Multiple sequence alignment - TraesCS7B01G113300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G113300 chr7B 100.000 3473 0 0 1 3473 131180164 131176692 0.000000e+00 6414
1 TraesCS7B01G113300 chr7B 76.392 1042 199 35 1364 2392 130747019 130746012 5.140000e-143 518
2 TraesCS7B01G113300 chr7A 93.617 2021 106 13 891 2902 168461161 168459155 0.000000e+00 2996
3 TraesCS7B01G113300 chr7A 76.442 1040 202 32 1364 2392 167904377 167903370 1.100000e-144 523
4 TraesCS7B01G113300 chr7D 96.354 1810 48 6 953 2753 167078629 167076829 0.000000e+00 2961
5 TraesCS7B01G113300 chr7D 76.442 1040 202 32 1364 2392 166514005 166512998 1.100000e-144 523
6 TraesCS7B01G113300 chr7D 97.297 74 2 0 1 74 167078730 167078657 3.640000e-25 126
7 TraesCS7B01G113300 chr2B 95.971 819 27 6 74 887 664342123 664342940 0.000000e+00 1325
8 TraesCS7B01G113300 chr2B 91.020 245 19 2 3216 3460 393104741 393104500 9.290000e-86 327
9 TraesCS7B01G113300 chr4A 95.349 817 33 4 75 887 722668461 722667646 0.000000e+00 1293
10 TraesCS7B01G113300 chr3B 94.909 825 27 4 75 894 32992977 32992163 0.000000e+00 1277
11 TraesCS7B01G113300 chr4B 92.289 817 57 5 75 887 20229751 20228937 0.000000e+00 1155
12 TraesCS7B01G113300 chr4B 78.603 458 82 10 72 526 596770497 596770941 4.390000e-74 289
13 TraesCS7B01G113300 chr6A 75.712 1194 234 44 1225 2402 525030861 525029708 6.550000e-152 547
14 TraesCS7B01G113300 chr6D 75.397 1195 236 51 1225 2402 383227981 383226828 3.070000e-145 525
15 TraesCS7B01G113300 chr6D 96.000 225 9 0 3216 3440 52496198 52495974 1.970000e-97 366
16 TraesCS7B01G113300 chr6D 96.000 225 9 0 3216 3440 52532062 52531838 1.970000e-97 366
17 TraesCS7B01G113300 chr6B 75.293 1194 235 53 1225 2400 573414846 573413695 1.850000e-142 516
18 TraesCS7B01G113300 chr1A 74.071 1184 246 46 1225 2391 559707826 559706687 2.480000e-116 429
19 TraesCS7B01G113300 chr3D 95.595 227 10 0 3216 3442 110297217 110296991 7.080000e-97 364
20 TraesCS7B01G113300 chr3D 95.089 224 7 3 3215 3435 110284049 110283827 1.980000e-92 350
21 TraesCS7B01G113300 chr2D 96.774 217 7 0 3216 3432 50338717 50338933 2.550000e-96 363
22 TraesCS7B01G113300 chr2D 95.111 225 11 0 3216 3440 50243802 50244026 4.260000e-94 355
23 TraesCS7B01G113300 chr2D 92.373 236 18 0 3216 3451 40915855 40916090 1.540000e-88 337
24 TraesCS7B01G113300 chr5A 91.250 240 19 2 3213 3451 698693126 698693364 3.340000e-85 326


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G113300 chr7B 131176692 131180164 3472 True 6414.0 6414 100.0000 1 3473 1 chr7B.!!$R2 3472
1 TraesCS7B01G113300 chr7B 130746012 130747019 1007 True 518.0 518 76.3920 1364 2392 1 chr7B.!!$R1 1028
2 TraesCS7B01G113300 chr7A 168459155 168461161 2006 True 2996.0 2996 93.6170 891 2902 1 chr7A.!!$R2 2011
3 TraesCS7B01G113300 chr7A 167903370 167904377 1007 True 523.0 523 76.4420 1364 2392 1 chr7A.!!$R1 1028
4 TraesCS7B01G113300 chr7D 167076829 167078730 1901 True 1543.5 2961 96.8255 1 2753 2 chr7D.!!$R2 2752
5 TraesCS7B01G113300 chr7D 166512998 166514005 1007 True 523.0 523 76.4420 1364 2392 1 chr7D.!!$R1 1028
6 TraesCS7B01G113300 chr2B 664342123 664342940 817 False 1325.0 1325 95.9710 74 887 1 chr2B.!!$F1 813
7 TraesCS7B01G113300 chr4A 722667646 722668461 815 True 1293.0 1293 95.3490 75 887 1 chr4A.!!$R1 812
8 TraesCS7B01G113300 chr3B 32992163 32992977 814 True 1277.0 1277 94.9090 75 894 1 chr3B.!!$R1 819
9 TraesCS7B01G113300 chr4B 20228937 20229751 814 True 1155.0 1155 92.2890 75 887 1 chr4B.!!$R1 812
10 TraesCS7B01G113300 chr6A 525029708 525030861 1153 True 547.0 547 75.7120 1225 2402 1 chr6A.!!$R1 1177
11 TraesCS7B01G113300 chr6D 383226828 383227981 1153 True 525.0 525 75.3970 1225 2402 1 chr6D.!!$R3 1177
12 TraesCS7B01G113300 chr6B 573413695 573414846 1151 True 516.0 516 75.2930 1225 2400 1 chr6B.!!$R1 1175
13 TraesCS7B01G113300 chr1A 559706687 559707826 1139 True 429.0 429 74.0710 1225 2391 1 chr1A.!!$R1 1166

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
925 936 1.743321 CGGCTGCCTTCCAACCAAAA 61.743 55.0 17.92 0.0 29.78 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2856 2916 0.108281 GGGGAACTCGGAACTAGCAC 60.108 60.0 0.0 0.0 0.0 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 99 3.009473 AGAATGTATCCAGTGCACCAGTT 59.991 43.478 14.63 2.85 0.00 3.16
208 210 5.957842 ACATTTGCGAAAAAGACCTCATA 57.042 34.783 0.00 0.00 0.00 2.15
318 327 7.345691 TGGTCATATATCTTGAACCACACATT 58.654 34.615 2.18 0.00 29.40 2.71
384 393 5.155509 TGTTCGAAACAAGATCAGTGTTG 57.844 39.130 13.67 3.66 39.14 3.33
491 501 7.823745 ATTCTATGTGTTTTTGAACTCTGGT 57.176 32.000 0.00 0.00 0.00 4.00
643 654 5.336744 TGACAGTCAAAACGGATTCAAAAC 58.663 37.500 0.00 0.00 0.00 2.43
757 768 7.062371 GCGCAGGTTGAATGTTATAGTCTATAG 59.938 40.741 0.30 0.00 0.00 1.31
808 819 5.192927 CAACCTATGGCAAAATCTAGTCCA 58.807 41.667 0.00 0.00 0.00 4.02
925 936 1.743321 CGGCTGCCTTCCAACCAAAA 61.743 55.000 17.92 0.00 29.78 2.44
936 947 5.510690 CCTTCCAACCAAAAATACACTTCCC 60.511 44.000 0.00 0.00 0.00 3.97
941 952 5.319043 ACCAAAAATACACTTCCCTCTCA 57.681 39.130 0.00 0.00 0.00 3.27
1210 1229 3.740321 CGTCGTACTAGTCCTCTACATCC 59.260 52.174 0.00 0.00 0.00 3.51
1220 1239 0.381089 CTCTACATCCGGTCGACCAC 59.619 60.000 32.80 8.60 35.14 4.16
1597 1616 2.677524 TAGTGCGCAGGTACGGGT 60.678 61.111 12.22 0.00 33.56 5.28
1905 1924 4.547905 CACGACGACCGCGCCTAT 62.548 66.667 0.00 0.00 43.32 2.57
2651 2671 2.419324 AGACGAGTAGATGAACGGTGTC 59.581 50.000 0.00 0.00 0.00 3.67
2666 2686 2.352030 CGGTGTCTTTTTCTGCATGCAT 60.352 45.455 22.97 0.00 0.00 3.96
2689 2709 6.104146 TGCCATGATTTATGATGGGATTTG 57.896 37.500 9.74 0.00 41.20 2.32
2723 2743 2.600420 CAGCTATGTACGTCTTGTGCAG 59.400 50.000 0.00 0.00 46.65 4.41
2727 2747 1.428448 TGTACGTCTTGTGCAGATGC 58.572 50.000 0.00 0.00 41.81 3.91
2728 2748 1.000843 TGTACGTCTTGTGCAGATGCT 59.999 47.619 6.35 0.00 41.81 3.79
2744 2764 5.583854 GCAGATGCTCATCTCAACTTTTCTA 59.416 40.000 9.28 0.00 45.78 2.10
2772 2792 4.500375 CCTTTTCCTCTTTGCTTTCCACAG 60.500 45.833 0.00 0.00 0.00 3.66
2801 2861 9.847224 AGATTGGAATAAGTAATTTACGGATGT 57.153 29.630 1.03 0.00 0.00 3.06
2811 2871 9.915629 AAGTAATTTACGGATGTTATTTTTGCA 57.084 25.926 1.03 0.00 0.00 4.08
2812 2872 9.915629 AGTAATTTACGGATGTTATTTTTGCAA 57.084 25.926 0.00 0.00 0.00 4.08
2817 2877 8.649973 TTACGGATGTTATTTTTGCAAAAAGT 57.350 26.923 33.47 25.81 40.78 2.66
2818 2878 9.745880 TTACGGATGTTATTTTTGCAAAAAGTA 57.254 25.926 33.47 25.00 40.78 2.24
2819 2879 8.649973 ACGGATGTTATTTTTGCAAAAAGTAA 57.350 26.923 33.47 26.90 40.78 2.24
2820 2880 9.099454 ACGGATGTTATTTTTGCAAAAAGTAAA 57.901 25.926 33.47 25.36 40.78 2.01
2821 2881 9.922305 CGGATGTTATTTTTGCAAAAAGTAAAA 57.078 25.926 33.47 25.73 40.78 1.52
2848 2908 1.138266 ACGGGTATCCATTCCAACGAG 59.862 52.381 0.00 0.00 0.00 4.18
2850 2910 1.594331 GGTATCCATTCCAACGAGCC 58.406 55.000 0.00 0.00 0.00 4.70
2854 2914 3.795688 ATCCATTCCAACGAGCCATAT 57.204 42.857 0.00 0.00 0.00 1.78
2855 2915 3.126001 TCCATTCCAACGAGCCATATC 57.874 47.619 0.00 0.00 0.00 1.63
2866 2926 2.678324 GAGCCATATCGTGCTAGTTCC 58.322 52.381 0.00 0.00 38.11 3.62
2880 2941 0.473117 AGTTCCGAGTTCCCCTTCCA 60.473 55.000 0.00 0.00 0.00 3.53
2883 2944 0.909623 TCCGAGTTCCCCTTCCATTC 59.090 55.000 0.00 0.00 0.00 2.67
2902 2963 3.126001 TCTCGGTGCAACTTTTCATCT 57.874 42.857 0.00 0.00 36.74 2.90
2903 2964 3.476552 TCTCGGTGCAACTTTTCATCTT 58.523 40.909 0.00 0.00 36.74 2.40
2904 2965 3.250762 TCTCGGTGCAACTTTTCATCTTG 59.749 43.478 0.00 0.00 36.74 3.02
2905 2966 2.053627 CGGTGCAACTTTTCATCTTGC 58.946 47.619 0.00 0.00 40.63 4.01
2906 2967 2.407090 GGTGCAACTTTTCATCTTGCC 58.593 47.619 0.00 0.00 39.69 4.52
2907 2968 2.407090 GTGCAACTTTTCATCTTGCCC 58.593 47.619 0.00 0.00 39.69 5.36
2908 2969 2.036346 GTGCAACTTTTCATCTTGCCCT 59.964 45.455 0.00 0.00 39.69 5.19
2909 2970 3.255642 GTGCAACTTTTCATCTTGCCCTA 59.744 43.478 0.00 0.00 39.69 3.53
2910 2971 3.894427 TGCAACTTTTCATCTTGCCCTAA 59.106 39.130 0.00 0.00 39.69 2.69
2911 2972 4.527816 TGCAACTTTTCATCTTGCCCTAAT 59.472 37.500 0.00 0.00 39.69 1.73
2912 2973 5.714333 TGCAACTTTTCATCTTGCCCTAATA 59.286 36.000 0.00 0.00 39.69 0.98
2913 2974 6.210385 TGCAACTTTTCATCTTGCCCTAATAA 59.790 34.615 0.00 0.00 39.69 1.40
2914 2975 7.093377 TGCAACTTTTCATCTTGCCCTAATAAT 60.093 33.333 0.00 0.00 39.69 1.28
2915 2976 8.413229 GCAACTTTTCATCTTGCCCTAATAATA 58.587 33.333 0.00 0.00 35.29 0.98
2919 2980 9.971922 CTTTTCATCTTGCCCTAATAATAAAGG 57.028 33.333 0.00 0.00 0.00 3.11
2920 2981 9.707957 TTTTCATCTTGCCCTAATAATAAAGGA 57.292 29.630 0.00 0.00 34.58 3.36
2921 2982 9.881773 TTTCATCTTGCCCTAATAATAAAGGAT 57.118 29.630 0.00 0.00 34.58 3.24
2922 2983 9.520515 TTCATCTTGCCCTAATAATAAAGGATC 57.479 33.333 0.00 0.00 34.58 3.36
2923 2984 8.109634 TCATCTTGCCCTAATAATAAAGGATCC 58.890 37.037 2.48 2.48 34.58 3.36
2924 2985 7.401060 TCTTGCCCTAATAATAAAGGATCCA 57.599 36.000 15.82 0.00 34.58 3.41
2925 2986 8.000171 TCTTGCCCTAATAATAAAGGATCCAT 58.000 34.615 15.82 0.00 34.58 3.41
2926 2987 8.456124 TCTTGCCCTAATAATAAAGGATCCATT 58.544 33.333 15.82 11.41 34.58 3.16
2927 2988 9.093458 CTTGCCCTAATAATAAAGGATCCATTT 57.907 33.333 15.82 13.49 34.58 2.32
2928 2989 9.445973 TTGCCCTAATAATAAAGGATCCATTTT 57.554 29.630 15.82 9.34 34.58 1.82
2929 2990 9.445973 TGCCCTAATAATAAAGGATCCATTTTT 57.554 29.630 15.82 12.22 34.58 1.94
2950 3011 7.985634 TTTTTGCTAATAAAGGATCGATTGC 57.014 32.000 0.00 0.00 0.00 3.56
2951 3012 6.942532 TTTGCTAATAAAGGATCGATTGCT 57.057 33.333 0.00 0.00 0.00 3.91
2952 3013 6.942532 TTGCTAATAAAGGATCGATTGCTT 57.057 33.333 0.00 0.00 37.65 3.91
2953 3014 6.545504 TGCTAATAAAGGATCGATTGCTTC 57.454 37.500 0.00 0.00 34.49 3.86
2954 3015 5.470098 TGCTAATAAAGGATCGATTGCTTCC 59.530 40.000 0.00 0.00 34.49 3.46
2955 3016 5.389935 GCTAATAAAGGATCGATTGCTTCCG 60.390 44.000 0.00 0.00 34.49 4.30
2956 3017 1.668419 AAAGGATCGATTGCTTCCGG 58.332 50.000 0.00 0.00 34.49 5.14
2957 3018 0.541863 AAGGATCGATTGCTTCCGGT 59.458 50.000 0.00 0.00 28.35 5.28
2958 3019 0.105039 AGGATCGATTGCTTCCGGTC 59.895 55.000 0.00 0.00 35.37 4.79
2959 3020 1.215655 GGATCGATTGCTTCCGGTCG 61.216 60.000 0.00 1.74 36.83 4.79
2960 3021 0.527817 GATCGATTGCTTCCGGTCGT 60.528 55.000 0.00 0.00 35.71 4.34
2961 3022 0.742505 ATCGATTGCTTCCGGTCGTA 59.257 50.000 0.00 0.00 35.71 3.43
2962 3023 0.179156 TCGATTGCTTCCGGTCGTAC 60.179 55.000 0.00 0.00 35.71 3.67
2963 3024 1.469126 CGATTGCTTCCGGTCGTACG 61.469 60.000 9.53 9.53 0.00 3.67
2964 3025 0.457337 GATTGCTTCCGGTCGTACGT 60.457 55.000 16.05 0.00 0.00 3.57
2965 3026 0.457337 ATTGCTTCCGGTCGTACGTC 60.457 55.000 16.05 9.80 0.00 4.34
2966 3027 1.794151 TTGCTTCCGGTCGTACGTCA 61.794 55.000 16.05 0.00 0.00 4.35
2967 3028 1.138247 GCTTCCGGTCGTACGTCAT 59.862 57.895 16.05 0.00 0.00 3.06
2968 3029 0.457337 GCTTCCGGTCGTACGTCATT 60.457 55.000 16.05 0.00 0.00 2.57
2969 3030 1.202177 GCTTCCGGTCGTACGTCATTA 60.202 52.381 16.05 0.00 0.00 1.90
2970 3031 2.542411 GCTTCCGGTCGTACGTCATTAT 60.542 50.000 16.05 0.00 0.00 1.28
2971 3032 3.699067 CTTCCGGTCGTACGTCATTATT 58.301 45.455 16.05 0.00 0.00 1.40
2972 3033 4.789481 GCTTCCGGTCGTACGTCATTATTA 60.789 45.833 16.05 0.00 0.00 0.98
2973 3034 4.891627 TCCGGTCGTACGTCATTATTAA 57.108 40.909 16.05 0.00 0.00 1.40
2974 3035 5.437289 TCCGGTCGTACGTCATTATTAAT 57.563 39.130 16.05 0.00 0.00 1.40
2975 3036 5.830912 TCCGGTCGTACGTCATTATTAATT 58.169 37.500 16.05 0.00 0.00 1.40
2976 3037 6.272318 TCCGGTCGTACGTCATTATTAATTT 58.728 36.000 16.05 0.00 0.00 1.82
2977 3038 6.756074 TCCGGTCGTACGTCATTATTAATTTT 59.244 34.615 16.05 0.00 0.00 1.82
2978 3039 6.842282 CCGGTCGTACGTCATTATTAATTTTG 59.158 38.462 16.05 0.00 0.00 2.44
2979 3040 7.393327 CGGTCGTACGTCATTATTAATTTTGT 58.607 34.615 16.05 0.00 0.00 2.83
2980 3041 8.530720 CGGTCGTACGTCATTATTAATTTTGTA 58.469 33.333 16.05 0.00 0.00 2.41
2981 3042 9.839589 GGTCGTACGTCATTATTAATTTTGTAG 57.160 33.333 16.05 0.00 0.00 2.74
2996 3057 9.561069 TTAATTTTGTAGAAAAGTCTCTCTGCT 57.439 29.630 0.95 0.00 34.53 4.24
2997 3058 8.457238 AATTTTGTAGAAAAGTCTCTCTGCTT 57.543 30.769 3.99 0.00 34.53 3.91
2998 3059 9.561069 AATTTTGTAGAAAAGTCTCTCTGCTTA 57.439 29.630 3.99 0.00 34.53 3.09
2999 3060 9.732130 ATTTTGTAGAAAAGTCTCTCTGCTTAT 57.268 29.630 3.99 0.00 34.53 1.73
3000 3061 9.561069 TTTTGTAGAAAAGTCTCTCTGCTTATT 57.439 29.630 0.00 0.00 35.12 1.40
3001 3062 8.539770 TTGTAGAAAAGTCTCTCTGCTTATTG 57.460 34.615 0.00 0.00 35.12 1.90
3002 3063 7.099764 TGTAGAAAAGTCTCTCTGCTTATTGG 58.900 38.462 0.00 0.00 35.12 3.16
3003 3064 6.365970 AGAAAAGTCTCTCTGCTTATTGGA 57.634 37.500 0.00 0.00 0.00 3.53
3004 3065 6.405538 AGAAAAGTCTCTCTGCTTATTGGAG 58.594 40.000 0.00 0.00 35.26 3.86
3005 3066 5.753721 AAAGTCTCTCTGCTTATTGGAGT 57.246 39.130 0.00 0.00 35.48 3.85
3006 3067 5.753721 AAGTCTCTCTGCTTATTGGAGTT 57.246 39.130 0.00 0.00 35.48 3.01
3007 3068 5.337578 AGTCTCTCTGCTTATTGGAGTTC 57.662 43.478 0.00 0.00 35.48 3.01
3008 3069 4.774726 AGTCTCTCTGCTTATTGGAGTTCA 59.225 41.667 0.00 0.00 35.48 3.18
3009 3070 5.247110 AGTCTCTCTGCTTATTGGAGTTCAA 59.753 40.000 0.00 0.00 40.01 2.69
3010 3071 5.350091 GTCTCTCTGCTTATTGGAGTTCAAC 59.650 44.000 0.00 0.00 38.31 3.18
3011 3072 4.579869 TCTCTGCTTATTGGAGTTCAACC 58.420 43.478 0.00 0.00 38.31 3.77
3012 3073 3.686016 TCTGCTTATTGGAGTTCAACCC 58.314 45.455 0.00 0.00 38.31 4.11
3013 3074 2.420022 CTGCTTATTGGAGTTCAACCCG 59.580 50.000 0.00 0.00 38.31 5.28
3014 3075 1.132453 GCTTATTGGAGTTCAACCCGC 59.868 52.381 0.00 0.00 38.31 6.13
3015 3076 2.432444 CTTATTGGAGTTCAACCCGCA 58.568 47.619 0.00 0.00 38.31 5.69
3016 3077 2.107950 TATTGGAGTTCAACCCGCAG 57.892 50.000 0.00 0.00 38.31 5.18
3017 3078 0.110486 ATTGGAGTTCAACCCGCAGT 59.890 50.000 0.00 0.00 38.31 4.40
3018 3079 0.534203 TTGGAGTTCAACCCGCAGTC 60.534 55.000 0.00 0.00 0.00 3.51
3019 3080 1.671379 GGAGTTCAACCCGCAGTCC 60.671 63.158 0.00 0.00 0.00 3.85
3020 3081 1.371558 GAGTTCAACCCGCAGTCCT 59.628 57.895 0.00 0.00 0.00 3.85
3021 3082 0.250338 GAGTTCAACCCGCAGTCCTT 60.250 55.000 0.00 0.00 0.00 3.36
3022 3083 0.182775 AGTTCAACCCGCAGTCCTTT 59.817 50.000 0.00 0.00 0.00 3.11
3023 3084 1.029681 GTTCAACCCGCAGTCCTTTT 58.970 50.000 0.00 0.00 0.00 2.27
3024 3085 1.407618 GTTCAACCCGCAGTCCTTTTT 59.592 47.619 0.00 0.00 0.00 1.94
3047 3108 8.657074 TTTTTGGGTGACTATATGAGATAACG 57.343 34.615 0.00 0.00 0.00 3.18
3048 3109 6.971726 TTGGGTGACTATATGAGATAACGT 57.028 37.500 0.00 0.00 0.00 3.99
3049 3110 6.971726 TGGGTGACTATATGAGATAACGTT 57.028 37.500 5.88 5.88 0.00 3.99
3050 3111 7.356089 TGGGTGACTATATGAGATAACGTTT 57.644 36.000 5.91 0.00 0.00 3.60
3051 3112 7.431249 TGGGTGACTATATGAGATAACGTTTC 58.569 38.462 5.91 4.21 0.00 2.78
3052 3113 6.581542 GGGTGACTATATGAGATAACGTTTCG 59.418 42.308 5.91 0.00 0.00 3.46
3053 3114 7.137426 GGTGACTATATGAGATAACGTTTCGT 58.863 38.462 5.91 1.90 43.97 3.85
3070 3131 3.701532 TCGTTTTTGCGAAATGTTCCT 57.298 38.095 0.00 0.00 37.99 3.36
3071 3132 3.367607 TCGTTTTTGCGAAATGTTCCTG 58.632 40.909 0.00 0.00 37.99 3.86
3072 3133 3.112580 CGTTTTTGCGAAATGTTCCTGT 58.887 40.909 0.00 0.00 0.00 4.00
3073 3134 4.035324 TCGTTTTTGCGAAATGTTCCTGTA 59.965 37.500 0.00 0.00 37.99 2.74
3074 3135 4.378616 CGTTTTTGCGAAATGTTCCTGTAG 59.621 41.667 0.00 0.00 0.00 2.74
3075 3136 5.278604 GTTTTTGCGAAATGTTCCTGTAGT 58.721 37.500 0.00 0.00 0.00 2.73
3076 3137 5.508200 TTTTGCGAAATGTTCCTGTAGTT 57.492 34.783 0.00 0.00 0.00 2.24
3077 3138 5.508200 TTTGCGAAATGTTCCTGTAGTTT 57.492 34.783 0.00 0.00 0.00 2.66
3078 3139 6.621316 TTTGCGAAATGTTCCTGTAGTTTA 57.379 33.333 0.00 0.00 0.00 2.01
3079 3140 5.856126 TGCGAAATGTTCCTGTAGTTTAG 57.144 39.130 0.00 0.00 0.00 1.85
3080 3141 5.302360 TGCGAAATGTTCCTGTAGTTTAGT 58.698 37.500 0.00 0.00 0.00 2.24
3081 3142 6.457355 TGCGAAATGTTCCTGTAGTTTAGTA 58.543 36.000 0.00 0.00 0.00 1.82
3082 3143 7.101054 TGCGAAATGTTCCTGTAGTTTAGTAT 58.899 34.615 0.00 0.00 0.00 2.12
3083 3144 7.064134 TGCGAAATGTTCCTGTAGTTTAGTATG 59.936 37.037 0.00 0.00 0.00 2.39
3084 3145 7.064253 GCGAAATGTTCCTGTAGTTTAGTATGT 59.936 37.037 0.00 0.00 0.00 2.29
3085 3146 8.932791 CGAAATGTTCCTGTAGTTTAGTATGTT 58.067 33.333 0.00 0.00 0.00 2.71
3087 3148 9.787435 AAATGTTCCTGTAGTTTAGTATGTTCA 57.213 29.630 0.00 0.00 0.00 3.18
3088 3149 9.787435 AATGTTCCTGTAGTTTAGTATGTTCAA 57.213 29.630 0.00 0.00 0.00 2.69
3089 3150 8.597662 TGTTCCTGTAGTTTAGTATGTTCAAC 57.402 34.615 0.00 0.00 0.00 3.18
3090 3151 7.658575 TGTTCCTGTAGTTTAGTATGTTCAACC 59.341 37.037 0.00 0.00 0.00 3.77
3091 3152 6.704310 TCCTGTAGTTTAGTATGTTCAACCC 58.296 40.000 0.00 0.00 0.00 4.11
3092 3153 5.579511 CCTGTAGTTTAGTATGTTCAACCCG 59.420 44.000 0.00 0.00 0.00 5.28
3093 3154 4.931002 TGTAGTTTAGTATGTTCAACCCGC 59.069 41.667 0.00 0.00 0.00 6.13
3094 3155 2.997986 AGTTTAGTATGTTCAACCCGCG 59.002 45.455 0.00 0.00 0.00 6.46
3095 3156 2.012937 TTAGTATGTTCAACCCGCGG 57.987 50.000 21.04 21.04 0.00 6.46
3096 3157 0.896923 TAGTATGTTCAACCCGCGGT 59.103 50.000 26.12 9.63 37.65 5.68
3097 3158 0.390735 AGTATGTTCAACCCGCGGTC 60.391 55.000 26.12 7.51 33.12 4.79
3098 3159 1.078988 TATGTTCAACCCGCGGTCC 60.079 57.895 26.12 5.21 33.12 4.46
3099 3160 1.546589 TATGTTCAACCCGCGGTCCT 61.547 55.000 26.12 4.48 33.12 3.85
3100 3161 2.281276 GTTCAACCCGCGGTCCTT 60.281 61.111 26.12 9.36 33.12 3.36
3101 3162 1.895231 GTTCAACCCGCGGTCCTTT 60.895 57.895 26.12 8.60 33.12 3.11
3102 3163 0.603439 GTTCAACCCGCGGTCCTTTA 60.603 55.000 26.12 1.27 33.12 1.85
3103 3164 0.320946 TTCAACCCGCGGTCCTTTAG 60.321 55.000 26.12 9.27 33.12 1.85
3104 3165 1.186917 TCAACCCGCGGTCCTTTAGA 61.187 55.000 26.12 8.90 33.12 2.10
3105 3166 1.017701 CAACCCGCGGTCCTTTAGAC 61.018 60.000 26.12 0.00 45.51 2.59
3117 3178 4.683832 GTCCTTTAGACATACATCACGCT 58.316 43.478 0.00 0.00 45.55 5.07
3118 3179 4.504461 GTCCTTTAGACATACATCACGCTG 59.496 45.833 0.00 0.00 45.55 5.18
3119 3180 3.246226 CCTTTAGACATACATCACGCTGC 59.754 47.826 0.00 0.00 0.00 5.25
3120 3181 3.518634 TTAGACATACATCACGCTGCA 57.481 42.857 0.00 0.00 0.00 4.41
3121 3182 1.931906 AGACATACATCACGCTGCAG 58.068 50.000 10.11 10.11 0.00 4.41
3122 3183 0.933097 GACATACATCACGCTGCAGG 59.067 55.000 17.12 8.27 0.00 4.85
3123 3184 0.536724 ACATACATCACGCTGCAGGA 59.463 50.000 17.12 4.56 0.00 3.86
3124 3185 1.139654 ACATACATCACGCTGCAGGAT 59.860 47.619 17.12 7.00 0.00 3.24
3125 3186 1.797046 CATACATCACGCTGCAGGATC 59.203 52.381 17.12 0.00 0.00 3.36
3126 3187 0.104855 TACATCACGCTGCAGGATCC 59.895 55.000 17.12 2.48 0.00 3.36
3127 3188 1.890979 CATCACGCTGCAGGATCCC 60.891 63.158 17.12 0.00 0.00 3.85
3128 3189 3.112205 ATCACGCTGCAGGATCCCC 62.112 63.158 17.12 0.00 0.00 4.81
3129 3190 3.790437 CACGCTGCAGGATCCCCT 61.790 66.667 17.12 0.00 45.74 4.79
3130 3191 3.011517 ACGCTGCAGGATCCCCTT 61.012 61.111 17.12 0.00 42.02 3.95
3131 3192 2.203126 CGCTGCAGGATCCCCTTC 60.203 66.667 17.12 0.00 42.02 3.46
3132 3193 2.739996 CGCTGCAGGATCCCCTTCT 61.740 63.158 17.12 0.00 42.02 2.85
3133 3194 1.611965 GCTGCAGGATCCCCTTCTT 59.388 57.895 17.12 0.00 42.02 2.52
3134 3195 0.750911 GCTGCAGGATCCCCTTCTTG 60.751 60.000 17.12 0.00 42.02 3.02
3135 3196 0.622665 CTGCAGGATCCCCTTCTTGT 59.377 55.000 8.55 0.00 42.02 3.16
3136 3197 1.005215 CTGCAGGATCCCCTTCTTGTT 59.995 52.381 8.55 0.00 42.02 2.83
3137 3198 1.004745 TGCAGGATCCCCTTCTTGTTC 59.995 52.381 8.55 0.00 42.02 3.18
3138 3199 1.683319 GCAGGATCCCCTTCTTGTTCC 60.683 57.143 8.55 0.00 42.02 3.62
3139 3200 1.064389 CAGGATCCCCTTCTTGTTCCC 60.064 57.143 8.55 0.00 42.02 3.97
3140 3201 0.259065 GGATCCCCTTCTTGTTCCCC 59.741 60.000 0.00 0.00 0.00 4.81
3141 3202 0.999712 GATCCCCTTCTTGTTCCCCA 59.000 55.000 0.00 0.00 0.00 4.96
3142 3203 0.704664 ATCCCCTTCTTGTTCCCCAC 59.295 55.000 0.00 0.00 0.00 4.61
3143 3204 1.303317 CCCCTTCTTGTTCCCCACG 60.303 63.158 0.00 0.00 0.00 4.94
3144 3205 1.454539 CCCTTCTTGTTCCCCACGT 59.545 57.895 0.00 0.00 0.00 4.49
3145 3206 0.688487 CCCTTCTTGTTCCCCACGTA 59.312 55.000 0.00 0.00 0.00 3.57
3146 3207 1.609841 CCCTTCTTGTTCCCCACGTAC 60.610 57.143 0.00 0.00 0.00 3.67
3147 3208 1.425412 CTTCTTGTTCCCCACGTACG 58.575 55.000 15.01 15.01 0.00 3.67
3148 3209 1.000060 CTTCTTGTTCCCCACGTACGA 60.000 52.381 24.41 0.00 0.00 3.43
3149 3210 1.039068 TCTTGTTCCCCACGTACGAA 58.961 50.000 24.41 1.65 0.00 3.85
3150 3211 1.142474 CTTGTTCCCCACGTACGAAC 58.858 55.000 24.41 15.49 37.10 3.95
3173 3234 3.737172 CCGCCGCCAACTTCCTTG 61.737 66.667 0.00 0.00 0.00 3.61
3174 3235 4.404654 CGCCGCCAACTTCCTTGC 62.405 66.667 0.00 0.00 0.00 4.01
3175 3236 2.985847 GCCGCCAACTTCCTTGCT 60.986 61.111 0.00 0.00 0.00 3.91
3176 3237 1.674322 GCCGCCAACTTCCTTGCTA 60.674 57.895 0.00 0.00 0.00 3.49
3177 3238 1.241315 GCCGCCAACTTCCTTGCTAA 61.241 55.000 0.00 0.00 0.00 3.09
3178 3239 0.804989 CCGCCAACTTCCTTGCTAAG 59.195 55.000 0.00 0.00 0.00 2.18
3179 3240 1.523758 CGCCAACTTCCTTGCTAAGT 58.476 50.000 0.00 0.00 38.82 2.24
3180 3241 1.464997 CGCCAACTTCCTTGCTAAGTC 59.535 52.381 0.00 0.00 36.17 3.01
3181 3242 1.813178 GCCAACTTCCTTGCTAAGTCC 59.187 52.381 0.00 0.00 36.17 3.85
3182 3243 2.076863 CCAACTTCCTTGCTAAGTCCG 58.923 52.381 0.00 0.00 36.17 4.79
3183 3244 1.464997 CAACTTCCTTGCTAAGTCCGC 59.535 52.381 0.00 0.00 36.17 5.54
3184 3245 0.389948 ACTTCCTTGCTAAGTCCGCG 60.390 55.000 0.00 0.00 31.56 6.46
3185 3246 0.108804 CTTCCTTGCTAAGTCCGCGA 60.109 55.000 8.23 0.00 0.00 5.87
3186 3247 0.389426 TTCCTTGCTAAGTCCGCGAC 60.389 55.000 8.23 3.80 0.00 5.19
3187 3248 1.810030 CCTTGCTAAGTCCGCGACC 60.810 63.158 8.23 0.00 32.18 4.79
3188 3249 2.126228 TTGCTAAGTCCGCGACCG 60.126 61.111 8.23 0.00 32.18 4.79
3189 3250 2.537792 CTTGCTAAGTCCGCGACCGA 62.538 60.000 8.23 0.00 36.29 4.69
3190 3251 2.144833 TTGCTAAGTCCGCGACCGAA 62.145 55.000 8.23 0.00 36.29 4.30
3191 3252 1.444895 GCTAAGTCCGCGACCGAAA 60.445 57.895 8.23 0.00 36.29 3.46
3192 3253 0.804933 GCTAAGTCCGCGACCGAAAT 60.805 55.000 8.23 0.00 36.29 2.17
3193 3254 1.197910 CTAAGTCCGCGACCGAAATC 58.802 55.000 8.23 0.00 36.29 2.17
3194 3255 0.179129 TAAGTCCGCGACCGAAATCC 60.179 55.000 8.23 0.00 36.29 3.01
3195 3256 2.125832 GTCCGCGACCGAAATCCA 60.126 61.111 8.23 0.00 36.29 3.41
3196 3257 2.125832 TCCGCGACCGAAATCCAC 60.126 61.111 8.23 0.00 36.29 4.02
3197 3258 3.550992 CCGCGACCGAAATCCACG 61.551 66.667 8.23 0.00 36.29 4.94
3198 3259 4.204891 CGCGACCGAAATCCACGC 62.205 66.667 0.00 0.00 44.64 5.34
3199 3260 3.861263 GCGACCGAAATCCACGCC 61.861 66.667 0.00 0.00 42.79 5.68
3200 3261 2.433491 CGACCGAAATCCACGCCA 60.433 61.111 0.00 0.00 0.00 5.69
3201 3262 2.736682 CGACCGAAATCCACGCCAC 61.737 63.158 0.00 0.00 0.00 5.01
3202 3263 2.736682 GACCGAAATCCACGCCACG 61.737 63.158 0.00 0.00 0.00 4.94
3203 3264 2.433491 CCGAAATCCACGCCACGA 60.433 61.111 0.00 0.00 0.00 4.35
3204 3265 2.452813 CCGAAATCCACGCCACGAG 61.453 63.158 0.00 0.00 0.00 4.18
3205 3266 2.785258 GAAATCCACGCCACGAGC 59.215 61.111 0.00 0.00 38.52 5.03
3206 3267 2.031919 AAATCCACGCCACGAGCA 59.968 55.556 0.00 0.00 44.04 4.26
3207 3268 1.970917 GAAATCCACGCCACGAGCAG 61.971 60.000 0.00 0.00 44.04 4.24
3208 3269 2.449031 AAATCCACGCCACGAGCAGA 62.449 55.000 0.00 0.00 44.04 4.26
3209 3270 2.842394 AATCCACGCCACGAGCAGAG 62.842 60.000 0.00 0.00 44.04 3.35
3211 3272 4.363990 CACGCCACGAGCAGAGGT 62.364 66.667 0.00 0.00 44.04 3.85
3212 3273 2.675423 ACGCCACGAGCAGAGGTA 60.675 61.111 0.00 0.00 44.04 3.08
3213 3274 2.052690 ACGCCACGAGCAGAGGTAT 61.053 57.895 0.00 0.00 44.04 2.73
3214 3275 1.299468 CGCCACGAGCAGAGGTATC 60.299 63.158 0.00 0.00 44.04 2.24
3215 3276 1.729470 CGCCACGAGCAGAGGTATCT 61.729 60.000 0.00 0.00 44.04 1.98
3230 3291 8.760103 CAGAGGTATCTGTTGAATCATAGATG 57.240 38.462 16.06 2.15 46.68 2.90
3231 3292 7.818446 CAGAGGTATCTGTTGAATCATAGATGG 59.182 40.741 16.06 1.86 46.68 3.51
3232 3293 7.013823 AGGTATCTGTTGAATCATAGATGGG 57.986 40.000 16.06 0.00 32.54 4.00
3233 3294 5.645497 GGTATCTGTTGAATCATAGATGGGC 59.355 44.000 16.06 9.06 32.54 5.36
3234 3295 5.579753 ATCTGTTGAATCATAGATGGGCT 57.420 39.130 8.95 0.00 0.00 5.19
3235 3296 5.378230 TCTGTTGAATCATAGATGGGCTT 57.622 39.130 0.00 0.00 0.00 4.35
3236 3297 5.759059 TCTGTTGAATCATAGATGGGCTTT 58.241 37.500 0.00 0.00 0.00 3.51
3237 3298 6.899089 TCTGTTGAATCATAGATGGGCTTTA 58.101 36.000 0.00 0.00 0.00 1.85
3238 3299 6.994496 TCTGTTGAATCATAGATGGGCTTTAG 59.006 38.462 0.00 0.00 0.00 1.85
3239 3300 6.064060 TGTTGAATCATAGATGGGCTTTAGG 58.936 40.000 0.00 0.00 0.00 2.69
3240 3301 4.655963 TGAATCATAGATGGGCTTTAGGC 58.344 43.478 0.00 0.00 40.90 3.93
3254 3315 4.874970 GCTTTAGGCCCATATGAACAATG 58.125 43.478 3.65 0.00 34.27 2.82
3255 3316 4.584325 GCTTTAGGCCCATATGAACAATGA 59.416 41.667 3.65 0.00 34.27 2.57
3256 3317 5.244626 GCTTTAGGCCCATATGAACAATGAT 59.755 40.000 3.65 0.00 34.27 2.45
3257 3318 6.239402 GCTTTAGGCCCATATGAACAATGATT 60.239 38.462 3.65 0.00 34.27 2.57
3258 3319 7.673641 TTTAGGCCCATATGAACAATGATTT 57.326 32.000 3.65 0.00 0.00 2.17
3259 3320 5.796424 AGGCCCATATGAACAATGATTTC 57.204 39.130 3.65 0.00 0.00 2.17
3260 3321 5.461327 AGGCCCATATGAACAATGATTTCT 58.539 37.500 3.65 0.00 0.00 2.52
3261 3322 5.303589 AGGCCCATATGAACAATGATTTCTG 59.696 40.000 3.65 0.00 0.00 3.02
3262 3323 5.510179 GGCCCATATGAACAATGATTTCTGG 60.510 44.000 3.65 0.00 0.00 3.86
3263 3324 5.069516 GCCCATATGAACAATGATTTCTGGT 59.930 40.000 3.65 0.00 0.00 4.00
3264 3325 6.407299 GCCCATATGAACAATGATTTCTGGTT 60.407 38.462 3.65 0.00 0.00 3.67
3265 3326 7.201902 GCCCATATGAACAATGATTTCTGGTTA 60.202 37.037 3.65 0.00 0.00 2.85
3266 3327 8.694540 CCCATATGAACAATGATTTCTGGTTAA 58.305 33.333 3.65 0.00 0.00 2.01
3271 3332 9.865321 ATGAACAATGATTTCTGGTTAATCTTG 57.135 29.630 0.00 0.00 34.00 3.02
3272 3333 9.076781 TGAACAATGATTTCTGGTTAATCTTGA 57.923 29.630 0.00 0.00 34.00 3.02
3273 3334 9.565213 GAACAATGATTTCTGGTTAATCTTGAG 57.435 33.333 0.00 0.00 34.00 3.02
3274 3335 8.059798 ACAATGATTTCTGGTTAATCTTGAGG 57.940 34.615 0.00 0.00 34.00 3.86
3275 3336 6.705863 ATGATTTCTGGTTAATCTTGAGGC 57.294 37.500 0.00 0.00 34.00 4.70
3276 3337 4.949856 TGATTTCTGGTTAATCTTGAGGCC 59.050 41.667 0.00 0.00 34.00 5.19
3277 3338 3.366052 TTCTGGTTAATCTTGAGGCCC 57.634 47.619 0.00 0.00 0.00 5.80
3278 3339 2.274542 TCTGGTTAATCTTGAGGCCCA 58.725 47.619 0.00 0.00 0.00 5.36
3279 3340 2.852449 TCTGGTTAATCTTGAGGCCCAT 59.148 45.455 0.00 0.00 0.00 4.00
3280 3341 2.954318 CTGGTTAATCTTGAGGCCCATG 59.046 50.000 0.00 0.00 0.00 3.66
3281 3342 2.311542 TGGTTAATCTTGAGGCCCATGT 59.688 45.455 0.00 0.00 0.00 3.21
3282 3343 3.525609 TGGTTAATCTTGAGGCCCATGTA 59.474 43.478 0.00 0.00 0.00 2.29
3283 3344 4.167892 TGGTTAATCTTGAGGCCCATGTAT 59.832 41.667 0.00 0.00 0.00 2.29
3284 3345 4.520492 GGTTAATCTTGAGGCCCATGTATG 59.480 45.833 0.00 0.00 0.00 2.39
3285 3346 5.376625 GTTAATCTTGAGGCCCATGTATGA 58.623 41.667 0.00 0.00 0.00 2.15
3286 3347 3.784511 ATCTTGAGGCCCATGTATGAG 57.215 47.619 0.00 0.00 0.00 2.90
3287 3348 2.763039 TCTTGAGGCCCATGTATGAGA 58.237 47.619 0.00 0.00 0.00 3.27
3288 3349 3.321039 TCTTGAGGCCCATGTATGAGAT 58.679 45.455 0.00 0.00 0.00 2.75
3289 3350 3.072038 TCTTGAGGCCCATGTATGAGATG 59.928 47.826 0.00 0.00 0.00 2.90
3290 3351 1.701292 TGAGGCCCATGTATGAGATGG 59.299 52.381 0.00 0.00 40.25 3.51
3291 3352 0.403271 AGGCCCATGTATGAGATGGC 59.597 55.000 0.00 0.00 39.36 4.40
3292 3353 0.111061 GGCCCATGTATGAGATGGCA 59.889 55.000 7.51 0.00 39.36 4.92
3293 3354 1.531423 GCCCATGTATGAGATGGCAG 58.469 55.000 0.00 0.00 39.36 4.85
3294 3355 1.885359 GCCCATGTATGAGATGGCAGG 60.885 57.143 0.00 0.00 39.36 4.85
3295 3356 1.422781 CCCATGTATGAGATGGCAGGT 59.577 52.381 0.00 0.00 39.36 4.00
3296 3357 2.501261 CCATGTATGAGATGGCAGGTG 58.499 52.381 0.00 0.00 34.21 4.00
3297 3358 2.501261 CATGTATGAGATGGCAGGTGG 58.499 52.381 0.00 0.00 0.00 4.61
3298 3359 1.583556 TGTATGAGATGGCAGGTGGT 58.416 50.000 0.00 0.00 0.00 4.16
3299 3360 1.210234 TGTATGAGATGGCAGGTGGTG 59.790 52.381 0.00 0.00 0.00 4.17
3300 3361 0.839277 TATGAGATGGCAGGTGGTGG 59.161 55.000 0.00 0.00 0.00 4.61
3301 3362 0.915872 ATGAGATGGCAGGTGGTGGA 60.916 55.000 0.00 0.00 0.00 4.02
3302 3363 1.133181 TGAGATGGCAGGTGGTGGAA 61.133 55.000 0.00 0.00 0.00 3.53
3303 3364 0.038166 GAGATGGCAGGTGGTGGAAA 59.962 55.000 0.00 0.00 0.00 3.13
3304 3365 0.038744 AGATGGCAGGTGGTGGAAAG 59.961 55.000 0.00 0.00 0.00 2.62
3305 3366 0.251341 GATGGCAGGTGGTGGAAAGT 60.251 55.000 0.00 0.00 0.00 2.66
3306 3367 0.188342 ATGGCAGGTGGTGGAAAGTT 59.812 50.000 0.00 0.00 0.00 2.66
3307 3368 0.032615 TGGCAGGTGGTGGAAAGTTT 60.033 50.000 0.00 0.00 0.00 2.66
3308 3369 1.215673 TGGCAGGTGGTGGAAAGTTTA 59.784 47.619 0.00 0.00 0.00 2.01
3309 3370 1.886542 GGCAGGTGGTGGAAAGTTTAG 59.113 52.381 0.00 0.00 0.00 1.85
3310 3371 2.583143 GCAGGTGGTGGAAAGTTTAGT 58.417 47.619 0.00 0.00 0.00 2.24
3311 3372 2.552743 GCAGGTGGTGGAAAGTTTAGTC 59.447 50.000 0.00 0.00 0.00 2.59
3312 3373 3.146847 CAGGTGGTGGAAAGTTTAGTCC 58.853 50.000 0.00 0.00 0.00 3.85
3313 3374 2.107726 AGGTGGTGGAAAGTTTAGTCCC 59.892 50.000 0.00 0.00 32.48 4.46
3314 3375 2.158579 GGTGGTGGAAAGTTTAGTCCCA 60.159 50.000 0.00 0.00 32.48 4.37
3315 3376 3.499745 GGTGGTGGAAAGTTTAGTCCCAT 60.500 47.826 0.00 0.00 32.48 4.00
3316 3377 3.756963 GTGGTGGAAAGTTTAGTCCCATC 59.243 47.826 0.00 0.00 32.48 3.51
3317 3378 3.655777 TGGTGGAAAGTTTAGTCCCATCT 59.344 43.478 6.04 0.00 32.48 2.90
3318 3379 4.105697 TGGTGGAAAGTTTAGTCCCATCTT 59.894 41.667 6.04 0.00 32.48 2.40
3319 3380 5.311121 TGGTGGAAAGTTTAGTCCCATCTTA 59.689 40.000 6.04 0.00 32.48 2.10
3320 3381 5.646793 GGTGGAAAGTTTAGTCCCATCTTAC 59.353 44.000 0.00 0.00 32.48 2.34
3321 3382 6.473758 GTGGAAAGTTTAGTCCCATCTTACT 58.526 40.000 0.00 0.00 32.48 2.24
3322 3383 7.310858 GGTGGAAAGTTTAGTCCCATCTTACTA 60.311 40.741 0.00 0.00 32.48 1.82
3323 3384 7.764901 GTGGAAAGTTTAGTCCCATCTTACTAG 59.235 40.741 0.00 0.00 32.48 2.57
3324 3385 7.456902 TGGAAAGTTTAGTCCCATCTTACTAGT 59.543 37.037 0.00 0.00 32.48 2.57
3325 3386 8.319881 GGAAAGTTTAGTCCCATCTTACTAGTT 58.680 37.037 0.00 0.00 30.27 2.24
3326 3387 9.152595 GAAAGTTTAGTCCCATCTTACTAGTTG 57.847 37.037 0.00 0.00 30.27 3.16
3327 3388 8.431910 AAGTTTAGTCCCATCTTACTAGTTGA 57.568 34.615 0.00 0.21 30.27 3.18
3328 3389 8.068892 AGTTTAGTCCCATCTTACTAGTTGAG 57.931 38.462 0.00 0.00 30.27 3.02
3329 3390 7.894364 AGTTTAGTCCCATCTTACTAGTTGAGA 59.106 37.037 0.00 5.89 30.27 3.27
3330 3391 8.529476 GTTTAGTCCCATCTTACTAGTTGAGAA 58.471 37.037 0.00 0.00 30.27 2.87
3331 3392 6.783708 AGTCCCATCTTACTAGTTGAGAAG 57.216 41.667 0.00 0.00 0.00 2.85
3332 3393 6.494952 AGTCCCATCTTACTAGTTGAGAAGA 58.505 40.000 0.00 4.35 32.73 2.87
3333 3394 6.605594 AGTCCCATCTTACTAGTTGAGAAGAG 59.394 42.308 0.00 0.00 31.76 2.85
3334 3395 6.378848 GTCCCATCTTACTAGTTGAGAAGAGT 59.621 42.308 0.00 0.00 31.76 3.24
3335 3396 6.954684 TCCCATCTTACTAGTTGAGAAGAGTT 59.045 38.462 0.00 0.00 31.76 3.01
3336 3397 7.038659 CCCATCTTACTAGTTGAGAAGAGTTG 58.961 42.308 0.00 0.64 31.76 3.16
3337 3398 7.093727 CCCATCTTACTAGTTGAGAAGAGTTGA 60.094 40.741 0.00 0.00 31.76 3.18
3338 3399 7.973388 CCATCTTACTAGTTGAGAAGAGTTGAG 59.027 40.741 0.00 0.00 31.76 3.02
3339 3400 8.735315 CATCTTACTAGTTGAGAAGAGTTGAGA 58.265 37.037 0.00 0.00 31.76 3.27
3340 3401 8.101654 TCTTACTAGTTGAGAAGAGTTGAGAC 57.898 38.462 0.00 0.00 0.00 3.36
3341 3402 7.940137 TCTTACTAGTTGAGAAGAGTTGAGACT 59.060 37.037 0.00 0.00 39.32 3.24
3363 3424 4.009370 CCTTTATAAGGGCTGCTCTACC 57.991 50.000 0.60 0.00 45.27 3.18
3364 3425 3.391296 CCTTTATAAGGGCTGCTCTACCA 59.609 47.826 0.60 0.00 45.27 3.25
3365 3426 4.381411 CTTTATAAGGGCTGCTCTACCAC 58.619 47.826 0.60 0.00 0.00 4.16
3366 3427 2.182516 ATAAGGGCTGCTCTACCACT 57.817 50.000 0.60 0.00 0.00 4.00
3367 3428 1.952621 TAAGGGCTGCTCTACCACTT 58.047 50.000 0.60 0.00 0.00 3.16
3368 3429 0.326264 AAGGGCTGCTCTACCACTTG 59.674 55.000 0.60 0.00 0.00 3.16
3369 3430 1.746991 GGGCTGCTCTACCACTTGC 60.747 63.158 0.00 0.00 0.00 4.01
3370 3431 1.746991 GGCTGCTCTACCACTTGCC 60.747 63.158 0.00 0.00 0.00 4.52
3371 3432 1.003355 GCTGCTCTACCACTTGCCA 60.003 57.895 0.00 0.00 0.00 4.92
3372 3433 0.393537 GCTGCTCTACCACTTGCCAT 60.394 55.000 0.00 0.00 0.00 4.40
3373 3434 1.952367 GCTGCTCTACCACTTGCCATT 60.952 52.381 0.00 0.00 0.00 3.16
3374 3435 1.741706 CTGCTCTACCACTTGCCATTG 59.258 52.381 0.00 0.00 0.00 2.82
3375 3436 1.098050 GCTCTACCACTTGCCATTGG 58.902 55.000 0.00 0.00 39.00 3.16
3376 3437 1.755179 CTCTACCACTTGCCATTGGG 58.245 55.000 4.53 0.00 37.18 4.12
3377 3438 1.281867 CTCTACCACTTGCCATTGGGA 59.718 52.381 4.53 0.00 37.18 4.37
3378 3439 1.281867 TCTACCACTTGCCATTGGGAG 59.718 52.381 4.53 0.06 44.47 4.30
3379 3440 0.323360 TACCACTTGCCATTGGGAGC 60.323 55.000 4.53 0.00 37.18 4.70
3380 3441 1.304713 CCACTTGCCATTGGGAGCT 60.305 57.895 4.53 0.00 35.59 4.09
3381 3442 0.901580 CCACTTGCCATTGGGAGCTT 60.902 55.000 4.53 0.00 35.59 3.74
3382 3443 0.245539 CACTTGCCATTGGGAGCTTG 59.754 55.000 4.53 0.00 35.59 4.01
3383 3444 0.901580 ACTTGCCATTGGGAGCTTGG 60.902 55.000 4.53 0.00 35.59 3.61
3384 3445 1.610086 TTGCCATTGGGAGCTTGGG 60.610 57.895 4.53 0.00 35.59 4.12
3385 3446 2.091640 TTGCCATTGGGAGCTTGGGA 62.092 55.000 4.53 0.00 35.59 4.37
3386 3447 1.305213 GCCATTGGGAGCTTGGGAA 60.305 57.895 4.53 0.00 35.59 3.97
3387 3448 1.325476 GCCATTGGGAGCTTGGGAAG 61.325 60.000 4.53 0.00 35.59 3.46
3388 3449 0.332632 CCATTGGGAGCTTGGGAAGA 59.667 55.000 0.00 0.00 35.59 2.87
3389 3450 1.684248 CCATTGGGAGCTTGGGAAGAG 60.684 57.143 0.00 0.00 35.59 2.85
3390 3451 0.627986 ATTGGGAGCTTGGGAAGAGG 59.372 55.000 0.00 0.00 0.00 3.69
3391 3452 0.475632 TTGGGAGCTTGGGAAGAGGA 60.476 55.000 0.00 0.00 0.00 3.71
3392 3453 0.911525 TGGGAGCTTGGGAAGAGGAG 60.912 60.000 0.00 0.00 0.00 3.69
3393 3454 0.912006 GGGAGCTTGGGAAGAGGAGT 60.912 60.000 0.00 0.00 0.00 3.85
3394 3455 0.251634 GGAGCTTGGGAAGAGGAGTG 59.748 60.000 0.00 0.00 0.00 3.51
3395 3456 0.251634 GAGCTTGGGAAGAGGAGTGG 59.748 60.000 0.00 0.00 0.00 4.00
3396 3457 0.474660 AGCTTGGGAAGAGGAGTGGT 60.475 55.000 0.00 0.00 0.00 4.16
3397 3458 1.203313 AGCTTGGGAAGAGGAGTGGTA 60.203 52.381 0.00 0.00 0.00 3.25
3398 3459 1.066071 GCTTGGGAAGAGGAGTGGTAC 60.066 57.143 0.00 0.00 0.00 3.34
3399 3460 2.257207 CTTGGGAAGAGGAGTGGTACA 58.743 52.381 0.00 0.00 0.00 2.90
3443 3504 3.435186 GCCTCGCCAAGCCTTGAC 61.435 66.667 5.89 0.00 0.00 3.18
3444 3505 3.121030 CCTCGCCAAGCCTTGACG 61.121 66.667 6.83 6.83 37.90 4.35
3445 3506 3.793144 CTCGCCAAGCCTTGACGC 61.793 66.667 8.37 2.01 36.44 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.796110 AAGCCCCTGAATATTCTTGCTA 57.204 40.909 16.24 0.00 0.00 3.49
11 12 3.181428 GCCCTAAGCCCCTGAATATTCTT 60.181 47.826 16.24 4.14 34.35 2.52
97 99 1.302431 CACCCGGTGCACAGATTGA 60.302 57.895 20.43 0.00 0.00 2.57
208 210 4.522789 AGTGCGGGTTGTTTTCAGAATAAT 59.477 37.500 0.00 0.00 0.00 1.28
318 327 5.808030 GTGGTCAAAGAAAAACCAAATTCGA 59.192 36.000 0.00 0.00 44.30 3.71
412 421 9.751542 AATGTCACGGTTACATTTGAAAATAAA 57.248 25.926 13.45 0.00 43.31 1.40
491 501 0.181587 ATCAACGTGTGGTGGGACAA 59.818 50.000 0.00 0.00 44.16 3.18
643 654 7.228507 TCCATATATTTTGAACCGAATGTCTGG 59.771 37.037 0.00 0.00 0.00 3.86
757 768 9.774413 ACTATAACATACTTACATAAGCAACCC 57.226 33.333 0.00 0.00 36.79 4.11
784 795 4.036852 GGACTAGATTTTGCCATAGGTTGC 59.963 45.833 0.00 0.00 0.00 4.17
808 819 3.319122 GGGGCATTAGATGAAAAAGCGAT 59.681 43.478 0.00 0.00 0.00 4.58
916 927 4.832823 AGAGGGAAGTGTATTTTTGGTTGG 59.167 41.667 0.00 0.00 0.00 3.77
920 931 5.048013 GGTTGAGAGGGAAGTGTATTTTTGG 60.048 44.000 0.00 0.00 0.00 3.28
925 936 3.256704 TGGGTTGAGAGGGAAGTGTATT 58.743 45.455 0.00 0.00 0.00 1.89
936 947 2.028112 TGTCGATCCTTTGGGTTGAGAG 60.028 50.000 0.00 0.00 0.00 3.20
941 952 2.504367 CTGTTGTCGATCCTTTGGGTT 58.496 47.619 0.00 0.00 0.00 4.11
1107 1126 1.153549 GTAGAGCCAGGCGGTGAAG 60.154 63.158 5.55 0.00 33.28 3.02
1581 1600 3.584868 GAACCCGTACCTGCGCACT 62.585 63.158 5.66 0.00 0.00 4.40
1597 1616 4.812476 CCGGACATCGCTGCGGAA 62.812 66.667 23.03 3.68 37.59 4.30
2334 2353 0.186386 AACCAAACCCGACCATCCAA 59.814 50.000 0.00 0.00 0.00 3.53
2459 2478 2.688507 ACGCAAATCAGTCTCGTTGAT 58.311 42.857 0.00 0.00 36.87 2.57
2460 2479 2.148916 ACGCAAATCAGTCTCGTTGA 57.851 45.000 0.00 0.00 0.00 3.18
2463 2482 1.148310 CCAACGCAAATCAGTCTCGT 58.852 50.000 0.00 0.00 34.63 4.18
2577 2596 9.616156 ACTACTAAATCTCTCAGTCGATTTCTA 57.384 33.333 7.62 1.46 39.69 2.10
2578 2597 8.514330 ACTACTAAATCTCTCAGTCGATTTCT 57.486 34.615 7.62 0.00 39.69 2.52
2579 2598 7.858879 GGACTACTAAATCTCTCAGTCGATTTC 59.141 40.741 7.62 0.00 39.69 2.17
2580 2599 7.201839 GGGACTACTAAATCTCTCAGTCGATTT 60.202 40.741 8.87 8.87 41.33 2.17
2581 2600 6.263617 GGGACTACTAAATCTCTCAGTCGATT 59.736 42.308 0.00 0.00 34.57 3.34
2582 2601 5.766174 GGGACTACTAAATCTCTCAGTCGAT 59.234 44.000 0.00 0.00 34.57 3.59
2583 2602 5.124645 GGGACTACTAAATCTCTCAGTCGA 58.875 45.833 0.00 0.00 34.57 4.20
2584 2603 4.024725 CGGGACTACTAAATCTCTCAGTCG 60.025 50.000 0.00 0.00 34.57 4.18
2585 2604 4.883006 ACGGGACTACTAAATCTCTCAGTC 59.117 45.833 0.00 0.00 33.31 3.51
2586 2605 4.857679 ACGGGACTACTAAATCTCTCAGT 58.142 43.478 0.00 0.00 0.00 3.41
2587 2606 5.838531 AACGGGACTACTAAATCTCTCAG 57.161 43.478 0.00 0.00 0.00 3.35
2588 2607 7.893124 AATAACGGGACTACTAAATCTCTCA 57.107 36.000 0.00 0.00 0.00 3.27
2666 2686 5.839606 TCAAATCCCATCATAAATCATGGCA 59.160 36.000 0.00 0.00 38.67 4.92
2689 2709 5.005779 CGTACATAGCTGGTCAATTCACTTC 59.994 44.000 0.00 0.00 0.00 3.01
2723 2743 7.983307 ACATTAGAAAAGTTGAGATGAGCATC 58.017 34.615 2.27 2.27 38.09 3.91
2727 2747 8.558973 AAGGACATTAGAAAAGTTGAGATGAG 57.441 34.615 0.00 0.00 0.00 2.90
2728 2748 8.924511 AAAGGACATTAGAAAAGTTGAGATGA 57.075 30.769 0.00 0.00 0.00 2.92
2744 2764 5.221521 GGAAAGCAAAGAGGAAAAGGACATT 60.222 40.000 0.00 0.00 0.00 2.71
2772 2792 8.617809 TCCGTAAATTACTTATTCCAATCTTGC 58.382 33.333 1.42 0.00 0.00 4.01
2807 2867 9.543783 ACCCGTAAATTATTTTACTTTTTGCAA 57.456 25.926 14.90 0.00 43.28 4.08
2817 2877 9.863650 TGGAATGGATACCCGTAAATTATTTTA 57.136 29.630 0.00 0.00 34.29 1.52
2818 2878 8.770010 TGGAATGGATACCCGTAAATTATTTT 57.230 30.769 0.00 0.00 34.29 1.82
2819 2879 8.635328 GTTGGAATGGATACCCGTAAATTATTT 58.365 33.333 0.00 0.00 34.29 1.40
2820 2880 7.040961 CGTTGGAATGGATACCCGTAAATTATT 60.041 37.037 0.00 0.00 34.29 1.40
2821 2881 6.428771 CGTTGGAATGGATACCCGTAAATTAT 59.571 38.462 0.00 0.00 34.29 1.28
2822 2882 5.759273 CGTTGGAATGGATACCCGTAAATTA 59.241 40.000 0.00 0.00 34.29 1.40
2823 2883 4.577283 CGTTGGAATGGATACCCGTAAATT 59.423 41.667 0.00 0.00 34.29 1.82
2824 2884 4.131596 CGTTGGAATGGATACCCGTAAAT 58.868 43.478 0.00 0.00 34.29 1.40
2825 2885 3.197333 TCGTTGGAATGGATACCCGTAAA 59.803 43.478 0.00 0.00 34.29 2.01
2826 2886 2.765135 TCGTTGGAATGGATACCCGTAA 59.235 45.455 0.00 0.00 34.29 3.18
2827 2887 2.363038 CTCGTTGGAATGGATACCCGTA 59.637 50.000 0.00 0.00 34.29 4.02
2828 2888 1.138266 CTCGTTGGAATGGATACCCGT 59.862 52.381 0.00 0.00 34.29 5.28
2829 2889 1.865865 CTCGTTGGAATGGATACCCG 58.134 55.000 0.00 0.00 34.29 5.28
2830 2890 1.594331 GCTCGTTGGAATGGATACCC 58.406 55.000 0.00 0.00 0.00 3.69
2831 2891 1.134220 TGGCTCGTTGGAATGGATACC 60.134 52.381 0.00 0.00 0.00 2.73
2832 2892 2.325583 TGGCTCGTTGGAATGGATAC 57.674 50.000 0.00 0.00 0.00 2.24
2833 2893 4.620567 CGATATGGCTCGTTGGAATGGATA 60.621 45.833 0.00 0.00 34.00 2.59
2834 2894 3.679389 GATATGGCTCGTTGGAATGGAT 58.321 45.455 0.00 0.00 0.00 3.41
2848 2908 1.000607 TCGGAACTAGCACGATATGGC 60.001 52.381 0.00 0.00 0.00 4.40
2850 2910 3.627732 ACTCGGAACTAGCACGATATG 57.372 47.619 4.76 0.00 35.93 1.78
2854 2914 0.524862 GGAACTCGGAACTAGCACGA 59.475 55.000 0.00 4.33 35.14 4.35
2855 2915 0.458025 GGGAACTCGGAACTAGCACG 60.458 60.000 0.00 0.00 0.00 5.34
2856 2916 0.108281 GGGGAACTCGGAACTAGCAC 60.108 60.000 0.00 0.00 0.00 4.40
2866 2926 1.471676 CGAGAATGGAAGGGGAACTCG 60.472 57.143 0.00 0.00 39.32 4.18
2880 2941 4.074970 AGATGAAAAGTTGCACCGAGAAT 58.925 39.130 0.00 0.00 0.00 2.40
2883 2944 3.558505 CAAGATGAAAAGTTGCACCGAG 58.441 45.455 0.00 0.00 0.00 4.63
2902 2963 9.445973 AAAATGGATCCTTTATTATTAGGGCAA 57.554 29.630 14.23 0.00 32.20 4.52
2903 2964 9.445973 AAAAATGGATCCTTTATTATTAGGGCA 57.554 29.630 14.23 0.00 32.20 5.36
2926 2987 7.771183 AGCAATCGATCCTTTATTAGCAAAAA 58.229 30.769 0.00 0.00 0.00 1.94
2927 2988 7.333528 AGCAATCGATCCTTTATTAGCAAAA 57.666 32.000 0.00 0.00 0.00 2.44
2928 2989 6.942532 AGCAATCGATCCTTTATTAGCAAA 57.057 33.333 0.00 0.00 0.00 3.68
2929 2990 6.017109 GGAAGCAATCGATCCTTTATTAGCAA 60.017 38.462 0.00 0.00 0.00 3.91
2930 2991 5.470098 GGAAGCAATCGATCCTTTATTAGCA 59.530 40.000 0.00 0.00 0.00 3.49
2931 2992 5.389935 CGGAAGCAATCGATCCTTTATTAGC 60.390 44.000 0.00 0.00 0.00 3.09
2932 2993 5.120830 CCGGAAGCAATCGATCCTTTATTAG 59.879 44.000 0.00 0.00 0.00 1.73
2933 2994 4.994852 CCGGAAGCAATCGATCCTTTATTA 59.005 41.667 0.00 0.00 0.00 0.98
2934 2995 3.815401 CCGGAAGCAATCGATCCTTTATT 59.185 43.478 0.00 0.00 0.00 1.40
2935 2996 3.181454 ACCGGAAGCAATCGATCCTTTAT 60.181 43.478 9.46 0.00 0.00 1.40
2936 2997 2.169769 ACCGGAAGCAATCGATCCTTTA 59.830 45.455 9.46 0.00 0.00 1.85
2937 2998 1.065418 ACCGGAAGCAATCGATCCTTT 60.065 47.619 9.46 0.00 0.00 3.11
2938 2999 0.541863 ACCGGAAGCAATCGATCCTT 59.458 50.000 9.46 10.11 0.00 3.36
2939 3000 0.105039 GACCGGAAGCAATCGATCCT 59.895 55.000 9.46 0.00 0.00 3.24
2940 3001 1.215655 CGACCGGAAGCAATCGATCC 61.216 60.000 9.46 0.00 36.70 3.36
2941 3002 0.527817 ACGACCGGAAGCAATCGATC 60.528 55.000 9.46 0.00 37.97 3.69
2942 3003 0.742505 TACGACCGGAAGCAATCGAT 59.257 50.000 9.46 0.00 37.97 3.59
2943 3004 0.179156 GTACGACCGGAAGCAATCGA 60.179 55.000 9.46 0.00 37.97 3.59
2944 3005 1.469126 CGTACGACCGGAAGCAATCG 61.469 60.000 10.44 8.68 40.39 3.34
2945 3006 0.457337 ACGTACGACCGGAAGCAATC 60.457 55.000 24.41 0.00 0.00 2.67
2946 3007 0.457337 GACGTACGACCGGAAGCAAT 60.457 55.000 24.41 0.00 0.00 3.56
2947 3008 1.081242 GACGTACGACCGGAAGCAA 60.081 57.895 24.41 0.00 0.00 3.91
2948 3009 1.588824 ATGACGTACGACCGGAAGCA 61.589 55.000 24.41 6.76 0.00 3.91
2949 3010 0.457337 AATGACGTACGACCGGAAGC 60.457 55.000 24.41 0.00 0.00 3.86
2950 3011 2.830772 TAATGACGTACGACCGGAAG 57.169 50.000 24.41 3.42 0.00 3.46
2951 3012 3.781079 AATAATGACGTACGACCGGAA 57.219 42.857 24.41 0.00 0.00 4.30
2952 3013 4.891627 TTAATAATGACGTACGACCGGA 57.108 40.909 24.41 4.28 0.00 5.14
2953 3014 6.515043 AAATTAATAATGACGTACGACCGG 57.485 37.500 24.41 0.00 0.00 5.28
2954 3015 7.393327 ACAAAATTAATAATGACGTACGACCG 58.607 34.615 24.41 0.00 0.00 4.79
2955 3016 9.839589 CTACAAAATTAATAATGACGTACGACC 57.160 33.333 24.41 13.50 0.00 4.79
2970 3031 9.561069 AGCAGAGAGACTTTTCTACAAAATTAA 57.439 29.630 0.00 0.00 30.91 1.40
2971 3032 9.561069 AAGCAGAGAGACTTTTCTACAAAATTA 57.439 29.630 0.00 0.00 30.91 1.40
2972 3033 8.457238 AAGCAGAGAGACTTTTCTACAAAATT 57.543 30.769 0.00 0.00 30.91 1.82
2973 3034 9.732130 ATAAGCAGAGAGACTTTTCTACAAAAT 57.268 29.630 0.00 0.00 30.91 1.82
2974 3035 9.561069 AATAAGCAGAGAGACTTTTCTACAAAA 57.439 29.630 0.00 0.00 29.47 2.44
2975 3036 8.993121 CAATAAGCAGAGAGACTTTTCTACAAA 58.007 33.333 0.00 0.00 29.47 2.83
2976 3037 7.604164 CCAATAAGCAGAGAGACTTTTCTACAA 59.396 37.037 0.00 0.00 29.47 2.41
2977 3038 7.039011 TCCAATAAGCAGAGAGACTTTTCTACA 60.039 37.037 0.00 0.00 29.47 2.74
2978 3039 7.324178 TCCAATAAGCAGAGAGACTTTTCTAC 58.676 38.462 0.00 0.00 29.47 2.59
2979 3040 7.179338 ACTCCAATAAGCAGAGAGACTTTTCTA 59.821 37.037 0.00 0.00 29.47 2.10
2980 3041 6.013812 ACTCCAATAAGCAGAGAGACTTTTCT 60.014 38.462 0.00 0.00 33.37 2.52
2981 3042 6.169800 ACTCCAATAAGCAGAGAGACTTTTC 58.830 40.000 0.00 0.00 0.00 2.29
2982 3043 6.120507 ACTCCAATAAGCAGAGAGACTTTT 57.879 37.500 0.00 0.00 0.00 2.27
2983 3044 5.753721 ACTCCAATAAGCAGAGAGACTTT 57.246 39.130 0.00 0.00 0.00 2.66
2984 3045 5.247110 TGAACTCCAATAAGCAGAGAGACTT 59.753 40.000 0.00 0.00 0.00 3.01
2985 3046 4.774726 TGAACTCCAATAAGCAGAGAGACT 59.225 41.667 0.00 0.00 0.00 3.24
2986 3047 5.078411 TGAACTCCAATAAGCAGAGAGAC 57.922 43.478 0.00 0.00 0.00 3.36
2987 3048 5.482908 GTTGAACTCCAATAAGCAGAGAGA 58.517 41.667 0.00 0.00 37.08 3.10
2988 3049 4.633565 GGTTGAACTCCAATAAGCAGAGAG 59.366 45.833 0.00 0.00 37.08 3.20
2989 3050 4.565652 GGGTTGAACTCCAATAAGCAGAGA 60.566 45.833 0.00 0.00 37.08 3.10
2990 3051 3.691609 GGGTTGAACTCCAATAAGCAGAG 59.308 47.826 0.00 0.00 37.08 3.35
2991 3052 3.686016 GGGTTGAACTCCAATAAGCAGA 58.314 45.455 0.00 0.00 37.08 4.26
2992 3053 2.420022 CGGGTTGAACTCCAATAAGCAG 59.580 50.000 0.00 0.00 37.08 4.24
2993 3054 2.432444 CGGGTTGAACTCCAATAAGCA 58.568 47.619 0.00 0.00 37.08 3.91
2994 3055 1.132453 GCGGGTTGAACTCCAATAAGC 59.868 52.381 0.00 0.00 37.08 3.09
2995 3056 2.420022 CTGCGGGTTGAACTCCAATAAG 59.580 50.000 0.00 0.00 37.08 1.73
2996 3057 2.224670 ACTGCGGGTTGAACTCCAATAA 60.225 45.455 0.00 0.00 37.08 1.40
2997 3058 1.349688 ACTGCGGGTTGAACTCCAATA 59.650 47.619 0.00 0.00 37.08 1.90
2998 3059 0.110486 ACTGCGGGTTGAACTCCAAT 59.890 50.000 0.00 0.00 37.08 3.16
2999 3060 0.534203 GACTGCGGGTTGAACTCCAA 60.534 55.000 0.00 0.00 0.00 3.53
3000 3061 1.070786 GACTGCGGGTTGAACTCCA 59.929 57.895 0.00 0.00 0.00 3.86
3001 3062 1.671379 GGACTGCGGGTTGAACTCC 60.671 63.158 0.00 0.00 0.00 3.85
3002 3063 0.250338 AAGGACTGCGGGTTGAACTC 60.250 55.000 0.00 0.00 0.00 3.01
3003 3064 0.182775 AAAGGACTGCGGGTTGAACT 59.817 50.000 0.00 0.00 0.00 3.01
3004 3065 1.029681 AAAAGGACTGCGGGTTGAAC 58.970 50.000 0.00 0.00 0.00 3.18
3005 3066 1.770294 AAAAAGGACTGCGGGTTGAA 58.230 45.000 0.00 0.00 0.00 2.69
3006 3067 3.505835 AAAAAGGACTGCGGGTTGA 57.494 47.368 0.00 0.00 0.00 3.18
3022 3083 8.262227 ACGTTATCTCATATAGTCACCCAAAAA 58.738 33.333 0.00 0.00 0.00 1.94
3023 3084 7.788026 ACGTTATCTCATATAGTCACCCAAAA 58.212 34.615 0.00 0.00 0.00 2.44
3024 3085 7.356089 ACGTTATCTCATATAGTCACCCAAA 57.644 36.000 0.00 0.00 0.00 3.28
3025 3086 6.971726 ACGTTATCTCATATAGTCACCCAA 57.028 37.500 0.00 0.00 0.00 4.12
3026 3087 6.971726 AACGTTATCTCATATAGTCACCCA 57.028 37.500 0.00 0.00 0.00 4.51
3027 3088 6.581542 CGAAACGTTATCTCATATAGTCACCC 59.418 42.308 0.00 0.00 0.00 4.61
3028 3089 7.137426 ACGAAACGTTATCTCATATAGTCACC 58.863 38.462 0.00 0.00 36.35 4.02
3050 3111 3.181495 ACAGGAACATTTCGCAAAAACGA 60.181 39.130 0.00 0.00 41.04 3.85
3051 3112 3.112580 ACAGGAACATTTCGCAAAAACG 58.887 40.909 0.00 0.00 0.00 3.60
3052 3113 5.278604 ACTACAGGAACATTTCGCAAAAAC 58.721 37.500 0.00 0.00 0.00 2.43
3053 3114 5.508200 ACTACAGGAACATTTCGCAAAAA 57.492 34.783 0.00 0.00 0.00 1.94
3054 3115 5.508200 AACTACAGGAACATTTCGCAAAA 57.492 34.783 0.00 0.00 0.00 2.44
3055 3116 5.508200 AAACTACAGGAACATTTCGCAAA 57.492 34.783 0.00 0.00 0.00 3.68
3056 3117 5.761234 ACTAAACTACAGGAACATTTCGCAA 59.239 36.000 0.00 0.00 0.00 4.85
3057 3118 5.302360 ACTAAACTACAGGAACATTTCGCA 58.698 37.500 0.00 0.00 0.00 5.10
3058 3119 5.857822 ACTAAACTACAGGAACATTTCGC 57.142 39.130 0.00 0.00 0.00 4.70
3059 3120 8.475331 ACATACTAAACTACAGGAACATTTCG 57.525 34.615 0.00 0.00 0.00 3.46
3061 3122 9.787435 TGAACATACTAAACTACAGGAACATTT 57.213 29.630 0.00 0.00 0.00 2.32
3062 3123 9.787435 TTGAACATACTAAACTACAGGAACATT 57.213 29.630 0.00 0.00 0.00 2.71
3063 3124 9.216117 GTTGAACATACTAAACTACAGGAACAT 57.784 33.333 0.00 0.00 0.00 2.71
3064 3125 7.658575 GGTTGAACATACTAAACTACAGGAACA 59.341 37.037 0.00 0.00 0.00 3.18
3065 3126 7.118825 GGGTTGAACATACTAAACTACAGGAAC 59.881 40.741 0.00 0.00 0.00 3.62
3066 3127 7.163441 GGGTTGAACATACTAAACTACAGGAA 58.837 38.462 0.00 0.00 0.00 3.36
3067 3128 6.572898 CGGGTTGAACATACTAAACTACAGGA 60.573 42.308 0.00 0.00 0.00 3.86
3068 3129 5.579511 CGGGTTGAACATACTAAACTACAGG 59.420 44.000 0.00 0.00 0.00 4.00
3069 3130 5.063060 GCGGGTTGAACATACTAAACTACAG 59.937 44.000 0.00 0.00 0.00 2.74
3070 3131 4.931002 GCGGGTTGAACATACTAAACTACA 59.069 41.667 0.00 0.00 0.00 2.74
3071 3132 4.032104 CGCGGGTTGAACATACTAAACTAC 59.968 45.833 0.00 0.00 0.00 2.73
3072 3133 4.175516 CGCGGGTTGAACATACTAAACTA 58.824 43.478 0.00 0.00 0.00 2.24
3073 3134 2.997986 CGCGGGTTGAACATACTAAACT 59.002 45.455 0.00 0.00 0.00 2.66
3074 3135 2.094734 CCGCGGGTTGAACATACTAAAC 59.905 50.000 20.10 0.00 0.00 2.01
3075 3136 2.289569 ACCGCGGGTTGAACATACTAAA 60.290 45.455 31.76 0.00 27.29 1.85
3076 3137 1.275856 ACCGCGGGTTGAACATACTAA 59.724 47.619 31.76 0.00 27.29 2.24
3077 3138 0.896923 ACCGCGGGTTGAACATACTA 59.103 50.000 31.76 0.00 27.29 1.82
3078 3139 0.390735 GACCGCGGGTTGAACATACT 60.391 55.000 31.76 2.41 35.25 2.12
3079 3140 1.363885 GGACCGCGGGTTGAACATAC 61.364 60.000 31.76 1.45 35.25 2.39
3080 3141 1.078988 GGACCGCGGGTTGAACATA 60.079 57.895 31.76 0.00 35.25 2.29
3081 3142 2.359478 GGACCGCGGGTTGAACAT 60.359 61.111 31.76 4.91 35.25 2.71
3082 3143 2.612095 AAAGGACCGCGGGTTGAACA 62.612 55.000 31.76 0.00 35.25 3.18
3083 3144 0.603439 TAAAGGACCGCGGGTTGAAC 60.603 55.000 31.76 12.28 35.25 3.18
3084 3145 0.320946 CTAAAGGACCGCGGGTTGAA 60.321 55.000 31.76 9.16 35.25 2.69
3085 3146 1.186917 TCTAAAGGACCGCGGGTTGA 61.187 55.000 31.76 11.95 35.25 3.18
3086 3147 1.017701 GTCTAAAGGACCGCGGGTTG 61.018 60.000 31.76 11.81 38.93 3.77
3087 3148 1.294459 GTCTAAAGGACCGCGGGTT 59.706 57.895 31.76 19.19 38.93 4.11
3088 3149 1.262640 ATGTCTAAAGGACCGCGGGT 61.263 55.000 31.76 15.52 43.89 5.28
3089 3150 0.748450 TATGTCTAAAGGACCGCGGG 59.252 55.000 31.76 11.88 43.89 6.13
3090 3151 1.135527 TGTATGTCTAAAGGACCGCGG 59.864 52.381 26.86 26.86 43.89 6.46
3091 3152 2.572191 TGTATGTCTAAAGGACCGCG 57.428 50.000 0.00 0.00 43.89 6.46
3092 3153 3.802685 GTGATGTATGTCTAAAGGACCGC 59.197 47.826 0.00 0.00 43.89 5.68
3093 3154 4.042398 CGTGATGTATGTCTAAAGGACCG 58.958 47.826 0.00 0.00 43.89 4.79
3094 3155 3.802685 GCGTGATGTATGTCTAAAGGACC 59.197 47.826 0.00 0.00 43.89 4.46
3095 3156 4.504461 CAGCGTGATGTATGTCTAAAGGAC 59.496 45.833 0.00 0.00 44.70 3.85
3096 3157 4.682787 CAGCGTGATGTATGTCTAAAGGA 58.317 43.478 0.00 0.00 0.00 3.36
3097 3158 3.246226 GCAGCGTGATGTATGTCTAAAGG 59.754 47.826 0.00 0.00 0.00 3.11
3098 3159 3.865164 TGCAGCGTGATGTATGTCTAAAG 59.135 43.478 0.00 0.00 0.00 1.85
3099 3160 3.855858 TGCAGCGTGATGTATGTCTAAA 58.144 40.909 0.00 0.00 0.00 1.85
3100 3161 3.447742 CTGCAGCGTGATGTATGTCTAA 58.552 45.455 0.00 0.00 0.00 2.10
3101 3162 2.223805 CCTGCAGCGTGATGTATGTCTA 60.224 50.000 8.66 0.00 0.00 2.59
3102 3163 1.472201 CCTGCAGCGTGATGTATGTCT 60.472 52.381 8.66 0.00 0.00 3.41
3103 3164 0.933097 CCTGCAGCGTGATGTATGTC 59.067 55.000 8.66 0.00 0.00 3.06
3104 3165 0.536724 TCCTGCAGCGTGATGTATGT 59.463 50.000 8.66 0.00 0.00 2.29
3105 3166 1.797046 GATCCTGCAGCGTGATGTATG 59.203 52.381 8.66 0.00 0.00 2.39
3106 3167 1.270518 GGATCCTGCAGCGTGATGTAT 60.271 52.381 8.66 0.00 0.00 2.29
3107 3168 0.104855 GGATCCTGCAGCGTGATGTA 59.895 55.000 8.66 0.00 0.00 2.29
3108 3169 1.153289 GGATCCTGCAGCGTGATGT 60.153 57.895 8.66 0.00 0.00 3.06
3109 3170 1.890979 GGGATCCTGCAGCGTGATG 60.891 63.158 12.58 0.00 0.00 3.07
3110 3171 2.507944 GGGATCCTGCAGCGTGAT 59.492 61.111 12.58 5.87 0.00 3.06
3111 3172 3.785859 GGGGATCCTGCAGCGTGA 61.786 66.667 12.58 0.01 0.00 4.35
3112 3173 3.335356 AAGGGGATCCTGCAGCGTG 62.335 63.158 12.58 0.00 44.07 5.34
3113 3174 3.011517 AAGGGGATCCTGCAGCGT 61.012 61.111 12.58 0.00 44.07 5.07
3114 3175 2.203126 GAAGGGGATCCTGCAGCG 60.203 66.667 12.58 1.56 44.07 5.18
3115 3176 0.750911 CAAGAAGGGGATCCTGCAGC 60.751 60.000 12.58 0.00 44.07 5.25
3116 3177 0.622665 ACAAGAAGGGGATCCTGCAG 59.377 55.000 12.58 6.78 44.07 4.41
3117 3178 1.004745 GAACAAGAAGGGGATCCTGCA 59.995 52.381 12.58 0.00 44.07 4.41
3118 3179 1.683319 GGAACAAGAAGGGGATCCTGC 60.683 57.143 12.58 0.00 44.07 4.85
3119 3180 1.064389 GGGAACAAGAAGGGGATCCTG 60.064 57.143 12.58 3.07 44.07 3.86
3121 3182 0.259065 GGGGAACAAGAAGGGGATCC 59.741 60.000 1.92 1.92 0.00 3.36
3122 3183 0.999712 TGGGGAACAAGAAGGGGATC 59.000 55.000 0.00 0.00 0.00 3.36
3123 3184 0.704664 GTGGGGAACAAGAAGGGGAT 59.295 55.000 0.00 0.00 0.00 3.85
3124 3185 1.774894 CGTGGGGAACAAGAAGGGGA 61.775 60.000 0.00 0.00 0.00 4.81
3125 3186 1.303317 CGTGGGGAACAAGAAGGGG 60.303 63.158 0.00 0.00 0.00 4.79
3126 3187 0.688487 TACGTGGGGAACAAGAAGGG 59.312 55.000 0.00 0.00 32.54 3.95
3127 3188 1.804601 GTACGTGGGGAACAAGAAGG 58.195 55.000 0.00 0.00 32.54 3.46
3128 3189 1.000060 TCGTACGTGGGGAACAAGAAG 60.000 52.381 16.05 0.00 32.54 2.85
3129 3190 1.039068 TCGTACGTGGGGAACAAGAA 58.961 50.000 16.05 0.00 32.54 2.52
3130 3191 1.039068 TTCGTACGTGGGGAACAAGA 58.961 50.000 16.05 0.00 32.54 3.02
3131 3192 1.142474 GTTCGTACGTGGGGAACAAG 58.858 55.000 16.05 0.00 39.76 3.16
3132 3193 0.597118 CGTTCGTACGTGGGGAACAA 60.597 55.000 16.05 0.00 42.72 2.83
3133 3194 1.007502 CGTTCGTACGTGGGGAACA 60.008 57.895 16.05 0.00 42.72 3.18
3134 3195 1.734117 CCGTTCGTACGTGGGGAAC 60.734 63.158 16.05 10.66 46.20 3.62
3135 3196 2.650196 CCGTTCGTACGTGGGGAA 59.350 61.111 16.05 0.00 46.20 3.97
3136 3197 3.372730 CCCGTTCGTACGTGGGGA 61.373 66.667 26.10 2.64 46.20 4.81
3156 3217 3.737172 CAAGGAAGTTGGCGGCGG 61.737 66.667 9.78 0.00 31.82 6.13
3157 3218 4.404654 GCAAGGAAGTTGGCGGCG 62.405 66.667 0.51 0.51 36.56 6.46
3158 3219 1.241315 TTAGCAAGGAAGTTGGCGGC 61.241 55.000 0.00 0.00 36.56 6.53
3159 3220 0.804989 CTTAGCAAGGAAGTTGGCGG 59.195 55.000 0.00 0.00 36.56 6.13
3160 3221 1.464997 GACTTAGCAAGGAAGTTGGCG 59.535 52.381 0.00 0.00 37.27 5.69
3161 3222 1.813178 GGACTTAGCAAGGAAGTTGGC 59.187 52.381 0.00 0.00 37.27 4.52
3162 3223 2.076863 CGGACTTAGCAAGGAAGTTGG 58.923 52.381 0.00 0.00 37.27 3.77
3163 3224 1.464997 GCGGACTTAGCAAGGAAGTTG 59.535 52.381 0.00 0.00 37.27 3.16
3164 3225 1.809684 GCGGACTTAGCAAGGAAGTT 58.190 50.000 0.00 0.00 37.27 2.66
3165 3226 0.389948 CGCGGACTTAGCAAGGAAGT 60.390 55.000 0.00 0.00 39.85 3.01
3166 3227 0.108804 TCGCGGACTTAGCAAGGAAG 60.109 55.000 6.13 0.00 34.19 3.46
3167 3228 0.389426 GTCGCGGACTTAGCAAGGAA 60.389 55.000 6.13 0.00 34.19 3.36
3168 3229 1.214589 GTCGCGGACTTAGCAAGGA 59.785 57.895 6.13 0.00 34.19 3.36
3169 3230 1.810030 GGTCGCGGACTTAGCAAGG 60.810 63.158 6.13 0.00 32.47 3.61
3170 3231 2.158959 CGGTCGCGGACTTAGCAAG 61.159 63.158 6.13 0.00 32.47 4.01
3171 3232 2.126228 CGGTCGCGGACTTAGCAA 60.126 61.111 6.13 0.00 32.47 3.91
3172 3233 2.144833 TTTCGGTCGCGGACTTAGCA 62.145 55.000 6.13 0.00 32.47 3.49
3173 3234 0.804933 ATTTCGGTCGCGGACTTAGC 60.805 55.000 6.13 0.00 32.47 3.09
3174 3235 1.197910 GATTTCGGTCGCGGACTTAG 58.802 55.000 6.13 0.36 32.47 2.18
3175 3236 0.179129 GGATTTCGGTCGCGGACTTA 60.179 55.000 6.13 0.00 32.47 2.24
3176 3237 1.447314 GGATTTCGGTCGCGGACTT 60.447 57.895 6.13 0.00 32.47 3.01
3177 3238 2.183555 GGATTTCGGTCGCGGACT 59.816 61.111 6.13 0.00 32.47 3.85
3178 3239 2.125832 TGGATTTCGGTCGCGGAC 60.126 61.111 6.13 2.87 0.00 4.79
3179 3240 2.125832 GTGGATTTCGGTCGCGGA 60.126 61.111 6.13 0.00 0.00 5.54
3180 3241 3.550992 CGTGGATTTCGGTCGCGG 61.551 66.667 6.13 0.00 0.00 6.46
3181 3242 4.204891 GCGTGGATTTCGGTCGCG 62.205 66.667 0.00 0.00 37.74 5.87
3182 3243 3.861263 GGCGTGGATTTCGGTCGC 61.861 66.667 0.00 0.00 44.95 5.19
3183 3244 2.433491 TGGCGTGGATTTCGGTCG 60.433 61.111 0.00 0.00 0.00 4.79
3184 3245 2.736682 CGTGGCGTGGATTTCGGTC 61.737 63.158 0.00 0.00 0.00 4.79
3185 3246 2.740826 CGTGGCGTGGATTTCGGT 60.741 61.111 0.00 0.00 0.00 4.69
3186 3247 2.433491 TCGTGGCGTGGATTTCGG 60.433 61.111 0.00 0.00 0.00 4.30
3187 3248 3.081133 CTCGTGGCGTGGATTTCG 58.919 61.111 0.00 0.00 0.00 3.46
3188 3249 1.970917 CTGCTCGTGGCGTGGATTTC 61.971 60.000 0.00 0.00 45.43 2.17
3189 3250 2.031919 TGCTCGTGGCGTGGATTT 59.968 55.556 0.00 0.00 45.43 2.17
3190 3251 2.434884 CTGCTCGTGGCGTGGATT 60.435 61.111 0.00 0.00 45.43 3.01
3191 3252 3.362399 CTCTGCTCGTGGCGTGGAT 62.362 63.158 0.00 0.00 45.43 3.41
3192 3253 4.056125 CTCTGCTCGTGGCGTGGA 62.056 66.667 0.00 0.00 45.43 4.02
3194 3255 2.284798 ATACCTCTGCTCGTGGCGTG 62.285 60.000 0.00 0.00 45.43 5.34
3195 3256 2.005960 GATACCTCTGCTCGTGGCGT 62.006 60.000 0.00 0.00 45.43 5.68
3196 3257 1.299468 GATACCTCTGCTCGTGGCG 60.299 63.158 0.00 0.00 45.43 5.69
3197 3258 0.249238 CAGATACCTCTGCTCGTGGC 60.249 60.000 0.00 0.00 42.36 5.01
3198 3259 3.955291 CAGATACCTCTGCTCGTGG 57.045 57.895 0.00 0.00 42.36 4.94
3206 3267 7.038445 CCCATCTATGATTCAACAGATACCTCT 60.038 40.741 11.66 0.00 0.00 3.69
3207 3268 7.102346 CCCATCTATGATTCAACAGATACCTC 58.898 42.308 11.66 0.00 0.00 3.85
3208 3269 6.521427 GCCCATCTATGATTCAACAGATACCT 60.521 42.308 11.66 0.00 0.00 3.08
3209 3270 5.645497 GCCCATCTATGATTCAACAGATACC 59.355 44.000 11.66 3.47 0.00 2.73
3210 3271 6.471146 AGCCCATCTATGATTCAACAGATAC 58.529 40.000 11.66 6.91 0.00 2.24
3211 3272 6.692849 AGCCCATCTATGATTCAACAGATA 57.307 37.500 11.66 0.00 0.00 1.98
3212 3273 5.579753 AGCCCATCTATGATTCAACAGAT 57.420 39.130 7.85 7.85 0.00 2.90
3213 3274 5.378230 AAGCCCATCTATGATTCAACAGA 57.622 39.130 4.39 4.39 0.00 3.41
3214 3275 6.206243 CCTAAAGCCCATCTATGATTCAACAG 59.794 42.308 0.00 0.00 0.00 3.16
3215 3276 6.064060 CCTAAAGCCCATCTATGATTCAACA 58.936 40.000 0.00 0.00 0.00 3.33
3216 3277 5.048434 GCCTAAAGCCCATCTATGATTCAAC 60.048 44.000 0.00 0.00 34.35 3.18
3217 3278 5.072741 GCCTAAAGCCCATCTATGATTCAA 58.927 41.667 0.00 0.00 34.35 2.69
3218 3279 4.655963 GCCTAAAGCCCATCTATGATTCA 58.344 43.478 0.00 0.00 34.35 2.57
3232 3293 4.584325 TCATTGTTCATATGGGCCTAAAGC 59.416 41.667 4.53 0.00 42.60 3.51
3233 3294 6.906157 ATCATTGTTCATATGGGCCTAAAG 57.094 37.500 4.53 0.00 0.00 1.85
3234 3295 7.564660 AGAAATCATTGTTCATATGGGCCTAAA 59.435 33.333 4.53 0.00 0.00 1.85
3235 3296 7.014518 CAGAAATCATTGTTCATATGGGCCTAA 59.985 37.037 4.53 0.00 0.00 2.69
3236 3297 6.491062 CAGAAATCATTGTTCATATGGGCCTA 59.509 38.462 4.53 0.00 0.00 3.93
3237 3298 5.303589 CAGAAATCATTGTTCATATGGGCCT 59.696 40.000 4.53 0.00 0.00 5.19
3238 3299 5.510179 CCAGAAATCATTGTTCATATGGGCC 60.510 44.000 2.13 0.00 0.00 5.80
3239 3300 5.069516 ACCAGAAATCATTGTTCATATGGGC 59.930 40.000 2.13 0.00 0.00 5.36
3240 3301 6.720112 ACCAGAAATCATTGTTCATATGGG 57.280 37.500 2.13 0.00 0.00 4.00
3245 3306 9.865321 CAAGATTAACCAGAAATCATTGTTCAT 57.135 29.630 0.00 0.00 36.09 2.57
3246 3307 9.076781 TCAAGATTAACCAGAAATCATTGTTCA 57.923 29.630 0.00 0.00 36.09 3.18
3247 3308 9.565213 CTCAAGATTAACCAGAAATCATTGTTC 57.435 33.333 0.00 0.00 36.09 3.18
3248 3309 8.526147 CCTCAAGATTAACCAGAAATCATTGTT 58.474 33.333 0.00 0.00 36.09 2.83
3249 3310 7.363268 GCCTCAAGATTAACCAGAAATCATTGT 60.363 37.037 0.00 0.00 36.09 2.71
3250 3311 6.976925 GCCTCAAGATTAACCAGAAATCATTG 59.023 38.462 0.00 0.00 36.09 2.82
3251 3312 6.097412 GGCCTCAAGATTAACCAGAAATCATT 59.903 38.462 0.00 0.00 36.09 2.57
3252 3313 5.595952 GGCCTCAAGATTAACCAGAAATCAT 59.404 40.000 0.00 0.00 36.09 2.45
3253 3314 4.949856 GGCCTCAAGATTAACCAGAAATCA 59.050 41.667 0.00 0.00 36.09 2.57
3254 3315 4.339530 GGGCCTCAAGATTAACCAGAAATC 59.660 45.833 0.84 0.00 34.23 2.17
3255 3316 4.264352 TGGGCCTCAAGATTAACCAGAAAT 60.264 41.667 4.53 0.00 0.00 2.17
3256 3317 3.075283 TGGGCCTCAAGATTAACCAGAAA 59.925 43.478 4.53 0.00 0.00 2.52
3257 3318 2.647299 TGGGCCTCAAGATTAACCAGAA 59.353 45.455 4.53 0.00 0.00 3.02
3258 3319 2.274542 TGGGCCTCAAGATTAACCAGA 58.725 47.619 4.53 0.00 0.00 3.86
3259 3320 2.806945 TGGGCCTCAAGATTAACCAG 57.193 50.000 4.53 0.00 0.00 4.00
3260 3321 2.311542 ACATGGGCCTCAAGATTAACCA 59.688 45.455 4.53 0.00 0.00 3.67
3261 3322 3.018423 ACATGGGCCTCAAGATTAACC 57.982 47.619 4.53 0.00 0.00 2.85
3262 3323 5.376625 TCATACATGGGCCTCAAGATTAAC 58.623 41.667 4.53 0.00 0.00 2.01
3263 3324 5.369404 TCTCATACATGGGCCTCAAGATTAA 59.631 40.000 4.53 0.00 0.00 1.40
3264 3325 4.907269 TCTCATACATGGGCCTCAAGATTA 59.093 41.667 4.53 0.00 0.00 1.75
3265 3326 3.718434 TCTCATACATGGGCCTCAAGATT 59.282 43.478 4.53 0.00 0.00 2.40
3266 3327 3.321039 TCTCATACATGGGCCTCAAGAT 58.679 45.455 4.53 0.00 0.00 2.40
3267 3328 2.763039 TCTCATACATGGGCCTCAAGA 58.237 47.619 4.53 0.00 0.00 3.02
3268 3329 3.409570 CATCTCATACATGGGCCTCAAG 58.590 50.000 4.53 0.00 0.00 3.02
3269 3330 2.107031 CCATCTCATACATGGGCCTCAA 59.893 50.000 4.53 0.00 37.71 3.02
3270 3331 1.701292 CCATCTCATACATGGGCCTCA 59.299 52.381 4.53 0.00 37.71 3.86
3271 3332 1.612726 GCCATCTCATACATGGGCCTC 60.613 57.143 4.53 0.00 41.23 4.70
3272 3333 0.403271 GCCATCTCATACATGGGCCT 59.597 55.000 4.53 0.00 41.23 5.19
3273 3334 0.111061 TGCCATCTCATACATGGGCC 59.889 55.000 0.00 0.00 41.23 5.80
3274 3335 1.531423 CTGCCATCTCATACATGGGC 58.469 55.000 0.00 0.00 41.23 5.36
3275 3336 1.422781 ACCTGCCATCTCATACATGGG 59.577 52.381 0.00 0.00 41.23 4.00
3276 3337 2.501261 CACCTGCCATCTCATACATGG 58.499 52.381 0.00 0.00 43.47 3.66
3277 3338 2.158711 ACCACCTGCCATCTCATACATG 60.159 50.000 0.00 0.00 0.00 3.21
3278 3339 2.130193 ACCACCTGCCATCTCATACAT 58.870 47.619 0.00 0.00 0.00 2.29
3279 3340 1.210234 CACCACCTGCCATCTCATACA 59.790 52.381 0.00 0.00 0.00 2.29
3280 3341 1.475751 CCACCACCTGCCATCTCATAC 60.476 57.143 0.00 0.00 0.00 2.39
3281 3342 0.839277 CCACCACCTGCCATCTCATA 59.161 55.000 0.00 0.00 0.00 2.15
3282 3343 0.915872 TCCACCACCTGCCATCTCAT 60.916 55.000 0.00 0.00 0.00 2.90
3283 3344 1.133181 TTCCACCACCTGCCATCTCA 61.133 55.000 0.00 0.00 0.00 3.27
3284 3345 0.038166 TTTCCACCACCTGCCATCTC 59.962 55.000 0.00 0.00 0.00 2.75
3285 3346 0.038744 CTTTCCACCACCTGCCATCT 59.961 55.000 0.00 0.00 0.00 2.90
3286 3347 0.251341 ACTTTCCACCACCTGCCATC 60.251 55.000 0.00 0.00 0.00 3.51
3287 3348 0.188342 AACTTTCCACCACCTGCCAT 59.812 50.000 0.00 0.00 0.00 4.40
3288 3349 0.032615 AAACTTTCCACCACCTGCCA 60.033 50.000 0.00 0.00 0.00 4.92
3289 3350 1.886542 CTAAACTTTCCACCACCTGCC 59.113 52.381 0.00 0.00 0.00 4.85
3290 3351 2.552743 GACTAAACTTTCCACCACCTGC 59.447 50.000 0.00 0.00 0.00 4.85
3291 3352 3.146847 GGACTAAACTTTCCACCACCTG 58.853 50.000 0.00 0.00 0.00 4.00
3292 3353 2.107726 GGGACTAAACTTTCCACCACCT 59.892 50.000 0.00 0.00 33.01 4.00
3293 3354 2.158579 TGGGACTAAACTTTCCACCACC 60.159 50.000 0.00 0.00 33.01 4.61
3294 3355 3.217681 TGGGACTAAACTTTCCACCAC 57.782 47.619 0.00 0.00 33.01 4.16
3295 3356 3.655777 AGATGGGACTAAACTTTCCACCA 59.344 43.478 0.00 0.00 33.01 4.17
3296 3357 4.302559 AGATGGGACTAAACTTTCCACC 57.697 45.455 0.00 0.00 33.01 4.61
3297 3358 6.473758 AGTAAGATGGGACTAAACTTTCCAC 58.526 40.000 0.00 0.00 33.01 4.02
3298 3359 6.697641 AGTAAGATGGGACTAAACTTTCCA 57.302 37.500 0.00 0.00 33.01 3.53
3299 3360 7.849160 ACTAGTAAGATGGGACTAAACTTTCC 58.151 38.462 0.00 0.00 0.00 3.13
3300 3361 9.152595 CAACTAGTAAGATGGGACTAAACTTTC 57.847 37.037 0.00 0.00 0.00 2.62
3301 3362 8.877195 TCAACTAGTAAGATGGGACTAAACTTT 58.123 33.333 0.00 0.00 0.00 2.66
3302 3363 8.431910 TCAACTAGTAAGATGGGACTAAACTT 57.568 34.615 0.00 0.00 0.00 2.66
3303 3364 7.894364 TCTCAACTAGTAAGATGGGACTAAACT 59.106 37.037 0.00 0.00 30.56 2.66
3304 3365 8.064336 TCTCAACTAGTAAGATGGGACTAAAC 57.936 38.462 0.00 0.00 30.56 2.01
3305 3366 8.660295 TTCTCAACTAGTAAGATGGGACTAAA 57.340 34.615 8.32 0.00 34.95 1.85
3306 3367 8.114102 TCTTCTCAACTAGTAAGATGGGACTAA 58.886 37.037 15.43 0.00 34.95 2.24
3307 3368 7.640313 TCTTCTCAACTAGTAAGATGGGACTA 58.360 38.462 15.43 0.00 34.95 2.59
3308 3369 6.494952 TCTTCTCAACTAGTAAGATGGGACT 58.505 40.000 15.43 0.00 34.95 3.85
3309 3370 6.378848 ACTCTTCTCAACTAGTAAGATGGGAC 59.621 42.308 19.67 0.00 34.95 4.46
3310 3371 6.494952 ACTCTTCTCAACTAGTAAGATGGGA 58.505 40.000 19.67 8.75 33.49 4.37
3311 3372 6.783708 ACTCTTCTCAACTAGTAAGATGGG 57.216 41.667 14.60 14.60 0.00 4.00
3312 3373 7.831753 TCAACTCTTCTCAACTAGTAAGATGG 58.168 38.462 15.43 9.75 0.00 3.51
3313 3374 8.735315 TCTCAACTCTTCTCAACTAGTAAGATG 58.265 37.037 6.33 9.44 0.00 2.90
3314 3375 8.736244 GTCTCAACTCTTCTCAACTAGTAAGAT 58.264 37.037 6.33 0.00 0.00 2.40
3315 3376 7.940137 AGTCTCAACTCTTCTCAACTAGTAAGA 59.060 37.037 0.00 0.40 0.00 2.10
3316 3377 8.106247 AGTCTCAACTCTTCTCAACTAGTAAG 57.894 38.462 0.00 0.00 0.00 2.34
3343 3404 4.101741 AGTGGTAGAGCAGCCCTTATAAAG 59.898 45.833 0.00 0.00 0.00 1.85
3344 3405 4.037927 AGTGGTAGAGCAGCCCTTATAAA 58.962 43.478 0.00 0.00 0.00 1.40
3345 3406 3.654273 AGTGGTAGAGCAGCCCTTATAA 58.346 45.455 0.00 0.00 0.00 0.98
3346 3407 3.330126 AGTGGTAGAGCAGCCCTTATA 57.670 47.619 0.00 0.00 0.00 0.98
3347 3408 2.171448 CAAGTGGTAGAGCAGCCCTTAT 59.829 50.000 0.00 0.00 0.00 1.73
3348 3409 1.555075 CAAGTGGTAGAGCAGCCCTTA 59.445 52.381 0.00 0.00 0.00 2.69
3349 3410 0.326264 CAAGTGGTAGAGCAGCCCTT 59.674 55.000 0.00 0.00 0.00 3.95
3350 3411 1.986413 CAAGTGGTAGAGCAGCCCT 59.014 57.895 0.00 0.00 0.00 5.19
3351 3412 1.746991 GCAAGTGGTAGAGCAGCCC 60.747 63.158 0.00 0.00 0.00 5.19
3352 3413 1.746991 GGCAAGTGGTAGAGCAGCC 60.747 63.158 0.00 0.00 0.00 4.85
3353 3414 0.393537 ATGGCAAGTGGTAGAGCAGC 60.394 55.000 0.00 0.00 0.00 5.25
3354 3415 1.741706 CAATGGCAAGTGGTAGAGCAG 59.258 52.381 0.00 0.00 0.00 4.24
3355 3416 1.614051 CCAATGGCAAGTGGTAGAGCA 60.614 52.381 11.45 0.00 36.76 4.26
3356 3417 1.098050 CCAATGGCAAGTGGTAGAGC 58.902 55.000 11.45 0.00 36.76 4.09
3357 3418 1.281867 TCCCAATGGCAAGTGGTAGAG 59.718 52.381 16.73 4.61 40.04 2.43
3358 3419 1.281867 CTCCCAATGGCAAGTGGTAGA 59.718 52.381 16.73 8.80 40.04 2.59
3359 3420 1.755179 CTCCCAATGGCAAGTGGTAG 58.245 55.000 16.73 8.79 40.04 3.18
3360 3421 0.323360 GCTCCCAATGGCAAGTGGTA 60.323 55.000 16.73 3.30 40.04 3.25
3361 3422 1.607467 GCTCCCAATGGCAAGTGGT 60.607 57.895 16.73 0.00 40.04 4.16
3362 3423 0.901580 AAGCTCCCAATGGCAAGTGG 60.902 55.000 12.46 12.46 41.38 4.00
3363 3424 0.245539 CAAGCTCCCAATGGCAAGTG 59.754 55.000 0.00 0.00 0.00 3.16
3364 3425 0.901580 CCAAGCTCCCAATGGCAAGT 60.902 55.000 0.00 0.00 0.00 3.16
3365 3426 1.610554 CCCAAGCTCCCAATGGCAAG 61.611 60.000 0.00 0.00 32.71 4.01
3366 3427 1.610086 CCCAAGCTCCCAATGGCAA 60.610 57.895 0.00 0.00 32.71 4.52
3367 3428 2.037687 CCCAAGCTCCCAATGGCA 59.962 61.111 0.00 0.00 32.71 4.92
3368 3429 1.305213 TTCCCAAGCTCCCAATGGC 60.305 57.895 0.00 0.00 32.71 4.40
3369 3430 0.332632 TCTTCCCAAGCTCCCAATGG 59.667 55.000 0.00 0.00 0.00 3.16
3370 3431 1.684248 CCTCTTCCCAAGCTCCCAATG 60.684 57.143 0.00 0.00 0.00 2.82
3371 3432 0.627986 CCTCTTCCCAAGCTCCCAAT 59.372 55.000 0.00 0.00 0.00 3.16
3372 3433 0.475632 TCCTCTTCCCAAGCTCCCAA 60.476 55.000 0.00 0.00 0.00 4.12
3373 3434 0.911525 CTCCTCTTCCCAAGCTCCCA 60.912 60.000 0.00 0.00 0.00 4.37
3374 3435 0.912006 ACTCCTCTTCCCAAGCTCCC 60.912 60.000 0.00 0.00 0.00 4.30
3375 3436 0.251634 CACTCCTCTTCCCAAGCTCC 59.748 60.000 0.00 0.00 0.00 4.70
3376 3437 0.251634 CCACTCCTCTTCCCAAGCTC 59.748 60.000 0.00 0.00 0.00 4.09
3377 3438 0.474660 ACCACTCCTCTTCCCAAGCT 60.475 55.000 0.00 0.00 0.00 3.74
3378 3439 1.066071 GTACCACTCCTCTTCCCAAGC 60.066 57.143 0.00 0.00 0.00 4.01
3379 3440 2.028020 GTGTACCACTCCTCTTCCCAAG 60.028 54.545 0.00 0.00 0.00 3.61
3380 3441 1.975680 GTGTACCACTCCTCTTCCCAA 59.024 52.381 0.00 0.00 0.00 4.12
3381 3442 1.640917 GTGTACCACTCCTCTTCCCA 58.359 55.000 0.00 0.00 0.00 4.37
3382 3443 0.531200 CGTGTACCACTCCTCTTCCC 59.469 60.000 0.00 0.00 31.34 3.97
3383 3444 0.108756 GCGTGTACCACTCCTCTTCC 60.109 60.000 0.00 0.00 31.34 3.46
3384 3445 0.456312 CGCGTGTACCACTCCTCTTC 60.456 60.000 0.00 0.00 31.34 2.87
3385 3446 1.585006 CGCGTGTACCACTCCTCTT 59.415 57.895 0.00 0.00 31.34 2.85
3386 3447 2.991076 GCGCGTGTACCACTCCTCT 61.991 63.158 8.43 0.00 31.34 3.69
3387 3448 2.506438 GCGCGTGTACCACTCCTC 60.506 66.667 8.43 0.00 31.34 3.71
3388 3449 4.415332 CGCGCGTGTACCACTCCT 62.415 66.667 24.19 0.00 31.34 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.