Multiple sequence alignment - TraesCS7B01G113600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G113600 chr7B 100.000 6227 0 0 1 6227 131941457 131947683 0.000000e+00 11500.0
1 TraesCS7B01G113600 chr7B 82.288 271 39 7 5960 6227 131956602 131956866 6.280000e-55 226.0
2 TraesCS7B01G113600 chr7B 80.000 110 16 4 2362 2470 369050682 369050786 6.690000e-10 76.8
3 TraesCS7B01G113600 chr7A 90.997 2166 124 39 4109 6227 169024087 169026228 0.000000e+00 2854.0
4 TraesCS7B01G113600 chr7A 92.186 1766 77 26 404 2148 169019941 169021666 0.000000e+00 2440.0
5 TraesCS7B01G113600 chr7A 91.459 281 15 3 123 402 169019386 169019658 1.640000e-100 377.0
6 TraesCS7B01G113600 chr7A 90.625 288 17 3 2467 2745 169021826 169022112 2.120000e-99 374.0
7 TraesCS7B01G113600 chr7A 78.173 197 26 6 2764 2951 169022097 169022285 6.600000e-20 110.0
8 TraesCS7B01G113600 chr7A 95.000 40 2 0 3050 3089 169022437 169022476 5.210000e-06 63.9
9 TraesCS7B01G113600 chr7D 90.179 2179 100 40 1 2148 167526455 167528550 0.000000e+00 2734.0
10 TraesCS7B01G113600 chr7D 92.593 1701 111 12 3853 5541 167529274 167530971 0.000000e+00 2429.0
11 TraesCS7B01G113600 chr7D 90.217 736 62 8 3086 3812 580805976 580806710 0.000000e+00 952.0
12 TraesCS7B01G113600 chr7D 90.682 719 31 11 5540 6227 167531199 167531912 0.000000e+00 924.0
13 TraesCS7B01G113600 chr7D 88.690 725 69 10 3094 3808 621777532 621778253 0.000000e+00 872.0
14 TraesCS7B01G113600 chr7D 91.018 334 14 7 5224 5541 167530827 167531160 2.670000e-118 436.0
15 TraesCS7B01G113600 chr7D 93.380 287 11 1 2467 2745 167528720 167529006 9.650000e-113 418.0
16 TraesCS7B01G113600 chr7D 82.657 271 38 7 5960 6227 167550862 167551126 1.350000e-56 231.0
17 TraesCS7B01G113600 chr7D 85.714 231 12 9 2764 2973 167528991 167529221 2.260000e-54 224.0
18 TraesCS7B01G113600 chr7D 84.783 184 12 5 5224 5391 167531016 167531199 2.980000e-38 171.0
19 TraesCS7B01G113600 chr7D 93.243 74 5 0 2285 2358 167528563 167528636 6.600000e-20 110.0
20 TraesCS7B01G113600 chr7D 97.619 42 0 1 3039 3079 167529233 167529274 3.110000e-08 71.3
21 TraesCS7B01G113600 chr1D 89.252 735 68 8 3088 3812 13854620 13855353 0.000000e+00 909.0
22 TraesCS7B01G113600 chr1D 88.243 740 69 15 3088 3812 14002814 14003550 0.000000e+00 869.0
23 TraesCS7B01G113600 chr1D 76.153 629 94 39 4396 4996 349255021 349255621 4.750000e-71 279.0
24 TraesCS7B01G113600 chr1D 83.871 124 10 7 2351 2473 63635328 63635442 6.600000e-20 110.0
25 TraesCS7B01G113600 chr5B 89.222 733 69 6 3091 3814 704162809 704163540 0.000000e+00 907.0
26 TraesCS7B01G113600 chr5B 87.966 698 70 9 3088 3774 655704581 655705275 0.000000e+00 811.0
27 TraesCS7B01G113600 chr2D 89.344 732 65 9 3091 3812 432877072 432876344 0.000000e+00 907.0
28 TraesCS7B01G113600 chr3D 89.101 734 67 8 3088 3812 557872882 557873611 0.000000e+00 900.0
29 TraesCS7B01G113600 chr3D 88.291 743 76 7 3086 3819 604827401 604826661 0.000000e+00 880.0
30 TraesCS7B01G113600 chr1B 75.923 623 106 34 4396 4996 470912663 470913263 4.750000e-71 279.0
31 TraesCS7B01G113600 chr1A 75.684 621 107 35 4398 4996 449624988 449625586 2.860000e-68 270.0
32 TraesCS7B01G113600 chr5A 87.952 83 5 3 2359 2440 580453648 580453570 6.650000e-15 93.5
33 TraesCS7B01G113600 chr2A 81.513 119 11 9 2353 2468 469789791 469789681 3.090000e-13 87.9
34 TraesCS7B01G113600 chr2B 79.825 114 16 5 2359 2470 460439559 460439667 6.690000e-10 76.8
35 TraesCS7B01G113600 chr2B 84.416 77 10 2 2395 2470 501613092 501613167 2.410000e-09 75.0
36 TraesCS7B01G113600 chr4B 84.416 77 10 2 2395 2470 97304983 97305058 2.410000e-09 75.0
37 TraesCS7B01G113600 chr6D 93.750 48 3 0 2422 2469 85797539 85797492 8.660000e-09 73.1
38 TraesCS7B01G113600 chr6A 93.750 48 3 0 2422 2469 103000174 103000127 8.660000e-09 73.1
39 TraesCS7B01G113600 chr5D 79.798 99 12 7 2375 2471 444710172 444710080 1.450000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G113600 chr7B 131941457 131947683 6226 False 11500.000000 11500 100.000000 1 6227 1 chr7B.!!$F1 6226
1 TraesCS7B01G113600 chr7A 169019386 169026228 6842 False 1036.483333 2854 89.740000 123 6227 6 chr7A.!!$F1 6104
2 TraesCS7B01G113600 chr7D 580805976 580806710 734 False 952.000000 952 90.217000 3086 3812 1 chr7D.!!$F2 726
3 TraesCS7B01G113600 chr7D 621777532 621778253 721 False 872.000000 872 88.690000 3094 3808 1 chr7D.!!$F3 714
4 TraesCS7B01G113600 chr7D 167526455 167531912 5457 False 835.255556 2734 91.023444 1 6227 9 chr7D.!!$F4 6226
5 TraesCS7B01G113600 chr1D 13854620 13855353 733 False 909.000000 909 89.252000 3088 3812 1 chr1D.!!$F1 724
6 TraesCS7B01G113600 chr1D 14002814 14003550 736 False 869.000000 869 88.243000 3088 3812 1 chr1D.!!$F2 724
7 TraesCS7B01G113600 chr1D 349255021 349255621 600 False 279.000000 279 76.153000 4396 4996 1 chr1D.!!$F4 600
8 TraesCS7B01G113600 chr5B 704162809 704163540 731 False 907.000000 907 89.222000 3091 3814 1 chr5B.!!$F2 723
9 TraesCS7B01G113600 chr5B 655704581 655705275 694 False 811.000000 811 87.966000 3088 3774 1 chr5B.!!$F1 686
10 TraesCS7B01G113600 chr2D 432876344 432877072 728 True 907.000000 907 89.344000 3091 3812 1 chr2D.!!$R1 721
11 TraesCS7B01G113600 chr3D 557872882 557873611 729 False 900.000000 900 89.101000 3088 3812 1 chr3D.!!$F1 724
12 TraesCS7B01G113600 chr3D 604826661 604827401 740 True 880.000000 880 88.291000 3086 3819 1 chr3D.!!$R1 733
13 TraesCS7B01G113600 chr1B 470912663 470913263 600 False 279.000000 279 75.923000 4396 4996 1 chr1B.!!$F1 600
14 TraesCS7B01G113600 chr1A 449624988 449625586 598 False 270.000000 270 75.684000 4398 4996 1 chr1A.!!$F1 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 1189 0.248843 GCCTCAGAGCTTGCAGTAGT 59.751 55.0 0.00 0.0 0.00 2.73 F
1548 1865 0.387622 GTACGTGACGCTGGTGCTTA 60.388 55.0 4.25 0.0 36.97 3.09 F
2174 2500 0.398318 GCCTTCTGTCAACCACCTCT 59.602 55.0 0.00 0.0 0.00 3.69 F
2934 3298 0.108963 CTGTACCGAAAACCCACCCA 59.891 55.0 0.00 0.0 0.00 4.51 F
3089 3529 0.109086 CACGCTCGACACCATCTTCT 60.109 55.0 0.00 0.0 0.00 2.85 F
3977 4442 0.614812 TACCCAACTTTACCTCCGGC 59.385 55.0 0.00 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2455 2781 0.106819 TGGCTAGTACTCCCTCCGTC 60.107 60.0 0.00 0.00 0.00 4.79 R
2817 3155 0.387878 GCTATCGTCCCATCTCAGCG 60.388 60.0 0.00 0.00 0.00 5.18 R
4058 4539 0.249911 GGGTGACGTGGGATCATAGC 60.250 60.0 0.00 0.00 0.00 2.97 R
4329 6175 0.508213 TGATAATTGCTGCGCGATCG 59.492 50.0 12.10 11.69 30.45 3.69 R
4341 6187 0.529119 GGTCGCCGTCGGTGATAATT 60.529 55.0 28.90 0.00 44.40 1.40 R
5267 7119 0.533755 GCTAGGCCAGTACCTGCATG 60.534 60.0 5.01 0.00 41.34 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 6.516739 TGCATCGAGGTTCTCTATTATAGG 57.483 41.667 0.00 0.00 0.00 2.57
89 90 8.961634 CATCGAGGTTCTCTATTATAGGAATCA 58.038 37.037 12.69 0.00 0.00 2.57
180 181 7.857389 GCTTTATTGATTATGATGAACAGCGAA 59.143 33.333 0.00 0.00 0.00 4.70
181 182 9.162793 CTTTATTGATTATGATGAACAGCGAAC 57.837 33.333 0.00 0.00 0.00 3.95
242 245 8.725148 CAGCCAGGAACATCTCATTAATATAAC 58.275 37.037 0.00 0.00 0.00 1.89
318 322 3.686726 GCATCCTGAGACTAACCAAACAG 59.313 47.826 0.00 0.00 0.00 3.16
396 400 7.088589 ACATTATTTCCATCTTTCAAGGACG 57.911 36.000 0.00 0.00 0.00 4.79
463 748 8.826710 TGTAATATTTAGAATTTGCAGTCCTCG 58.173 33.333 0.00 0.00 0.00 4.63
479 764 5.297029 CAGTCCTCGAACTCCTTTTTCTTTT 59.703 40.000 0.00 0.00 0.00 2.27
523 808 7.148340 CGATATCATCCATTTCTTTAGCCCTTC 60.148 40.741 3.12 0.00 0.00 3.46
529 814 2.053747 TTCTTTAGCCCTTCCCCTCA 57.946 50.000 0.00 0.00 0.00 3.86
547 832 5.163152 CCCCTCAAATGAATAACTAGCTCCT 60.163 44.000 0.00 0.00 0.00 3.69
554 839 4.610333 TGAATAACTAGCTCCTCCACTCA 58.390 43.478 0.00 0.00 0.00 3.41
556 841 5.663106 TGAATAACTAGCTCCTCCACTCATT 59.337 40.000 0.00 0.00 0.00 2.57
557 842 3.902881 AACTAGCTCCTCCACTCATTG 57.097 47.619 0.00 0.00 0.00 2.82
558 843 1.484240 ACTAGCTCCTCCACTCATTGC 59.516 52.381 0.00 0.00 0.00 3.56
560 845 0.990374 AGCTCCTCCACTCATTGCTT 59.010 50.000 0.00 0.00 0.00 3.91
561 846 2.191400 AGCTCCTCCACTCATTGCTTA 58.809 47.619 0.00 0.00 0.00 3.09
564 849 3.314635 GCTCCTCCACTCATTGCTTATTG 59.685 47.826 0.00 0.00 0.00 1.90
565 850 3.282021 TCCTCCACTCATTGCTTATTGC 58.718 45.455 0.00 0.00 43.25 3.56
567 852 2.360165 CTCCACTCATTGCTTATTGCCC 59.640 50.000 0.00 0.00 42.00 5.36
568 853 2.101783 CCACTCATTGCTTATTGCCCA 58.898 47.619 0.00 0.00 42.00 5.36
570 855 3.243636 CCACTCATTGCTTATTGCCCATC 60.244 47.826 0.00 0.00 42.00 3.51
571 856 3.382227 CACTCATTGCTTATTGCCCATCA 59.618 43.478 0.00 0.00 42.00 3.07
572 857 3.635373 ACTCATTGCTTATTGCCCATCAG 59.365 43.478 0.00 0.00 42.00 2.90
573 858 3.887110 CTCATTGCTTATTGCCCATCAGA 59.113 43.478 0.00 0.00 42.00 3.27
574 859 4.476297 TCATTGCTTATTGCCCATCAGAT 58.524 39.130 0.00 0.00 42.00 2.90
575 860 5.633117 TCATTGCTTATTGCCCATCAGATA 58.367 37.500 0.00 0.00 42.00 1.98
576 861 6.250711 TCATTGCTTATTGCCCATCAGATAT 58.749 36.000 0.00 0.00 42.00 1.63
577 862 6.722590 TCATTGCTTATTGCCCATCAGATATT 59.277 34.615 0.00 0.00 42.00 1.28
578 863 6.579666 TTGCTTATTGCCCATCAGATATTC 57.420 37.500 0.00 0.00 42.00 1.75
579 864 5.633117 TGCTTATTGCCCATCAGATATTCA 58.367 37.500 0.00 0.00 42.00 2.57
580 865 6.250711 TGCTTATTGCCCATCAGATATTCAT 58.749 36.000 0.00 0.00 42.00 2.57
581 866 7.404481 TGCTTATTGCCCATCAGATATTCATA 58.596 34.615 0.00 0.00 42.00 2.15
582 867 8.057011 TGCTTATTGCCCATCAGATATTCATAT 58.943 33.333 0.00 0.00 42.00 1.78
583 868 8.910944 GCTTATTGCCCATCAGATATTCATATT 58.089 33.333 0.00 0.00 35.15 1.28
624 914 1.905215 CCTGTTCCAGTCCATCTCAGT 59.095 52.381 0.00 0.00 0.00 3.41
652 942 2.188994 CCTGCCACTGCCTAGCTC 59.811 66.667 0.00 0.00 36.33 4.09
705 995 0.250901 ACACATGTGAAGTCCCCAGC 60.251 55.000 31.94 0.00 0.00 4.85
740 1030 7.335924 CCTAGTTCGGAAATGTGAAAAGGAATA 59.664 37.037 0.20 0.00 34.06 1.75
860 1150 4.394920 TCAGATTATTGTCCCGCAGTTTTC 59.605 41.667 0.00 0.00 0.00 2.29
884 1175 6.053005 CCCTATTTCGTGTAAATTAGCCTCA 58.947 40.000 0.00 0.00 38.71 3.86
890 1181 4.081642 TCGTGTAAATTAGCCTCAGAGCTT 60.082 41.667 0.00 0.00 41.41 3.74
898 1189 0.248843 GCCTCAGAGCTTGCAGTAGT 59.751 55.000 0.00 0.00 0.00 2.73
911 1211 3.427573 TGCAGTAGTAAGTCTAGTGGCA 58.572 45.455 10.41 0.00 45.33 4.92
912 1212 4.023980 TGCAGTAGTAAGTCTAGTGGCAT 58.976 43.478 10.41 0.00 45.33 4.40
925 1225 1.753848 TGGCATATGGCACTGGCAC 60.754 57.895 26.67 6.03 46.12 5.01
930 1230 1.929860 ATATGGCACTGGCACTGGCT 61.930 55.000 18.57 9.10 41.84 4.75
947 1247 3.324930 TGGCACTGGCAGCTAGCT 61.325 61.111 12.68 12.68 44.79 3.32
948 1248 2.045536 GGCACTGGCAGCTAGCTT 60.046 61.111 16.46 0.00 44.79 3.74
949 1249 1.221840 GGCACTGGCAGCTAGCTTA 59.778 57.895 16.46 3.60 44.79 3.09
993 1293 1.374631 CTGCTGCTGCTACCACGAA 60.375 57.895 17.00 0.00 40.48 3.85
995 1295 0.740868 TGCTGCTGCTACCACGAATC 60.741 55.000 17.00 0.00 40.48 2.52
1032 1338 1.737793 GTGGCTGCATGTAGTACAACC 59.262 52.381 12.66 5.18 0.00 3.77
1074 1380 1.074072 ACCACAGGCGCAACCAATA 59.926 52.632 10.83 0.00 43.14 1.90
1082 1388 2.800736 GCAACCAATAGCGGCTGG 59.199 61.111 13.86 9.08 38.77 4.85
1107 1413 1.224592 CATGGACGGGAAGAAGGGG 59.775 63.158 0.00 0.00 0.00 4.79
1193 1501 4.656731 CGAACTACTACTTCGAATTCGC 57.343 45.455 22.90 3.49 42.57 4.70
1197 1505 2.295253 ACTACTTCGAATTCGCCTGG 57.705 50.000 22.90 13.70 39.60 4.45
1220 1528 6.320164 TGGTTGCTTAAGATTAAACTGTGTGT 59.680 34.615 6.67 0.00 0.00 3.72
1222 1530 6.935741 TGCTTAAGATTAAACTGTGTGTGT 57.064 33.333 6.67 0.00 0.00 3.72
1223 1531 7.328277 TGCTTAAGATTAAACTGTGTGTGTT 57.672 32.000 6.67 0.00 0.00 3.32
1224 1532 7.192913 TGCTTAAGATTAAACTGTGTGTGTTG 58.807 34.615 6.67 0.00 0.00 3.33
1225 1533 6.636850 GCTTAAGATTAAACTGTGTGTGTTGG 59.363 38.462 6.67 0.00 0.00 3.77
1226 1534 4.568152 AGATTAAACTGTGTGTGTTGGC 57.432 40.909 0.00 0.00 0.00 4.52
1497 1814 0.433492 CTTGTTTCGCACGTAGACGG 59.567 55.000 7.04 0.00 44.95 4.79
1548 1865 0.387622 GTACGTGACGCTGGTGCTTA 60.388 55.000 4.25 0.00 36.97 3.09
2088 2414 1.380524 ACGAGAACGACGAGATGGAT 58.619 50.000 0.00 0.00 42.66 3.41
2124 2450 4.030452 GGCAAGCTCGTGCACACC 62.030 66.667 18.64 3.88 46.81 4.16
2125 2451 3.279116 GCAAGCTCGTGCACACCA 61.279 61.111 18.64 0.00 44.29 4.17
2126 2452 2.833533 GCAAGCTCGTGCACACCAA 61.834 57.895 18.64 0.00 44.29 3.67
2148 2474 3.172575 CTCAGGTACGTGCGTGCG 61.173 66.667 19.60 11.27 37.94 5.34
2150 2476 3.762992 CAGGTACGTGCGTGCGTG 61.763 66.667 17.47 17.47 45.33 5.34
2151 2477 3.968568 AGGTACGTGCGTGCGTGA 61.969 61.111 14.68 0.00 45.33 4.35
2152 2478 3.759828 GGTACGTGCGTGCGTGAC 61.760 66.667 14.68 9.47 45.33 3.67
2164 2490 3.470567 CGTGACGCGCCTTCTGTC 61.471 66.667 5.73 3.26 0.00 3.51
2165 2491 2.355837 GTGACGCGCCTTCTGTCA 60.356 61.111 5.73 10.46 40.12 3.58
2166 2492 1.954146 GTGACGCGCCTTCTGTCAA 60.954 57.895 15.19 0.00 43.58 3.18
2167 2493 1.954146 TGACGCGCCTTCTGTCAAC 60.954 57.895 5.73 0.00 39.50 3.18
2168 2494 2.665185 ACGCGCCTTCTGTCAACC 60.665 61.111 5.73 0.00 0.00 3.77
2169 2495 2.664851 CGCGCCTTCTGTCAACCA 60.665 61.111 0.00 0.00 0.00 3.67
2170 2496 2.946762 GCGCCTTCTGTCAACCAC 59.053 61.111 0.00 0.00 0.00 4.16
2171 2497 2.617274 GCGCCTTCTGTCAACCACC 61.617 63.158 0.00 0.00 0.00 4.61
2172 2498 1.071471 CGCCTTCTGTCAACCACCT 59.929 57.895 0.00 0.00 0.00 4.00
2173 2499 0.951040 CGCCTTCTGTCAACCACCTC 60.951 60.000 0.00 0.00 0.00 3.85
2174 2500 0.398318 GCCTTCTGTCAACCACCTCT 59.602 55.000 0.00 0.00 0.00 3.69
2175 2501 1.609320 GCCTTCTGTCAACCACCTCTC 60.609 57.143 0.00 0.00 0.00 3.20
2176 2502 1.002544 CCTTCTGTCAACCACCTCTCC 59.997 57.143 0.00 0.00 0.00 3.71
2177 2503 1.974236 CTTCTGTCAACCACCTCTCCT 59.026 52.381 0.00 0.00 0.00 3.69
2178 2504 2.103153 TCTGTCAACCACCTCTCCTT 57.897 50.000 0.00 0.00 0.00 3.36
2179 2505 2.408565 TCTGTCAACCACCTCTCCTTT 58.591 47.619 0.00 0.00 0.00 3.11
2180 2506 2.777692 TCTGTCAACCACCTCTCCTTTT 59.222 45.455 0.00 0.00 0.00 2.27
2181 2507 3.142174 CTGTCAACCACCTCTCCTTTTC 58.858 50.000 0.00 0.00 0.00 2.29
2182 2508 2.777692 TGTCAACCACCTCTCCTTTTCT 59.222 45.455 0.00 0.00 0.00 2.52
2183 2509 3.202151 TGTCAACCACCTCTCCTTTTCTT 59.798 43.478 0.00 0.00 0.00 2.52
2184 2510 4.207955 GTCAACCACCTCTCCTTTTCTTT 58.792 43.478 0.00 0.00 0.00 2.52
2185 2511 4.645136 GTCAACCACCTCTCCTTTTCTTTT 59.355 41.667 0.00 0.00 0.00 2.27
2186 2512 4.887655 TCAACCACCTCTCCTTTTCTTTTC 59.112 41.667 0.00 0.00 0.00 2.29
2187 2513 4.797912 ACCACCTCTCCTTTTCTTTTCT 57.202 40.909 0.00 0.00 0.00 2.52
2188 2514 5.906772 ACCACCTCTCCTTTTCTTTTCTA 57.093 39.130 0.00 0.00 0.00 2.10
2189 2515 5.870706 ACCACCTCTCCTTTTCTTTTCTAG 58.129 41.667 0.00 0.00 0.00 2.43
2190 2516 5.221945 ACCACCTCTCCTTTTCTTTTCTAGG 60.222 44.000 0.00 0.00 0.00 3.02
2191 2517 5.013183 CCACCTCTCCTTTTCTTTTCTAGGA 59.987 44.000 0.00 0.00 35.57 2.94
2198 2524 8.093659 CTCCTTTTCTTTTCTAGGAGTTCTTG 57.906 38.462 8.50 0.00 45.64 3.02
2199 2525 6.998673 TCCTTTTCTTTTCTAGGAGTTCTTGG 59.001 38.462 0.00 0.00 33.08 3.61
2200 2526 6.998673 CCTTTTCTTTTCTAGGAGTTCTTGGA 59.001 38.462 0.00 0.00 0.00 3.53
2201 2527 7.667635 CCTTTTCTTTTCTAGGAGTTCTTGGAT 59.332 37.037 0.00 0.00 0.00 3.41
2202 2528 8.622948 TTTTCTTTTCTAGGAGTTCTTGGATC 57.377 34.615 0.00 0.00 0.00 3.36
2203 2529 6.301169 TCTTTTCTAGGAGTTCTTGGATCC 57.699 41.667 4.20 4.20 0.00 3.36
2204 2530 5.189934 TCTTTTCTAGGAGTTCTTGGATCCC 59.810 44.000 9.90 0.00 33.30 3.85
2205 2531 3.776731 TCTAGGAGTTCTTGGATCCCA 57.223 47.619 9.90 0.00 33.30 4.37
2206 2532 3.647636 TCTAGGAGTTCTTGGATCCCAG 58.352 50.000 9.90 8.07 33.81 4.45
2207 2533 2.649742 AGGAGTTCTTGGATCCCAGA 57.350 50.000 11.48 11.48 33.81 3.86
2208 2534 2.921221 AGGAGTTCTTGGATCCCAGAA 58.079 47.619 21.43 21.43 33.81 3.02
2209 2535 3.468850 AGGAGTTCTTGGATCCCAGAAT 58.531 45.455 26.33 16.99 33.81 2.40
2210 2536 3.854994 AGGAGTTCTTGGATCCCAGAATT 59.145 43.478 26.33 23.05 33.81 2.17
2211 2537 4.080072 AGGAGTTCTTGGATCCCAGAATTC 60.080 45.833 29.09 29.09 33.81 2.17
2212 2538 4.203226 GAGTTCTTGGATCCCAGAATTCC 58.797 47.826 27.79 17.94 33.81 3.01
2213 2539 3.053320 AGTTCTTGGATCCCAGAATTCCC 60.053 47.826 26.33 15.80 33.81 3.97
2214 2540 2.863884 TCTTGGATCCCAGAATTCCCT 58.136 47.619 13.07 0.00 33.81 4.20
2215 2541 3.201363 TCTTGGATCCCAGAATTCCCTT 58.799 45.455 13.07 0.00 33.81 3.95
2216 2542 4.379875 TCTTGGATCCCAGAATTCCCTTA 58.620 43.478 13.07 0.00 33.81 2.69
2217 2543 4.793520 TCTTGGATCCCAGAATTCCCTTAA 59.206 41.667 13.07 0.00 33.81 1.85
2218 2544 4.796110 TGGATCCCAGAATTCCCTTAAG 57.204 45.455 9.90 0.00 0.00 1.85
2219 2545 4.119155 TGGATCCCAGAATTCCCTTAAGT 58.881 43.478 9.90 0.00 0.00 2.24
2220 2546 5.293643 TGGATCCCAGAATTCCCTTAAGTA 58.706 41.667 9.90 0.00 0.00 2.24
2221 2547 5.734140 TGGATCCCAGAATTCCCTTAAGTAA 59.266 40.000 9.90 0.00 0.00 2.24
2222 2548 6.062749 GGATCCCAGAATTCCCTTAAGTAAC 58.937 44.000 0.00 0.00 0.00 2.50
2223 2549 5.093849 TCCCAGAATTCCCTTAAGTAACG 57.906 43.478 0.65 0.00 0.00 3.18
2224 2550 4.778958 TCCCAGAATTCCCTTAAGTAACGA 59.221 41.667 0.65 0.00 0.00 3.85
2225 2551 4.874396 CCCAGAATTCCCTTAAGTAACGAC 59.126 45.833 0.65 0.00 0.00 4.34
2226 2552 4.565564 CCAGAATTCCCTTAAGTAACGACG 59.434 45.833 0.65 0.00 0.00 5.12
2227 2553 4.032558 CAGAATTCCCTTAAGTAACGACGC 59.967 45.833 0.65 0.00 0.00 5.19
2228 2554 3.881937 ATTCCCTTAAGTAACGACGCT 57.118 42.857 0.97 0.00 0.00 5.07
2229 2555 2.642139 TCCCTTAAGTAACGACGCTG 57.358 50.000 0.97 0.00 0.00 5.18
2230 2556 1.203052 TCCCTTAAGTAACGACGCTGG 59.797 52.381 0.97 0.00 0.00 4.85
2231 2557 1.203052 CCCTTAAGTAACGACGCTGGA 59.797 52.381 0.97 0.00 0.00 3.86
2232 2558 2.159142 CCCTTAAGTAACGACGCTGGAT 60.159 50.000 0.97 0.00 0.00 3.41
2233 2559 3.518590 CCTTAAGTAACGACGCTGGATT 58.481 45.455 0.97 0.00 0.00 3.01
2234 2560 3.930848 CCTTAAGTAACGACGCTGGATTT 59.069 43.478 0.97 0.00 0.00 2.17
2235 2561 4.390909 CCTTAAGTAACGACGCTGGATTTT 59.609 41.667 0.97 0.00 0.00 1.82
2236 2562 5.445540 CCTTAAGTAACGACGCTGGATTTTC 60.446 44.000 0.97 0.00 0.00 2.29
2237 2563 2.344025 AGTAACGACGCTGGATTTTCC 58.656 47.619 0.00 0.00 36.96 3.13
2238 2564 1.060122 GTAACGACGCTGGATTTTCCG 59.940 52.381 0.00 0.00 40.17 4.30
2239 2565 1.296056 AACGACGCTGGATTTTCCGG 61.296 55.000 0.00 0.00 45.82 5.14
2244 2570 3.497879 CTGGATTTTCCGGCGGTC 58.502 61.111 27.32 15.90 40.17 4.79
2245 2571 1.376683 CTGGATTTTCCGGCGGTCA 60.377 57.895 27.32 11.43 40.17 4.02
2246 2572 0.748005 CTGGATTTTCCGGCGGTCAT 60.748 55.000 27.32 15.93 40.17 3.06
2247 2573 1.029408 TGGATTTTCCGGCGGTCATG 61.029 55.000 27.32 0.00 40.17 3.07
2248 2574 1.724582 GGATTTTCCGGCGGTCATGG 61.725 60.000 27.32 0.00 0.00 3.66
2249 2575 1.001393 ATTTTCCGGCGGTCATGGT 60.001 52.632 27.32 5.66 0.00 3.55
2250 2576 0.610785 ATTTTCCGGCGGTCATGGTT 60.611 50.000 27.32 2.72 0.00 3.67
2251 2577 1.238625 TTTTCCGGCGGTCATGGTTC 61.239 55.000 27.32 0.00 0.00 3.62
2252 2578 2.398840 TTTCCGGCGGTCATGGTTCA 62.399 55.000 27.32 0.00 0.00 3.18
2253 2579 2.359354 CCGGCGGTCATGGTTCAA 60.359 61.111 19.97 0.00 0.00 2.69
2254 2580 2.686816 CCGGCGGTCATGGTTCAAC 61.687 63.158 19.97 0.00 0.00 3.18
2255 2581 1.671054 CGGCGGTCATGGTTCAACT 60.671 57.895 0.00 0.00 0.00 3.16
2256 2582 1.875963 GGCGGTCATGGTTCAACTG 59.124 57.895 0.00 0.00 0.00 3.16
2257 2583 1.586154 GGCGGTCATGGTTCAACTGG 61.586 60.000 0.00 0.00 0.00 4.00
2258 2584 0.889186 GCGGTCATGGTTCAACTGGT 60.889 55.000 0.00 0.00 0.00 4.00
2259 2585 1.604604 CGGTCATGGTTCAACTGGTT 58.395 50.000 0.00 0.00 0.00 3.67
2260 2586 1.953686 CGGTCATGGTTCAACTGGTTT 59.046 47.619 0.00 0.00 0.00 3.27
2261 2587 2.287547 CGGTCATGGTTCAACTGGTTTG 60.288 50.000 0.00 0.00 36.42 2.93
2262 2588 2.035832 GGTCATGGTTCAACTGGTTTGG 59.964 50.000 0.00 0.00 35.69 3.28
2263 2589 2.693074 GTCATGGTTCAACTGGTTTGGT 59.307 45.455 0.00 0.00 35.69 3.67
2264 2590 3.132111 GTCATGGTTCAACTGGTTTGGTT 59.868 43.478 0.00 0.00 35.69 3.67
2265 2591 3.383185 TCATGGTTCAACTGGTTTGGTTC 59.617 43.478 0.00 0.00 35.69 3.62
2266 2592 3.094484 TGGTTCAACTGGTTTGGTTCT 57.906 42.857 0.00 0.00 35.69 3.01
2267 2593 2.757868 TGGTTCAACTGGTTTGGTTCTG 59.242 45.455 0.00 0.00 35.69 3.02
2268 2594 2.758423 GGTTCAACTGGTTTGGTTCTGT 59.242 45.455 0.00 0.00 35.69 3.41
2269 2595 3.194755 GGTTCAACTGGTTTGGTTCTGTT 59.805 43.478 0.00 0.00 35.69 3.16
2270 2596 4.421058 GTTCAACTGGTTTGGTTCTGTTC 58.579 43.478 0.00 0.00 35.69 3.18
2271 2597 3.020984 TCAACTGGTTTGGTTCTGTTCC 58.979 45.455 0.00 0.00 35.69 3.62
2272 2598 2.757868 CAACTGGTTTGGTTCTGTTCCA 59.242 45.455 0.00 0.00 0.00 3.53
2273 2599 3.312736 ACTGGTTTGGTTCTGTTCCAT 57.687 42.857 0.00 0.00 34.75 3.41
2274 2600 4.447138 ACTGGTTTGGTTCTGTTCCATA 57.553 40.909 0.00 0.00 34.75 2.74
2275 2601 4.998051 ACTGGTTTGGTTCTGTTCCATAT 58.002 39.130 0.00 0.00 34.75 1.78
2276 2602 6.134535 ACTGGTTTGGTTCTGTTCCATATA 57.865 37.500 0.00 0.00 34.75 0.86
2277 2603 6.731467 ACTGGTTTGGTTCTGTTCCATATAT 58.269 36.000 0.00 0.00 34.75 0.86
2278 2604 7.867921 ACTGGTTTGGTTCTGTTCCATATATA 58.132 34.615 0.00 0.00 34.75 0.86
2279 2605 7.993183 ACTGGTTTGGTTCTGTTCCATATATAG 59.007 37.037 0.00 0.00 34.75 1.31
2280 2606 7.867921 TGGTTTGGTTCTGTTCCATATATAGT 58.132 34.615 0.00 0.00 34.75 2.12
2281 2607 8.994500 TGGTTTGGTTCTGTTCCATATATAGTA 58.006 33.333 0.00 0.00 34.75 1.82
2282 2608 9.841295 GGTTTGGTTCTGTTCCATATATAGTAA 57.159 33.333 0.00 0.00 34.75 2.24
2346 2672 5.450385 CGTATCTAGACACGTTTTTAGGACG 59.550 44.000 15.35 10.73 45.46 4.79
2363 2689 8.451908 TTTAGGACGTAGGTAATACTTACTCC 57.548 38.462 16.07 16.07 36.39 3.85
2364 2690 6.259346 AGGACGTAGGTAATACTTACTCCT 57.741 41.667 18.55 18.55 35.56 3.69
2365 2691 6.295249 AGGACGTAGGTAATACTTACTCCTC 58.705 44.000 18.55 9.05 35.52 3.71
2366 2692 5.471797 GGACGTAGGTAATACTTACTCCTCC 59.528 48.000 16.33 11.34 36.39 4.30
2367 2693 5.059833 ACGTAGGTAATACTTACTCCTCCG 58.940 45.833 10.30 0.00 36.39 4.63
2368 2694 5.059833 CGTAGGTAATACTTACTCCTCCGT 58.940 45.833 10.30 0.00 36.39 4.69
2370 2696 5.385628 AGGTAATACTTACTCCTCCGTCT 57.614 43.478 0.00 0.00 36.39 4.18
2371 2697 5.764432 AGGTAATACTTACTCCTCCGTCTT 58.236 41.667 0.00 0.00 36.39 3.01
2372 2698 5.593502 AGGTAATACTTACTCCTCCGTCTTG 59.406 44.000 0.00 0.00 36.39 3.02
2373 2699 5.591877 GGTAATACTTACTCCTCCGTCTTGA 59.408 44.000 0.00 0.00 36.39 3.02
2376 2702 6.793505 ATACTTACTCCTCCGTCTTGAATT 57.206 37.500 0.00 0.00 0.00 2.17
2378 2704 6.793505 ACTTACTCCTCCGTCTTGAATTAT 57.206 37.500 0.00 0.00 0.00 1.28
2379 2705 7.184067 ACTTACTCCTCCGTCTTGAATTATT 57.816 36.000 0.00 0.00 0.00 1.40
2380 2706 7.621796 ACTTACTCCTCCGTCTTGAATTATTT 58.378 34.615 0.00 0.00 0.00 1.40
2381 2707 7.549488 ACTTACTCCTCCGTCTTGAATTATTTG 59.451 37.037 0.00 0.00 0.00 2.32
2382 2708 5.805728 ACTCCTCCGTCTTGAATTATTTGT 58.194 37.500 0.00 0.00 0.00 2.83
2384 2710 4.868171 TCCTCCGTCTTGAATTATTTGTCG 59.132 41.667 0.00 0.00 0.00 4.35
2385 2711 4.494199 CCTCCGTCTTGAATTATTTGTCGC 60.494 45.833 0.00 0.00 0.00 5.19
2386 2712 4.250464 TCCGTCTTGAATTATTTGTCGCT 58.750 39.130 0.00 0.00 0.00 4.93
2387 2713 4.328983 TCCGTCTTGAATTATTTGTCGCTC 59.671 41.667 0.00 0.00 0.00 5.03
2389 2715 5.390461 CCGTCTTGAATTATTTGTCGCTCAA 60.390 40.000 0.00 0.00 0.00 3.02
2441 2767 9.665719 TTAGTGCTAGATACATTCATTTGAACA 57.334 29.630 0.00 0.00 36.80 3.18
2442 2768 8.565896 AGTGCTAGATACATTCATTTGAACAA 57.434 30.769 0.00 0.00 36.80 2.83
2443 2769 8.454106 AGTGCTAGATACATTCATTTGAACAAC 58.546 33.333 0.00 0.00 36.80 3.32
2444 2770 8.236586 GTGCTAGATACATTCATTTGAACAACA 58.763 33.333 0.00 0.00 36.80 3.33
2445 2771 8.791675 TGCTAGATACATTCATTTGAACAACAA 58.208 29.630 0.00 0.00 36.80 2.83
2446 2772 9.282247 GCTAGATACATTCATTTGAACAACAAG 57.718 33.333 0.00 0.00 39.77 3.16
2458 2784 7.513190 TTTGAACAACAAGTAATTTTGGACG 57.487 32.000 0.00 0.00 39.77 4.79
2470 2796 2.905415 TTTGGACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
2471 2797 2.431954 TTGGACGGAGGGAGTACTAG 57.568 55.000 0.00 0.00 0.00 2.57
2473 2799 0.822944 GGACGGAGGGAGTACTAGCC 60.823 65.000 0.00 0.00 0.00 3.93
2501 2831 3.003480 CCTCCAGCACAGTAAGCTTTAC 58.997 50.000 3.20 0.89 41.14 2.01
2520 2850 3.228188 ACAAAGTTCAGCCTTCCATCA 57.772 42.857 0.00 0.00 0.00 3.07
2521 2851 3.152341 ACAAAGTTCAGCCTTCCATCAG 58.848 45.455 0.00 0.00 0.00 2.90
2560 2890 4.805719 GCATCGTATGATCACAAGTCAGAA 59.194 41.667 0.00 0.00 30.49 3.02
2575 2905 4.028131 AGTCAGAATGTGTAATCCCCGTA 58.972 43.478 0.00 0.00 37.40 4.02
2578 2908 4.712829 TCAGAATGTGTAATCCCCGTAAGA 59.287 41.667 0.00 0.00 36.97 2.10
2617 2955 4.438145 GTCAGCAACGACGATAAGATACTG 59.562 45.833 0.00 0.00 0.00 2.74
2679 3017 2.834638 AGCCAGCCAATTTAGATGGT 57.165 45.000 10.41 0.00 40.23 3.55
2745 3083 1.614903 TGTCAGCAAATGAGGCCAAAG 59.385 47.619 5.01 0.00 39.07 2.77
2746 3084 0.604578 TCAGCAAATGAGGCCAAAGC 59.395 50.000 5.01 0.00 32.77 3.51
2777 3115 7.579761 AAAAATAAAAAGCAAATGAGGCCAA 57.420 28.000 5.01 0.00 0.00 4.52
2778 3116 7.579761 AAAATAAAAAGCAAATGAGGCCAAA 57.420 28.000 5.01 0.00 0.00 3.28
2817 3155 4.831698 CTGGAGTGCTCTAGCTGC 57.168 61.111 0.00 0.00 42.66 5.25
2853 3197 4.473520 CCGCCGCTGGACTGGATT 62.474 66.667 0.00 0.00 0.00 3.01
2864 3225 3.126879 CTGGATTTCAGCGGCGCA 61.127 61.111 35.02 14.17 36.60 6.09
2869 3230 2.583685 GATTTCAGCGGCGCAGTTCC 62.584 60.000 35.02 14.13 0.00 3.62
2887 3248 6.317391 GCAGTTCCAGTTCTAGCTCAAAATAT 59.683 38.462 0.00 0.00 0.00 1.28
2899 3260 5.931532 AGCTCAAAATATGTTGTGTTCGAG 58.068 37.500 5.52 0.00 0.00 4.04
2934 3298 0.108963 CTGTACCGAAAACCCACCCA 59.891 55.000 0.00 0.00 0.00 4.51
2941 3305 1.804746 CGAAAACCCACCCAACTTTGC 60.805 52.381 0.00 0.00 0.00 3.68
2952 3316 1.000385 CCAACTTTGCGCTGGATTTCA 60.000 47.619 9.73 0.00 31.38 2.69
2977 3341 9.229784 CAGCAAAGCACAAAATATATCTACTTG 57.770 33.333 0.00 0.00 0.00 3.16
2978 3342 8.408601 AGCAAAGCACAAAATATATCTACTTGG 58.591 33.333 0.00 0.00 0.00 3.61
2979 3343 8.190784 GCAAAGCACAAAATATATCTACTTGGT 58.809 33.333 0.00 0.00 0.00 3.67
2983 3347 8.190784 AGCACAAAATATATCTACTTGGTTTGC 58.809 33.333 0.00 0.00 0.00 3.68
2984 3348 7.435192 GCACAAAATATATCTACTTGGTTTGCC 59.565 37.037 0.00 0.00 0.00 4.52
2985 3349 8.465999 CACAAAATATATCTACTTGGTTTGCCA 58.534 33.333 0.00 0.00 44.38 4.92
2986 3350 8.686334 ACAAAATATATCTACTTGGTTTGCCAG 58.314 33.333 0.00 0.00 46.91 4.85
2987 3351 6.884280 AATATATCTACTTGGTTTGCCAGC 57.116 37.500 0.00 0.00 46.91 4.85
2988 3352 1.839424 ATCTACTTGGTTTGCCAGCC 58.161 50.000 0.00 0.00 46.91 4.85
2989 3353 0.771127 TCTACTTGGTTTGCCAGCCT 59.229 50.000 0.00 0.00 46.91 4.58
2990 3354 1.144913 TCTACTTGGTTTGCCAGCCTT 59.855 47.619 0.00 0.00 46.91 4.35
3002 3442 2.357517 AGCCTTCGCGTCCTTGTG 60.358 61.111 5.77 0.00 41.18 3.33
3021 3461 3.578282 TGTGACTAACCAAGATGAGCAGA 59.422 43.478 0.00 0.00 0.00 4.26
3022 3462 3.929610 GTGACTAACCAAGATGAGCAGAC 59.070 47.826 0.00 0.00 0.00 3.51
3030 3470 4.940046 ACCAAGATGAGCAGACAACTAATG 59.060 41.667 0.00 0.00 0.00 1.90
3081 3521 1.590525 TTCACCACACGCTCGACAC 60.591 57.895 0.00 0.00 0.00 3.67
3089 3529 0.109086 CACGCTCGACACCATCTTCT 60.109 55.000 0.00 0.00 0.00 2.85
3112 3552 3.939564 GCAATGAGGCCCCGAAAT 58.060 55.556 0.00 0.00 0.00 2.17
3160 3601 3.782443 GGGACGGAGATGGGCGTT 61.782 66.667 0.00 0.00 0.00 4.84
3237 3678 1.339929 GGTTCAAACCCGTTTCAGCAT 59.660 47.619 0.10 0.00 43.43 3.79
3383 3828 6.667848 TCCAGTCCTTATGTCACTCTTCAATA 59.332 38.462 0.00 0.00 0.00 1.90
3420 3866 4.824479 AAATGGCCAACATCTTTTAGGG 57.176 40.909 10.96 0.00 39.40 3.53
3447 3893 3.713003 TCTGAGCTAGACCATTCCTTGA 58.287 45.455 0.00 0.00 0.00 3.02
3450 3896 5.013079 TCTGAGCTAGACCATTCCTTGAAAA 59.987 40.000 0.00 0.00 0.00 2.29
3509 3955 5.195001 TGTTAGATTGGTGAAAAGTTGGC 57.805 39.130 0.00 0.00 0.00 4.52
3514 3960 1.698506 TGGTGAAAAGTTGGCGGAAT 58.301 45.000 0.00 0.00 0.00 3.01
3566 4012 4.614993 CGTGATATTTTTGCAACTCCGGTT 60.615 41.667 0.00 0.00 35.86 4.44
3613 4059 6.595716 ACATTTAGCACAAGTGATAGAGTTCC 59.404 38.462 4.04 0.00 32.67 3.62
3615 4061 4.833478 AGCACAAGTGATAGAGTTCCAT 57.167 40.909 4.04 0.00 0.00 3.41
3704 4152 1.108776 CGATGAGTTTAGGGGACGGA 58.891 55.000 0.00 0.00 0.00 4.69
3763 4220 3.433306 ACGATTTTCTTGTGGGGATGA 57.567 42.857 0.00 0.00 0.00 2.92
3770 4227 2.061848 TCTTGTGGGGATGAGTTTGGA 58.938 47.619 0.00 0.00 0.00 3.53
3774 4231 2.445145 TGTGGGGATGAGTTTGGAAAGA 59.555 45.455 0.00 0.00 0.00 2.52
3787 4244 3.374042 TGGAAAGACAAAACCCAGTGA 57.626 42.857 0.00 0.00 0.00 3.41
3796 4253 2.943033 CAAAACCCAGTGAGTTTCGTCT 59.057 45.455 2.98 0.00 36.44 4.18
3816 4273 0.888736 CCGTTGCCATCTTGACACCA 60.889 55.000 0.00 0.00 0.00 4.17
3817 4274 1.167851 CGTTGCCATCTTGACACCAT 58.832 50.000 0.00 0.00 0.00 3.55
3818 4275 1.131126 CGTTGCCATCTTGACACCATC 59.869 52.381 0.00 0.00 0.00 3.51
3819 4276 2.440409 GTTGCCATCTTGACACCATCT 58.560 47.619 0.00 0.00 0.00 2.90
3820 4277 2.821969 GTTGCCATCTTGACACCATCTT 59.178 45.455 0.00 0.00 0.00 2.40
3821 4278 2.439409 TGCCATCTTGACACCATCTTG 58.561 47.619 0.00 0.00 0.00 3.02
3846 4303 4.451629 ACTGTCATCGTCGTTTCCTTAT 57.548 40.909 0.00 0.00 0.00 1.73
3848 4305 4.863131 ACTGTCATCGTCGTTTCCTTATTC 59.137 41.667 0.00 0.00 0.00 1.75
3851 4308 4.863131 GTCATCGTCGTTTCCTTATTCTGT 59.137 41.667 0.00 0.00 0.00 3.41
3911 4376 8.441312 TGTTTCCGATTAGTACACTTCTTTTT 57.559 30.769 0.00 0.00 0.00 1.94
3917 4382 7.601508 CCGATTAGTACACTTCTTTTTAGTGGT 59.398 37.037 7.78 0.00 45.67 4.16
3960 4425 7.041235 ACACGCATACCTCTCTACTAATCTTAC 60.041 40.741 0.00 0.00 0.00 2.34
3962 4427 6.127952 CGCATACCTCTCTACTAATCTTACCC 60.128 46.154 0.00 0.00 0.00 3.69
3977 4442 0.614812 TACCCAACTTTACCTCCGGC 59.385 55.000 0.00 0.00 0.00 6.13
4007 4472 3.787476 GCACAACGTCGAGTGTTTCAATT 60.787 43.478 18.56 0.00 38.02 2.32
4011 4476 4.205323 ACGTCGAGTGTTTCAATTTTCC 57.795 40.909 0.00 0.00 0.00 3.13
4012 4477 3.215244 CGTCGAGTGTTTCAATTTTCCG 58.785 45.455 0.00 0.00 0.00 4.30
4048 4529 6.716628 TGACCTGTCTGATAAAAGCTTTGATT 59.283 34.615 13.54 0.00 0.00 2.57
4057 4538 1.909700 AAGCTTTGATTCCCGCTTCA 58.090 45.000 0.00 0.00 38.21 3.02
4058 4539 1.457346 AGCTTTGATTCCCGCTTCAG 58.543 50.000 0.00 0.00 0.00 3.02
4060 4541 1.457346 CTTTGATTCCCGCTTCAGCT 58.543 50.000 0.00 0.00 39.32 4.24
4094 4576 4.876107 GTCACCCACACTATATTCACCAAG 59.124 45.833 0.00 0.00 0.00 3.61
4134 5975 7.811236 TCTTTGCTTTTCATTTCAGATCATCAC 59.189 33.333 0.00 0.00 0.00 3.06
4151 5994 5.497474 TCATCACTAGGAGCTTAAAAACCC 58.503 41.667 0.00 0.00 0.00 4.11
4159 6002 6.247229 AGGAGCTTAAAAACCCAAATTGTT 57.753 33.333 0.00 0.00 0.00 2.83
4172 6015 3.458189 CAAATTGTTGGCGTAACCCAAA 58.542 40.909 0.00 0.00 45.80 3.28
4192 6037 2.955609 TTTGGTCCCCAAATCGAGC 58.044 52.632 4.36 0.00 46.92 5.03
4203 6048 2.416747 CAAATCGAGCAGTTCCAGTGA 58.583 47.619 0.00 0.00 0.00 3.41
4221 6066 3.238755 ATGCCAAGCCCGCCAAAAC 62.239 57.895 0.00 0.00 0.00 2.43
4224 6069 2.725008 CAAGCCCGCCAAAACGAA 59.275 55.556 0.00 0.00 34.06 3.85
4227 6072 2.969300 AAGCCCGCCAAAACGAAGGA 62.969 55.000 0.00 0.00 34.06 3.36
4229 6074 1.579429 CCCGCCAAAACGAAGGAAG 59.421 57.895 0.00 0.00 34.06 3.46
4230 6075 0.887387 CCCGCCAAAACGAAGGAAGA 60.887 55.000 0.00 0.00 34.06 2.87
4244 6090 6.149633 ACGAAGGAAGAACAACAATTATTGC 58.850 36.000 4.68 0.00 32.47 3.56
4248 6094 6.681777 AGGAAGAACAACAATTATTGCTGTC 58.318 36.000 13.39 8.11 38.90 3.51
4253 6099 6.265196 AGAACAACAATTATTGCTGTCCTCAA 59.735 34.615 13.39 0.00 38.90 3.02
4296 6142 8.730680 GGAAAGAGTAATGCTCAAAACTAATCA 58.269 33.333 0.46 0.00 46.47 2.57
4325 6171 2.800541 CGGCTCCATCCTGCAGCTA 61.801 63.158 8.66 0.00 33.38 3.32
4329 6175 1.809651 GCTCCATCCTGCAGCTACTTC 60.810 57.143 8.66 0.00 0.00 3.01
4338 6184 1.586303 CAGCTACTTCGATCGCGCA 60.586 57.895 11.09 0.00 37.46 6.09
4382 6228 1.079127 CCACGATGGACGCCTCTTT 60.079 57.895 0.00 0.00 46.94 2.52
4584 6430 0.536006 CATCCTTCAAGATCCCCGCC 60.536 60.000 0.00 0.00 0.00 6.13
4731 6577 1.890894 CGTCGGGTTCACCATCTCT 59.109 57.895 0.00 0.00 40.22 3.10
5048 6900 3.322466 CGGGTCCAACTGGCTCCT 61.322 66.667 8.82 0.00 34.44 3.69
5058 6910 0.773644 ACTGGCTCCTGGACAACATT 59.226 50.000 0.00 0.00 29.31 2.71
5064 6916 2.356135 CTCCTGGACAACATTAACCGG 58.644 52.381 0.00 0.00 0.00 5.28
5103 6955 2.986979 TGGGTCGTGACGCTGCTA 60.987 61.111 16.55 0.00 43.67 3.49
5188 7040 1.000486 CACGAGGAAGAGGAGGGGA 60.000 63.158 0.00 0.00 0.00 4.81
5325 7178 2.715046 TGTGAAGATGGAGGTGAATGC 58.285 47.619 0.00 0.00 0.00 3.56
5379 7233 8.474025 CAGGAACAGAGAAATGTATCTAGTTCT 58.526 37.037 15.94 0.00 40.63 3.01
5400 7254 3.550820 TCTAGCAAGTTGCCAAGTTGAA 58.449 40.909 25.32 12.96 46.52 2.69
5419 7273 6.426937 AGTTGAACGAGTAACACTATGCAATT 59.573 34.615 0.00 0.00 0.00 2.32
5532 7575 8.356533 GAATGTATATGCCATTCAAAGGTTTG 57.643 34.615 18.08 0.00 44.81 2.93
5618 7701 3.313690 GCGGTTATTTGGAAGTGTTTGG 58.686 45.455 0.00 0.00 0.00 3.28
5636 7719 1.617850 TGGTGGCAAATTCATGTGACC 59.382 47.619 0.00 0.00 0.00 4.02
5751 7834 9.914131 GAGATATAATACATAGCAACACAGTCA 57.086 33.333 0.00 0.00 0.00 3.41
5755 7838 8.737168 ATAATACATAGCAACACAGTCATTGT 57.263 30.769 0.00 0.00 41.94 2.71
5756 7839 7.452880 AATACATAGCAACACAGTCATTGTT 57.547 32.000 0.00 0.00 38.16 2.83
5769 7874 4.761739 CAGTCATTGTTACCATGTGGACTT 59.238 41.667 5.96 0.00 38.94 3.01
5846 7951 4.551702 TGCCTAAGAAATGCAGTAGTGA 57.448 40.909 0.42 0.00 0.00 3.41
5877 7990 5.221722 TGCAGGTCAGATATGGAATTAGGTC 60.222 44.000 0.00 0.00 0.00 3.85
5907 8020 0.957395 AACCATCGGCAGTTGAGCAG 60.957 55.000 0.00 0.00 35.83 4.24
5910 8024 0.390866 CATCGGCAGTTGAGCAGAGT 60.391 55.000 0.00 0.00 41.78 3.24
5926 8040 2.209064 GAGTCGTGCAGAACCCGCTA 62.209 60.000 0.00 0.00 0.00 4.26
5930 8044 1.811679 GTGCAGAACCCGCTAGCTC 60.812 63.158 13.93 3.16 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.203237 TCCCAAAGAGTCTCTGGAGCT 60.203 52.381 14.50 0.00 31.38 4.09
121 122 9.087871 TCCAGATGGTTTTCTCATCAAATTTTA 57.912 29.630 0.00 0.00 42.38 1.52
126 127 6.247676 TGATCCAGATGGTTTTCTCATCAAA 58.752 36.000 0.00 0.00 42.38 2.69
127 128 5.818887 TGATCCAGATGGTTTTCTCATCAA 58.181 37.500 0.00 0.00 42.38 2.57
128 129 5.440207 TGATCCAGATGGTTTTCTCATCA 57.560 39.130 0.00 0.00 42.38 3.07
129 130 6.060136 TCATGATCCAGATGGTTTTCTCATC 58.940 40.000 0.00 0.00 40.79 2.92
130 131 6.009908 TCATGATCCAGATGGTTTTCTCAT 57.990 37.500 0.00 0.00 36.34 2.90
242 245 0.809241 GCTGAACGCTGATCCTCAGG 60.809 60.000 6.30 0.00 44.43 3.86
252 255 0.108662 TGATCATGTCGCTGAACGCT 60.109 50.000 0.00 0.00 43.23 5.07
253 256 0.721154 TTGATCATGTCGCTGAACGC 59.279 50.000 0.00 0.00 43.23 4.84
254 257 3.454042 TTTTGATCATGTCGCTGAACG 57.546 42.857 0.00 0.00 45.62 3.95
255 258 4.100529 CCATTTTGATCATGTCGCTGAAC 58.899 43.478 0.00 0.00 0.00 3.18
256 259 4.009002 TCCATTTTGATCATGTCGCTGAA 58.991 39.130 0.00 0.00 0.00 3.02
257 260 3.608796 TCCATTTTGATCATGTCGCTGA 58.391 40.909 0.00 0.00 0.00 4.26
258 261 4.359971 TTCCATTTTGATCATGTCGCTG 57.640 40.909 0.00 0.00 0.00 5.18
299 302 4.223032 GGATCTGTTTGGTTAGTCTCAGGA 59.777 45.833 0.00 0.00 0.00 3.86
396 400 8.510505 GGAAGAATGAGGCACAATCTAAATATC 58.489 37.037 2.88 0.00 37.73 1.63
463 748 4.672587 AGGGCAAAAGAAAAAGGAGTTC 57.327 40.909 0.00 0.00 0.00 3.01
523 808 5.066593 GGAGCTAGTTATTCATTTGAGGGG 58.933 45.833 0.00 0.00 0.00 4.79
529 814 6.156949 TGAGTGGAGGAGCTAGTTATTCATTT 59.843 38.462 0.00 0.00 0.00 2.32
557 842 6.770746 ATGAATATCTGATGGGCAATAAGC 57.229 37.500 0.00 0.00 44.65 3.09
561 846 9.543231 AGAAAATATGAATATCTGATGGGCAAT 57.457 29.630 0.00 0.00 0.00 3.56
564 849 9.240734 AGAAGAAAATATGAATATCTGATGGGC 57.759 33.333 0.00 0.00 0.00 5.36
582 867 9.847224 ACAGGAACATTAAGAGTAAGAAGAAAA 57.153 29.630 0.00 0.00 0.00 2.29
583 868 9.847224 AACAGGAACATTAAGAGTAAGAAGAAA 57.153 29.630 0.00 0.00 0.00 2.52
584 869 9.490379 GAACAGGAACATTAAGAGTAAGAAGAA 57.510 33.333 0.00 0.00 0.00 2.52
585 870 8.095169 GGAACAGGAACATTAAGAGTAAGAAGA 58.905 37.037 0.00 0.00 0.00 2.87
586 871 7.878127 TGGAACAGGAACATTAAGAGTAAGAAG 59.122 37.037 0.00 0.00 0.00 2.85
624 914 3.899371 TGGCAGGACCAGTGCTAA 58.101 55.556 5.75 0.00 46.36 3.09
698 988 4.103928 GGGACTAGGGGCTGGGGA 62.104 72.222 0.00 0.00 0.00 4.81
740 1030 1.494721 TGCAAGTCCCCTTTCTTCTGT 59.505 47.619 0.00 0.00 0.00 3.41
777 1067 1.801178 GAATATACGGCTGCTTCTGCC 59.199 52.381 0.00 4.86 43.55 4.85
860 1150 6.053005 TGAGGCTAATTTACACGAAATAGGG 58.947 40.000 0.00 0.00 36.71 3.53
884 1175 5.124776 CACTAGACTTACTACTGCAAGCTCT 59.875 44.000 0.00 0.00 37.60 4.09
890 1181 3.427573 TGCCACTAGACTTACTACTGCA 58.572 45.455 0.00 0.00 0.00 4.41
898 1189 3.967326 AGTGCCATATGCCACTAGACTTA 59.033 43.478 17.26 0.00 40.16 2.24
911 1211 1.454479 GCCAGTGCCAGTGCCATAT 60.454 57.895 0.00 0.00 36.33 1.78
912 1212 2.045045 GCCAGTGCCAGTGCCATA 60.045 61.111 0.00 0.00 36.33 2.74
930 1230 1.552799 TAAGCTAGCTGCCAGTGCCA 61.553 55.000 20.16 0.00 44.23 4.92
932 1232 1.673168 AATAAGCTAGCTGCCAGTGC 58.327 50.000 20.16 0.00 44.23 4.40
934 1234 3.118905 GCTAATAAGCTAGCTGCCAGT 57.881 47.619 20.16 8.65 45.85 4.00
949 1249 8.734386 GCTTGGCTTCACATATTTATAGCTAAT 58.266 33.333 0.00 0.00 30.54 1.73
993 1293 2.107750 CCTCGCTGCATCGTGGAT 59.892 61.111 22.81 0.00 43.49 3.41
995 1295 2.584418 CTCCTCGCTGCATCGTGG 60.584 66.667 21.60 21.60 42.53 4.94
1095 1401 1.276622 TCTTCTTCCCCTTCTTCCCG 58.723 55.000 0.00 0.00 0.00 5.14
1107 1413 1.450491 GAGGCCGCCCTTCTTCTTC 60.450 63.158 5.55 0.00 43.12 2.87
1193 1501 6.016276 ACACAGTTTAATCTTAAGCAACCAGG 60.016 38.462 0.00 0.00 0.00 4.45
1197 1505 7.193595 ACACACACAGTTTAATCTTAAGCAAC 58.806 34.615 0.00 0.00 0.00 4.17
1497 1814 1.682982 CTTCGTATGGGTATCGTCGC 58.317 55.000 0.00 0.00 0.00 5.19
1548 1865 1.067295 TCCCCTGTCATGCAAGAAGT 58.933 50.000 0.00 0.00 0.00 3.01
2067 2393 2.349590 TCCATCTCGTCGTTCTCGTAA 58.650 47.619 0.00 0.00 38.33 3.18
2088 2414 1.146041 GTACATGGAGATGGGCGCA 59.854 57.895 10.83 5.70 33.39 6.09
2124 2450 1.291877 GCACGTACCTGAGCTGGTTG 61.292 60.000 0.33 0.00 41.22 3.77
2125 2451 1.004918 GCACGTACCTGAGCTGGTT 60.005 57.895 0.33 0.00 41.22 3.67
2126 2452 2.657237 GCACGTACCTGAGCTGGT 59.343 61.111 0.00 0.00 43.66 4.00
2148 2474 1.954146 TTGACAGAAGGCGCGTCAC 60.954 57.895 15.58 6.65 39.29 3.67
2149 2475 1.954146 GTTGACAGAAGGCGCGTCA 60.954 57.895 15.58 10.46 37.87 4.35
2150 2476 2.668280 GGTTGACAGAAGGCGCGTC 61.668 63.158 0.21 0.21 0.00 5.19
2151 2477 2.665185 GGTTGACAGAAGGCGCGT 60.665 61.111 8.43 0.00 0.00 6.01
2152 2478 2.664851 TGGTTGACAGAAGGCGCG 60.665 61.111 0.00 0.00 0.00 6.86
2153 2479 2.617274 GGTGGTTGACAGAAGGCGC 61.617 63.158 0.00 0.00 0.00 6.53
2155 2481 0.398318 AGAGGTGGTTGACAGAAGGC 59.602 55.000 0.00 0.00 0.00 4.35
2156 2482 1.002544 GGAGAGGTGGTTGACAGAAGG 59.997 57.143 0.00 0.00 0.00 3.46
2157 2483 1.974236 AGGAGAGGTGGTTGACAGAAG 59.026 52.381 0.00 0.00 0.00 2.85
2158 2484 2.103153 AGGAGAGGTGGTTGACAGAA 57.897 50.000 0.00 0.00 0.00 3.02
2160 2486 2.938956 AAAGGAGAGGTGGTTGACAG 57.061 50.000 0.00 0.00 0.00 3.51
2161 2487 2.777692 AGAAAAGGAGAGGTGGTTGACA 59.222 45.455 0.00 0.00 0.00 3.58
2162 2488 3.493767 AGAAAAGGAGAGGTGGTTGAC 57.506 47.619 0.00 0.00 0.00 3.18
2163 2489 4.519906 AAAGAAAAGGAGAGGTGGTTGA 57.480 40.909 0.00 0.00 0.00 3.18
2164 2490 4.889995 AGAAAAGAAAAGGAGAGGTGGTTG 59.110 41.667 0.00 0.00 0.00 3.77
2165 2491 5.130705 AGAAAAGAAAAGGAGAGGTGGTT 57.869 39.130 0.00 0.00 0.00 3.67
2166 2492 4.797912 AGAAAAGAAAAGGAGAGGTGGT 57.202 40.909 0.00 0.00 0.00 4.16
2167 2493 5.013183 TCCTAGAAAAGAAAAGGAGAGGTGG 59.987 44.000 0.00 0.00 33.18 4.61
2168 2494 6.115448 TCCTAGAAAAGAAAAGGAGAGGTG 57.885 41.667 0.00 0.00 33.18 4.00
2174 2500 6.998673 CCAAGAACTCCTAGAAAAGAAAAGGA 59.001 38.462 0.00 0.00 36.69 3.36
2175 2501 6.998673 TCCAAGAACTCCTAGAAAAGAAAAGG 59.001 38.462 0.00 0.00 0.00 3.11
2176 2502 8.628630 ATCCAAGAACTCCTAGAAAAGAAAAG 57.371 34.615 0.00 0.00 0.00 2.27
2177 2503 7.665974 GGATCCAAGAACTCCTAGAAAAGAAAA 59.334 37.037 6.95 0.00 0.00 2.29
2178 2504 7.168905 GGATCCAAGAACTCCTAGAAAAGAAA 58.831 38.462 6.95 0.00 0.00 2.52
2179 2505 6.296489 GGGATCCAAGAACTCCTAGAAAAGAA 60.296 42.308 15.23 0.00 0.00 2.52
2180 2506 5.189934 GGGATCCAAGAACTCCTAGAAAAGA 59.810 44.000 15.23 0.00 0.00 2.52
2181 2507 5.045578 TGGGATCCAAGAACTCCTAGAAAAG 60.046 44.000 15.23 0.00 0.00 2.27
2182 2508 4.849810 TGGGATCCAAGAACTCCTAGAAAA 59.150 41.667 15.23 0.00 0.00 2.29
2183 2509 4.435137 TGGGATCCAAGAACTCCTAGAAA 58.565 43.478 15.23 0.00 0.00 2.52
2184 2510 4.033709 CTGGGATCCAAGAACTCCTAGAA 58.966 47.826 11.15 0.00 39.34 2.10
2185 2511 3.272285 TCTGGGATCCAAGAACTCCTAGA 59.728 47.826 17.16 0.00 42.37 2.43
2186 2512 3.647636 TCTGGGATCCAAGAACTCCTAG 58.352 50.000 17.16 0.00 38.60 3.02
2187 2513 3.776731 TCTGGGATCCAAGAACTCCTA 57.223 47.619 17.16 0.00 30.80 2.94
2188 2514 2.649742 TCTGGGATCCAAGAACTCCT 57.350 50.000 17.16 0.00 30.80 3.69
2189 2515 3.941704 ATTCTGGGATCCAAGAACTCC 57.058 47.619 30.36 3.58 30.80 3.85
2190 2516 4.203226 GGAATTCTGGGATCCAAGAACTC 58.797 47.826 30.36 28.05 30.80 3.01
2191 2517 3.053320 GGGAATTCTGGGATCCAAGAACT 60.053 47.826 30.36 22.29 34.82 3.01
2192 2518 3.053320 AGGGAATTCTGGGATCCAAGAAC 60.053 47.826 30.36 19.56 34.82 3.01
2193 2519 3.201363 AGGGAATTCTGGGATCCAAGAA 58.799 45.455 29.97 29.97 34.82 2.52
2194 2520 2.863884 AGGGAATTCTGGGATCCAAGA 58.136 47.619 15.49 15.49 34.82 3.02
2195 2521 3.677156 AAGGGAATTCTGGGATCCAAG 57.323 47.619 15.23 12.74 34.82 3.61
2196 2522 4.544152 ACTTAAGGGAATTCTGGGATCCAA 59.456 41.667 15.23 0.00 34.82 3.53
2197 2523 4.119155 ACTTAAGGGAATTCTGGGATCCA 58.881 43.478 15.23 0.00 34.82 3.41
2198 2524 4.797912 ACTTAAGGGAATTCTGGGATCC 57.202 45.455 1.92 1.92 0.00 3.36
2199 2525 5.758784 CGTTACTTAAGGGAATTCTGGGATC 59.241 44.000 7.53 0.00 0.00 3.36
2200 2526 5.427481 TCGTTACTTAAGGGAATTCTGGGAT 59.573 40.000 7.53 0.00 0.00 3.85
2201 2527 4.778958 TCGTTACTTAAGGGAATTCTGGGA 59.221 41.667 7.53 0.00 0.00 4.37
2202 2528 4.874396 GTCGTTACTTAAGGGAATTCTGGG 59.126 45.833 7.53 0.00 0.00 4.45
2203 2529 4.565564 CGTCGTTACTTAAGGGAATTCTGG 59.434 45.833 7.53 0.00 0.00 3.86
2204 2530 4.032558 GCGTCGTTACTTAAGGGAATTCTG 59.967 45.833 7.53 0.00 0.00 3.02
2205 2531 4.081807 AGCGTCGTTACTTAAGGGAATTCT 60.082 41.667 7.53 0.00 0.00 2.40
2206 2532 4.032558 CAGCGTCGTTACTTAAGGGAATTC 59.967 45.833 7.53 0.00 0.00 2.17
2207 2533 3.930848 CAGCGTCGTTACTTAAGGGAATT 59.069 43.478 7.53 0.00 0.00 2.17
2208 2534 3.518590 CAGCGTCGTTACTTAAGGGAAT 58.481 45.455 7.53 0.00 0.00 3.01
2209 2535 2.353011 CCAGCGTCGTTACTTAAGGGAA 60.353 50.000 7.53 0.00 0.00 3.97
2210 2536 1.203052 CCAGCGTCGTTACTTAAGGGA 59.797 52.381 7.53 0.00 0.00 4.20
2211 2537 1.203052 TCCAGCGTCGTTACTTAAGGG 59.797 52.381 7.53 0.00 0.00 3.95
2212 2538 2.642139 TCCAGCGTCGTTACTTAAGG 57.358 50.000 7.53 0.00 0.00 2.69
2213 2539 5.445540 GGAAAATCCAGCGTCGTTACTTAAG 60.446 44.000 0.00 0.00 36.28 1.85
2214 2540 4.389687 GGAAAATCCAGCGTCGTTACTTAA 59.610 41.667 0.00 0.00 36.28 1.85
2215 2541 3.928375 GGAAAATCCAGCGTCGTTACTTA 59.072 43.478 0.00 0.00 36.28 2.24
2216 2542 2.740447 GGAAAATCCAGCGTCGTTACTT 59.260 45.455 0.00 0.00 36.28 2.24
2217 2543 2.344025 GGAAAATCCAGCGTCGTTACT 58.656 47.619 0.00 0.00 36.28 2.24
2218 2544 1.060122 CGGAAAATCCAGCGTCGTTAC 59.940 52.381 0.00 0.00 35.91 2.50
2219 2545 1.352114 CGGAAAATCCAGCGTCGTTA 58.648 50.000 0.00 0.00 35.91 3.18
2220 2546 1.296056 CCGGAAAATCCAGCGTCGTT 61.296 55.000 0.00 0.00 35.91 3.85
2221 2547 1.740296 CCGGAAAATCCAGCGTCGT 60.740 57.895 0.00 0.00 35.91 4.34
2222 2548 3.089784 CCGGAAAATCCAGCGTCG 58.910 61.111 0.00 0.00 35.91 5.12
2223 2549 2.791927 GCCGGAAAATCCAGCGTC 59.208 61.111 5.05 0.00 35.91 5.19
2226 2552 2.750237 ACCGCCGGAAAATCCAGC 60.750 61.111 11.71 0.00 36.61 4.85
2227 2553 0.748005 ATGACCGCCGGAAAATCCAG 60.748 55.000 11.71 0.00 35.91 3.86
2228 2554 1.029408 CATGACCGCCGGAAAATCCA 61.029 55.000 11.71 0.00 35.91 3.41
2229 2555 1.724582 CCATGACCGCCGGAAAATCC 61.725 60.000 11.71 0.00 0.00 3.01
2230 2556 1.029947 ACCATGACCGCCGGAAAATC 61.030 55.000 11.71 0.00 0.00 2.17
2231 2557 0.610785 AACCATGACCGCCGGAAAAT 60.611 50.000 11.71 0.00 0.00 1.82
2232 2558 1.228306 AACCATGACCGCCGGAAAA 60.228 52.632 11.71 0.00 0.00 2.29
2233 2559 1.673009 GAACCATGACCGCCGGAAA 60.673 57.895 11.71 0.00 0.00 3.13
2234 2560 2.046700 GAACCATGACCGCCGGAA 60.047 61.111 11.71 0.00 0.00 4.30
2235 2561 2.884980 TTGAACCATGACCGCCGGA 61.885 57.895 11.71 0.00 0.00 5.14
2236 2562 2.359354 TTGAACCATGACCGCCGG 60.359 61.111 0.00 0.00 0.00 6.13
2237 2563 1.671054 AGTTGAACCATGACCGCCG 60.671 57.895 0.00 0.00 0.00 6.46
2238 2564 1.586154 CCAGTTGAACCATGACCGCC 61.586 60.000 0.00 0.00 0.00 6.13
2239 2565 0.889186 ACCAGTTGAACCATGACCGC 60.889 55.000 0.00 0.00 0.00 5.68
2240 2566 1.604604 AACCAGTTGAACCATGACCG 58.395 50.000 0.00 0.00 0.00 4.79
2241 2567 2.035832 CCAAACCAGTTGAACCATGACC 59.964 50.000 0.00 0.00 39.87 4.02
2242 2568 2.693074 ACCAAACCAGTTGAACCATGAC 59.307 45.455 0.00 0.00 39.87 3.06
2243 2569 3.025322 ACCAAACCAGTTGAACCATGA 57.975 42.857 0.00 0.00 39.87 3.07
2244 2570 3.384467 AGAACCAAACCAGTTGAACCATG 59.616 43.478 0.00 0.00 39.87 3.66
2245 2571 3.384467 CAGAACCAAACCAGTTGAACCAT 59.616 43.478 0.00 0.00 39.87 3.55
2246 2572 2.757868 CAGAACCAAACCAGTTGAACCA 59.242 45.455 0.00 0.00 39.87 3.67
2247 2573 2.758423 ACAGAACCAAACCAGTTGAACC 59.242 45.455 0.00 0.00 39.87 3.62
2248 2574 4.421058 GAACAGAACCAAACCAGTTGAAC 58.579 43.478 0.00 0.00 39.87 3.18
2249 2575 3.445805 GGAACAGAACCAAACCAGTTGAA 59.554 43.478 0.00 0.00 39.87 2.69
2250 2576 3.020984 GGAACAGAACCAAACCAGTTGA 58.979 45.455 0.00 0.00 39.87 3.18
2251 2577 2.757868 TGGAACAGAACCAAACCAGTTG 59.242 45.455 0.00 0.00 34.25 3.16
2252 2578 3.094484 TGGAACAGAACCAAACCAGTT 57.906 42.857 0.00 0.00 34.25 3.16
2253 2579 2.818751 TGGAACAGAACCAAACCAGT 57.181 45.000 0.00 0.00 34.25 4.00
2275 2601 9.496710 TGGGAGAGGAAGTATTTTGTTACTATA 57.503 33.333 0.00 0.00 32.16 1.31
2276 2602 8.388656 TGGGAGAGGAAGTATTTTGTTACTAT 57.611 34.615 0.00 0.00 32.16 2.12
2277 2603 7.801893 TGGGAGAGGAAGTATTTTGTTACTA 57.198 36.000 0.00 0.00 32.16 1.82
2278 2604 6.697641 TGGGAGAGGAAGTATTTTGTTACT 57.302 37.500 0.00 0.00 33.85 2.24
2279 2605 7.939784 ATTGGGAGAGGAAGTATTTTGTTAC 57.060 36.000 0.00 0.00 0.00 2.50
2280 2606 9.457436 GTAATTGGGAGAGGAAGTATTTTGTTA 57.543 33.333 0.00 0.00 0.00 2.41
2281 2607 8.170730 AGTAATTGGGAGAGGAAGTATTTTGTT 58.829 33.333 0.00 0.00 0.00 2.83
2282 2608 7.699878 AGTAATTGGGAGAGGAAGTATTTTGT 58.300 34.615 0.00 0.00 0.00 2.83
2283 2609 8.462016 CAAGTAATTGGGAGAGGAAGTATTTTG 58.538 37.037 0.00 0.00 0.00 2.44
2292 2618 5.783360 TGTAAGACAAGTAATTGGGAGAGGA 59.217 40.000 7.93 0.00 0.00 3.71
2297 2623 6.071616 GGCAAATGTAAGACAAGTAATTGGGA 60.072 38.462 7.93 0.00 0.00 4.37
2354 2680 7.893124 ATAATTCAAGACGGAGGAGTAAGTA 57.107 36.000 0.00 0.00 0.00 2.24
2358 2684 6.942976 ACAAATAATTCAAGACGGAGGAGTA 58.057 36.000 0.00 0.00 0.00 2.59
2359 2685 5.805728 ACAAATAATTCAAGACGGAGGAGT 58.194 37.500 0.00 0.00 0.00 3.85
2363 2689 4.330074 AGCGACAAATAATTCAAGACGGAG 59.670 41.667 0.00 0.00 0.00 4.63
2364 2690 4.250464 AGCGACAAATAATTCAAGACGGA 58.750 39.130 0.00 0.00 0.00 4.69
2365 2691 4.092821 TGAGCGACAAATAATTCAAGACGG 59.907 41.667 0.00 0.00 0.00 4.79
2366 2692 5.203358 TGAGCGACAAATAATTCAAGACG 57.797 39.130 0.00 0.00 0.00 4.18
2418 2744 8.236586 TGTTGTTCAAATGAATGTATCTAGCAC 58.763 33.333 0.00 0.00 36.33 4.40
2419 2745 8.334263 TGTTGTTCAAATGAATGTATCTAGCA 57.666 30.769 0.00 0.00 36.33 3.49
2420 2746 9.282247 CTTGTTGTTCAAATGAATGTATCTAGC 57.718 33.333 0.00 0.00 36.33 3.42
2430 2756 9.658799 TCCAAAATTACTTGTTGTTCAAATGAA 57.341 25.926 0.00 0.00 35.48 2.57
2431 2757 9.092876 GTCCAAAATTACTTGTTGTTCAAATGA 57.907 29.630 0.00 0.00 35.48 2.57
2432 2758 8.055402 CGTCCAAAATTACTTGTTGTTCAAATG 58.945 33.333 0.00 0.00 35.48 2.32
2433 2759 7.223777 CCGTCCAAAATTACTTGTTGTTCAAAT 59.776 33.333 0.00 0.00 35.48 2.32
2434 2760 6.531948 CCGTCCAAAATTACTTGTTGTTCAAA 59.468 34.615 0.00 0.00 35.48 2.69
2435 2761 6.037098 CCGTCCAAAATTACTTGTTGTTCAA 58.963 36.000 0.00 0.00 34.61 2.69
2436 2762 5.357314 TCCGTCCAAAATTACTTGTTGTTCA 59.643 36.000 0.00 0.00 0.00 3.18
2437 2763 5.823353 TCCGTCCAAAATTACTTGTTGTTC 58.177 37.500 0.00 0.00 0.00 3.18
2438 2764 5.221165 CCTCCGTCCAAAATTACTTGTTGTT 60.221 40.000 0.00 0.00 0.00 2.83
2439 2765 4.277423 CCTCCGTCCAAAATTACTTGTTGT 59.723 41.667 0.00 0.00 0.00 3.32
2440 2766 4.320935 CCCTCCGTCCAAAATTACTTGTTG 60.321 45.833 0.00 0.00 0.00 3.33
2441 2767 3.824443 CCCTCCGTCCAAAATTACTTGTT 59.176 43.478 0.00 0.00 0.00 2.83
2442 2768 3.073356 TCCCTCCGTCCAAAATTACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
2443 2769 3.681593 TCCCTCCGTCCAAAATTACTTG 58.318 45.455 0.00 0.00 0.00 3.16
2444 2770 3.329814 ACTCCCTCCGTCCAAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
2445 2771 2.910977 ACTCCCTCCGTCCAAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2446 2772 3.345508 ACTCCCTCCGTCCAAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2449 2775 2.547990 AGTACTCCCTCCGTCCAAAAT 58.452 47.619 0.00 0.00 0.00 1.82
2452 2778 1.684248 GCTAGTACTCCCTCCGTCCAA 60.684 57.143 0.00 0.00 0.00 3.53
2454 2780 0.822944 GGCTAGTACTCCCTCCGTCC 60.823 65.000 0.00 0.00 0.00 4.79
2455 2781 0.106819 TGGCTAGTACTCCCTCCGTC 60.107 60.000 0.00 0.00 0.00 4.79
2458 2784 1.485480 GGTTTGGCTAGTACTCCCTCC 59.515 57.143 0.00 3.00 0.00 4.30
2470 2796 2.116125 GCTGGAGGTGGTTTGGCT 59.884 61.111 0.00 0.00 0.00 4.75
2471 2797 2.203480 TGCTGGAGGTGGTTTGGC 60.203 61.111 0.00 0.00 0.00 4.52
2473 2799 0.466189 ACTGTGCTGGAGGTGGTTTG 60.466 55.000 0.00 0.00 0.00 2.93
2501 2831 3.415212 TCTGATGGAAGGCTGAACTTTG 58.585 45.455 0.00 0.00 0.00 2.77
2520 2850 4.881850 ACGATGCGGATTTTATTCCTTTCT 59.118 37.500 0.00 0.00 33.30 2.52
2521 2851 5.169836 ACGATGCGGATTTTATTCCTTTC 57.830 39.130 0.00 0.00 33.30 2.62
2560 2890 2.101917 CGGTCTTACGGGGATTACACAT 59.898 50.000 0.00 0.00 0.00 3.21
2575 2905 4.699637 TGACTTGTAATGTTCACGGTCTT 58.300 39.130 0.00 0.00 0.00 3.01
2578 2908 2.806244 GCTGACTTGTAATGTTCACGGT 59.194 45.455 0.00 0.00 0.00 4.83
2617 2955 1.874872 CTGGTAGCCTCTAGTACTCGC 59.125 57.143 0.00 0.00 0.00 5.03
2679 3017 7.554118 GTCCTCTTGTTCATAAATGATCTTGGA 59.446 37.037 0.00 0.00 36.56 3.53
2753 3091 7.579761 TTGGCCTCATTTGCTTTTTATTTTT 57.420 28.000 3.32 0.00 0.00 1.94
2754 3092 7.579761 TTTGGCCTCATTTGCTTTTTATTTT 57.420 28.000 3.32 0.00 0.00 1.82
2755 3093 7.579761 TTTTGGCCTCATTTGCTTTTTATTT 57.420 28.000 3.32 0.00 0.00 1.40
2756 3094 7.424803 GTTTTTGGCCTCATTTGCTTTTTATT 58.575 30.769 3.32 0.00 0.00 1.40
2757 3095 6.293353 CGTTTTTGGCCTCATTTGCTTTTTAT 60.293 34.615 3.32 0.00 0.00 1.40
2758 3096 5.007136 CGTTTTTGGCCTCATTTGCTTTTTA 59.993 36.000 3.32 0.00 0.00 1.52
2759 3097 4.201901 CGTTTTTGGCCTCATTTGCTTTTT 60.202 37.500 3.32 0.00 0.00 1.94
2760 3098 3.312146 CGTTTTTGGCCTCATTTGCTTTT 59.688 39.130 3.32 0.00 0.00 2.27
2761 3099 2.871633 CGTTTTTGGCCTCATTTGCTTT 59.128 40.909 3.32 0.00 0.00 3.51
2762 3100 2.102252 TCGTTTTTGGCCTCATTTGCTT 59.898 40.909 3.32 0.00 0.00 3.91
2763 3101 1.686052 TCGTTTTTGGCCTCATTTGCT 59.314 42.857 3.32 0.00 0.00 3.91
2764 3102 2.061028 CTCGTTTTTGGCCTCATTTGC 58.939 47.619 3.32 0.00 0.00 3.68
2765 3103 2.061028 GCTCGTTTTTGGCCTCATTTG 58.939 47.619 3.32 0.00 0.00 2.32
2766 3104 1.686052 TGCTCGTTTTTGGCCTCATTT 59.314 42.857 3.32 0.00 0.00 2.32
2767 3105 1.327303 TGCTCGTTTTTGGCCTCATT 58.673 45.000 3.32 0.00 0.00 2.57
2768 3106 1.549203 ATGCTCGTTTTTGGCCTCAT 58.451 45.000 3.32 0.00 0.00 2.90
2769 3107 1.810151 GTATGCTCGTTTTTGGCCTCA 59.190 47.619 3.32 0.00 0.00 3.86
2770 3108 2.084546 AGTATGCTCGTTTTTGGCCTC 58.915 47.619 3.32 0.00 0.00 4.70
2771 3109 2.084546 GAGTATGCTCGTTTTTGGCCT 58.915 47.619 3.32 0.00 31.39 5.19
2772 3110 1.132453 GGAGTATGCTCGTTTTTGGCC 59.868 52.381 4.63 0.00 42.53 5.36
2773 3111 1.132453 GGGAGTATGCTCGTTTTTGGC 59.868 52.381 4.63 0.00 42.53 4.52
2774 3112 1.743394 GGGGAGTATGCTCGTTTTTGG 59.257 52.381 4.63 0.00 42.53 3.28
2775 3113 1.743394 GGGGGAGTATGCTCGTTTTTG 59.257 52.381 4.63 0.00 42.53 2.44
2776 3114 1.633945 AGGGGGAGTATGCTCGTTTTT 59.366 47.619 4.63 0.00 42.53 1.94
2777 3115 1.065418 CAGGGGGAGTATGCTCGTTTT 60.065 52.381 4.63 0.00 42.53 2.43
2778 3116 0.541863 CAGGGGGAGTATGCTCGTTT 59.458 55.000 4.63 0.00 42.53 3.60
2817 3155 0.387878 GCTATCGTCCCATCTCAGCG 60.388 60.000 0.00 0.00 0.00 5.18
2853 3197 4.617520 TGGAACTGCGCCGCTGAA 62.618 61.111 22.90 2.46 0.00 3.02
2862 3223 2.751166 TGAGCTAGAACTGGAACTGC 57.249 50.000 0.00 0.00 0.00 4.40
2864 3225 7.398024 ACATATTTTGAGCTAGAACTGGAACT 58.602 34.615 0.00 0.00 0.00 3.01
2869 3230 7.810658 ACACAACATATTTTGAGCTAGAACTG 58.189 34.615 8.57 0.00 0.00 3.16
2887 3248 3.311322 GGAAACATGACTCGAACACAACA 59.689 43.478 0.00 0.00 0.00 3.33
2899 3260 1.878953 ACAGACGTGGGAAACATGAC 58.121 50.000 0.00 0.00 39.46 3.06
2934 3298 2.712057 CTGAAATCCAGCGCAAAGTT 57.288 45.000 11.47 0.00 35.89 2.66
2952 3316 8.408601 CCAAGTAGATATATTTTGTGCTTTGCT 58.591 33.333 0.00 0.00 0.00 3.91
2977 3341 4.404654 CGCGAAGGCTGGCAAACC 62.405 66.667 0.00 0.00 36.88 3.27
2978 3342 3.595108 GACGCGAAGGCTGGCAAAC 62.595 63.158 15.93 0.00 36.88 2.93
2979 3343 3.353836 GACGCGAAGGCTGGCAAA 61.354 61.111 15.93 0.00 36.88 3.68
2983 3347 3.121030 CAAGGACGCGAAGGCTGG 61.121 66.667 15.93 0.00 36.88 4.85
2984 3348 2.357517 ACAAGGACGCGAAGGCTG 60.358 61.111 15.93 5.74 36.88 4.85
2985 3349 2.357517 CACAAGGACGCGAAGGCT 60.358 61.111 15.93 0.00 36.88 4.58
2986 3350 2.357034 TCACAAGGACGCGAAGGC 60.357 61.111 15.93 0.00 0.00 4.35
2987 3351 3.550656 GTCACAAGGACGCGAAGG 58.449 61.111 15.93 0.00 36.65 3.46
3002 3442 4.193826 TGTCTGCTCATCTTGGTTAGTC 57.806 45.455 0.00 0.00 0.00 2.59
3035 3475 9.377312 GAGTCATTAGTTATCTGCTCTCTTTTT 57.623 33.333 0.00 0.00 0.00 1.94
3036 3476 7.704472 CGAGTCATTAGTTATCTGCTCTCTTTT 59.296 37.037 0.00 0.00 0.00 2.27
3037 3477 7.147983 ACGAGTCATTAGTTATCTGCTCTCTTT 60.148 37.037 0.00 0.00 0.00 2.52
3038 3478 6.320164 ACGAGTCATTAGTTATCTGCTCTCTT 59.680 38.462 0.00 0.00 0.00 2.85
3039 3479 5.825679 ACGAGTCATTAGTTATCTGCTCTCT 59.174 40.000 0.00 0.00 0.00 3.10
3040 3480 6.067263 ACGAGTCATTAGTTATCTGCTCTC 57.933 41.667 0.00 0.00 0.00 3.20
3041 3481 6.095580 TGAACGAGTCATTAGTTATCTGCTCT 59.904 38.462 0.00 0.00 0.00 4.09
3234 3675 2.028476 GGGTTTCAGGTTTGGGTAATGC 60.028 50.000 0.00 0.00 0.00 3.56
3237 3678 1.984066 CGGGTTTCAGGTTTGGGTAA 58.016 50.000 0.00 0.00 0.00 2.85
3420 3866 4.813697 GGAATGGTCTAGCTCAGATTTCAC 59.186 45.833 0.00 0.00 35.17 3.18
3447 3893 5.774690 TGGACAATGGAACTAGCTCATTTTT 59.225 36.000 0.00 0.00 0.00 1.94
3450 3896 4.574674 TGGACAATGGAACTAGCTCATT 57.425 40.909 0.00 0.00 0.00 2.57
3486 3932 5.564651 CGCCAACTTTTCACCAATCTAACAT 60.565 40.000 0.00 0.00 0.00 2.71
3509 3955 5.334105 CCTCAAATTTGGATAGCGTATTCCG 60.334 44.000 17.90 0.00 40.40 4.30
3514 3960 3.876914 CAGCCTCAAATTTGGATAGCGTA 59.123 43.478 17.90 0.00 0.00 4.42
3613 4059 3.181475 TGGAGCTCTACCGCTTAGAAATG 60.181 47.826 14.64 0.00 41.08 2.32
3615 4061 2.427453 CTGGAGCTCTACCGCTTAGAAA 59.573 50.000 14.64 0.00 41.08 2.52
3690 4138 3.483421 CTTTTTGTCCGTCCCCTAAACT 58.517 45.455 0.00 0.00 0.00 2.66
3704 4152 1.228429 TGCGGGGCTAGCTTTTTGT 60.228 52.632 15.72 0.00 35.28 2.83
3743 4198 3.244911 ACTCATCCCCACAAGAAAATCGT 60.245 43.478 0.00 0.00 0.00 3.73
3763 4220 4.081697 CACTGGGTTTTGTCTTTCCAAACT 60.082 41.667 0.00 0.00 34.23 2.66
3770 4227 4.142469 CGAAACTCACTGGGTTTTGTCTTT 60.142 41.667 8.47 0.00 37.07 2.52
3774 4231 2.718563 ACGAAACTCACTGGGTTTTGT 58.281 42.857 18.40 18.40 42.79 2.83
3796 4253 0.605319 GGTGTCAAGATGGCAACGGA 60.605 55.000 0.00 0.00 31.67 4.69
3816 4273 2.223595 CGACGATGACAGTAGGCAAGAT 60.224 50.000 0.00 0.00 0.00 2.40
3817 4274 1.132453 CGACGATGACAGTAGGCAAGA 59.868 52.381 0.00 0.00 0.00 3.02
3818 4275 1.135373 ACGACGATGACAGTAGGCAAG 60.135 52.381 0.00 0.00 0.00 4.01
3819 4276 0.885879 ACGACGATGACAGTAGGCAA 59.114 50.000 0.00 0.00 0.00 4.52
3820 4277 0.885879 AACGACGATGACAGTAGGCA 59.114 50.000 0.00 0.00 0.00 4.75
3821 4278 1.918609 GAAACGACGATGACAGTAGGC 59.081 52.381 0.00 0.00 0.00 3.93
3917 4382 0.322366 TGTCGCATTTCATGGGCAGA 60.322 50.000 0.00 0.00 42.34 4.26
3977 4442 1.452025 CTCGACGTTGTGCAGTGTTAG 59.548 52.381 1.96 0.00 0.00 2.34
4057 4538 0.753262 GGTGACGTGGGATCATAGCT 59.247 55.000 0.00 0.00 0.00 3.32
4058 4539 0.249911 GGGTGACGTGGGATCATAGC 60.250 60.000 0.00 0.00 0.00 2.97
4060 4541 0.828022 GTGGGTGACGTGGGATCATA 59.172 55.000 0.00 0.00 0.00 2.15
4120 5961 6.497624 AAGCTCCTAGTGATGATCTGAAAT 57.502 37.500 0.00 0.00 0.00 2.17
4134 5975 6.993079 ACAATTTGGGTTTTTAAGCTCCTAG 58.007 36.000 0.78 0.00 0.00 3.02
4151 5994 2.802787 TGGGTTACGCCAACAATTTG 57.197 45.000 0.00 0.00 39.04 2.32
4178 6021 1.087501 GAACTGCTCGATTTGGGGAC 58.912 55.000 0.00 0.00 0.00 4.46
4183 6026 2.416747 TCACTGGAACTGCTCGATTTG 58.583 47.619 0.00 0.00 0.00 2.32
4192 6037 0.524862 GCTTGGCATCACTGGAACTG 59.475 55.000 0.00 0.00 0.00 3.16
4203 6048 2.921972 TTTTGGCGGGCTTGGCAT 60.922 55.556 2.38 0.00 44.53 4.40
4216 6061 6.885735 AATTGTTGTTCTTCCTTCGTTTTG 57.114 33.333 0.00 0.00 0.00 2.44
4221 6066 6.306356 CAGCAATAATTGTTGTTCTTCCTTCG 59.694 38.462 15.30 0.00 37.15 3.79
4244 6090 4.797800 TCTCATGAGTTCTTGAGGACAG 57.202 45.455 21.92 0.00 43.95 3.51
4248 6094 5.105023 TCCTTCATCTCATGAGTTCTTGAGG 60.105 44.000 21.92 19.55 43.95 3.86
4253 6099 6.213195 ACTCTTTCCTTCATCTCATGAGTTCT 59.787 38.462 21.92 6.05 40.94 3.01
4296 6142 0.693049 ATGGAGCCGAGAAACAGGTT 59.307 50.000 0.00 0.00 0.00 3.50
4325 6171 1.361668 AATTGCTGCGCGATCGAAGT 61.362 50.000 21.57 0.00 43.35 3.01
4329 6175 0.508213 TGATAATTGCTGCGCGATCG 59.492 50.000 12.10 11.69 30.45 3.69
4338 6184 1.151777 CGCCGTCGGTGATAATTGCT 61.152 55.000 20.30 0.00 34.74 3.91
4341 6187 0.529119 GGTCGCCGTCGGTGATAATT 60.529 55.000 28.90 0.00 44.40 1.40
4370 6216 0.603707 CTTGCTGAAAGAGGCGTCCA 60.604 55.000 2.06 0.00 38.24 4.02
4428 6274 1.536073 CCGACTTGAGCTCCTCCACA 61.536 60.000 12.15 0.00 0.00 4.17
4566 6412 1.839894 GGCGGGGATCTTGAAGGAT 59.160 57.895 0.00 0.00 0.00 3.24
4620 6466 1.162698 CGTAGACGAAGAGGGTGACA 58.837 55.000 0.00 0.00 43.02 3.58
4815 6661 2.603473 TACACAGACAGCGGGGCT 60.603 61.111 0.00 0.00 40.77 5.19
4944 6796 2.264166 GACAGCCAGAAGAGCGCT 59.736 61.111 11.27 11.27 34.64 5.92
5048 6900 0.609681 GCCCCGGTTAATGTTGTCCA 60.610 55.000 0.00 0.00 0.00 4.02
5058 6910 1.073548 GTCCAACTTGCCCCGGTTA 59.926 57.895 0.00 0.00 0.00 2.85
5064 6916 2.861147 AGAAGTAGTCCAACTTGCCC 57.139 50.000 0.00 0.00 39.78 5.36
5188 7040 1.352352 CTCCACCATGGACTTGTCCTT 59.648 52.381 21.47 11.20 42.67 3.36
5264 7116 1.285280 AGGCCAGTACCTGCATGTAA 58.715 50.000 5.01 0.00 39.13 2.41
5267 7119 0.533755 GCTAGGCCAGTACCTGCATG 60.534 60.000 5.01 0.00 41.34 4.06
5301 7154 5.533903 GCATTCACCTCCATCTTCACATATT 59.466 40.000 0.00 0.00 0.00 1.28
5304 7157 3.285484 GCATTCACCTCCATCTTCACAT 58.715 45.455 0.00 0.00 0.00 3.21
5325 7178 6.016024 CCCATACAAACCCTGAATGACATATG 60.016 42.308 0.00 0.00 0.00 1.78
5379 7233 3.207265 TCAACTTGGCAACTTGCTAGA 57.793 42.857 13.43 0.00 44.28 2.43
5400 7254 7.290857 CACTAAATTGCATAGTGTTACTCGT 57.709 36.000 15.03 0.00 43.31 4.18
5532 7575 7.902087 AGAAACCTGATATTAGCTCTCCATAC 58.098 38.462 0.00 0.00 0.00 2.39
5618 7701 3.383620 TTGGTCACATGAATTTGCCAC 57.616 42.857 0.00 0.00 0.00 5.01
5636 7719 8.484799 CAGATTGTTTCTGTCATTGACAAATTG 58.515 33.333 19.44 8.85 45.79 2.32
5731 7814 8.560355 AACAATGACTGTGTTGCTATGTATTA 57.440 30.769 0.00 0.00 38.67 0.98
5755 7838 7.225931 GCTTTATTCGATAAGTCCACATGGTAA 59.774 37.037 0.00 0.00 36.34 2.85
5756 7839 6.704493 GCTTTATTCGATAAGTCCACATGGTA 59.296 38.462 0.00 0.00 36.34 3.25
5769 7874 5.124617 TGCACAACAATGGCTTTATTCGATA 59.875 36.000 0.00 0.00 0.00 2.92
5846 7951 3.496337 CCATATCTGACCTGCAGCATCTT 60.496 47.826 8.66 0.96 44.52 2.40
5926 8040 2.473760 CGTCCGATCGACCAGAGCT 61.474 63.158 18.66 0.00 38.36 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.