673 GCTATGTGGTGATGTGGCTG 58.980 55.000 0.00 0.00 0.00 4.85
4831 5231 1.680735 TGGTGATGTGGCTGTTTTGTC 59.319 47.619 0.00 0.00 0.00 3.18
4832 5232 1.956477 GGTGATGTGGCTGTTTTGTCT 59.044 47.619 0.00 0.00 0.00 3.41
4833 5233 2.030805 GGTGATGTGGCTGTTTTGTCTC 60.031 50.000 0.00 0.00 0.00 3.36
4834 5234 1.872952 TGATGTGGCTGTTTTGTCTCG 59.127 47.619 0.00 0.00 0.00 4.04
4835 5235 1.197721 GATGTGGCTGTTTTGTCTCGG 59.802 52.381 0.00 0.00 0.00 4.63
4836 5236 0.107410 TGTGGCTGTTTTGTCTCGGT 60.107 50.000 0.00 0.00 0.00 4.69
4837 5237 0.307760 GTGGCTGTTTTGTCTCGGTG 59.692 55.000 0.00 0.00 0.00 4.94
4838 5238 0.179234 TGGCTGTTTTGTCTCGGTGA 59.821 50.000 0.00 0.00 0.00 4.02
4839 5239 1.305201 GGCTGTTTTGTCTCGGTGAA 58.695 50.000 0.00 0.00 0.00 3.18
4840 5240 1.880027 GGCTGTTTTGTCTCGGTGAAT 59.120 47.619 0.00 0.00 0.00 2.57
4841 5241 2.095718 GGCTGTTTTGTCTCGGTGAATC 60.096 50.000 0.00 0.00 0.00 2.52
4842 5242 2.095718 GCTGTTTTGTCTCGGTGAATCC 60.096 50.000 0.00 0.00 0.00 3.01
4854 5254 2.353323 GGTGAATCCGAGTTGTAACCC 58.647 52.381 0.00 0.00 0.00 4.11
4865 5265 1.198408 GTTGTAACCCGCCAGCTTAAC 59.802 52.381 0.00 0.00 0.00 2.01
4867 5267 1.003812 TGTAACCCGCCAGCTTAACAT 59.996 47.619 0.00 0.00 0.00 2.71
4874 5274 3.700577 CCAGCTTAACATGTTGGCG 57.299 52.632 21.42 17.57 0.00 5.69
4890 5290 1.009389 GGCGCTGTATATGAGTCGGC 61.009 60.000 7.64 0.00 35.54 5.54
4936 5337 4.744570 TCTCAGGCATACGAACTGTTAAG 58.255 43.478 0.00 0.00 34.02 1.85
4998 5399 3.780626 ACTGTTCAGCCCTAGAACTAGT 58.219 45.455 7.47 0.00 44.30 2.57
5088 5489 8.461222 TGAAATGGTAAATGATTAGCTGAAGTG 58.539 33.333 0.00 0.00 39.65 3.16
5147 5549 7.124750 TCCTGAATCTGAGTTGTCTAATGATGA 59.875 37.037 0.00 0.00 0.00 2.92
5219 5621 5.627499 TCACTTTCATGTGCTGGATTAAC 57.373 39.130 0.00 0.00 37.81 2.01
5235 5637 4.825085 GGATTAACACCTTGGTGAAGTTGA 59.175 41.667 24.67 7.52 0.00 3.18
5316 5719 3.398318 ACCCCAACTTTTTCAACTCCT 57.602 42.857 0.00 0.00 0.00 3.69
5322 5725 5.812127 CCCAACTTTTTCAACTCCTTTTCAG 59.188 40.000 0.00 0.00 0.00 3.02
5336 5739 8.012957 ACTCCTTTTCAGTGTCTGGTATATAG 57.987 38.462 0.00 0.00 31.51 1.31
5337 5740 7.620094 ACTCCTTTTCAGTGTCTGGTATATAGT 59.380 37.037 0.00 0.00 31.51 2.12
5338 5741 9.132923 CTCCTTTTCAGTGTCTGGTATATAGTA 57.867 37.037 0.00 0.00 31.51 1.82
5339 5742 9.656323 TCCTTTTCAGTGTCTGGTATATAGTAT 57.344 33.333 0.00 0.00 31.51 2.12
5340 5743 9.915629 CCTTTTCAGTGTCTGGTATATAGTATC 57.084 37.037 0.00 0.00 31.51 2.24
5466 5869 4.082845 TGTTTGGAATGGCGGAATAGAAA 58.917 39.130 0.00 0.00 0.00 2.52
5467 5870 4.524714 TGTTTGGAATGGCGGAATAGAAAA 59.475 37.500 0.00 0.00 0.00 2.29
5468 5871 4.981806 TTGGAATGGCGGAATAGAAAAG 57.018 40.909 0.00 0.00 0.00 2.27
5469 5872 3.287222 TGGAATGGCGGAATAGAAAAGG 58.713 45.455 0.00 0.00 0.00 3.11
5470 5873 2.623416 GGAATGGCGGAATAGAAAAGGG 59.377 50.000 0.00 0.00 0.00 3.95
5471 5874 3.551846 GAATGGCGGAATAGAAAAGGGA 58.448 45.455 0.00 0.00 0.00 4.20
5472 5875 3.662759 ATGGCGGAATAGAAAAGGGAA 57.337 42.857 0.00 0.00 0.00 3.97
5473 5876 3.443145 TGGCGGAATAGAAAAGGGAAA 57.557 42.857 0.00 0.00 0.00 3.13
5474 5877 3.086282 TGGCGGAATAGAAAAGGGAAAC 58.914 45.455 0.00 0.00 0.00 2.78
5475 5878 2.096980 GGCGGAATAGAAAAGGGAAACG 59.903 50.000 0.00 0.00 0.00 3.60
5476 5879 2.745821 GCGGAATAGAAAAGGGAAACGT 59.254 45.455 0.00 0.00 0.00 3.99
5477 5880 3.189910 GCGGAATAGAAAAGGGAAACGTT 59.810 43.478 0.00 0.00 40.85 3.99
5478 5881 4.670992 GCGGAATAGAAAAGGGAAACGTTC 60.671 45.833 0.00 0.00 37.47 3.95
5479 5882 4.453136 CGGAATAGAAAAGGGAAACGTTCA 59.547 41.667 0.00 0.00 37.47 3.18
5480 5883 5.616204 CGGAATAGAAAAGGGAAACGTTCAC 60.616 44.000 0.00 0.00 37.47 3.18
5481 5884 5.239963 GGAATAGAAAAGGGAAACGTTCACA 59.760 40.000 0.00 0.00 37.47 3.58
5482 5885 5.941948 ATAGAAAAGGGAAACGTTCACAG 57.058 39.130 0.00 0.00 37.47 3.66
5483 5886 2.357952 AGAAAAGGGAAACGTTCACAGC 59.642 45.455 0.00 0.00 37.47 4.40
5484 5887 1.029681 AAAGGGAAACGTTCACAGCC 58.970 50.000 0.00 0.00 37.47 4.85
5485 5888 1.164041 AAGGGAAACGTTCACAGCCG 61.164 55.000 0.00 0.00 34.83 5.52
5486 5889 2.613506 GGGAAACGTTCACAGCCGG 61.614 63.158 0.00 0.00 31.89 6.13
5487 5890 1.890510 GGAAACGTTCACAGCCGGT 60.891 57.895 0.00 0.00 0.00 5.28
5488 5891 1.568025 GAAACGTTCACAGCCGGTC 59.432 57.895 0.00 0.00 0.00 4.79
5489 5892 2.154427 GAAACGTTCACAGCCGGTCG 62.154 60.000 0.00 0.00 0.00 4.79
5490 5893 2.632136 AAACGTTCACAGCCGGTCGA 62.632 55.000 0.00 0.00 0.00 4.20
5491 5894 3.103911 CGTTCACAGCCGGTCGAC 61.104 66.667 7.13 7.13 0.00 4.20
5492 5895 2.737376 GTTCACAGCCGGTCGACC 60.737 66.667 25.28 25.28 0.00 4.79
5503 5906 4.681978 GTCGACCGGCTGCCTGTT 62.682 66.667 17.03 0.00 0.00 3.16
5504 5907 4.373116 TCGACCGGCTGCCTGTTC 62.373 66.667 17.03 8.82 0.00 3.18
5541 5944 4.569023 CGCGCGCCAGGTCATCTA 62.569 66.667 27.72 0.00 0.00 1.98
5542 5945 2.659897 GCGCGCCAGGTCATCTAG 60.660 66.667 23.24 0.00 0.00 2.43
5543 5946 2.028190 CGCGCCAGGTCATCTAGG 59.972 66.667 0.00 0.00 0.00 3.02
5544 5947 2.786495 CGCGCCAGGTCATCTAGGT 61.786 63.158 0.00 0.00 0.00 3.08
5545 5948 1.227380 GCGCCAGGTCATCTAGGTG 60.227 63.158 0.00 0.00 34.83 4.00
5546 5949 1.443407 CGCCAGGTCATCTAGGTGG 59.557 63.158 2.43 0.00 0.00 4.61
5547 5950 1.832912 GCCAGGTCATCTAGGTGGG 59.167 63.158 2.43 0.00 0.00 4.61
5548 5951 1.832912 CCAGGTCATCTAGGTGGGC 59.167 63.158 2.43 0.00 0.00 5.36
5549 5952 1.700042 CCAGGTCATCTAGGTGGGCC 61.700 65.000 2.43 6.30 0.00 5.80
5550 5953 1.762460 AGGTCATCTAGGTGGGCCG 60.762 63.158 2.43 0.00 40.50 6.13
5551 5954 2.109181 GTCATCTAGGTGGGCCGC 59.891 66.667 9.05 9.05 40.50 6.53
5552 5955 2.364973 TCATCTAGGTGGGCCGCA 60.365 61.111 20.39 0.00 40.50 5.69
5553 5956 2.203070 CATCTAGGTGGGCCGCAC 60.203 66.667 20.39 14.11 40.50 5.34
5554 5957 3.849951 ATCTAGGTGGGCCGCACG 61.850 66.667 20.39 6.30 40.50 5.34
5571 5974 3.142838 GCAACAGCGCATCCCCAT 61.143 61.111 11.47 0.00 0.00 4.00
5572 5975 3.113745 CAACAGCGCATCCCCATC 58.886 61.111 11.47 0.00 0.00 3.51
5573 5976 2.124151 AACAGCGCATCCCCATCC 60.124 61.111 11.47 0.00 0.00 3.51
5574 5977 2.683465 AACAGCGCATCCCCATCCT 61.683 57.895 11.47 0.00 0.00 3.24
5575 5978 2.194056 CAGCGCATCCCCATCCTT 59.806 61.111 11.47 0.00 0.00 3.36
5576 5979 1.344953 ACAGCGCATCCCCATCCTTA 61.345 55.000 11.47 0.00 0.00 2.69
5577 5980 0.037303 CAGCGCATCCCCATCCTTAT 59.963 55.000 11.47 0.00 0.00 1.73
5578 5981 0.326264 AGCGCATCCCCATCCTTATC 59.674 55.000 11.47 0.00 0.00 1.75
5579 5982 0.678048 GCGCATCCCCATCCTTATCC 60.678 60.000 0.30 0.00 0.00 2.59
5580 5983 0.987294 CGCATCCCCATCCTTATCCT 59.013 55.000 0.00 0.00 0.00 3.24
5581 5984 1.352352 CGCATCCCCATCCTTATCCTT 59.648 52.381 0.00 0.00 0.00 3.36
5582 5985 2.571653 CGCATCCCCATCCTTATCCTTA 59.428 50.000 0.00 0.00 0.00 2.69
5583 5986 3.200825 CGCATCCCCATCCTTATCCTTAT 59.799 47.826 0.00 0.00 0.00 1.73
5584 5987 4.684485 CGCATCCCCATCCTTATCCTTATC 60.684 50.000 0.00 0.00 0.00 1.75
5585 5988 4.476479 GCATCCCCATCCTTATCCTTATCT 59.524 45.833 0.00 0.00 0.00 1.98
5586 5989 5.044550 GCATCCCCATCCTTATCCTTATCTT 60.045 44.000 0.00 0.00 0.00 2.40
5587 5990 6.657875 CATCCCCATCCTTATCCTTATCTTC 58.342 44.000 0.00 0.00 0.00 2.87
5588 5991 5.994629 TCCCCATCCTTATCCTTATCTTCT 58.005 41.667 0.00 0.00 0.00 2.85
5589 5992 6.402442 TCCCCATCCTTATCCTTATCTTCTT 58.598 40.000 0.00 0.00 0.00 2.52
5590 5993 6.857222 TCCCCATCCTTATCCTTATCTTCTTT 59.143 38.462 0.00 0.00 0.00 2.52
5591 5994 8.022666 TCCCCATCCTTATCCTTATCTTCTTTA 58.977 37.037 0.00 0.00 0.00 1.85
5592 5995 8.840751 CCCCATCCTTATCCTTATCTTCTTTAT 58.159 37.037 0.00 0.00 0.00 1.40
5593 5996 9.898152 CCCATCCTTATCCTTATCTTCTTTATC 57.102 37.037 0.00 0.00 0.00 1.75
5604 6007 9.500785 CCTTATCTTCTTTATCTTCTGGAATCC 57.499 37.037 0.00 0.00 0.00 3.01
5605 6008 9.500785 CTTATCTTCTTTATCTTCTGGAATCCC 57.499 37.037 0.00 0.00 0.00 3.85
5606 6009 6.253946 TCTTCTTTATCTTCTGGAATCCCC 57.746 41.667 0.00 0.00 0.00 4.81
5607 6010 5.973124 TCTTCTTTATCTTCTGGAATCCCCT 59.027 40.000 0.00 0.00 35.38 4.79
5608 6011 5.896073 TCTTTATCTTCTGGAATCCCCTC 57.104 43.478 0.00 0.00 35.38 4.30
5609 6012 4.345257 TCTTTATCTTCTGGAATCCCCTCG 59.655 45.833 0.00 0.00 35.38 4.63
5610 6013 2.182516 ATCTTCTGGAATCCCCTCGT 57.817 50.000 0.00 0.00 35.38 4.18
5611 6014 1.486211 TCTTCTGGAATCCCCTCGTC 58.514 55.000 0.00 0.00 35.38 4.20
5612 6015 0.466124 CTTCTGGAATCCCCTCGTCC 59.534 60.000 0.00 0.00 35.38 4.79
5613 6016 0.252513 TTCTGGAATCCCCTCGTCCA 60.253 55.000 0.00 0.00 39.14 4.02
5614 6017 0.976073 TCTGGAATCCCCTCGTCCAC 60.976 60.000 0.00 0.00 36.51 4.02
5615 6018 0.978146 CTGGAATCCCCTCGTCCACT 60.978 60.000 0.00 0.00 36.51 4.00
5616 6019 0.976073 TGGAATCCCCTCGTCCACTC 60.976 60.000 0.00 0.00 36.51 3.51
5617 6020 1.437986 GAATCCCCTCGTCCACTCG 59.562 63.158 0.00 0.00 0.00 4.18
5618 6021 1.305046 AATCCCCTCGTCCACTCGT 60.305 57.895 0.00 0.00 0.00 4.18
5619 6022 0.903454 AATCCCCTCGTCCACTCGTT 60.903 55.000 0.00 0.00 0.00 3.85
5620 6023 1.321074 ATCCCCTCGTCCACTCGTTC 61.321 60.000 0.00 0.00 0.00 3.95
5621 6024 1.977544 CCCCTCGTCCACTCGTTCT 60.978 63.158 0.00 0.00 0.00 3.01
5622 6025 1.507174 CCCTCGTCCACTCGTTCTC 59.493 63.158 0.00 0.00 0.00 2.87
5623 6026 0.961358 CCCTCGTCCACTCGTTCTCT 60.961 60.000 0.00 0.00 0.00 3.10
5624 6027 0.882474 CCTCGTCCACTCGTTCTCTT 59.118 55.000 0.00 0.00 0.00 2.85
5625 6028 1.135632 CCTCGTCCACTCGTTCTCTTC 60.136 57.143 0.00 0.00 0.00 2.87
5626 6029 0.879765 TCGTCCACTCGTTCTCTTCC 59.120 55.000 0.00 0.00 0.00 3.46
5627 6030 0.596577 CGTCCACTCGTTCTCTTCCA 59.403 55.000 0.00 0.00 0.00 3.53
5628 6031 1.401670 CGTCCACTCGTTCTCTTCCAG 60.402 57.143 0.00 0.00 0.00 3.86
5629 6032 0.603569 TCCACTCGTTCTCTTCCAGC 59.396 55.000 0.00 0.00 0.00 4.85
5630 6033 0.318441 CCACTCGTTCTCTTCCAGCA 59.682 55.000 0.00 0.00 0.00 4.41
5631 6034 1.671261 CCACTCGTTCTCTTCCAGCAG 60.671 57.143 0.00 0.00 0.00 4.24
5632 6035 0.037790 ACTCGTTCTCTTCCAGCAGC 60.038 55.000 0.00 0.00 0.00 5.25
5633 6036 0.246086 CTCGTTCTCTTCCAGCAGCT 59.754 55.000 0.00 0.00 0.00 4.24
5634 6037 0.244994 TCGTTCTCTTCCAGCAGCTC 59.755 55.000 0.00 0.00 0.00 4.09
5635 6038 0.246086 CGTTCTCTTCCAGCAGCTCT 59.754 55.000 0.00 0.00 0.00 4.09
5636 6039 1.337635 CGTTCTCTTCCAGCAGCTCTT 60.338 52.381 0.00 0.00 0.00 2.85
5637 6040 2.345876 GTTCTCTTCCAGCAGCTCTTC 58.654 52.381 0.00 0.00 0.00 2.87
5638 6041 1.935799 TCTCTTCCAGCAGCTCTTCT 58.064 50.000 0.00 0.00 0.00 2.85
5639 6042 1.824230 TCTCTTCCAGCAGCTCTTCTC 59.176 52.381 0.00 0.00 0.00 2.87
5640 6043 1.826720 CTCTTCCAGCAGCTCTTCTCT 59.173 52.381 0.00 0.00 0.00 3.10
5641 6044 1.824230 TCTTCCAGCAGCTCTTCTCTC 59.176 52.381 0.00 0.00 0.00 3.20
5642 6045 0.901124 TTCCAGCAGCTCTTCTCTCC 59.099 55.000 0.00 0.00 0.00 3.71
5643 6046 0.975040 TCCAGCAGCTCTTCTCTCCC 60.975 60.000 0.00 0.00 0.00 4.30
5644 6047 0.977108 CCAGCAGCTCTTCTCTCCCT 60.977 60.000 0.00 0.00 0.00 4.20
5645 6048 0.461135 CAGCAGCTCTTCTCTCCCTC 59.539 60.000 0.00 0.00 0.00 4.30
5646 6049 1.037030 AGCAGCTCTTCTCTCCCTCG 61.037 60.000 0.00 0.00 0.00 4.63
5647 6050 1.319614 GCAGCTCTTCTCTCCCTCGT 61.320 60.000 0.00 0.00 0.00 4.18
5648 6051 0.738389 CAGCTCTTCTCTCCCTCGTC 59.262 60.000 0.00 0.00 0.00 4.20
5649 6052 0.623723 AGCTCTTCTCTCCCTCGTCT 59.376 55.000 0.00 0.00 0.00 4.18
5650 6053 0.738389 GCTCTTCTCTCCCTCGTCTG 59.262 60.000 0.00 0.00 0.00 3.51
5651 6054 1.680555 GCTCTTCTCTCCCTCGTCTGA 60.681 57.143 0.00 0.00 0.00 3.27
5652 6055 2.717390 CTCTTCTCTCCCTCGTCTGAA 58.283 52.381 0.00 0.00 0.00 3.02
5653 6056 3.085533 CTCTTCTCTCCCTCGTCTGAAA 58.914 50.000 0.00 0.00 0.00 2.69
5654 6057 3.085533 TCTTCTCTCCCTCGTCTGAAAG 58.914 50.000 0.00 0.00 0.00 2.62
5655 6058 2.881111 TCTCTCCCTCGTCTGAAAGA 57.119 50.000 0.00 0.00 43.69 2.52
5668 6071 3.206150 TCTGAAAGAAACACCACTCTGC 58.794 45.455 0.00 0.00 42.31 4.26
5669 6072 2.291741 CTGAAAGAAACACCACTCTGCC 59.708 50.000 0.00 0.00 34.07 4.85
5670 6073 2.297701 GAAAGAAACACCACTCTGCCA 58.702 47.619 0.00 0.00 0.00 4.92
5671 6074 2.664402 AAGAAACACCACTCTGCCAT 57.336 45.000 0.00 0.00 0.00 4.40
5672 6075 1.901591 AGAAACACCACTCTGCCATG 58.098 50.000 0.00 0.00 0.00 3.66
5673 6076 0.883833 GAAACACCACTCTGCCATGG 59.116 55.000 7.63 7.63 42.13 3.66
5674 6077 0.478072 AAACACCACTCTGCCATGGA 59.522 50.000 18.40 0.00 39.46 3.41
5675 6078 0.700564 AACACCACTCTGCCATGGAT 59.299 50.000 18.40 0.00 39.46 3.41
5676 6079 0.700564 ACACCACTCTGCCATGGATT 59.299 50.000 18.40 0.00 39.46 3.01
5677 6080 1.076024 ACACCACTCTGCCATGGATTT 59.924 47.619 18.40 0.00 39.46 2.17
5678 6081 1.475280 CACCACTCTGCCATGGATTTG 59.525 52.381 18.40 4.77 39.46 2.32
5679 6082 0.458669 CCACTCTGCCATGGATTTGC 59.541 55.000 18.40 0.00 38.34 3.68
5680 6083 1.471119 CACTCTGCCATGGATTTGCT 58.529 50.000 18.40 0.00 0.00 3.91
5681 6084 1.822990 CACTCTGCCATGGATTTGCTT 59.177 47.619 18.40 0.00 0.00 3.91
5682 6085 1.822990 ACTCTGCCATGGATTTGCTTG 59.177 47.619 18.40 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.843240 CTCGAGAAGCCGCGTTGC 61.843 66.667 6.58 1.35 36.92 4.17
1 2 3.843240 GCTCGAGAAGCCGCGTTG 61.843 66.667 18.75 0.00 45.92 4.10
64 65 2.361737 GTTTCTCCAGGGCCAGGC 60.362 66.667 10.69 1.26 0.00 4.85
65 66 1.001641 CAGTTTCTCCAGGGCCAGG 60.002 63.158 9.04 9.04 0.00 4.45
66 67 1.676967 GCAGTTTCTCCAGGGCCAG 60.677 63.158 6.18 0.00 0.00 4.85
67 68 2.156098 AGCAGTTTCTCCAGGGCCA 61.156 57.895 6.18 0.00 0.00 5.36
68 69 1.676967 CAGCAGTTTCTCCAGGGCC 60.677 63.158 0.00 0.00 0.00 5.80
69 70 0.034670 ATCAGCAGTTTCTCCAGGGC 60.035 55.000 0.00 0.00 0.00 5.19
70 71 2.363683 GAATCAGCAGTTTCTCCAGGG 58.636 52.381 0.00 0.00 0.00 4.45
71 72 2.005451 CGAATCAGCAGTTTCTCCAGG 58.995 52.381 0.00 0.00 0.00 4.45
72 73 2.005451 CCGAATCAGCAGTTTCTCCAG 58.995 52.381 0.00 0.00 0.00 3.86
73 74 1.339055 CCCGAATCAGCAGTTTCTCCA 60.339 52.381 0.00 0.00 0.00 3.86
74 75 1.373570 CCCGAATCAGCAGTTTCTCC 58.626 55.000 0.00 0.00 0.00 3.71
75 76 0.729690 GCCCGAATCAGCAGTTTCTC 59.270 55.000 0.00 0.00 0.00 2.87
76 77 1.021390 CGCCCGAATCAGCAGTTTCT 61.021 55.000 0.00 0.00 0.00 2.52
77 78 1.298859 ACGCCCGAATCAGCAGTTTC 61.299 55.000 0.00 0.00 0.00 2.78
78 79 0.889186 AACGCCCGAATCAGCAGTTT 60.889 50.000 0.00 0.00 0.00 2.66
79 80 1.298859 GAACGCCCGAATCAGCAGTT 61.299 55.000 0.00 3.59 0.00 3.16
80 81 1.741770 GAACGCCCGAATCAGCAGT 60.742 57.895 0.00 0.00 0.00 4.40
81 82 2.464459 GGAACGCCCGAATCAGCAG 61.464 63.158 0.00 0.00 0.00 4.24
82 83 1.609635 TAGGAACGCCCGAATCAGCA 61.610 55.000 0.00 0.00 40.87 4.41
83 84 0.876342 CTAGGAACGCCCGAATCAGC 60.876 60.000 0.00 0.00 40.87 4.26
84 85 0.249489 CCTAGGAACGCCCGAATCAG 60.249 60.000 1.05 0.00 40.87 2.90
85 86 1.682451 CCCTAGGAACGCCCGAATCA 61.682 60.000 11.48 0.00 40.87 2.57
86 87 1.069258 CCCTAGGAACGCCCGAATC 59.931 63.158 11.48 0.00 40.87 2.52
87 88 1.382146 TCCCTAGGAACGCCCGAAT 60.382 57.895 11.48 0.00 40.87 3.34
88 89 2.037687 TCCCTAGGAACGCCCGAA 59.962 61.111 11.48 0.00 40.87 4.30
89 90 2.441532 CTCCCTAGGAACGCCCGA 60.442 66.667 11.48 0.00 40.87 5.14
90 91 4.222847 GCTCCCTAGGAACGCCCG 62.223 72.222 11.48 0.00 40.87 6.13
91 92 3.862991 GGCTCCCTAGGAACGCCC 61.863 72.222 19.45 6.46 37.16 6.13
92 93 3.081409 TGGCTCCCTAGGAACGCC 61.081 66.667 21.92 21.92 41.62 5.68
93 94 2.501610 CTGGCTCCCTAGGAACGC 59.498 66.667 11.48 9.31 0.00 4.84
94 95 3.095347 GCCTGGCTCCCTAGGAACG 62.095 68.421 11.48 0.00 36.11 3.95
95 96 2.747443 GGCCTGGCTCCCTAGGAAC 61.747 68.421 19.68 0.00 36.11 3.62
96 97 2.366972 GGCCTGGCTCCCTAGGAA 60.367 66.667 19.68 0.00 36.11 3.36
97 98 4.499116 GGGCCTGGCTCCCTAGGA 62.499 72.222 19.68 0.00 40.66 2.94
98 99 4.823732 TGGGCCTGGCTCCCTAGG 62.824 72.222 17.57 0.06 44.23 3.02
99 100 3.167105 CTGGGCCTGGCTCCCTAG 61.167 72.222 17.57 2.57 44.23 3.02
100 101 4.823732 CCTGGGCCTGGCTCCCTA 62.824 72.222 17.57 0.00 44.23 3.53
104 105 4.106925 CACTCCTGGGCCTGGCTC 62.107 72.222 23.72 16.49 0.00 4.70
107 108 1.852157 TAAAGCACTCCTGGGCCTGG 61.852 60.000 22.66 22.66 0.00 4.45
108 109 0.038166 TTAAAGCACTCCTGGGCCTG 59.962 55.000 4.53 3.68 0.00 4.85
109 110 0.329596 CTTAAAGCACTCCTGGGCCT 59.670 55.000 4.53 0.00 0.00 5.19
110 111 0.681243 CCTTAAAGCACTCCTGGGCC 60.681 60.000 0.00 0.00 0.00 5.80
111 112 0.038310 ACCTTAAAGCACTCCTGGGC 59.962 55.000 0.00 0.00 0.00 5.36
112 113 2.677037 CGTACCTTAAAGCACTCCTGGG 60.677 54.545 0.00 0.00 0.00 4.45
113 114 2.028385 ACGTACCTTAAAGCACTCCTGG 60.028 50.000 0.00 0.00 0.00 4.45
114 115 2.993899 CACGTACCTTAAAGCACTCCTG 59.006 50.000 0.00 0.00 0.00 3.86
115 116 2.612221 GCACGTACCTTAAAGCACTCCT 60.612 50.000 0.00 0.00 0.00 3.69
116 117 1.730612 GCACGTACCTTAAAGCACTCC 59.269 52.381 0.00 0.00 0.00 3.85
117 118 1.730612 GGCACGTACCTTAAAGCACTC 59.269 52.381 0.00 0.00 0.00 3.51
118 119 1.071071 TGGCACGTACCTTAAAGCACT 59.929 47.619 6.34 0.00 0.00 4.40
119 120 1.515081 TGGCACGTACCTTAAAGCAC 58.485 50.000 6.34 0.00 0.00 4.40
120 121 2.080693 CATGGCACGTACCTTAAAGCA 58.919 47.619 6.34 0.00 0.00 3.91
121 122 1.202143 GCATGGCACGTACCTTAAAGC 60.202 52.381 6.34 0.00 0.00 3.51
122 123 1.062002 CGCATGGCACGTACCTTAAAG 59.938 52.381 6.34 0.00 0.00 1.85
123 124 1.080298 CGCATGGCACGTACCTTAAA 58.920 50.000 6.34 0.00 0.00 1.52
124 125 0.741574 CCGCATGGCACGTACCTTAA 60.742 55.000 6.34 0.00 0.00 1.85
125 126 1.153529 CCGCATGGCACGTACCTTA 60.154 57.895 6.34 0.00 0.00 2.69
126 127 2.435938 CCGCATGGCACGTACCTT 60.436 61.111 6.34 0.00 0.00 3.50
127 128 4.467084 CCCGCATGGCACGTACCT 62.467 66.667 6.34 0.00 0.00 3.08
137 138 3.803082 CACTGTTCGGCCCGCATG 61.803 66.667 0.00 0.00 0.00 4.06
138 139 3.545124 TTCACTGTTCGGCCCGCAT 62.545 57.895 0.00 0.00 0.00 4.73
139 140 3.758973 TTTCACTGTTCGGCCCGCA 62.759 57.895 0.00 0.00 0.00 5.69
140 141 2.966309 CTTTCACTGTTCGGCCCGC 61.966 63.158 0.00 0.00 0.00 6.13
141 142 2.966309 GCTTTCACTGTTCGGCCCG 61.966 63.158 0.00 0.00 0.00 6.13
142 143 1.452145 TTGCTTTCACTGTTCGGCCC 61.452 55.000 0.00 0.00 0.00 5.80
143 144 0.040067 CTTGCTTTCACTGTTCGGCC 60.040 55.000 0.00 0.00 0.00 6.13
144 145 0.661483 GCTTGCTTTCACTGTTCGGC 60.661 55.000 0.00 0.00 0.00 5.54
145 146 0.662619 TGCTTGCTTTCACTGTTCGG 59.337 50.000 0.00 0.00 0.00 4.30
146 147 2.111756 GTTGCTTGCTTTCACTGTTCG 58.888 47.619 0.00 0.00 0.00 3.95
147 148 2.463876 GGTTGCTTGCTTTCACTGTTC 58.536 47.619 0.00 0.00 0.00 3.18
148 149 1.202290 CGGTTGCTTGCTTTCACTGTT 60.202 47.619 0.00 0.00 0.00 3.16
149 150 0.381801 CGGTTGCTTGCTTTCACTGT 59.618 50.000 0.00 0.00 0.00 3.55
150 151 0.662619 TCGGTTGCTTGCTTTCACTG 59.337 50.000 0.00 0.00 0.00 3.66
151 152 1.065551 GTTCGGTTGCTTGCTTTCACT 59.934 47.619 0.00 0.00 0.00 3.41
152 153 1.202245 TGTTCGGTTGCTTGCTTTCAC 60.202 47.619 0.00 0.00 0.00 3.18
153 154 1.065401 CTGTTCGGTTGCTTGCTTTCA 59.935 47.619 0.00 0.00 0.00 2.69
154 155 1.600413 CCTGTTCGGTTGCTTGCTTTC 60.600 52.381 0.00 0.00 0.00 2.62
155 156 0.385390 CCTGTTCGGTTGCTTGCTTT 59.615 50.000 0.00 0.00 0.00 3.51
156 157 2.032981 CCTGTTCGGTTGCTTGCTT 58.967 52.632 0.00 0.00 0.00 3.91
157 158 2.555547 GCCTGTTCGGTTGCTTGCT 61.556 57.895 0.00 0.00 34.25 3.91
158 159 2.050077 GCCTGTTCGGTTGCTTGC 60.050 61.111 0.00 0.00 34.25 4.01
159 160 2.644992 GGCCTGTTCGGTTGCTTG 59.355 61.111 0.00 0.00 34.25 4.01
160 161 2.978010 CGGCCTGTTCGGTTGCTT 60.978 61.111 0.00 0.00 34.25 3.91
163 164 1.644786 GAATCCGGCCTGTTCGGTTG 61.645 60.000 0.00 0.00 46.82 3.77
164 165 1.376812 GAATCCGGCCTGTTCGGTT 60.377 57.895 0.00 0.00 46.82 4.44
165 166 1.838073 AAGAATCCGGCCTGTTCGGT 61.838 55.000 0.00 0.00 46.82 4.69
167 168 0.727398 GAAAGAATCCGGCCTGTTCG 59.273 55.000 0.00 0.00 0.00 3.95
168 169 1.095600 GGAAAGAATCCGGCCTGTTC 58.904 55.000 0.00 2.14 38.79 3.18
169 170 3.266240 GGAAAGAATCCGGCCTGTT 57.734 52.632 0.00 0.00 38.79 3.16
195 196 2.757099 GCATGAGGCCCAACCAGG 60.757 66.667 0.00 0.00 43.14 4.45
196 197 2.036098 TGCATGAGGCCCAACCAG 59.964 61.111 0.00 0.00 43.89 4.00
197 198 2.036098 CTGCATGAGGCCCAACCA 59.964 61.111 0.00 0.00 43.89 3.67
198 199 2.757099 CCTGCATGAGGCCCAACC 60.757 66.667 0.00 0.00 43.89 3.77
205 206 0.037975 GTTTGGTTGCCTGCATGAGG 60.038 55.000 0.00 1.51 46.13 3.86
206 207 0.675083 TGTTTGGTTGCCTGCATGAG 59.325 50.000 0.00 0.00 0.00 2.90
207 208 0.388659 GTGTTTGGTTGCCTGCATGA 59.611 50.000 0.00 0.00 0.00 3.07
208 209 0.940519 CGTGTTTGGTTGCCTGCATG 60.941 55.000 0.00 0.00 0.00 4.06
209 210 1.363443 CGTGTTTGGTTGCCTGCAT 59.637 52.632 0.00 0.00 0.00 3.96
210 211 2.804167 CGTGTTTGGTTGCCTGCA 59.196 55.556 0.00 0.00 0.00 4.41
211 212 2.658268 GCGTGTTTGGTTGCCTGC 60.658 61.111 0.00 0.00 0.00 4.85
212 213 2.027460 GGCGTGTTTGGTTGCCTG 59.973 61.111 0.00 0.00 44.16 4.85
213 214 3.223589 GGGCGTGTTTGGTTGCCT 61.224 61.111 1.77 0.00 46.72 4.75
214 215 1.528292 TATGGGCGTGTTTGGTTGCC 61.528 55.000 0.00 0.00 46.82 4.52
215 216 0.109319 CTATGGGCGTGTTTGGTTGC 60.109 55.000 0.00 0.00 0.00 4.17
216 217 0.109319 GCTATGGGCGTGTTTGGTTG 60.109 55.000 0.00 0.00 0.00 3.77
217 218 1.248101 GGCTATGGGCGTGTTTGGTT 61.248 55.000 0.00 0.00 42.94 3.67
218 219 1.677633 GGCTATGGGCGTGTTTGGT 60.678 57.895 0.00 0.00 42.94 3.67
219 220 0.965363 AAGGCTATGGGCGTGTTTGG 60.965 55.000 0.00 0.00 42.94 3.28
220 221 0.887933 AAAGGCTATGGGCGTGTTTG 59.112 50.000 0.00 0.00 42.94 2.93
221 222 0.887933 CAAAGGCTATGGGCGTGTTT 59.112 50.000 0.00 0.00 42.94 2.83
222 223 1.595093 GCAAAGGCTATGGGCGTGTT 61.595 55.000 10.09 0.00 42.94 3.32
223 224 2.046285 GCAAAGGCTATGGGCGTGT 61.046 57.895 10.09 0.00 42.94 4.49
224 225 2.800736 GCAAAGGCTATGGGCGTG 59.199 61.111 0.00 1.03 42.94 5.34
225 226 2.824041 CGCAAAGGCTATGGGCGT 60.824 61.111 12.04 0.00 42.51 5.68
228 229 1.315257 AACAGCGCAAAGGCTATGGG 61.315 55.000 11.47 0.00 42.53 4.00
229 230 0.179156 CAACAGCGCAAAGGCTATGG 60.179 55.000 11.47 0.00 42.53 2.74
230 231 0.179156 CCAACAGCGCAAAGGCTATG 60.179 55.000 11.47 0.00 42.53 2.23
231 232 0.322456 TCCAACAGCGCAAAGGCTAT 60.322 50.000 11.47 0.00 42.53 2.97
232 233 1.072332 TCCAACAGCGCAAAGGCTA 59.928 52.632 11.47 0.00 42.53 3.93
233 234 2.203337 TCCAACAGCGCAAAGGCT 60.203 55.556 11.47 0.00 46.13 4.58
234 235 2.050077 GTCCAACAGCGCAAAGGC 60.050 61.111 11.47 0.00 0.00 4.35
235 236 2.252260 CGTCCAACAGCGCAAAGG 59.748 61.111 11.47 5.96 0.00 3.11
241 242 2.049156 TCTCTGCGTCCAACAGCG 60.049 61.111 0.00 0.00 35.04 5.18
242 243 2.386660 GCTCTCTGCGTCCAACAGC 61.387 63.158 0.00 0.00 35.04 4.40
243 244 3.867771 GCTCTCTGCGTCCAACAG 58.132 61.111 0.00 0.00 36.44 3.16
265 266 4.526970 TCTCTGAGTGCTCCAAACTTTTT 58.473 39.130 4.32 0.00 0.00 1.94
266 267 4.133078 CTCTCTGAGTGCTCCAAACTTTT 58.867 43.478 4.32 0.00 0.00 2.27
267 268 3.737850 CTCTCTGAGTGCTCCAAACTTT 58.262 45.455 4.32 0.00 0.00 2.66
268 269 2.549778 GCTCTCTGAGTGCTCCAAACTT 60.550 50.000 20.99 0.00 32.42 2.66
269 270 1.001860 GCTCTCTGAGTGCTCCAAACT 59.998 52.381 20.99 0.00 32.42 2.66
270 271 1.437625 GCTCTCTGAGTGCTCCAAAC 58.562 55.000 20.99 0.00 32.42 2.93
271 272 0.037882 CGCTCTCTGAGTGCTCCAAA 60.038 55.000 24.15 0.00 33.39 3.28
272 273 1.181741 ACGCTCTCTGAGTGCTCCAA 61.182 55.000 24.15 0.00 43.14 3.53
273 274 1.590610 GACGCTCTCTGAGTGCTCCA 61.591 60.000 24.15 0.00 43.14 3.86
274 275 1.138671 GACGCTCTCTGAGTGCTCC 59.861 63.158 24.15 14.34 43.14 4.70
275 276 0.455410 ATGACGCTCTCTGAGTGCTC 59.545 55.000 24.15 20.06 43.14 4.26
276 277 1.756430 TATGACGCTCTCTGAGTGCT 58.244 50.000 24.15 14.12 43.14 4.40
277 278 2.791383 ATATGACGCTCTCTGAGTGC 57.209 50.000 18.99 18.99 43.14 4.40
278 279 5.681337 TTCTATATGACGCTCTCTGAGTG 57.319 43.478 4.32 3.33 44.67 3.51
279 280 6.058833 TCTTTCTATATGACGCTCTCTGAGT 58.941 40.000 4.32 0.00 31.39 3.41
280 281 6.552859 TCTTTCTATATGACGCTCTCTGAG 57.447 41.667 0.00 0.00 0.00 3.35
281 282 7.517614 AATCTTTCTATATGACGCTCTCTGA 57.482 36.000 0.00 0.00 0.00 3.27
282 283 8.586570 AAAATCTTTCTATATGACGCTCTCTG 57.413 34.615 0.00 0.00 0.00 3.35
306 307 4.095782 GCCTATGAGCGGACAATGTAAAAA 59.904 41.667 0.00 0.00 0.00 1.94
307 308 3.625764 GCCTATGAGCGGACAATGTAAAA 59.374 43.478 0.00 0.00 0.00 1.52
308 309 3.202906 GCCTATGAGCGGACAATGTAAA 58.797 45.455 0.00 0.00 0.00 2.01
309 310 2.484770 GGCCTATGAGCGGACAATGTAA 60.485 50.000 0.00 0.00 0.00 2.41
310 311 1.070134 GGCCTATGAGCGGACAATGTA 59.930 52.381 0.00 0.00 0.00 2.29
311 312 0.179045 GGCCTATGAGCGGACAATGT 60.179 55.000 0.00 0.00 0.00 2.71
312 313 0.886490 GGGCCTATGAGCGGACAATG 60.886 60.000 0.84 0.00 0.00 2.82
316 317 1.302033 CATGGGCCTATGAGCGGAC 60.302 63.158 24.03 0.00 0.00 4.79
343 345 3.118038 GGTTTGGATGGGCTATGAGTGTA 60.118 47.826 0.00 0.00 0.00 2.90
344 346 2.357154 GGTTTGGATGGGCTATGAGTGT 60.357 50.000 0.00 0.00 0.00 3.55
345 347 2.301346 GGTTTGGATGGGCTATGAGTG 58.699 52.381 0.00 0.00 0.00 3.51
363 368 1.149854 GGGACCGTGAAGTTTGGGT 59.850 57.895 0.00 0.00 34.94 4.51
364 369 1.149627 TGGGACCGTGAAGTTTGGG 59.850 57.895 0.00 0.00 0.00 4.12
366 371 1.170290 GGGTGGGACCGTGAAGTTTG 61.170 60.000 0.00 0.00 39.83 2.93
367 372 1.149854 GGGTGGGACCGTGAAGTTT 59.850 57.895 0.00 0.00 39.83 2.66
401 406 1.143073 GGGGTTGACTTGGTCTTCTGT 59.857 52.381 0.00 0.00 33.15 3.41
403 408 0.396811 CGGGGTTGACTTGGTCTTCT 59.603 55.000 0.00 0.00 33.15 2.85
809 814 2.335369 GGACGGGATGGACGATCG 59.665 66.667 14.88 14.88 34.93 3.69
812 817 3.445687 CGTGGACGGGATGGACGA 61.446 66.667 0.00 0.00 35.37 4.20
814 819 4.077184 TGCGTGGACGGGATGGAC 62.077 66.667 0.71 0.00 40.23 4.02
815 820 4.077184 GTGCGTGGACGGGATGGA 62.077 66.667 0.71 0.00 40.23 3.41
871 877 1.477685 AATCGGAGTTGACCACGGGT 61.478 55.000 0.00 0.00 39.44 5.28
1215 1230 1.531149 CCGCACAAACTAGTGGTGAAG 59.469 52.381 24.50 18.02 39.87 3.02
1226 1241 2.327568 CATCCATTGAACCGCACAAAC 58.672 47.619 0.00 0.00 0.00 2.93
1230 1245 0.456653 GTGCATCCATTGAACCGCAC 60.457 55.000 0.00 0.00 37.76 5.34
1259 1274 1.357761 ACAAAATCCCACCCTTCCGAT 59.642 47.619 0.00 0.00 0.00 4.18
1291 1306 6.373005 TCCAAATCCTTAACAGAGTGATCA 57.627 37.500 0.00 0.00 0.00 2.92
1308 1323 1.006832 CGACGCCTTTCGATCCAAAT 58.993 50.000 0.00 0.00 41.78 2.32
1350 1396 1.591863 GAGCCGTGATCCTAACGCC 60.592 63.158 0.00 0.00 39.69 5.68
1378 1442 1.389609 GCCTTCCATGCACATCCCAG 61.390 60.000 0.00 0.00 0.00 4.45
1435 1499 2.240493 AACTACAAAGCACTGACGCT 57.760 45.000 0.00 0.00 46.67 5.07
1464 1528 0.731514 CTGCCAGACAATTGCAAGCG 60.732 55.000 4.94 0.23 34.06 4.68
1476 1540 1.895798 AGACGTCATCTTTCTGCCAGA 59.104 47.619 19.50 0.00 31.62 3.86
1478 1542 2.839486 AAGACGTCATCTTTCTGCCA 57.161 45.000 19.50 0.00 46.05 4.92
1495 1559 5.389859 TCTCAACCATAACCAATGCAAAG 57.610 39.130 0.00 0.00 33.92 2.77
1676 1740 3.859386 CCCGAATTGCTATTGAACAAAGC 59.141 43.478 0.00 11.62 36.77 3.51
1685 1749 3.577805 AAGCCTACCCGAATTGCTATT 57.422 42.857 0.00 0.00 0.00 1.73
1712 1777 1.069775 AATAAACAGTCACCCGGGGT 58.930 50.000 27.92 14.51 35.62 4.95
1736 1801 5.334105 CGATGAATGAACTCCTTTGACGTTT 60.334 40.000 0.00 0.00 0.00 3.60
1768 1833 1.132588 GACACAACAGCAGAGTCGAC 58.867 55.000 7.70 7.70 0.00 4.20
1789 1854 4.864704 TGGCCATCCAAAAGTTTAAGAC 57.135 40.909 0.00 0.00 39.99 3.01
1891 1956 8.099364 ACTAACAACCAATAACAATGACTGAG 57.901 34.615 0.00 0.00 0.00 3.35
1961 2026 2.810852 GCTGCTAAGCTGAAGTCTGTTT 59.189 45.455 0.00 0.00 46.60 2.83
2003 2068 0.764890 AGCTGGTTTCTGGCTACACA 59.235 50.000 0.00 0.00 34.31 3.72
2004 2069 1.160137 CAGCTGGTTTCTGGCTACAC 58.840 55.000 5.57 0.00 34.71 2.90
2005 2070 0.764890 ACAGCTGGTTTCTGGCTACA 59.235 50.000 19.93 0.00 35.94 2.74
2022 2087 2.361757 CAGGACCAAATTTGACTGCACA 59.638 45.455 19.86 0.00 0.00 4.57
2031 2096 8.414778 TCGTTTACAAAATACAGGACCAAATTT 58.585 29.630 0.00 0.00 0.00 1.82
2119 2184 5.482908 ACAAGCACACCAAAATACAAACAA 58.517 33.333 0.00 0.00 0.00 2.83
2120 2185 5.078411 ACAAGCACACCAAAATACAAACA 57.922 34.783 0.00 0.00 0.00 2.83
2121 2186 5.105752 TGACAAGCACACCAAAATACAAAC 58.894 37.500 0.00 0.00 0.00 2.93
2131 2196 1.142667 TGGAATCTGACAAGCACACCA 59.857 47.619 0.00 0.00 0.00 4.17
2181 2246 7.595819 AATTTCATTAAACAGACCCAGTCAA 57.404 32.000 0.00 0.00 34.60 3.18
2189 2254 9.803315 GAAAGGGGATAATTTCATTAAACAGAC 57.197 33.333 0.00 0.00 35.84 3.51
2489 2562 8.709386 ACTCTTACATCACTGTTATCAATGAC 57.291 34.615 0.00 0.00 32.66 3.06
2575 2648 7.043961 TCAACCATACTAACAACAAAATGCA 57.956 32.000 0.00 0.00 0.00 3.96
3011 3391 2.168106 TGCTTTGTCATGTTTTGCCAGT 59.832 40.909 0.00 0.00 0.00 4.00
3035 3415 3.539604 GATGAATGGGTGAGGTTGAGAG 58.460 50.000 0.00 0.00 0.00 3.20
3058 3438 7.452880 TCCTCAACTGTTGGAATAAATTCAG 57.547 36.000 19.55 6.20 38.53 3.02
3145 3525 4.585162 ACAGGAAGATATCTGGGTACTTCG 59.415 45.833 5.86 0.00 38.13 3.79
3214 3594 8.753175 CACCGAAAATACTGCTAGATTTAGTAC 58.247 37.037 0.00 0.00 30.47 2.73
3436 3817 9.071276 AGAGCAGAGAAAACAGATTAAATTTCA 57.929 29.630 0.00 0.00 34.91 2.69
3492 3873 4.918810 AACGCCTGAAAAAGATGAAGTT 57.081 36.364 0.00 0.00 0.00 2.66
3501 3882 4.545610 CATCTTGCTTAACGCCTGAAAAA 58.454 39.130 0.00 0.00 38.05 1.94
3576 3957 2.279582 TGATCTTTCGACGCTTCCTC 57.720 50.000 0.00 0.00 0.00 3.71
3612 3993 0.035317 TCTTGTGCCAGCGAACATCT 59.965 50.000 0.00 0.00 0.00 2.90
3655 4036 1.843368 CCAAGGTGCTGTCCATCAAT 58.157 50.000 0.00 0.00 0.00 2.57
3747 4128 5.046087 CCCAGTGCCTAGATGATATTGATGA 60.046 44.000 0.00 0.00 0.00 2.92
3861 4242 4.455533 GCAACTGTAGTTTCCATCACATCA 59.544 41.667 0.00 0.00 35.83 3.07
3887 4268 3.205507 AGGGAGGTCAGTAAGATCTGCTA 59.794 47.826 0.00 0.00 44.55 3.49
4055 4436 9.982651 ACTAGAACGTACAATGCATAGAAATAT 57.017 29.630 0.00 0.00 0.00 1.28
4070 4451 6.305160 GCTAACTCAACTTGACTAGAACGTAC 59.695 42.308 0.00 0.00 0.00 3.67
4138 4519 6.238842 CCATTTTCCTGCATATCAGTTACTGG 60.239 42.308 12.79 0.00 41.25 4.00
4140 4521 6.662755 TCCATTTTCCTGCATATCAGTTACT 58.337 36.000 0.00 0.00 41.25 2.24
4161 4542 7.669304 TCTTCCATGTTTATTTCACAATCTCCA 59.331 33.333 0.00 0.00 0.00 3.86
4179 4560 3.928727 TCAGCAGCTTTTTCTTCCATG 57.071 42.857 0.00 0.00 0.00 3.66
4210 4591 5.455326 CGGGTTTTTCAGAGGATGGATAGAT 60.455 44.000 0.00 0.00 0.00 1.98
4251 4632 4.445452 CAAGTTTGGATCTTGTGATGGG 57.555 45.455 0.00 0.00 37.90 4.00
4338 4719 0.884514 TCTGACTCTGCAGGAACTCG 59.115 55.000 15.13 0.00 34.60 4.18
4380 4761 0.813821 GAGGCTTGATCAAACCTGGC 59.186 55.000 30.49 20.05 30.95 4.85
4388 4769 2.586245 CCAGGCGAGGCTTGATCA 59.414 61.111 5.76 0.00 37.87 2.92
4487 4868 3.638160 AGCATTGTTTTCAGGCTCAAGAA 59.362 39.130 0.00 0.00 37.61 2.52
4550 4931 2.362077 GTCAACAAACTGCATGAGGGTT 59.638 45.455 0.00 0.00 0.00 4.11
4672 5053 0.109272 GAGACGACGTCAATCAGCCA 60.109 55.000 28.31 0.00 34.60 4.75
4715 5096 1.200948 GTTTCTTCATGAGCAGGGTGC 59.799 52.381 0.00 0.00 45.46 5.01
4716 5097 2.507484 TGTTTCTTCATGAGCAGGGTG 58.493 47.619 0.00 0.00 0.00 4.61
4724 5105 3.756434 GGGTTTCGGATGTTTCTTCATGA 59.244 43.478 0.00 0.00 0.00 3.07
4793 5174 3.317711 CACCACATAGCTGAAAACCACAA 59.682 43.478 0.00 0.00 0.00 3.33
4834 5234 2.353323 GGGTTACAACTCGGATTCACC 58.647 52.381 0.00 0.00 0.00 4.02
4843 5243 0.605589 AAGCTGGCGGGTTACAACTC 60.606 55.000 9.40 0.00 33.49 3.01
4844 5244 0.688487 TAAGCTGGCGGGTTACAACT 59.312 50.000 13.68 0.00 36.91 3.16
4845 5245 1.198408 GTTAAGCTGGCGGGTTACAAC 59.802 52.381 17.03 12.00 37.58 3.32
4846 5246 1.202782 TGTTAAGCTGGCGGGTTACAA 60.203 47.619 17.03 3.49 37.58 2.41
4847 5247 0.397187 TGTTAAGCTGGCGGGTTACA 59.603 50.000 17.03 14.66 37.58 2.41
4848 5248 1.400494 CATGTTAAGCTGGCGGGTTAC 59.600 52.381 17.03 12.56 37.58 2.50
4849 5249 1.003812 ACATGTTAAGCTGGCGGGTTA 59.996 47.619 13.68 13.68 36.91 2.85
4854 5254 0.456653 GCCAACATGTTAAGCTGGCG 60.457 55.000 19.79 2.51 42.86 5.69
4865 5265 3.133691 ACTCATATACAGCGCCAACATG 58.866 45.455 2.29 0.00 0.00 3.21
4867 5267 2.798145 CGACTCATATACAGCGCCAACA 60.798 50.000 2.29 0.00 0.00 3.33
4874 5274 1.269102 ACACGCCGACTCATATACAGC 60.269 52.381 0.00 0.00 0.00 4.40
4890 5290 4.263677 GCAATTCATCAGTGCATAAACACG 59.736 41.667 0.00 0.00 45.45 4.49
4936 5337 3.691609 CACCTTCTGGCCTTCTTCATAAC 59.308 47.826 3.32 0.00 36.63 1.89
4998 5399 0.392863 ACGCATGCTGCCAGACATAA 60.393 50.000 17.13 0.00 41.12 1.90
5017 5418 7.396055 AGGCAGCTAATCCTTACAATTTACAAA 59.604 33.333 0.00 0.00 0.00 2.83
5085 5486 5.686159 CTGAAGAAAAACTCATCAGCACT 57.314 39.130 0.00 0.00 41.57 4.40
5129 5531 4.807834 ACGCATCATCATTAGACAACTCAG 59.192 41.667 0.00 0.00 0.00 3.35
5235 5637 2.154462 CTTGCACGAAATTCTCACCCT 58.846 47.619 0.00 0.00 0.00 4.34
5466 5869 1.164041 CGGCTGTGAACGTTTCCCTT 61.164 55.000 0.46 0.00 0.00 3.95
5467 5870 1.597027 CGGCTGTGAACGTTTCCCT 60.597 57.895 0.46 0.00 0.00 4.20
5468 5871 2.613506 CCGGCTGTGAACGTTTCCC 61.614 63.158 0.46 0.00 0.00 3.97
5469 5872 1.838568 GACCGGCTGTGAACGTTTCC 61.839 60.000 0.00 0.00 0.00 3.13
5470 5873 1.568025 GACCGGCTGTGAACGTTTC 59.432 57.895 0.00 0.00 0.00 2.78
5471 5874 2.241880 CGACCGGCTGTGAACGTTT 61.242 57.895 0.00 0.00 0.00 3.60
5472 5875 2.660552 CGACCGGCTGTGAACGTT 60.661 61.111 0.00 0.00 0.00 3.99
5473 5876 3.598715 TCGACCGGCTGTGAACGT 61.599 61.111 0.00 0.00 0.00 3.99
5474 5877 3.103911 GTCGACCGGCTGTGAACG 61.104 66.667 3.51 0.00 0.00 3.95
5475 5878 2.737376 GGTCGACCGGCTGTGAAC 60.737 66.667 20.85 0.00 0.00 3.18
5486 5889 4.681978 AACAGGCAGCCGGTCGAC 62.682 66.667 18.45 7.13 29.06 4.20
5487 5890 4.373116 GAACAGGCAGCCGGTCGA 62.373 66.667 18.45 0.00 29.06 4.20
5524 5927 4.569023 TAGATGACCTGGCGCGCG 62.569 66.667 28.44 28.44 0.00 6.86
5525 5928 2.659897 CTAGATGACCTGGCGCGC 60.660 66.667 25.94 25.94 0.00 6.86
5526 5929 2.028190 CCTAGATGACCTGGCGCG 59.972 66.667 0.00 0.00 0.00 6.86
5527 5930 1.227380 CACCTAGATGACCTGGCGC 60.227 63.158 0.00 0.00 0.00 6.53
5528 5931 1.443407 CCACCTAGATGACCTGGCG 59.557 63.158 0.00 0.00 0.00 5.69
5529 5932 1.832912 CCCACCTAGATGACCTGGC 59.167 63.158 0.00 0.00 0.00 4.85
5530 5933 1.700042 GGCCCACCTAGATGACCTGG 61.700 65.000 0.00 0.00 0.00 4.45
5531 5934 1.832912 GGCCCACCTAGATGACCTG 59.167 63.158 0.00 0.00 0.00 4.00
5532 5935 1.762460 CGGCCCACCTAGATGACCT 60.762 63.158 0.00 0.00 0.00 3.85
5533 5936 2.822399 CGGCCCACCTAGATGACC 59.178 66.667 0.00 0.00 0.00 4.02
5534 5937 2.109181 GCGGCCCACCTAGATGAC 59.891 66.667 0.00 0.00 0.00 3.06
5535 5938 2.364973 TGCGGCCCACCTAGATGA 60.365 61.111 0.00 0.00 0.00 2.92
5536 5939 2.203070 GTGCGGCCCACCTAGATG 60.203 66.667 12.03 0.00 38.55 2.90
5537 5940 3.849951 CGTGCGGCCCACCTAGAT 61.850 66.667 15.98 0.00 41.53 1.98
5554 5957 3.129913 GATGGGGATGCGCTGTTGC 62.130 63.158 9.73 0.00 0.00 4.17
5555 5958 2.484062 GGATGGGGATGCGCTGTTG 61.484 63.158 9.73 0.00 0.00 3.33
5556 5959 2.124151 GGATGGGGATGCGCTGTT 60.124 61.111 9.73 0.00 0.00 3.16
5557 5960 1.344953 TAAGGATGGGGATGCGCTGT 61.345 55.000 9.73 0.00 0.00 4.40
5558 5961 0.037303 ATAAGGATGGGGATGCGCTG 59.963 55.000 9.73 0.00 0.00 5.18
5559 5962 0.326264 GATAAGGATGGGGATGCGCT 59.674 55.000 9.73 0.00 0.00 5.92
5560 5963 0.678048 GGATAAGGATGGGGATGCGC 60.678 60.000 0.00 0.00 0.00 6.09
5561 5964 0.987294 AGGATAAGGATGGGGATGCG 59.013 55.000 0.00 0.00 0.00 4.73
5562 5965 4.476479 AGATAAGGATAAGGATGGGGATGC 59.524 45.833 0.00 0.00 0.00 3.91
5563 5966 6.446434 AGAAGATAAGGATAAGGATGGGGATG 59.554 42.308 0.00 0.00 0.00 3.51
5564 5967 6.588794 AGAAGATAAGGATAAGGATGGGGAT 58.411 40.000 0.00 0.00 0.00 3.85
5565 5968 5.994629 AGAAGATAAGGATAAGGATGGGGA 58.005 41.667 0.00 0.00 0.00 4.81
5566 5969 6.710499 AAGAAGATAAGGATAAGGATGGGG 57.290 41.667 0.00 0.00 0.00 4.96
5567 5970 9.898152 GATAAAGAAGATAAGGATAAGGATGGG 57.102 37.037 0.00 0.00 0.00 4.00
5578 5981 9.500785 GGATTCCAGAAGATAAAGAAGATAAGG 57.499 37.037 0.00 0.00 0.00 2.69
5579 5982 9.500785 GGGATTCCAGAAGATAAAGAAGATAAG 57.499 37.037 4.80 0.00 0.00 1.73
5580 5983 8.440771 GGGGATTCCAGAAGATAAAGAAGATAA 58.559 37.037 4.80 0.00 35.00 1.75
5581 5984 7.796637 AGGGGATTCCAGAAGATAAAGAAGATA 59.203 37.037 4.80 0.00 38.24 1.98
5582 5985 6.623183 AGGGGATTCCAGAAGATAAAGAAGAT 59.377 38.462 4.80 0.00 38.24 2.40
5583 5986 5.973124 AGGGGATTCCAGAAGATAAAGAAGA 59.027 40.000 4.80 0.00 38.24 2.87
5584 5987 6.259346 AGGGGATTCCAGAAGATAAAGAAG 57.741 41.667 4.80 0.00 38.24 2.85
5585 5988 5.163301 CGAGGGGATTCCAGAAGATAAAGAA 60.163 44.000 4.80 0.00 38.24 2.52
5586 5989 4.345257 CGAGGGGATTCCAGAAGATAAAGA 59.655 45.833 4.80 0.00 38.24 2.52
5587 5990 4.101741 ACGAGGGGATTCCAGAAGATAAAG 59.898 45.833 4.80 0.00 38.24 1.85
5588 5991 4.037927 ACGAGGGGATTCCAGAAGATAAA 58.962 43.478 4.80 0.00 38.24 1.40
5589 5992 3.641906 GACGAGGGGATTCCAGAAGATAA 59.358 47.826 4.80 0.00 38.24 1.75
5590 5993 3.231818 GACGAGGGGATTCCAGAAGATA 58.768 50.000 4.80 0.00 38.24 1.98
5591 5994 2.043227 GACGAGGGGATTCCAGAAGAT 58.957 52.381 4.80 0.00 38.24 2.40
5592 5995 1.486211 GACGAGGGGATTCCAGAAGA 58.514 55.000 4.80 0.00 38.24 2.87
5593 5996 0.466124 GGACGAGGGGATTCCAGAAG 59.534 60.000 4.80 0.00 38.24 2.85
5594 5997 0.252513 TGGACGAGGGGATTCCAGAA 60.253 55.000 4.80 0.00 34.35 3.02
5595 5998 0.976073 GTGGACGAGGGGATTCCAGA 60.976 60.000 4.80 0.00 40.16 3.86
5596 5999 0.978146 AGTGGACGAGGGGATTCCAG 60.978 60.000 4.80 0.00 40.16 3.86
5597 6000 0.976073 GAGTGGACGAGGGGATTCCA 60.976 60.000 4.80 0.00 37.07 3.53
5598 6001 1.823976 GAGTGGACGAGGGGATTCC 59.176 63.158 0.00 0.00 0.00 3.01
5599 6002 1.321074 ACGAGTGGACGAGGGGATTC 61.321 60.000 0.00 0.00 37.03 2.52
5600 6003 0.903454 AACGAGTGGACGAGGGGATT 60.903 55.000 0.00 0.00 37.03 3.01
5601 6004 1.305046 AACGAGTGGACGAGGGGAT 60.305 57.895 0.00 0.00 37.03 3.85
5602 6005 1.975407 GAACGAGTGGACGAGGGGA 60.975 63.158 0.00 0.00 37.03 4.81
5603 6006 1.935327 GAGAACGAGTGGACGAGGGG 61.935 65.000 0.00 0.00 37.03 4.79
5604 6007 0.961358 AGAGAACGAGTGGACGAGGG 60.961 60.000 0.00 0.00 37.03 4.30
5605 6008 0.882474 AAGAGAACGAGTGGACGAGG 59.118 55.000 0.00 0.00 37.03 4.63
5606 6009 1.135632 GGAAGAGAACGAGTGGACGAG 60.136 57.143 0.00 0.00 37.03 4.18
5607 6010 0.879765 GGAAGAGAACGAGTGGACGA 59.120 55.000 0.00 0.00 37.03 4.20
5608 6011 0.596577 TGGAAGAGAACGAGTGGACG 59.403 55.000 0.00 0.00 39.31 4.79
5609 6012 1.670380 GCTGGAAGAGAACGAGTGGAC 60.670 57.143 0.00 0.00 34.07 4.02
5610 6013 0.603569 GCTGGAAGAGAACGAGTGGA 59.396 55.000 0.00 0.00 34.07 4.02
5611 6014 0.318441 TGCTGGAAGAGAACGAGTGG 59.682 55.000 0.00 0.00 34.07 4.00
5612 6015 1.707632 CTGCTGGAAGAGAACGAGTG 58.292 55.000 0.00 0.00 34.07 3.51
5613 6016 0.037790 GCTGCTGGAAGAGAACGAGT 60.038 55.000 0.00 0.00 34.07 4.18
5614 6017 0.246086 AGCTGCTGGAAGAGAACGAG 59.754 55.000 0.00 0.00 34.07 4.18
5615 6018 0.244994 GAGCTGCTGGAAGAGAACGA 59.755 55.000 7.01 0.00 34.07 3.85
5616 6019 0.246086 AGAGCTGCTGGAAGAGAACG 59.754 55.000 7.01 0.00 34.07 3.95
5617 6020 2.028203 AGAAGAGCTGCTGGAAGAGAAC 60.028 50.000 7.01 0.00 34.07 3.01
5618 6021 2.233431 GAGAAGAGCTGCTGGAAGAGAA 59.767 50.000 7.01 0.00 34.07 2.87
5619 6022 1.824230 GAGAAGAGCTGCTGGAAGAGA 59.176 52.381 7.01 0.00 34.07 3.10
5620 6023 1.826720 AGAGAAGAGCTGCTGGAAGAG 59.173 52.381 7.01 0.00 34.07 2.85
5621 6024 1.824230 GAGAGAAGAGCTGCTGGAAGA 59.176 52.381 7.01 0.00 34.07 2.87
5622 6025 1.134729 GGAGAGAAGAGCTGCTGGAAG 60.135 57.143 7.01 0.00 0.00 3.46
5623 6026 0.901124 GGAGAGAAGAGCTGCTGGAA 59.099 55.000 7.01 0.00 0.00 3.53
5624 6027 0.975040 GGGAGAGAAGAGCTGCTGGA 60.975 60.000 7.01 0.00 0.00 3.86
5625 6028 0.977108 AGGGAGAGAAGAGCTGCTGG 60.977 60.000 7.01 0.00 0.00 4.85
5626 6029 0.461135 GAGGGAGAGAAGAGCTGCTG 59.539 60.000 7.01 0.00 0.00 4.41
5627 6030 1.037030 CGAGGGAGAGAAGAGCTGCT 61.037 60.000 0.00 0.00 0.00 4.24
5628 6031 1.319614 ACGAGGGAGAGAAGAGCTGC 61.320 60.000 0.00 0.00 0.00 5.25
5629 6032 0.738389 GACGAGGGAGAGAAGAGCTG 59.262 60.000 0.00 0.00 0.00 4.24
5630 6033 0.623723 AGACGAGGGAGAGAAGAGCT 59.376 55.000 0.00 0.00 0.00 4.09
5631 6034 0.738389 CAGACGAGGGAGAGAAGAGC 59.262 60.000 0.00 0.00 0.00 4.09
5632 6035 2.411628 TCAGACGAGGGAGAGAAGAG 57.588 55.000 0.00 0.00 0.00 2.85
5633 6036 2.881111 TTCAGACGAGGGAGAGAAGA 57.119 50.000 0.00 0.00 0.00 2.87
5634 6037 3.085533 TCTTTCAGACGAGGGAGAGAAG 58.914 50.000 0.00 0.00 0.00 2.85
5635 6038 3.156288 TCTTTCAGACGAGGGAGAGAA 57.844 47.619 0.00 0.00 0.00 2.87
5636 6039 2.881111 TCTTTCAGACGAGGGAGAGA 57.119 50.000 0.00 0.00 0.00 3.10
5637 6040 3.005897 TGTTTCTTTCAGACGAGGGAGAG 59.994 47.826 0.00 0.00 0.00 3.20
5638 6041 2.963101 TGTTTCTTTCAGACGAGGGAGA 59.037 45.455 0.00 0.00 0.00 3.71
5639 6042 3.060602 GTGTTTCTTTCAGACGAGGGAG 58.939 50.000 0.00 0.00 0.00 4.30
5640 6043 2.224209 GGTGTTTCTTTCAGACGAGGGA 60.224 50.000 0.00 0.00 0.00 4.20
5641 6044 2.143925 GGTGTTTCTTTCAGACGAGGG 58.856 52.381 0.00 0.00 0.00 4.30
5642 6045 2.544267 GTGGTGTTTCTTTCAGACGAGG 59.456 50.000 0.00 0.00 0.00 4.63
5643 6046 3.458189 AGTGGTGTTTCTTTCAGACGAG 58.542 45.455 0.00 0.00 0.00 4.18
5644 6047 3.132289 AGAGTGGTGTTTCTTTCAGACGA 59.868 43.478 0.00 0.00 0.00 4.20
5645 6048 3.246226 CAGAGTGGTGTTTCTTTCAGACG 59.754 47.826 0.00 0.00 0.00 4.18
5646 6049 3.002759 GCAGAGTGGTGTTTCTTTCAGAC 59.997 47.826 0.00 0.00 0.00 3.51
5647 6050 3.206150 GCAGAGTGGTGTTTCTTTCAGA 58.794 45.455 0.00 0.00 0.00 3.27
5648 6051 2.291741 GGCAGAGTGGTGTTTCTTTCAG 59.708 50.000 0.00 0.00 0.00 3.02
5649 6052 2.297701 GGCAGAGTGGTGTTTCTTTCA 58.702 47.619 0.00 0.00 0.00 2.69
5650 6053 2.297701 TGGCAGAGTGGTGTTTCTTTC 58.702 47.619 0.00 0.00 0.00 2.62
5651 6054 2.435372 TGGCAGAGTGGTGTTTCTTT 57.565 45.000 0.00 0.00 0.00 2.52
5652 6055 2.233271 CATGGCAGAGTGGTGTTTCTT 58.767 47.619 0.00 0.00 0.00 2.52
5653 6056 1.546323 CCATGGCAGAGTGGTGTTTCT 60.546 52.381 0.00 0.00 0.00 2.52
5654 6057 0.883833 CCATGGCAGAGTGGTGTTTC 59.116 55.000 0.00 0.00 0.00 2.78
5655 6058 0.478072 TCCATGGCAGAGTGGTGTTT 59.522 50.000 6.96 0.00 36.84 2.83
5656 6059 0.700564 ATCCATGGCAGAGTGGTGTT 59.299 50.000 6.96 0.00 36.84 3.32
5657 6060 0.700564 AATCCATGGCAGAGTGGTGT 59.299 50.000 6.96 0.00 36.84 4.16
5658 6061 1.475280 CAAATCCATGGCAGAGTGGTG 59.525 52.381 6.96 0.00 36.84 4.17
5659 6062 1.843368 CAAATCCATGGCAGAGTGGT 58.157 50.000 6.96 0.00 36.84 4.16
5660 6063 0.458669 GCAAATCCATGGCAGAGTGG 59.541 55.000 6.96 0.00 36.82 4.00
5661 6064 1.471119 AGCAAATCCATGGCAGAGTG 58.529 50.000 6.96 1.65 0.00 3.51
5662 6065 1.822990 CAAGCAAATCCATGGCAGAGT 59.177 47.619 6.96 0.00 0.00 3.24
5663 6066 2.579207 CAAGCAAATCCATGGCAGAG 57.421 50.000 6.96 0.00 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.