Multiple sequence alignment - TraesCS7B01G112900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G112900 chr7B 100.000 4656 0 0 1 4656 130505054 130500399 0.000000e+00 8599.0
1 TraesCS7B01G112900 chr7B 86.628 1219 64 34 742 1903 130120338 130121514 0.000000e+00 1256.0
2 TraesCS7B01G112900 chr7B 79.426 802 109 29 2915 3685 130124821 130125597 2.480000e-142 516.0
3 TraesCS7B01G112900 chr7B 98.120 266 4 1 481 745 84291662 84291397 3.280000e-126 462.0
4 TraesCS7B01G112900 chr7B 80.744 618 80 25 2266 2857 130121769 130122373 3.310000e-121 446.0
5 TraesCS7B01G112900 chr7B 94.891 274 14 0 481 754 608379611 608379338 3.330000e-116 429.0
6 TraesCS7B01G112900 chr7B 85.025 394 46 5 1026 1408 609704071 609704462 5.650000e-104 388.0
7 TraesCS7B01G112900 chr7B 81.971 477 43 29 25 463 130119858 130120329 9.520000e-97 364.0
8 TraesCS7B01G112900 chr7B 81.481 432 40 17 4 423 130119057 130119460 7.520000e-83 318.0
9 TraesCS7B01G112900 chr7B 81.349 252 27 13 1892 2134 130121546 130121786 2.210000e-43 187.0
10 TraesCS7B01G112900 chr7D 87.344 3690 243 90 752 4329 166204567 166200990 0.000000e+00 4021.0
11 TraesCS7B01G112900 chr7D 87.771 1153 76 28 742 1853 165944345 165945473 0.000000e+00 1288.0
12 TraesCS7B01G112900 chr7D 87.761 335 25 10 41 369 166205197 166204873 1.220000e-100 377.0
13 TraesCS7B01G112900 chr7D 84.359 390 35 11 2484 2857 165946295 165946674 4.430000e-95 359.0
14 TraesCS7B01G112900 chr7D 79.668 482 35 28 25 463 165943875 165944336 5.890000e-74 289.0
15 TraesCS7B01G112900 chr7D 80.353 397 54 17 3305 3687 165947481 165947867 3.550000e-71 279.0
16 TraesCS7B01G112900 chr7D 81.231 325 36 13 119 435 165943184 165943491 6.020000e-59 239.0
17 TraesCS7B01G112900 chr7D 82.553 235 27 9 1892 2120 165945743 165945969 1.320000e-45 195.0
18 TraesCS7B01G112900 chr7D 78.853 279 22 13 4318 4593 166165142 166164898 2.240000e-33 154.0
19 TraesCS7B01G112900 chr7D 89.344 122 9 4 361 481 166204691 166204573 2.900000e-32 150.0
20 TraesCS7B01G112900 chr7A 89.258 1415 94 24 752 2142 167736452 167735072 0.000000e+00 1718.0
21 TraesCS7B01G112900 chr7A 94.647 878 24 6 986 1851 167680493 167681359 0.000000e+00 1339.0
22 TraesCS7B01G112900 chr7A 87.482 695 64 17 2617 3299 167734063 167733380 0.000000e+00 780.0
23 TraesCS7B01G112900 chr7A 91.796 451 35 2 3242 3691 167733365 167732916 1.100000e-175 627.0
24 TraesCS7B01G112900 chr7A 85.179 587 55 12 3759 4329 167732887 167732317 1.450000e-159 573.0
25 TraesCS7B01G112900 chr7A 88.636 440 36 8 53 481 167736894 167736458 1.480000e-144 523.0
26 TraesCS7B01G112900 chr7A 96.935 261 8 0 482 742 9210710 9210450 5.530000e-119 438.0
27 TraesCS7B01G112900 chr7A 83.763 388 53 6 2471 2857 167682040 167682418 4.430000e-95 359.0
28 TraesCS7B01G112900 chr7A 81.798 445 46 20 4 435 167678990 167679412 1.600000e-89 340.0
29 TraesCS7B01G112900 chr7A 80.668 419 42 27 25 416 167679782 167680188 5.890000e-74 289.0
30 TraesCS7B01G112900 chr7A 86.842 228 27 3 4162 4386 699725026 699725253 7.730000e-63 252.0
31 TraesCS7B01G112900 chr7A 77.444 399 63 17 3301 3684 167682998 167683384 3.650000e-51 213.0
32 TraesCS7B01G112900 chr7A 82.778 180 18 6 2298 2468 167734958 167734783 1.040000e-31 148.0
33 TraesCS7B01G112900 chr7A 85.417 96 9 4 1922 2013 167681367 167681461 1.380000e-15 95.3
34 TraesCS7B01G112900 chr1A 98.467 261 4 0 482 742 575370959 575370699 1.180000e-125 460.0
35 TraesCS7B01G112900 chr5A 97.004 267 8 0 482 748 210736038 210736304 2.560000e-122 449.0
36 TraesCS7B01G112900 chr5A 96.255 267 10 0 482 748 9766136 9765870 5.530000e-119 438.0
37 TraesCS7B01G112900 chr2A 97.015 268 6 2 481 748 726752411 726752146 2.560000e-122 449.0
38 TraesCS7B01G112900 chr3A 96.629 267 9 0 482 748 58275074 58274808 1.190000e-120 444.0
39 TraesCS7B01G112900 chrUn 96.255 267 10 0 482 748 1525691 1525425 5.530000e-119 438.0
40 TraesCS7B01G112900 chr4B 81.002 479 55 19 4134 4607 622842433 622842880 9.590000e-92 348.0
41 TraesCS7B01G112900 chr4B 87.374 198 23 2 2661 2857 638663343 638663539 4.690000e-55 226.0
42 TraesCS7B01G112900 chr6D 83.954 349 48 5 996 1337 382798511 382798164 1.250000e-85 327.0
43 TraesCS7B01G112900 chr6A 78.897 526 74 25 1001 1491 524868425 524867902 5.810000e-84 322.0
44 TraesCS7B01G112900 chr6A 78.278 511 66 16 4151 4656 395426486 395426016 2.120000e-73 287.0
45 TraesCS7B01G112900 chr6B 83.191 351 50 7 995 1337 573161739 573161390 3.500000e-81 313.0
46 TraesCS7B01G112900 chr6B 86.869 198 24 2 2661 2857 462306287 462306483 2.180000e-53 220.0
47 TraesCS7B01G112900 chr3B 78.343 531 62 23 4081 4607 520453748 520453267 1.270000e-75 294.0
48 TraesCS7B01G112900 chr3B 86.364 198 26 1 2661 2857 602907361 602907558 1.010000e-51 215.0
49 TraesCS7B01G112900 chr5D 80.402 398 46 14 4081 4476 224877539 224877172 1.650000e-69 274.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G112900 chr7B 130500399 130505054 4655 True 8599.000000 8599 100.000000 1 4656 1 chr7B.!!$R2 4655
1 TraesCS7B01G112900 chr7B 130119057 130125597 6540 False 514.500000 1256 81.933167 4 3685 6 chr7B.!!$F2 3681
2 TraesCS7B01G112900 chr7D 166200990 166205197 4207 True 1516.000000 4021 88.149667 41 4329 3 chr7D.!!$R2 4288
3 TraesCS7B01G112900 chr7D 165943184 165947867 4683 False 441.500000 1288 82.655833 25 3687 6 chr7D.!!$F1 3662
4 TraesCS7B01G112900 chr7A 167732317 167736894 4577 True 728.166667 1718 87.521500 53 4329 6 chr7A.!!$R2 4276
5 TraesCS7B01G112900 chr7A 167678990 167683384 4394 False 439.216667 1339 83.956167 4 3684 6 chr7A.!!$F2 3680
6 TraesCS7B01G112900 chr6A 524867902 524868425 523 True 322.000000 322 78.897000 1001 1491 1 chr6A.!!$R2 490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
481 2352 0.251341 AGACGCCCAAGCAAGGAAAT 60.251 50.0 0.0 0.0 39.83 2.17 F
2001 4245 0.036875 AAAGCTCCGTGGGAAGGAAG 59.963 55.0 0.0 0.0 37.32 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2243 4842 0.188587 AGACTATCATGAGGGCGGGA 59.811 55.0 0.09 0.0 0.0 5.14 R
3871 10035 0.313672 TGTCGAAAAAGCATGCCCAC 59.686 50.0 15.66 0.0 0.0 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.104776 CGTTTTGCTAGCATGGTAAATGG 58.895 43.478 20.13 8.42 30.56 3.16
136 922 2.293399 GGTACCAAGTCAGTTTTGCAGG 59.707 50.000 7.15 0.00 0.00 4.85
212 1003 1.452108 GCAGCCGGAGCAAACCTAT 60.452 57.895 5.05 0.00 43.56 2.57
225 1016 4.440839 CAAACCTATCCTTTGCAACTCC 57.559 45.455 0.00 0.00 0.00 3.85
226 1017 2.403252 ACCTATCCTTTGCAACTCCG 57.597 50.000 0.00 0.00 0.00 4.63
235 1029 3.254657 CCTTTGCAACTCCGAAATAACCA 59.745 43.478 0.00 0.00 0.00 3.67
237 1031 4.497473 TTGCAACTCCGAAATAACCAAG 57.503 40.909 0.00 0.00 0.00 3.61
249 1043 5.334105 CGAAATAACCAAGGTGTTCAGACAG 60.334 44.000 0.00 0.00 36.20 3.51
250 1044 4.706842 ATAACCAAGGTGTTCAGACAGT 57.293 40.909 0.00 0.00 36.20 3.55
251 1045 5.818678 ATAACCAAGGTGTTCAGACAGTA 57.181 39.130 0.00 0.00 36.20 2.74
252 1046 3.753294 ACCAAGGTGTTCAGACAGTAG 57.247 47.619 0.00 0.00 36.20 2.57
253 1047 3.039011 ACCAAGGTGTTCAGACAGTAGT 58.961 45.455 0.00 0.00 36.20 2.73
254 1048 4.220724 ACCAAGGTGTTCAGACAGTAGTA 58.779 43.478 0.00 0.00 36.20 1.82
255 1049 4.652421 ACCAAGGTGTTCAGACAGTAGTAA 59.348 41.667 0.00 0.00 36.20 2.24
256 1050 5.221461 ACCAAGGTGTTCAGACAGTAGTAAG 60.221 44.000 0.00 0.00 36.20 2.34
257 1051 5.010719 CCAAGGTGTTCAGACAGTAGTAAGA 59.989 44.000 0.00 0.00 36.20 2.10
258 1052 6.295349 CCAAGGTGTTCAGACAGTAGTAAGAT 60.295 42.308 0.00 0.00 36.20 2.40
259 1053 6.518208 AGGTGTTCAGACAGTAGTAAGATC 57.482 41.667 0.00 0.00 36.20 2.75
260 1054 5.124138 AGGTGTTCAGACAGTAGTAAGATCG 59.876 44.000 0.00 0.00 36.20 3.69
261 1055 4.794246 GTGTTCAGACAGTAGTAAGATCGC 59.206 45.833 0.00 0.00 36.20 4.58
263 1057 5.048294 TGTTCAGACAGTAGTAAGATCGCAA 60.048 40.000 0.00 0.00 0.00 4.85
266 1081 7.329588 TCAGACAGTAGTAAGATCGCAATTA 57.670 36.000 0.00 0.00 0.00 1.40
268 1083 6.972901 CAGACAGTAGTAAGATCGCAATTACA 59.027 38.462 5.64 0.00 34.91 2.41
284 1099 5.276820 GCAATTACAAAGTTTTGCTTCGCTT 60.277 36.000 4.58 0.00 41.79 4.68
358 1997 5.576447 AAACGTGTTTTCATCCTTCACTT 57.424 34.783 0.00 0.00 0.00 3.16
417 2259 1.609783 CTCCCCGCTTCCATTTCCT 59.390 57.895 0.00 0.00 0.00 3.36
428 2270 3.703001 TCCATTTCCTCTTCCACAGTC 57.297 47.619 0.00 0.00 0.00 3.51
438 2290 2.171237 TCTTCCACAGTCCTATGCCATG 59.829 50.000 0.00 0.00 0.00 3.66
481 2352 0.251341 AGACGCCCAAGCAAGGAAAT 60.251 50.000 0.00 0.00 39.83 2.17
482 2353 1.004277 AGACGCCCAAGCAAGGAAATA 59.996 47.619 0.00 0.00 39.83 1.40
483 2354 1.132453 GACGCCCAAGCAAGGAAATAC 59.868 52.381 0.00 0.00 39.83 1.89
484 2355 1.271926 ACGCCCAAGCAAGGAAATACT 60.272 47.619 0.00 0.00 39.83 2.12
486 2357 2.159379 CGCCCAAGCAAGGAAATACTTC 60.159 50.000 0.00 0.00 39.83 3.01
487 2358 2.166459 GCCCAAGCAAGGAAATACTTCC 59.834 50.000 0.00 0.00 44.62 3.46
495 2366 2.616634 GGAAATACTTCCTCCGGTCC 57.383 55.000 0.00 0.00 46.80 4.46
496 2367 2.117051 GGAAATACTTCCTCCGGTCCT 58.883 52.381 0.00 0.00 46.80 3.85
497 2368 2.504585 GGAAATACTTCCTCCGGTCCTT 59.495 50.000 0.00 0.00 46.80 3.36
498 2369 3.054582 GGAAATACTTCCTCCGGTCCTTT 60.055 47.826 0.00 0.00 46.80 3.11
499 2370 4.567116 GGAAATACTTCCTCCGGTCCTTTT 60.567 45.833 0.00 0.00 46.80 2.27
500 2371 4.652679 AATACTTCCTCCGGTCCTTTTT 57.347 40.909 0.00 0.00 0.00 1.94
501 2372 5.767277 AATACTTCCTCCGGTCCTTTTTA 57.233 39.130 0.00 0.00 0.00 1.52
502 2373 3.413846 ACTTCCTCCGGTCCTTTTTAC 57.586 47.619 0.00 0.00 0.00 2.01
503 2374 2.977580 ACTTCCTCCGGTCCTTTTTACT 59.022 45.455 0.00 0.00 0.00 2.24
504 2375 3.007723 ACTTCCTCCGGTCCTTTTTACTC 59.992 47.826 0.00 0.00 0.00 2.59
505 2376 2.898662 TCCTCCGGTCCTTTTTACTCT 58.101 47.619 0.00 0.00 0.00 3.24
506 2377 2.565834 TCCTCCGGTCCTTTTTACTCTG 59.434 50.000 0.00 0.00 0.00 3.35
507 2378 2.347731 CTCCGGTCCTTTTTACTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
508 2379 1.695242 TCCGGTCCTTTTTACTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
509 2380 2.105134 TCCGGTCCTTTTTACTCTGCAA 59.895 45.455 0.00 0.00 0.00 4.08
510 2381 2.882137 CCGGTCCTTTTTACTCTGCAAA 59.118 45.455 0.00 0.00 0.00 3.68
511 2382 3.506067 CCGGTCCTTTTTACTCTGCAAAT 59.494 43.478 0.00 0.00 0.00 2.32
512 2383 4.022329 CCGGTCCTTTTTACTCTGCAAATT 60.022 41.667 0.00 0.00 0.00 1.82
513 2384 4.917415 CGGTCCTTTTTACTCTGCAAATTG 59.083 41.667 0.00 0.00 0.00 2.32
514 2385 5.278266 CGGTCCTTTTTACTCTGCAAATTGA 60.278 40.000 0.00 0.00 0.00 2.57
515 2386 6.512297 GGTCCTTTTTACTCTGCAAATTGAA 58.488 36.000 0.00 0.00 0.00 2.69
516 2387 7.154656 GGTCCTTTTTACTCTGCAAATTGAAT 58.845 34.615 0.00 0.00 0.00 2.57
517 2388 7.657354 GGTCCTTTTTACTCTGCAAATTGAATT 59.343 33.333 0.00 0.00 0.00 2.17
518 2389 9.045223 GTCCTTTTTACTCTGCAAATTGAATTT 57.955 29.630 0.00 0.00 0.00 1.82
529 2400 5.903764 CAAATTGAATTTGCCGAAAGTCA 57.096 34.783 16.62 0.00 42.76 3.41
533 2404 4.647424 TGAATTTGCCGAAAGTCAAACT 57.353 36.364 0.00 0.00 41.82 2.66
534 2405 5.004922 TGAATTTGCCGAAAGTCAAACTT 57.995 34.783 0.00 0.00 41.82 2.66
557 2428 9.930693 ACTTTGTTAAGTTTGACCAAATTTACA 57.069 25.926 9.11 8.40 41.85 2.41
640 2511 9.857656 AGATGAATCTAATGATATTGGTGTTGT 57.142 29.630 0.00 0.00 34.85 3.32
647 2518 9.898152 TCTAATGATATTGGTGTTGTTATGTGA 57.102 29.630 0.00 0.00 0.00 3.58
650 2521 9.806203 AATGATATTGGTGTTGTTATGTGAATG 57.194 29.630 0.00 0.00 0.00 2.67
651 2522 8.347004 TGATATTGGTGTTGTTATGTGAATGT 57.653 30.769 0.00 0.00 0.00 2.71
652 2523 8.458052 TGATATTGGTGTTGTTATGTGAATGTC 58.542 33.333 0.00 0.00 0.00 3.06
653 2524 6.899393 ATTGGTGTTGTTATGTGAATGTCT 57.101 33.333 0.00 0.00 0.00 3.41
654 2525 7.994425 ATTGGTGTTGTTATGTGAATGTCTA 57.006 32.000 0.00 0.00 0.00 2.59
655 2526 7.994425 TTGGTGTTGTTATGTGAATGTCTAT 57.006 32.000 0.00 0.00 0.00 1.98
656 2527 9.679661 ATTGGTGTTGTTATGTGAATGTCTATA 57.320 29.630 0.00 0.00 0.00 1.31
657 2528 9.508642 TTGGTGTTGTTATGTGAATGTCTATAA 57.491 29.630 0.00 0.00 0.00 0.98
658 2529 9.679661 TGGTGTTGTTATGTGAATGTCTATAAT 57.320 29.630 0.00 0.00 0.00 1.28
693 2564 5.972107 CTTGGTCAAAGTTGGATGAGATT 57.028 39.130 0.00 0.00 0.00 2.40
694 2565 5.706916 CTTGGTCAAAGTTGGATGAGATTG 58.293 41.667 0.00 0.00 0.00 2.67
695 2566 4.984295 TGGTCAAAGTTGGATGAGATTGA 58.016 39.130 0.00 0.00 0.00 2.57
696 2567 4.761739 TGGTCAAAGTTGGATGAGATTGAC 59.238 41.667 7.68 7.68 43.51 3.18
697 2568 5.006386 GGTCAAAGTTGGATGAGATTGACT 58.994 41.667 13.97 0.00 43.66 3.41
698 2569 5.474876 GGTCAAAGTTGGATGAGATTGACTT 59.525 40.000 13.97 0.00 43.66 3.01
699 2570 6.348868 GGTCAAAGTTGGATGAGATTGACTTC 60.349 42.308 13.97 0.00 43.66 3.01
700 2571 5.409520 TCAAAGTTGGATGAGATTGACTTCG 59.590 40.000 0.00 0.00 0.00 3.79
701 2572 3.866651 AGTTGGATGAGATTGACTTCGG 58.133 45.455 0.00 0.00 0.00 4.30
702 2573 3.515502 AGTTGGATGAGATTGACTTCGGA 59.484 43.478 0.00 0.00 0.00 4.55
703 2574 3.526931 TGGATGAGATTGACTTCGGAC 57.473 47.619 0.00 0.00 0.00 4.79
704 2575 2.831526 TGGATGAGATTGACTTCGGACA 59.168 45.455 0.00 0.00 0.00 4.02
705 2576 3.260632 TGGATGAGATTGACTTCGGACAA 59.739 43.478 0.00 0.00 34.59 3.18
706 2577 4.253685 GGATGAGATTGACTTCGGACAAA 58.746 43.478 0.00 0.00 33.90 2.83
707 2578 4.093556 GGATGAGATTGACTTCGGACAAAC 59.906 45.833 0.00 0.00 33.90 2.93
708 2579 3.399330 TGAGATTGACTTCGGACAAACC 58.601 45.455 0.00 0.00 33.90 3.27
709 2580 3.071023 TGAGATTGACTTCGGACAAACCT 59.929 43.478 0.00 0.00 33.90 3.50
710 2581 4.282449 TGAGATTGACTTCGGACAAACCTA 59.718 41.667 0.00 0.00 33.90 3.08
711 2582 5.221561 TGAGATTGACTTCGGACAAACCTAA 60.222 40.000 0.00 0.00 33.90 2.69
712 2583 5.805728 AGATTGACTTCGGACAAACCTAAT 58.194 37.500 0.00 0.00 33.90 1.73
713 2584 6.942976 AGATTGACTTCGGACAAACCTAATA 58.057 36.000 0.00 0.00 33.90 0.98
714 2585 7.565680 AGATTGACTTCGGACAAACCTAATAT 58.434 34.615 0.00 0.00 33.90 1.28
715 2586 6.978343 TTGACTTCGGACAAACCTAATATG 57.022 37.500 0.00 0.00 36.31 1.78
716 2587 4.873827 TGACTTCGGACAAACCTAATATGC 59.126 41.667 0.00 0.00 36.31 3.14
717 2588 4.839121 ACTTCGGACAAACCTAATATGCA 58.161 39.130 0.00 0.00 36.31 3.96
718 2589 4.876107 ACTTCGGACAAACCTAATATGCAG 59.124 41.667 0.00 0.00 36.31 4.41
719 2590 4.746535 TCGGACAAACCTAATATGCAGA 57.253 40.909 0.00 0.00 36.31 4.26
720 2591 4.693283 TCGGACAAACCTAATATGCAGAG 58.307 43.478 0.00 0.00 36.31 3.35
721 2592 4.161565 TCGGACAAACCTAATATGCAGAGT 59.838 41.667 0.00 0.00 36.31 3.24
722 2593 5.361571 TCGGACAAACCTAATATGCAGAGTA 59.638 40.000 0.00 0.00 36.31 2.59
723 2594 6.046593 CGGACAAACCTAATATGCAGAGTAA 58.953 40.000 0.00 0.00 36.31 2.24
724 2595 6.537301 CGGACAAACCTAATATGCAGAGTAAA 59.463 38.462 0.00 0.00 36.31 2.01
725 2596 7.065324 CGGACAAACCTAATATGCAGAGTAAAA 59.935 37.037 0.00 0.00 36.31 1.52
726 2597 8.736244 GGACAAACCTAATATGCAGAGTAAAAA 58.264 33.333 0.00 0.00 35.41 1.94
727 2598 9.774742 GACAAACCTAATATGCAGAGTAAAAAG 57.225 33.333 0.00 0.00 0.00 2.27
728 2599 8.739972 ACAAACCTAATATGCAGAGTAAAAAGG 58.260 33.333 0.00 0.00 0.00 3.11
729 2600 8.956426 CAAACCTAATATGCAGAGTAAAAAGGA 58.044 33.333 2.56 0.00 0.00 3.36
730 2601 8.507524 AACCTAATATGCAGAGTAAAAAGGAC 57.492 34.615 2.56 0.00 0.00 3.85
731 2602 7.054751 ACCTAATATGCAGAGTAAAAAGGACC 58.945 38.462 2.56 0.00 0.00 4.46
732 2603 6.202954 CCTAATATGCAGAGTAAAAAGGACCG 59.797 42.308 0.00 0.00 0.00 4.79
733 2604 2.178912 TGCAGAGTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
734 2605 1.695242 TGCAGAGTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
735 2606 2.289444 TGCAGAGTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
757 2628 8.679100 CGGAGGGAGTAATATAGAGAATAGTTG 58.321 40.741 0.00 0.00 0.00 3.16
792 2669 2.863739 CTCAATACTCGCGTGAACTCA 58.136 47.619 16.04 0.00 0.00 3.41
804 2685 2.031683 CGTGAACTCACCACAACCTTTC 59.968 50.000 4.30 0.00 43.66 2.62
826 2707 2.226170 ACTCCCAAATCTTCCCCTACCT 60.226 50.000 0.00 0.00 0.00 3.08
900 2805 3.736732 AACCACGCGAACCGAACCA 62.737 57.895 15.93 0.00 41.02 3.67
901 2806 3.708734 CCACGCGAACCGAACCAC 61.709 66.667 15.93 0.00 41.02 4.16
903 2808 4.974989 ACGCGAACCGAACCACCC 62.975 66.667 15.93 0.00 41.02 4.61
904 2809 4.973055 CGCGAACCGAACCACCCA 62.973 66.667 0.00 0.00 40.02 4.51
905 2810 3.351416 GCGAACCGAACCACCCAC 61.351 66.667 0.00 0.00 0.00 4.61
906 2811 3.039588 CGAACCGAACCACCCACG 61.040 66.667 0.00 0.00 0.00 4.94
907 2812 3.351416 GAACCGAACCACCCACGC 61.351 66.667 0.00 0.00 0.00 5.34
908 2813 4.941309 AACCGAACCACCCACGCC 62.941 66.667 0.00 0.00 0.00 5.68
955 2860 2.509561 GAGAGGAGGCGGCGAAAC 60.510 66.667 12.98 0.00 0.00 2.78
966 2871 1.920272 GCGGCGAAACACAAGAGAAAC 60.920 52.381 12.98 0.00 0.00 2.78
1473 3462 2.109181 GAGGCGGCCGCTAAGATT 59.891 61.111 45.23 25.16 41.60 2.40
1704 3705 1.951895 GCCAGGTTCATGATGCAGACA 60.952 52.381 0.00 0.00 0.00 3.41
1828 3837 4.768968 AGGTAATGCACTGCTTCTTTCAAT 59.231 37.500 1.98 0.00 0.00 2.57
1897 4092 3.575687 GCCATGCTATTAAGGCCTGAATT 59.424 43.478 21.04 5.42 41.25 2.17
2001 4245 0.036875 AAAGCTCCGTGGGAAGGAAG 59.963 55.000 0.00 0.00 37.32 3.46
2013 4278 5.289595 GTGGGAAGGAAGACAATGTTTTTC 58.710 41.667 0.00 0.00 0.00 2.29
2031 4296 8.147642 TGTTTTTCTTTTTCTTTCAAGCAACA 57.852 26.923 0.00 0.00 0.00 3.33
2052 4493 5.945310 ACAGTAGTATCTCATTACCCGGTA 58.055 41.667 0.00 0.00 0.00 4.02
2103 4546 9.840427 CCCAAAAGTATGTATTAGAACTGTTTG 57.160 33.333 0.00 0.00 0.00 2.93
2114 4559 9.744468 GTATTAGAACTGTTTGTTTTGACCAAT 57.256 29.630 0.00 0.00 39.30 3.16
2194 4791 5.287674 ACATGTTGTATGGATCTCTCTGG 57.712 43.478 0.00 0.00 0.00 3.86
2200 4799 5.604758 TGTATGGATCTCTCTGGTTTCAG 57.395 43.478 0.00 0.00 42.21 3.02
2209 4808 6.857437 TCTCTCTGGTTTCAGTCATGAATA 57.143 37.500 0.00 0.00 44.75 1.75
2210 4809 6.871844 TCTCTCTGGTTTCAGTCATGAATAG 58.128 40.000 0.00 0.00 44.75 1.73
2214 4813 7.604164 TCTCTGGTTTCAGTCATGAATAGAAAC 59.396 37.037 25.80 25.80 44.75 2.78
2256 4855 3.407967 GGGTTCCCGCCCTCATGA 61.408 66.667 0.00 0.00 45.22 3.07
2270 4869 6.934645 CCGCCCTCATGATAGTCTAAAATTTA 59.065 38.462 0.00 0.00 0.00 1.40
2444 5099 6.897413 ACAAGCCATGGGTTTATCTCTTTATT 59.103 34.615 26.36 0.00 33.16 1.40
2573 5323 3.935203 CCGATGCAGATGTGTCTTAAGTT 59.065 43.478 1.63 0.00 30.42 2.66
2583 5333 7.386299 CAGATGTGTCTTAAGTTTTGAGTAGCT 59.614 37.037 1.63 0.00 30.42 3.32
2584 5334 7.600752 AGATGTGTCTTAAGTTTTGAGTAGCTC 59.399 37.037 1.63 0.00 0.00 4.09
2587 5337 6.702282 GTGTCTTAAGTTTTGAGTAGCTCAGT 59.298 38.462 1.63 0.00 41.75 3.41
2611 5362 6.600882 AGCATGTTTGAGATTTTTCCTGAT 57.399 33.333 0.00 0.00 0.00 2.90
2622 5863 8.525316 TGAGATTTTTCCTGATACGTTACTACA 58.475 33.333 0.00 0.00 0.00 2.74
2642 5883 8.276252 ACTACATTAGTTATTTGTTGGCGATT 57.724 30.769 0.00 0.00 34.86 3.34
2714 5956 9.906660 CTTGTCATACTCCTACTTGAATATCTC 57.093 37.037 0.00 0.00 0.00 2.75
2751 5993 0.391661 TCACTTTCTGGCTGCGGATC 60.392 55.000 0.00 0.00 0.00 3.36
2785 6035 6.432472 CAGTAGCAGTCATAGATCTACCATGA 59.568 42.308 4.10 3.47 32.31 3.07
2842 6093 8.562892 AGTTGTCTAAATCTTCAATGTTGTCAG 58.437 33.333 0.00 0.00 0.00 3.51
2847 6098 5.368256 AATCTTCAATGTTGTCAGCAGAC 57.632 39.130 1.64 1.64 45.19 3.51
2861 6112 1.815003 AGCAGACATTTTAGCAGCCAC 59.185 47.619 0.00 0.00 0.00 5.01
2873 6124 2.045926 AGCCACTGCGATGTTCCC 60.046 61.111 0.00 0.00 44.33 3.97
2887 6188 1.209504 TGTTCCCTCTTTATCTGCGGG 59.790 52.381 0.00 0.00 36.21 6.13
2894 6195 0.652592 CTTTATCTGCGGGTTCAGCG 59.347 55.000 0.00 0.00 37.44 5.18
2910 6211 4.863707 CGTAGCAGCCATGGTGAT 57.136 55.556 14.67 11.58 37.78 3.06
3092 8780 2.322161 CAAGTTGCTTGATCCGCTTTG 58.678 47.619 2.98 4.70 43.42 2.77
3179 8879 6.183360 TGGTTTGATTTATTGTTGAGCACCTT 60.183 34.615 0.00 0.00 0.00 3.50
3190 8890 4.947388 TGTTGAGCACCTTAAAGTCAAACT 59.053 37.500 0.00 0.00 0.00 2.66
3198 8898 5.010012 CACCTTAAAGTCAAACTGGCAATCT 59.990 40.000 0.00 0.00 0.00 2.40
3199 8899 6.206634 CACCTTAAAGTCAAACTGGCAATCTA 59.793 38.462 0.00 0.00 0.00 1.98
3383 9503 3.752222 TCTCGCTCGAAGATAAGGGATAC 59.248 47.826 0.00 0.00 34.44 2.24
3473 9596 2.194212 GGCTCCCTCACGCGATCTA 61.194 63.158 15.93 0.00 0.00 1.98
3488 9611 2.482142 CGATCTAGGTTCCCTGCACTTC 60.482 54.545 0.00 0.00 34.61 3.01
3505 9628 2.893489 ACTTCCTGTTCAAATCTTGGCC 59.107 45.455 0.00 0.00 0.00 5.36
3747 9888 4.344968 TCTTCAGATTCAGAGTGTGGACAA 59.655 41.667 0.00 0.00 0.00 3.18
3775 9916 3.175109 GTGGAACGATAGGGTTAGTGG 57.825 52.381 0.00 0.00 43.77 4.00
3786 9927 2.714250 AGGGTTAGTGGTTTCATGGACA 59.286 45.455 0.00 0.00 0.00 4.02
3807 9948 1.180456 TAACTCCGCCTCGTGGAACA 61.180 55.000 7.92 0.00 41.98 3.18
3834 9997 1.905922 GCTGCAAGAAGTCGAGGTGC 61.906 60.000 0.00 0.00 34.07 5.01
3837 10000 0.037790 GCAAGAAGTCGAGGTGCTCT 60.038 55.000 0.00 0.00 32.43 4.09
3838 10001 1.707632 CAAGAAGTCGAGGTGCTCTG 58.292 55.000 0.00 0.00 0.00 3.35
3853 10016 0.752376 CTCTGGAGTACCTCGTCCCC 60.752 65.000 0.00 0.00 37.04 4.81
3871 10035 5.734718 TCCCCATGGGACAAGGTGATTTG 62.735 52.174 33.62 10.45 46.17 2.32
3892 10056 1.410517 TGGGCATGCTTTTTCGACAAA 59.589 42.857 18.92 0.00 0.00 2.83
3939 10103 4.307432 GCGTACAATATGCTGGTGAGTAT 58.693 43.478 0.00 0.00 37.70 2.12
3970 10134 2.362717 GCTCGGATACTAGGAAGCAAGT 59.637 50.000 0.00 0.00 0.00 3.16
4013 10177 2.524306 CAATACTTTGGAGGCAACCCA 58.476 47.619 0.00 0.00 35.45 4.51
4033 10197 0.323725 ACTCATTGGGGCATTCGCTT 60.324 50.000 0.00 0.00 38.60 4.68
4069 10233 1.421410 CGAAGTGCGTATGGGTGCTC 61.421 60.000 0.00 0.00 34.64 4.26
4086 10250 4.335874 GGTGCTCGTAGATGAAGACTAGAA 59.664 45.833 0.00 0.00 33.89 2.10
4090 10254 6.140110 GCTCGTAGATGAAGACTAGAACATC 58.860 44.000 0.00 6.00 39.24 3.06
4101 10265 2.233676 ACTAGAACATCGATGGTGTGCA 59.766 45.455 28.09 6.62 0.00 4.57
4103 10267 2.715046 AGAACATCGATGGTGTGCATT 58.285 42.857 28.09 12.15 0.00 3.56
4105 10269 1.825090 ACATCGATGGTGTGCATTGT 58.175 45.000 28.09 2.62 0.00 2.71
4112 10276 2.127270 GTGTGCATTGTCGTGCCG 60.127 61.111 0.00 0.00 44.43 5.69
4188 10352 9.953697 AATTTGCACAAACTTAAACGTCTATTA 57.046 25.926 0.00 0.00 32.51 0.98
4189 10353 9.953697 ATTTGCACAAACTTAAACGTCTATTAA 57.046 25.926 0.00 0.00 32.51 1.40
4199 10363 9.173939 ACTTAAACGTCTATTAATCGGTAATCG 57.826 33.333 0.00 0.00 40.90 3.34
4282 10446 9.170734 AGTAAATATAGCTAATCGGTATCGTCA 57.829 33.333 0.00 0.00 37.48 4.35
4299 10463 5.001237 TCGTCAAGACCGATAATAAGCAA 57.999 39.130 0.00 0.00 0.00 3.91
4345 10509 8.750298 ACATGTAACAGTCTACATATATAGGGC 58.250 37.037 0.00 0.00 39.89 5.19
4346 10510 8.749354 CATGTAACAGTCTACATATATAGGGCA 58.251 37.037 0.00 0.00 39.89 5.36
4347 10511 8.895141 TGTAACAGTCTACATATATAGGGCAT 57.105 34.615 0.00 0.00 0.00 4.40
4348 10512 8.967918 TGTAACAGTCTACATATATAGGGCATC 58.032 37.037 0.00 0.00 0.00 3.91
4349 10513 8.967918 GTAACAGTCTACATATATAGGGCATCA 58.032 37.037 0.00 0.00 0.00 3.07
4350 10514 8.435931 AACAGTCTACATATATAGGGCATCAA 57.564 34.615 0.00 0.00 0.00 2.57
4351 10515 7.841956 ACAGTCTACATATATAGGGCATCAAC 58.158 38.462 0.00 0.00 0.00 3.18
4352 10516 7.454694 ACAGTCTACATATATAGGGCATCAACA 59.545 37.037 0.00 0.00 0.00 3.33
4353 10517 7.978414 CAGTCTACATATATAGGGCATCAACAG 59.022 40.741 0.00 0.00 0.00 3.16
4354 10518 7.895962 AGTCTACATATATAGGGCATCAACAGA 59.104 37.037 0.00 0.00 0.00 3.41
4355 10519 8.531982 GTCTACATATATAGGGCATCAACAGAA 58.468 37.037 0.00 0.00 0.00 3.02
4356 10520 9.271921 TCTACATATATAGGGCATCAACAGAAT 57.728 33.333 0.00 0.00 0.00 2.40
4357 10521 9.539825 CTACATATATAGGGCATCAACAGAATC 57.460 37.037 0.00 0.00 0.00 2.52
4358 10522 8.155620 ACATATATAGGGCATCAACAGAATCT 57.844 34.615 0.00 0.00 0.00 2.40
4359 10523 8.609483 ACATATATAGGGCATCAACAGAATCTT 58.391 33.333 0.00 0.00 0.00 2.40
4360 10524 9.107177 CATATATAGGGCATCAACAGAATCTTC 57.893 37.037 0.00 0.00 0.00 2.87
4361 10525 5.643421 ATAGGGCATCAACAGAATCTTCT 57.357 39.130 0.00 0.00 38.25 2.85
4362 10526 3.883669 AGGGCATCAACAGAATCTTCTC 58.116 45.455 0.00 0.00 34.74 2.87
4363 10527 3.522750 AGGGCATCAACAGAATCTTCTCT 59.477 43.478 0.00 0.00 34.74 3.10
4364 10528 3.626670 GGGCATCAACAGAATCTTCTCTG 59.373 47.826 0.00 0.00 46.94 3.35
4375 10539 7.670009 CAGAATCTTCTCTGTTTGTGAATCT 57.330 36.000 0.00 0.00 38.43 2.40
4376 10540 8.097078 CAGAATCTTCTCTGTTTGTGAATCTT 57.903 34.615 0.00 0.00 38.43 2.40
4377 10541 8.016229 CAGAATCTTCTCTGTTTGTGAATCTTG 58.984 37.037 0.00 0.00 38.43 3.02
4378 10542 7.935755 AGAATCTTCTCTGTTTGTGAATCTTGA 59.064 33.333 0.00 0.00 29.94 3.02
4379 10543 8.455903 AATCTTCTCTGTTTGTGAATCTTGAA 57.544 30.769 0.00 0.00 0.00 2.69
4380 10544 8.632906 ATCTTCTCTGTTTGTGAATCTTGAAT 57.367 30.769 0.00 0.00 0.00 2.57
4381 10545 8.455903 TCTTCTCTGTTTGTGAATCTTGAATT 57.544 30.769 0.00 0.00 0.00 2.17
4382 10546 8.906867 TCTTCTCTGTTTGTGAATCTTGAATTT 58.093 29.630 0.00 0.00 0.00 1.82
4383 10547 8.861033 TTCTCTGTTTGTGAATCTTGAATTTG 57.139 30.769 0.00 0.00 0.00 2.32
4384 10548 7.428020 TCTCTGTTTGTGAATCTTGAATTTGG 58.572 34.615 0.00 0.00 0.00 3.28
4385 10549 7.068593 TCTCTGTTTGTGAATCTTGAATTTGGT 59.931 33.333 0.00 0.00 0.00 3.67
4386 10550 6.979817 TCTGTTTGTGAATCTTGAATTTGGTG 59.020 34.615 0.00 0.00 0.00 4.17
4387 10551 6.638610 TGTTTGTGAATCTTGAATTTGGTGT 58.361 32.000 0.00 0.00 0.00 4.16
4388 10552 6.534436 TGTTTGTGAATCTTGAATTTGGTGTG 59.466 34.615 0.00 0.00 0.00 3.82
4389 10553 5.850557 TGTGAATCTTGAATTTGGTGTGT 57.149 34.783 0.00 0.00 0.00 3.72
4390 10554 5.590145 TGTGAATCTTGAATTTGGTGTGTG 58.410 37.500 0.00 0.00 0.00 3.82
4391 10555 5.126869 TGTGAATCTTGAATTTGGTGTGTGT 59.873 36.000 0.00 0.00 0.00 3.72
4392 10556 5.459762 GTGAATCTTGAATTTGGTGTGTGTG 59.540 40.000 0.00 0.00 0.00 3.82
4393 10557 5.359292 TGAATCTTGAATTTGGTGTGTGTGA 59.641 36.000 0.00 0.00 0.00 3.58
4394 10558 5.850557 ATCTTGAATTTGGTGTGTGTGAA 57.149 34.783 0.00 0.00 0.00 3.18
4395 10559 5.850557 TCTTGAATTTGGTGTGTGTGAAT 57.149 34.783 0.00 0.00 0.00 2.57
4396 10560 5.830912 TCTTGAATTTGGTGTGTGTGAATC 58.169 37.500 0.00 0.00 0.00 2.52
4397 10561 5.593909 TCTTGAATTTGGTGTGTGTGAATCT 59.406 36.000 0.00 0.00 0.00 2.40
4398 10562 5.850557 TGAATTTGGTGTGTGTGAATCTT 57.149 34.783 0.00 0.00 0.00 2.40
4399 10563 5.590145 TGAATTTGGTGTGTGTGAATCTTG 58.410 37.500 0.00 0.00 0.00 3.02
4400 10564 5.359292 TGAATTTGGTGTGTGTGAATCTTGA 59.641 36.000 0.00 0.00 0.00 3.02
4401 10565 5.850557 ATTTGGTGTGTGTGAATCTTGAA 57.149 34.783 0.00 0.00 0.00 2.69
4402 10566 5.850557 TTTGGTGTGTGTGAATCTTGAAT 57.149 34.783 0.00 0.00 0.00 2.57
4403 10567 5.850557 TTGGTGTGTGTGAATCTTGAATT 57.149 34.783 0.00 0.00 0.00 2.17
4404 10568 5.850557 TGGTGTGTGTGAATCTTGAATTT 57.149 34.783 0.00 0.00 0.00 1.82
4405 10569 5.590145 TGGTGTGTGTGAATCTTGAATTTG 58.410 37.500 0.00 0.00 0.00 2.32
4406 10570 4.984161 GGTGTGTGTGAATCTTGAATTTGG 59.016 41.667 0.00 0.00 0.00 3.28
4407 10571 5.451798 GGTGTGTGTGAATCTTGAATTTGGT 60.452 40.000 0.00 0.00 0.00 3.67
4408 10572 6.042143 GTGTGTGTGAATCTTGAATTTGGTT 58.958 36.000 0.00 0.00 0.00 3.67
4409 10573 7.199766 GTGTGTGTGAATCTTGAATTTGGTTA 58.800 34.615 0.00 0.00 0.00 2.85
4410 10574 7.379529 GTGTGTGTGAATCTTGAATTTGGTTAG 59.620 37.037 0.00 0.00 0.00 2.34
4411 10575 7.068103 TGTGTGTGAATCTTGAATTTGGTTAGT 59.932 33.333 0.00 0.00 0.00 2.24
4412 10576 7.920682 GTGTGTGAATCTTGAATTTGGTTAGTT 59.079 33.333 0.00 0.00 0.00 2.24
4413 10577 7.920151 TGTGTGAATCTTGAATTTGGTTAGTTG 59.080 33.333 0.00 0.00 0.00 3.16
4414 10578 6.922957 TGTGAATCTTGAATTTGGTTAGTTGC 59.077 34.615 0.00 0.00 0.00 4.17
4415 10579 7.147976 GTGAATCTTGAATTTGGTTAGTTGCT 58.852 34.615 0.00 0.00 0.00 3.91
4416 10580 7.653311 GTGAATCTTGAATTTGGTTAGTTGCTT 59.347 33.333 0.00 0.00 0.00 3.91
4417 10581 7.867403 TGAATCTTGAATTTGGTTAGTTGCTTC 59.133 33.333 0.00 0.00 0.00 3.86
4418 10582 6.959639 TCTTGAATTTGGTTAGTTGCTTCT 57.040 33.333 0.00 0.00 0.00 2.85
4419 10583 6.738114 TCTTGAATTTGGTTAGTTGCTTCTG 58.262 36.000 0.00 0.00 0.00 3.02
4420 10584 6.545666 TCTTGAATTTGGTTAGTTGCTTCTGA 59.454 34.615 0.00 0.00 0.00 3.27
4421 10585 6.317789 TGAATTTGGTTAGTTGCTTCTGAG 57.682 37.500 0.00 0.00 0.00 3.35
4422 10586 5.827797 TGAATTTGGTTAGTTGCTTCTGAGT 59.172 36.000 0.00 0.00 0.00 3.41
4423 10587 5.695851 ATTTGGTTAGTTGCTTCTGAGTG 57.304 39.130 0.00 0.00 0.00 3.51
4424 10588 2.494059 TGGTTAGTTGCTTCTGAGTGC 58.506 47.619 0.00 0.00 0.00 4.40
4425 10589 2.104792 TGGTTAGTTGCTTCTGAGTGCT 59.895 45.455 6.36 0.00 0.00 4.40
4426 10590 2.739379 GGTTAGTTGCTTCTGAGTGCTC 59.261 50.000 6.36 0.00 0.00 4.26
4427 10591 3.393800 GTTAGTTGCTTCTGAGTGCTCA 58.606 45.455 1.69 1.69 38.06 4.26
4428 10592 2.627515 AGTTGCTTCTGAGTGCTCAA 57.372 45.000 3.36 0.00 39.39 3.02
4429 10593 2.923121 AGTTGCTTCTGAGTGCTCAAA 58.077 42.857 3.36 1.30 39.39 2.69
4430 10594 3.282021 AGTTGCTTCTGAGTGCTCAAAA 58.718 40.909 3.36 0.00 39.39 2.44
4431 10595 3.065925 AGTTGCTTCTGAGTGCTCAAAAC 59.934 43.478 3.36 4.13 39.39 2.43
4432 10596 1.949525 TGCTTCTGAGTGCTCAAAACC 59.050 47.619 3.36 0.00 39.39 3.27
4433 10597 2.225467 GCTTCTGAGTGCTCAAAACCT 58.775 47.619 3.36 0.00 39.39 3.50
4434 10598 2.225255 GCTTCTGAGTGCTCAAAACCTC 59.775 50.000 3.36 0.00 39.39 3.85
4435 10599 2.550830 TCTGAGTGCTCAAAACCTCC 57.449 50.000 3.36 0.00 39.39 4.30
4436 10600 1.072331 TCTGAGTGCTCAAAACCTCCC 59.928 52.381 3.36 0.00 39.39 4.30
4437 10601 0.843309 TGAGTGCTCAAAACCTCCCA 59.157 50.000 0.00 0.00 36.53 4.37
4438 10602 1.425066 TGAGTGCTCAAAACCTCCCAT 59.575 47.619 0.00 0.00 36.53 4.00
4439 10603 1.815003 GAGTGCTCAAAACCTCCCATG 59.185 52.381 0.00 0.00 0.00 3.66
4440 10604 0.890683 GTGCTCAAAACCTCCCATGG 59.109 55.000 4.14 4.14 0.00 3.66
4441 10605 0.482446 TGCTCAAAACCTCCCATGGT 59.518 50.000 11.73 0.00 43.11 3.55
4448 10612 2.087248 ACCTCCCATGGTTTCCTGG 58.913 57.895 11.73 5.76 36.89 4.45
4449 10613 1.380380 CCTCCCATGGTTTCCTGGC 60.380 63.158 11.73 0.00 0.00 4.85
4450 10614 1.693640 CTCCCATGGTTTCCTGGCT 59.306 57.895 11.73 0.00 0.00 4.75
4451 10615 0.918983 CTCCCATGGTTTCCTGGCTA 59.081 55.000 11.73 0.00 0.00 3.93
4452 10616 0.623723 TCCCATGGTTTCCTGGCTAC 59.376 55.000 11.73 0.00 0.00 3.58
4453 10617 0.331278 CCCATGGTTTCCTGGCTACA 59.669 55.000 11.73 0.00 0.00 2.74
4454 10618 1.683011 CCCATGGTTTCCTGGCTACAG 60.683 57.143 11.73 0.00 44.51 2.74
4455 10619 1.098050 CATGGTTTCCTGGCTACAGC 58.902 55.000 0.00 0.00 43.53 4.40
4456 10620 0.698238 ATGGTTTCCTGGCTACAGCA 59.302 50.000 3.24 0.00 43.53 4.41
4457 10621 0.476338 TGGTTTCCTGGCTACAGCAA 59.524 50.000 3.24 0.00 43.53 3.91
4458 10622 0.881796 GGTTTCCTGGCTACAGCAAC 59.118 55.000 3.24 0.00 43.53 4.17
4459 10623 0.881796 GTTTCCTGGCTACAGCAACC 59.118 55.000 3.24 0.00 43.53 3.77
4460 10624 0.771127 TTTCCTGGCTACAGCAACCT 59.229 50.000 3.24 0.00 43.53 3.50
4461 10625 1.651737 TTCCTGGCTACAGCAACCTA 58.348 50.000 3.24 0.00 43.53 3.08
4462 10626 1.879575 TCCTGGCTACAGCAACCTAT 58.120 50.000 3.24 0.00 43.53 2.57
4463 10627 2.196595 TCCTGGCTACAGCAACCTATT 58.803 47.619 3.24 0.00 43.53 1.73
4464 10628 2.576191 TCCTGGCTACAGCAACCTATTT 59.424 45.455 3.24 0.00 43.53 1.40
4465 10629 3.778075 TCCTGGCTACAGCAACCTATTTA 59.222 43.478 3.24 0.00 43.53 1.40
4466 10630 4.412199 TCCTGGCTACAGCAACCTATTTAT 59.588 41.667 3.24 0.00 43.53 1.40
4467 10631 4.516698 CCTGGCTACAGCAACCTATTTATG 59.483 45.833 3.24 0.00 43.53 1.90
4468 10632 3.882888 TGGCTACAGCAACCTATTTATGC 59.117 43.478 3.24 0.00 44.36 3.14
4469 10633 3.253432 GGCTACAGCAACCTATTTATGCC 59.747 47.826 3.24 0.00 44.36 4.40
4470 10634 3.882888 GCTACAGCAACCTATTTATGCCA 59.117 43.478 0.00 0.00 40.93 4.92
4471 10635 4.338118 GCTACAGCAACCTATTTATGCCAA 59.662 41.667 0.00 0.00 40.93 4.52
4472 10636 5.010012 GCTACAGCAACCTATTTATGCCAAT 59.990 40.000 0.00 0.00 40.93 3.16
4473 10637 6.206634 GCTACAGCAACCTATTTATGCCAATA 59.793 38.462 0.00 0.00 40.93 1.90
4474 10638 7.255451 GCTACAGCAACCTATTTATGCCAATAA 60.255 37.037 0.00 0.00 40.93 1.40
4475 10639 7.416964 ACAGCAACCTATTTATGCCAATAAA 57.583 32.000 0.00 0.00 41.37 1.40
4476 10640 7.846066 ACAGCAACCTATTTATGCCAATAAAA 58.154 30.769 0.00 0.00 40.69 1.52
4477 10641 8.317679 ACAGCAACCTATTTATGCCAATAAAAA 58.682 29.630 0.00 0.00 40.69 1.94
4478 10642 9.328845 CAGCAACCTATTTATGCCAATAAAAAT 57.671 29.630 0.00 0.00 40.69 1.82
4479 10643 9.328845 AGCAACCTATTTATGCCAATAAAAATG 57.671 29.630 0.00 0.00 40.69 2.32
4480 10644 9.323985 GCAACCTATTTATGCCAATAAAAATGA 57.676 29.630 0.00 0.00 40.69 2.57
4502 10666 9.822185 AATGAAATAATTAGATTTCCTTGTGCC 57.178 29.630 9.98 0.00 42.68 5.01
4503 10667 7.781056 TGAAATAATTAGATTTCCTTGTGCCC 58.219 34.615 9.98 0.00 42.68 5.36
4504 10668 7.619302 TGAAATAATTAGATTTCCTTGTGCCCT 59.381 33.333 9.98 0.00 42.68 5.19
4505 10669 7.588497 AATAATTAGATTTCCTTGTGCCCTC 57.412 36.000 0.00 0.00 0.00 4.30
4506 10670 4.870021 ATTAGATTTCCTTGTGCCCTCT 57.130 40.909 0.00 0.00 0.00 3.69
4507 10671 2.503895 AGATTTCCTTGTGCCCTCTG 57.496 50.000 0.00 0.00 0.00 3.35
4508 10672 1.005215 AGATTTCCTTGTGCCCTCTGG 59.995 52.381 0.00 0.00 0.00 3.86
4525 10689 3.673484 GGCGCTGGCAACACACAT 61.673 61.111 7.64 0.00 46.17 3.21
4526 10690 2.429571 GCGCTGGCAACACACATG 60.430 61.111 0.00 0.00 46.17 3.21
4527 10691 2.429571 CGCTGGCAACACACATGC 60.430 61.111 0.00 0.00 46.17 4.06
4533 10697 3.665544 GCAACACACATGCCTTGTT 57.334 47.368 0.00 0.00 36.00 2.83
4535 10699 1.855513 CAACACACATGCCTTGTTGG 58.144 50.000 19.68 7.67 44.18 3.77
4551 10715 1.758592 TGGCTCCACCACAACTACC 59.241 57.895 0.00 0.00 46.36 3.18
4552 10716 1.375523 GGCTCCACCACAACTACCG 60.376 63.158 0.00 0.00 38.86 4.02
4553 10717 2.033194 GCTCCACCACAACTACCGC 61.033 63.158 0.00 0.00 0.00 5.68
4554 10718 1.369692 CTCCACCACAACTACCGCA 59.630 57.895 0.00 0.00 0.00 5.69
4555 10719 0.036388 CTCCACCACAACTACCGCAT 60.036 55.000 0.00 0.00 0.00 4.73
4556 10720 1.206132 CTCCACCACAACTACCGCATA 59.794 52.381 0.00 0.00 0.00 3.14
4557 10721 1.624312 TCCACCACAACTACCGCATAA 59.376 47.619 0.00 0.00 0.00 1.90
4558 10722 2.038689 TCCACCACAACTACCGCATAAA 59.961 45.455 0.00 0.00 0.00 1.40
4559 10723 3.013921 CCACCACAACTACCGCATAAAT 58.986 45.455 0.00 0.00 0.00 1.40
4560 10724 3.442273 CCACCACAACTACCGCATAAATT 59.558 43.478 0.00 0.00 0.00 1.82
4561 10725 4.082463 CCACCACAACTACCGCATAAATTT 60.082 41.667 0.00 0.00 0.00 1.82
4562 10726 5.092781 CACCACAACTACCGCATAAATTTC 58.907 41.667 0.00 0.00 0.00 2.17
4563 10727 4.762765 ACCACAACTACCGCATAAATTTCA 59.237 37.500 0.00 0.00 0.00 2.69
4564 10728 5.241949 ACCACAACTACCGCATAAATTTCAA 59.758 36.000 0.00 0.00 0.00 2.69
4565 10729 6.071616 ACCACAACTACCGCATAAATTTCAAT 60.072 34.615 0.00 0.00 0.00 2.57
4566 10730 6.811170 CCACAACTACCGCATAAATTTCAATT 59.189 34.615 0.00 0.00 0.00 2.32
4567 10731 7.330700 CCACAACTACCGCATAAATTTCAATTT 59.669 33.333 0.00 3.13 41.24 1.82
4568 10732 8.707839 CACAACTACCGCATAAATTTCAATTTT 58.292 29.630 2.91 0.00 39.24 1.82
4569 10733 9.267084 ACAACTACCGCATAAATTTCAATTTTT 57.733 25.926 2.91 0.00 39.24 1.94
4570 10734 9.527566 CAACTACCGCATAAATTTCAATTTTTG 57.472 29.630 2.91 6.89 39.24 2.44
4579 10743 9.947669 CATAAATTTCAATTTTTGCAGTCCAAA 57.052 25.926 2.91 0.00 41.48 3.28
4604 10768 8.812513 AAAAATGAGATATGAGGATGTGAACA 57.187 30.769 0.00 0.00 0.00 3.18
4605 10769 7.798596 AAATGAGATATGAGGATGTGAACAC 57.201 36.000 0.00 0.00 0.00 3.32
4606 10770 6.744175 ATGAGATATGAGGATGTGAACACT 57.256 37.500 6.51 0.00 0.00 3.55
4607 10771 6.154203 TGAGATATGAGGATGTGAACACTC 57.846 41.667 6.51 0.00 0.00 3.51
4608 10772 5.193663 AGATATGAGGATGTGAACACTCG 57.806 43.478 6.51 0.00 32.76 4.18
4609 10773 4.646945 AGATATGAGGATGTGAACACTCGT 59.353 41.667 6.51 2.39 33.99 4.18
4610 10774 5.828328 AGATATGAGGATGTGAACACTCGTA 59.172 40.000 6.51 5.81 36.30 3.43
4611 10775 6.491745 AGATATGAGGATGTGAACACTCGTAT 59.508 38.462 12.27 12.27 42.04 3.06
4612 10776 4.371855 TGAGGATGTGAACACTCGTATC 57.628 45.455 6.51 1.43 32.76 2.24
4613 10777 4.017126 TGAGGATGTGAACACTCGTATCT 58.983 43.478 6.51 0.00 32.76 1.98
4614 10778 4.462834 TGAGGATGTGAACACTCGTATCTT 59.537 41.667 6.51 0.00 32.76 2.40
4615 10779 5.047306 TGAGGATGTGAACACTCGTATCTTT 60.047 40.000 6.51 0.00 32.76 2.52
4616 10780 5.794894 AGGATGTGAACACTCGTATCTTTT 58.205 37.500 6.51 0.00 0.00 2.27
4617 10781 6.231211 AGGATGTGAACACTCGTATCTTTTT 58.769 36.000 6.51 0.00 0.00 1.94
4618 10782 7.383687 AGGATGTGAACACTCGTATCTTTTTA 58.616 34.615 6.51 0.00 0.00 1.52
4619 10783 7.545965 AGGATGTGAACACTCGTATCTTTTTAG 59.454 37.037 6.51 0.00 0.00 1.85
4620 10784 7.544566 GGATGTGAACACTCGTATCTTTTTAGA 59.455 37.037 6.51 0.00 0.00 2.10
4621 10785 8.827177 ATGTGAACACTCGTATCTTTTTAGAA 57.173 30.769 6.51 0.00 0.00 2.10
4622 10786 8.651391 TGTGAACACTCGTATCTTTTTAGAAA 57.349 30.769 6.51 0.00 0.00 2.52
4623 10787 9.100554 TGTGAACACTCGTATCTTTTTAGAAAA 57.899 29.630 6.51 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.104776 CCATTTACCATGCTAGCAAAACG 58.895 43.478 23.54 9.99 0.00 3.60
1 2 4.159506 TCCCATTTACCATGCTAGCAAAAC 59.840 41.667 23.54 0.00 0.00 2.43
2 3 4.348486 TCCCATTTACCATGCTAGCAAAA 58.652 39.130 23.54 17.51 0.00 2.44
21 22 3.075148 CAGCATCAGATCACATCATCCC 58.925 50.000 0.00 0.00 0.00 3.85
22 23 3.997681 CTCAGCATCAGATCACATCATCC 59.002 47.826 0.00 0.00 0.00 3.51
65 846 3.256558 ACTTTAATTACCACGAGGCGTC 58.743 45.455 0.00 0.00 38.32 5.19
136 922 1.725164 GCTGTGTACTCCGTACTTTGC 59.275 52.381 5.83 3.84 39.49 3.68
153 939 6.529829 TGCAGGCGTAAAATTTAAATTAGCTG 59.470 34.615 13.68 14.83 0.00 4.24
154 940 6.626302 TGCAGGCGTAAAATTTAAATTAGCT 58.374 32.000 13.68 4.91 0.00 3.32
212 1003 3.504520 GGTTATTTCGGAGTTGCAAAGGA 59.495 43.478 0.00 0.00 0.00 3.36
220 1011 4.094830 ACACCTTGGTTATTTCGGAGTT 57.905 40.909 0.00 0.00 0.00 3.01
225 1016 4.513692 TGTCTGAACACCTTGGTTATTTCG 59.486 41.667 0.00 0.00 0.00 3.46
226 1017 5.531287 ACTGTCTGAACACCTTGGTTATTTC 59.469 40.000 0.00 0.00 0.00 2.17
235 1029 6.349445 CGATCTTACTACTGTCTGAACACCTT 60.349 42.308 0.00 0.00 0.00 3.50
237 1031 5.333513 CGATCTTACTACTGTCTGAACACC 58.666 45.833 0.00 0.00 0.00 4.16
249 1043 9.821662 AAAACTTTGTAATTGCGATCTTACTAC 57.178 29.630 0.00 0.00 0.00 2.73
250 1044 9.820229 CAAAACTTTGTAATTGCGATCTTACTA 57.180 29.630 0.00 0.00 33.59 1.82
251 1045 7.326063 GCAAAACTTTGTAATTGCGATCTTACT 59.674 33.333 4.23 0.00 38.79 2.24
252 1046 7.437124 GCAAAACTTTGTAATTGCGATCTTAC 58.563 34.615 4.23 0.00 38.79 2.34
253 1047 7.561237 GCAAAACTTTGTAATTGCGATCTTA 57.439 32.000 4.23 0.00 38.79 2.10
254 1048 6.452244 GCAAAACTTTGTAATTGCGATCTT 57.548 33.333 4.23 0.00 38.79 2.40
284 1099 6.648310 CAGAATCAGAGCAAGAAGTTACTTCA 59.352 38.462 24.57 4.17 42.37 3.02
292 1107 4.392445 CAGTTCCAGAATCAGAGCAAGAAG 59.608 45.833 0.00 0.00 0.00 2.85
358 1997 8.224389 AGTGCATGCATGTCTAATTAACAATA 57.776 30.769 25.64 0.00 0.00 1.90
417 2259 1.951209 TGGCATAGGACTGTGGAAGA 58.049 50.000 0.00 0.00 0.00 2.87
438 2290 1.818363 GTTTAGCTAGCCGCCCACC 60.818 63.158 12.13 0.00 40.39 4.61
455 2307 0.107831 TGCTTGGGCGTCTACAAAGT 59.892 50.000 0.00 0.00 42.25 2.66
487 2358 2.289444 TGCAGAGTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
488 2359 1.695242 TGCAGAGTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
489 2360 2.178912 TGCAGAGTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
490 2361 4.766404 ATTTGCAGAGTAAAAAGGACCG 57.234 40.909 0.00 0.00 0.00 4.79
491 2362 6.084326 TCAATTTGCAGAGTAAAAAGGACC 57.916 37.500 0.00 0.00 0.00 4.46
492 2363 8.593492 AATTCAATTTGCAGAGTAAAAAGGAC 57.407 30.769 0.00 0.00 0.00 3.85
493 2364 9.044150 CAAATTCAATTTGCAGAGTAAAAAGGA 57.956 29.630 9.92 0.00 42.57 3.36
508 2379 6.538381 AGTTTGACTTTCGGCAAATTCAATTT 59.462 30.769 12.32 0.00 39.55 1.82
509 2380 6.048509 AGTTTGACTTTCGGCAAATTCAATT 58.951 32.000 12.32 5.75 39.55 2.32
510 2381 5.600696 AGTTTGACTTTCGGCAAATTCAAT 58.399 33.333 12.32 2.12 39.55 2.57
511 2382 5.004922 AGTTTGACTTTCGGCAAATTCAA 57.995 34.783 0.00 9.43 38.64 2.69
512 2383 4.647424 AGTTTGACTTTCGGCAAATTCA 57.353 36.364 0.00 0.00 36.51 2.57
513 2384 5.290885 ACAAAGTTTGACTTTCGGCAAATTC 59.709 36.000 22.23 0.00 44.47 2.17
514 2385 5.175127 ACAAAGTTTGACTTTCGGCAAATT 58.825 33.333 22.23 0.00 44.47 1.82
515 2386 4.754322 ACAAAGTTTGACTTTCGGCAAAT 58.246 34.783 22.23 0.00 44.47 2.32
516 2387 4.181309 ACAAAGTTTGACTTTCGGCAAA 57.819 36.364 22.23 0.00 44.47 3.68
517 2388 3.859411 ACAAAGTTTGACTTTCGGCAA 57.141 38.095 22.23 0.00 44.47 4.52
518 2389 3.859411 AACAAAGTTTGACTTTCGGCA 57.141 38.095 22.23 0.00 44.47 5.69
519 2390 5.337554 ACTTAACAAAGTTTGACTTTCGGC 58.662 37.500 22.23 0.00 44.47 5.54
520 2391 7.806149 AAACTTAACAAAGTTTGACTTTCGG 57.194 32.000 22.23 7.59 44.47 4.30
531 2402 9.930693 TGTAAATTTGGTCAAACTTAACAAAGT 57.069 25.926 0.00 0.00 34.91 2.66
535 2406 9.319143 CCAATGTAAATTTGGTCAAACTTAACA 57.681 29.630 0.00 2.71 39.05 2.41
536 2407 9.535878 TCCAATGTAAATTTGGTCAAACTTAAC 57.464 29.630 0.00 0.00 43.41 2.01
539 2410 9.625747 ATTTCCAATGTAAATTTGGTCAAACTT 57.374 25.926 0.00 0.00 43.41 2.66
540 2411 9.625747 AATTTCCAATGTAAATTTGGTCAAACT 57.374 25.926 0.00 0.00 43.41 2.66
614 2485 9.857656 ACAACACCAATATCATTAGATTCATCT 57.142 29.630 0.00 0.00 40.86 2.90
621 2492 9.898152 TCACATAACAACACCAATATCATTAGA 57.102 29.630 0.00 0.00 0.00 2.10
624 2495 9.806203 CATTCACATAACAACACCAATATCATT 57.194 29.630 0.00 0.00 0.00 2.57
625 2496 8.970020 ACATTCACATAACAACACCAATATCAT 58.030 29.630 0.00 0.00 0.00 2.45
626 2497 8.347004 ACATTCACATAACAACACCAATATCA 57.653 30.769 0.00 0.00 0.00 2.15
627 2498 8.677300 AGACATTCACATAACAACACCAATATC 58.323 33.333 0.00 0.00 0.00 1.63
628 2499 8.579850 AGACATTCACATAACAACACCAATAT 57.420 30.769 0.00 0.00 0.00 1.28
629 2500 7.994425 AGACATTCACATAACAACACCAATA 57.006 32.000 0.00 0.00 0.00 1.90
630 2501 6.899393 AGACATTCACATAACAACACCAAT 57.101 33.333 0.00 0.00 0.00 3.16
631 2502 7.994425 ATAGACATTCACATAACAACACCAA 57.006 32.000 0.00 0.00 0.00 3.67
632 2503 9.679661 ATTATAGACATTCACATAACAACACCA 57.320 29.630 0.00 0.00 0.00 4.17
671 2542 5.474532 TCAATCTCATCCAACTTTGACCAAG 59.525 40.000 0.00 0.00 38.64 3.61
672 2543 5.241506 GTCAATCTCATCCAACTTTGACCAA 59.758 40.000 0.00 0.00 37.86 3.67
673 2544 4.761739 GTCAATCTCATCCAACTTTGACCA 59.238 41.667 0.00 0.00 37.86 4.02
674 2545 5.006386 AGTCAATCTCATCCAACTTTGACC 58.994 41.667 9.31 0.00 42.29 4.02
675 2546 6.566197 AAGTCAATCTCATCCAACTTTGAC 57.434 37.500 5.67 5.67 41.88 3.18
676 2547 5.409520 CGAAGTCAATCTCATCCAACTTTGA 59.590 40.000 0.00 0.00 32.33 2.69
677 2548 5.391310 CCGAAGTCAATCTCATCCAACTTTG 60.391 44.000 0.00 0.00 0.00 2.77
678 2549 4.697352 CCGAAGTCAATCTCATCCAACTTT 59.303 41.667 0.00 0.00 0.00 2.66
679 2550 4.020218 TCCGAAGTCAATCTCATCCAACTT 60.020 41.667 0.00 0.00 0.00 2.66
680 2551 3.515502 TCCGAAGTCAATCTCATCCAACT 59.484 43.478 0.00 0.00 0.00 3.16
681 2552 3.619038 GTCCGAAGTCAATCTCATCCAAC 59.381 47.826 0.00 0.00 0.00 3.77
682 2553 3.260632 TGTCCGAAGTCAATCTCATCCAA 59.739 43.478 0.00 0.00 0.00 3.53
683 2554 2.831526 TGTCCGAAGTCAATCTCATCCA 59.168 45.455 0.00 0.00 0.00 3.41
684 2555 3.526931 TGTCCGAAGTCAATCTCATCC 57.473 47.619 0.00 0.00 0.00 3.51
685 2556 4.093556 GGTTTGTCCGAAGTCAATCTCATC 59.906 45.833 0.00 0.00 0.00 2.92
686 2557 4.003648 GGTTTGTCCGAAGTCAATCTCAT 58.996 43.478 0.00 0.00 0.00 2.90
687 2558 3.071023 AGGTTTGTCCGAAGTCAATCTCA 59.929 43.478 0.00 0.00 41.99 3.27
688 2559 3.665190 AGGTTTGTCCGAAGTCAATCTC 58.335 45.455 0.00 0.00 41.99 2.75
689 2560 3.771577 AGGTTTGTCCGAAGTCAATCT 57.228 42.857 0.00 0.00 41.99 2.40
690 2561 7.630924 CATATTAGGTTTGTCCGAAGTCAATC 58.369 38.462 0.00 0.00 41.99 2.67
691 2562 6.038271 GCATATTAGGTTTGTCCGAAGTCAAT 59.962 38.462 0.00 0.00 41.99 2.57
692 2563 5.353123 GCATATTAGGTTTGTCCGAAGTCAA 59.647 40.000 0.00 0.00 41.99 3.18
693 2564 4.873827 GCATATTAGGTTTGTCCGAAGTCA 59.126 41.667 0.00 0.00 41.99 3.41
694 2565 4.873827 TGCATATTAGGTTTGTCCGAAGTC 59.126 41.667 0.00 0.00 41.99 3.01
695 2566 4.839121 TGCATATTAGGTTTGTCCGAAGT 58.161 39.130 0.00 0.00 41.99 3.01
696 2567 5.116180 TCTGCATATTAGGTTTGTCCGAAG 58.884 41.667 0.00 0.00 41.99 3.79
697 2568 5.092554 TCTGCATATTAGGTTTGTCCGAA 57.907 39.130 0.00 0.00 41.99 4.30
698 2569 4.161565 ACTCTGCATATTAGGTTTGTCCGA 59.838 41.667 0.00 0.00 41.99 4.55
699 2570 4.442706 ACTCTGCATATTAGGTTTGTCCG 58.557 43.478 0.00 0.00 41.99 4.79
700 2571 7.859325 TTTACTCTGCATATTAGGTTTGTCC 57.141 36.000 0.00 0.00 0.00 4.02
701 2572 9.774742 CTTTTTACTCTGCATATTAGGTTTGTC 57.225 33.333 0.00 0.00 0.00 3.18
702 2573 8.739972 CCTTTTTACTCTGCATATTAGGTTTGT 58.260 33.333 0.00 0.00 0.00 2.83
703 2574 8.956426 TCCTTTTTACTCTGCATATTAGGTTTG 58.044 33.333 0.00 0.00 0.00 2.93
704 2575 8.957466 GTCCTTTTTACTCTGCATATTAGGTTT 58.043 33.333 0.00 0.00 0.00 3.27
705 2576 7.556635 GGTCCTTTTTACTCTGCATATTAGGTT 59.443 37.037 0.00 0.00 0.00 3.50
706 2577 7.054751 GGTCCTTTTTACTCTGCATATTAGGT 58.945 38.462 0.00 0.00 0.00 3.08
707 2578 6.202954 CGGTCCTTTTTACTCTGCATATTAGG 59.797 42.308 0.00 0.00 0.00 2.69
708 2579 6.202954 CCGGTCCTTTTTACTCTGCATATTAG 59.797 42.308 0.00 0.00 0.00 1.73
709 2580 6.053005 CCGGTCCTTTTTACTCTGCATATTA 58.947 40.000 0.00 0.00 0.00 0.98
710 2581 4.881850 CCGGTCCTTTTTACTCTGCATATT 59.118 41.667 0.00 0.00 0.00 1.28
711 2582 4.163458 TCCGGTCCTTTTTACTCTGCATAT 59.837 41.667 0.00 0.00 0.00 1.78
712 2583 3.516300 TCCGGTCCTTTTTACTCTGCATA 59.484 43.478 0.00 0.00 0.00 3.14
713 2584 2.304761 TCCGGTCCTTTTTACTCTGCAT 59.695 45.455 0.00 0.00 0.00 3.96
714 2585 1.695242 TCCGGTCCTTTTTACTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
715 2586 2.347731 CTCCGGTCCTTTTTACTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
716 2587 2.354805 CCCTCCGGTCCTTTTTACTCTG 60.355 54.545 0.00 0.00 0.00 3.35
717 2588 1.907255 CCCTCCGGTCCTTTTTACTCT 59.093 52.381 0.00 0.00 0.00 3.24
718 2589 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
719 2590 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
720 2591 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
721 2592 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
722 2593 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
723 2594 2.034436 TTACTCCCTCCGGTCCTTTT 57.966 50.000 0.00 0.00 0.00 2.27
724 2595 2.265526 ATTACTCCCTCCGGTCCTTT 57.734 50.000 0.00 0.00 0.00 3.11
725 2596 3.632420 ATATTACTCCCTCCGGTCCTT 57.368 47.619 0.00 0.00 0.00 3.36
726 2597 3.921486 TCTATATTACTCCCTCCGGTCCT 59.079 47.826 0.00 0.00 0.00 3.85
727 2598 4.018597 TCTCTATATTACTCCCTCCGGTCC 60.019 50.000 0.00 0.00 0.00 4.46
728 2599 5.176741 TCTCTATATTACTCCCTCCGGTC 57.823 47.826 0.00 0.00 0.00 4.79
729 2600 5.595814 TTCTCTATATTACTCCCTCCGGT 57.404 43.478 0.00 0.00 0.00 5.28
730 2601 7.348033 ACTATTCTCTATATTACTCCCTCCGG 58.652 42.308 0.00 0.00 0.00 5.14
731 2602 8.679100 CAACTATTCTCTATATTACTCCCTCCG 58.321 40.741 0.00 0.00 0.00 4.63
732 2603 8.471609 GCAACTATTCTCTATATTACTCCCTCC 58.528 40.741 0.00 0.00 0.00 4.30
733 2604 9.026121 TGCAACTATTCTCTATATTACTCCCTC 57.974 37.037 0.00 0.00 0.00 4.30
734 2605 8.958060 TGCAACTATTCTCTATATTACTCCCT 57.042 34.615 0.00 0.00 0.00 4.20
735 2606 8.808092 ACTGCAACTATTCTCTATATTACTCCC 58.192 37.037 0.00 0.00 0.00 4.30
736 2607 9.849166 GACTGCAACTATTCTCTATATTACTCC 57.151 37.037 0.00 0.00 0.00 3.85
737 2608 9.849166 GGACTGCAACTATTCTCTATATTACTC 57.151 37.037 0.00 0.00 0.00 2.59
738 2609 9.368416 TGGACTGCAACTATTCTCTATATTACT 57.632 33.333 0.00 0.00 0.00 2.24
739 2610 9.413048 GTGGACTGCAACTATTCTCTATATTAC 57.587 37.037 0.00 0.00 0.00 1.89
740 2611 8.297426 CGTGGACTGCAACTATTCTCTATATTA 58.703 37.037 0.00 0.00 0.00 0.98
741 2612 7.148641 CGTGGACTGCAACTATTCTCTATATT 58.851 38.462 0.00 0.00 0.00 1.28
742 2613 6.265649 ACGTGGACTGCAACTATTCTCTATAT 59.734 38.462 0.00 0.00 0.00 0.86
743 2614 5.593095 ACGTGGACTGCAACTATTCTCTATA 59.407 40.000 0.00 0.00 0.00 1.31
744 2615 4.402793 ACGTGGACTGCAACTATTCTCTAT 59.597 41.667 0.00 0.00 0.00 1.98
745 2616 3.762288 ACGTGGACTGCAACTATTCTCTA 59.238 43.478 0.00 0.00 0.00 2.43
746 2617 2.563179 ACGTGGACTGCAACTATTCTCT 59.437 45.455 0.00 0.00 0.00 3.10
747 2618 2.924290 GACGTGGACTGCAACTATTCTC 59.076 50.000 0.00 0.00 0.00 2.87
748 2619 2.299013 TGACGTGGACTGCAACTATTCT 59.701 45.455 0.00 0.00 0.00 2.40
749 2620 2.683968 TGACGTGGACTGCAACTATTC 58.316 47.619 0.00 0.00 0.00 1.75
750 2621 2.831685 TGACGTGGACTGCAACTATT 57.168 45.000 0.00 0.00 0.00 1.73
757 2628 0.880278 TTGAGCTTGACGTGGACTGC 60.880 55.000 0.00 0.00 0.00 4.40
792 2669 0.923358 TGGGAGTGAAAGGTTGTGGT 59.077 50.000 0.00 0.00 0.00 4.16
804 2685 2.092375 GGTAGGGGAAGATTTGGGAGTG 60.092 54.545 0.00 0.00 0.00 3.51
907 2812 4.394712 GTGTGAGGTGAGGCGGGG 62.395 72.222 0.00 0.00 0.00 5.73
908 2813 4.394712 GGTGTGAGGTGAGGCGGG 62.395 72.222 0.00 0.00 0.00 6.13
909 2814 3.625897 TGGTGTGAGGTGAGGCGG 61.626 66.667 0.00 0.00 0.00 6.13
910 2815 2.357517 GTGGTGTGAGGTGAGGCG 60.358 66.667 0.00 0.00 0.00 5.52
911 2816 2.032681 GGTGGTGTGAGGTGAGGC 59.967 66.667 0.00 0.00 0.00 4.70
912 2817 1.372683 CTGGTGGTGTGAGGTGAGG 59.627 63.158 0.00 0.00 0.00 3.86
913 2818 1.372683 CCTGGTGGTGTGAGGTGAG 59.627 63.158 0.00 0.00 0.00 3.51
914 2819 2.146724 CCCTGGTGGTGTGAGGTGA 61.147 63.158 0.00 0.00 0.00 4.02
915 2820 1.705002 TTCCCTGGTGGTGTGAGGTG 61.705 60.000 0.00 0.00 34.77 4.00
916 2821 1.385347 TTCCCTGGTGGTGTGAGGT 60.385 57.895 0.00 0.00 34.77 3.85
917 2822 1.376466 CTTCCCTGGTGGTGTGAGG 59.624 63.158 0.00 0.00 34.77 3.86
918 2823 0.250467 CACTTCCCTGGTGGTGTGAG 60.250 60.000 0.00 0.00 39.93 3.51
919 2824 1.705002 CCACTTCCCTGGTGGTGTGA 61.705 60.000 4.87 0.00 46.42 3.58
920 2825 1.228245 CCACTTCCCTGGTGGTGTG 60.228 63.158 4.87 0.00 46.42 3.82
921 2826 3.250847 CCACTTCCCTGGTGGTGT 58.749 61.111 4.87 0.00 46.42 4.16
955 2860 1.576421 GGCTGCGGTTTCTCTTGTG 59.424 57.895 0.00 0.00 0.00 3.33
994 2929 2.999063 GCTGTTGCCCATTGCCCT 60.999 61.111 0.00 0.00 40.16 5.19
1203 3141 0.935366 GCGCGACGAGGAAATAGAGG 60.935 60.000 12.10 0.00 0.00 3.69
1496 3485 4.980805 TCACAGCGCCGTTCCCAC 62.981 66.667 2.29 0.00 0.00 4.61
1497 3486 4.980805 GTCACAGCGCCGTTCCCA 62.981 66.667 2.29 0.00 0.00 4.37
1704 3705 4.316823 TCTGCACCCCTCTCCGGT 62.317 66.667 0.00 0.00 0.00 5.28
1867 4062 6.159398 AGGCCTTAATAGCATGGCTCTATTAT 59.841 38.462 0.00 0.00 44.36 1.28
1869 4064 4.290722 AGGCCTTAATAGCATGGCTCTATT 59.709 41.667 0.00 8.53 44.36 1.73
1931 4172 8.188139 AGCAATACAAAAGGACCAATTTATACG 58.812 33.333 0.00 0.00 0.00 3.06
1986 4230 0.685097 TTGTCTTCCTTCCCACGGAG 59.315 55.000 0.00 0.00 31.21 4.63
2001 4245 9.265938 GCTTGAAAGAAAAAGAAAAACATTGTC 57.734 29.630 0.00 0.00 0.00 3.18
2013 4278 9.387123 GATACTACTGTTGCTTGAAAGAAAAAG 57.613 33.333 0.02 0.02 35.36 2.27
2031 4296 7.902920 TTTTACCGGGTAATGAGATACTACT 57.097 36.000 19.73 0.00 0.00 2.57
2065 4506 5.659079 ACATACTTTTGGGTGAAAGTTTCCA 59.341 36.000 13.01 1.82 45.05 3.53
2161 4744 5.948758 TCCATACAACATGTAAAGGCATGAA 59.051 36.000 12.27 0.00 46.65 2.57
2162 4745 5.504853 TCCATACAACATGTAAAGGCATGA 58.495 37.500 12.27 0.00 46.65 3.07
2173 4769 5.287674 ACCAGAGAGATCCATACAACATG 57.712 43.478 0.00 0.00 0.00 3.21
2177 4774 5.485353 ACTGAAACCAGAGAGATCCATACAA 59.515 40.000 0.00 0.00 35.67 2.41
2194 4791 5.163754 CCCCGTTTCTATTCATGACTGAAAC 60.164 44.000 23.52 23.52 44.29 2.78
2200 4799 3.626217 GGAACCCCGTTTCTATTCATGAC 59.374 47.826 0.00 0.00 0.00 3.06
2241 4840 0.759346 ACTATCATGAGGGCGGGAAC 59.241 55.000 0.09 0.00 0.00 3.62
2242 4841 1.048601 GACTATCATGAGGGCGGGAA 58.951 55.000 0.09 0.00 0.00 3.97
2243 4842 0.188587 AGACTATCATGAGGGCGGGA 59.811 55.000 0.09 0.00 0.00 5.14
2244 4843 1.924731 TAGACTATCATGAGGGCGGG 58.075 55.000 0.09 0.00 0.00 6.13
2245 4844 4.336889 TTTTAGACTATCATGAGGGCGG 57.663 45.455 0.09 0.00 0.00 6.13
2246 4845 6.867662 AAATTTTAGACTATCATGAGGGCG 57.132 37.500 0.09 0.00 0.00 6.13
2282 4881 3.125316 CTGTGTGGACCATTTGCAAAAG 58.875 45.455 17.19 12.00 0.00 2.27
2288 4887 3.005367 GGGTAAACTGTGTGGACCATTTG 59.995 47.826 0.00 0.00 31.41 2.32
2363 4965 9.142515 CACAATTTGCATGTCATGTTTACTTAT 57.857 29.630 14.26 0.00 0.00 1.73
2376 5001 4.043750 CGAGTGAAACACAATTTGCATGT 58.956 39.130 4.75 0.00 41.43 3.21
2484 5228 2.193127 TGGACACGTAGGGATCCAATT 58.807 47.619 15.23 0.65 38.30 2.32
2583 5333 6.716628 AGGAAAAATCTCAAACATGCTACTGA 59.283 34.615 0.00 0.00 0.00 3.41
2584 5334 6.805271 CAGGAAAAATCTCAAACATGCTACTG 59.195 38.462 0.00 0.00 0.00 2.74
2587 5337 7.707624 ATCAGGAAAAATCTCAAACATGCTA 57.292 32.000 0.00 0.00 0.00 3.49
2590 5340 7.530010 ACGTATCAGGAAAAATCTCAAACATG 58.470 34.615 0.00 0.00 0.00 3.21
2591 5341 7.687941 ACGTATCAGGAAAAATCTCAAACAT 57.312 32.000 0.00 0.00 0.00 2.71
2642 5883 7.824289 CACTCAACCAGTCAAATCCTAGAATTA 59.176 37.037 0.00 0.00 30.26 1.40
2726 5968 2.430465 GCAGCCAGAAAGTGAGAATGA 58.570 47.619 0.00 0.00 0.00 2.57
2751 5993 2.897436 TGACTGCTACTGCTATGCTTG 58.103 47.619 0.00 0.00 40.48 4.01
2785 6035 4.045636 ACTTCAGCTGCGAAACATTTTT 57.954 36.364 9.47 0.00 0.00 1.94
2814 6065 8.450578 ACAACATTGAAGATTTAGACAACTCA 57.549 30.769 0.00 0.00 0.00 3.41
2820 6071 6.902341 TGCTGACAACATTGAAGATTTAGAC 58.098 36.000 0.00 0.00 0.00 2.59
2824 6075 5.766222 GTCTGCTGACAACATTGAAGATTT 58.234 37.500 17.89 0.00 42.48 2.17
2842 6093 1.815003 AGTGGCTGCTAAAATGTCTGC 59.185 47.619 0.00 0.00 0.00 4.26
2861 6112 3.806521 CAGATAAAGAGGGAACATCGCAG 59.193 47.826 0.00 0.00 0.00 5.18
2864 6115 2.797156 CGCAGATAAAGAGGGAACATCG 59.203 50.000 0.00 0.00 0.00 3.84
2873 6124 1.936547 GCTGAACCCGCAGATAAAGAG 59.063 52.381 0.00 0.00 38.14 2.85
2887 6188 1.709147 CCATGGCTGCTACGCTGAAC 61.709 60.000 0.00 0.00 0.00 3.18
2894 6195 1.755179 AACATCACCATGGCTGCTAC 58.245 50.000 13.04 0.00 33.82 3.58
2905 6206 6.575162 AGACTTTCCACAAATAACATCACC 57.425 37.500 0.00 0.00 0.00 4.02
2906 6207 7.698130 GCATAGACTTTCCACAAATAACATCAC 59.302 37.037 0.00 0.00 0.00 3.06
2910 6211 5.703592 ACGCATAGACTTTCCACAAATAACA 59.296 36.000 0.00 0.00 0.00 2.41
3092 8780 1.806623 CGGAGCTACACTAATGGGCAC 60.807 57.143 0.00 0.00 33.08 5.01
3179 8879 6.430000 GGTCTTAGATTGCCAGTTTGACTTTA 59.570 38.462 0.00 0.00 0.00 1.85
3190 8890 4.922206 AGTTTGATGGTCTTAGATTGCCA 58.078 39.130 0.00 0.00 35.28 4.92
3198 8898 5.188948 TGCCTAAGCTAGTTTGATGGTCTTA 59.811 40.000 1.54 0.00 40.80 2.10
3199 8899 4.019321 TGCCTAAGCTAGTTTGATGGTCTT 60.019 41.667 1.54 0.00 40.80 3.01
3383 9503 4.874396 TGATGAAAAGCTCTGCTGATGTAG 59.126 41.667 0.00 0.00 39.62 2.74
3441 9564 4.229582 TGAGGGAGCCACCATTAATTTAGT 59.770 41.667 0.00 0.00 41.20 2.24
3488 9611 3.258872 TGATTGGCCAAGATTTGAACAGG 59.741 43.478 24.94 0.00 0.00 4.00
3665 9806 3.004629 CAGCTCTCTCGCTTCATGTAGAT 59.995 47.826 3.14 0.00 38.41 1.98
3668 9809 1.406898 CCAGCTCTCTCGCTTCATGTA 59.593 52.381 0.00 0.00 38.41 2.29
3671 9812 0.901124 AACCAGCTCTCTCGCTTCAT 59.099 50.000 0.00 0.00 38.41 2.57
3688 9829 1.901650 GCGGTGCTGCAGACAGTAAC 61.902 60.000 20.43 4.80 46.30 2.50
3747 9888 0.815734 CTATCGTTCCACGGGTGAGT 59.184 55.000 0.00 0.00 42.81 3.41
3775 9916 2.415512 GCGGAGTTACTGTCCATGAAAC 59.584 50.000 0.00 0.00 33.14 2.78
3786 9927 0.896940 TTCCACGAGGCGGAGTTACT 60.897 55.000 0.00 0.00 33.01 2.24
3807 9948 2.709213 GACTTCTTGCAGCTTCTGGAT 58.291 47.619 0.00 0.00 30.73 3.41
3814 9955 0.320247 CACCTCGACTTCTTGCAGCT 60.320 55.000 0.00 0.00 0.00 4.24
3838 10001 1.400530 CCATGGGGACGAGGTACTCC 61.401 65.000 2.85 0.00 45.77 3.85
3853 10016 2.231964 CCACAAATCACCTTGTCCCATG 59.768 50.000 0.00 0.00 37.43 3.66
3871 10035 0.313672 TGTCGAAAAAGCATGCCCAC 59.686 50.000 15.66 0.00 0.00 4.61
3892 10056 5.240623 TGAATGAATAGTGAACGTGCCTTTT 59.759 36.000 0.00 0.00 0.00 2.27
3939 10103 3.695830 AGTATCCGAGCTTGGTTTTGA 57.304 42.857 19.96 0.00 0.00 2.69
3970 10134 3.631686 CCACATATTCGCCCAATTCTTCA 59.368 43.478 0.00 0.00 0.00 3.02
4013 10177 0.323725 AGCGAATGCCCCAATGAGTT 60.324 50.000 0.00 0.00 44.31 3.01
4025 10189 0.110056 GTGCAGTCCACAAGCGAATG 60.110 55.000 0.00 0.00 44.06 2.67
4033 10197 2.282391 GCCATGGTGCAGTCCACA 60.282 61.111 14.67 0.00 46.50 4.17
4069 10233 6.288426 TCGATGTTCTAGTCTTCATCTACG 57.712 41.667 12.90 0.00 35.82 3.51
4086 10250 1.739466 GACAATGCACACCATCGATGT 59.261 47.619 23.27 9.39 31.43 3.06
4090 10254 0.179217 CACGACAATGCACACCATCG 60.179 55.000 0.00 0.00 31.43 3.84
4157 10321 9.909043 GACGTTTAAGTTTGTGCAAATTTTAAT 57.091 25.926 9.94 2.00 33.31 1.40
4160 10324 7.589574 AGACGTTTAAGTTTGTGCAAATTTT 57.410 28.000 9.94 6.65 33.31 1.82
4161 10325 8.865590 ATAGACGTTTAAGTTTGTGCAAATTT 57.134 26.923 9.65 9.65 35.07 1.82
4162 10326 8.865590 AATAGACGTTTAAGTTTGTGCAAATT 57.134 26.923 0.46 0.00 32.36 1.82
4163 10327 9.953697 TTAATAGACGTTTAAGTTTGTGCAAAT 57.046 25.926 0.46 0.00 32.36 2.32
4164 10328 9.953697 ATTAATAGACGTTTAAGTTTGTGCAAA 57.046 25.926 0.00 0.00 0.00 3.68
4165 10329 9.601971 GATTAATAGACGTTTAAGTTTGTGCAA 57.398 29.630 0.00 0.00 0.00 4.08
4166 10330 7.953173 CGATTAATAGACGTTTAAGTTTGTGCA 59.047 33.333 0.00 0.00 0.00 4.57
4167 10331 7.424452 CCGATTAATAGACGTTTAAGTTTGTGC 59.576 37.037 0.00 0.00 0.00 4.57
4168 10332 8.437742 ACCGATTAATAGACGTTTAAGTTTGTG 58.562 33.333 0.00 0.00 0.00 3.33
4169 10333 8.538409 ACCGATTAATAGACGTTTAAGTTTGT 57.462 30.769 0.00 0.00 0.00 2.83
4210 10374 7.275560 GTGATACCAAAGCCAATTTGTACATTC 59.724 37.037 0.00 0.00 45.78 2.67
4234 10398 3.347958 AGTGTGCACCGTTTTATTGTG 57.652 42.857 15.69 0.00 0.00 3.33
4282 10446 5.703592 TGTGTTGTTGCTTATTATCGGTCTT 59.296 36.000 0.00 0.00 0.00 3.01
4329 10493 8.067751 TCTGTTGATGCCCTATATATGTAGAC 57.932 38.462 8.00 1.25 0.00 2.59
4330 10494 8.664669 TTCTGTTGATGCCCTATATATGTAGA 57.335 34.615 8.00 0.00 0.00 2.59
4331 10495 9.539825 GATTCTGTTGATGCCCTATATATGTAG 57.460 37.037 0.00 0.00 0.00 2.74
4332 10496 9.271921 AGATTCTGTTGATGCCCTATATATGTA 57.728 33.333 0.00 0.00 0.00 2.29
4333 10497 8.155620 AGATTCTGTTGATGCCCTATATATGT 57.844 34.615 0.00 0.00 0.00 2.29
4334 10498 9.107177 GAAGATTCTGTTGATGCCCTATATATG 57.893 37.037 0.00 0.00 0.00 1.78
4335 10499 9.055689 AGAAGATTCTGTTGATGCCCTATATAT 57.944 33.333 0.00 0.00 35.89 0.86
4336 10500 8.441311 AGAAGATTCTGTTGATGCCCTATATA 57.559 34.615 0.00 0.00 35.89 0.86
4337 10501 7.237263 AGAGAAGATTCTGTTGATGCCCTATAT 59.763 37.037 0.00 0.00 37.73 0.86
4338 10502 6.556495 AGAGAAGATTCTGTTGATGCCCTATA 59.444 38.462 0.00 0.00 37.73 1.31
4339 10503 5.369110 AGAGAAGATTCTGTTGATGCCCTAT 59.631 40.000 0.00 0.00 37.73 2.57
4340 10504 4.718774 AGAGAAGATTCTGTTGATGCCCTA 59.281 41.667 0.00 0.00 37.73 3.53
4341 10505 3.522750 AGAGAAGATTCTGTTGATGCCCT 59.477 43.478 0.00 0.00 37.73 5.19
4342 10506 3.626670 CAGAGAAGATTCTGTTGATGCCC 59.373 47.826 0.00 0.00 39.76 5.36
4343 10507 4.879104 CAGAGAAGATTCTGTTGATGCC 57.121 45.455 0.00 0.00 39.76 4.40
4352 10516 7.935755 TCAAGATTCACAAACAGAGAAGATTCT 59.064 33.333 0.00 0.00 41.00 2.40
4353 10517 8.092521 TCAAGATTCACAAACAGAGAAGATTC 57.907 34.615 0.00 0.00 30.30 2.52
4354 10518 8.455903 TTCAAGATTCACAAACAGAGAAGATT 57.544 30.769 0.00 0.00 30.30 2.40
4355 10519 8.632906 ATTCAAGATTCACAAACAGAGAAGAT 57.367 30.769 0.00 0.00 30.30 2.40
4356 10520 8.455903 AATTCAAGATTCACAAACAGAGAAGA 57.544 30.769 0.00 0.00 30.30 2.87
4357 10521 8.965172 CAAATTCAAGATTCACAAACAGAGAAG 58.035 33.333 0.00 0.00 30.30 2.85
4358 10522 7.922278 CCAAATTCAAGATTCACAAACAGAGAA 59.078 33.333 0.00 0.00 0.00 2.87
4359 10523 7.068593 ACCAAATTCAAGATTCACAAACAGAGA 59.931 33.333 0.00 0.00 0.00 3.10
4360 10524 7.168637 CACCAAATTCAAGATTCACAAACAGAG 59.831 37.037 0.00 0.00 0.00 3.35
4361 10525 6.979817 CACCAAATTCAAGATTCACAAACAGA 59.020 34.615 0.00 0.00 0.00 3.41
4362 10526 6.757947 ACACCAAATTCAAGATTCACAAACAG 59.242 34.615 0.00 0.00 0.00 3.16
4363 10527 6.534436 CACACCAAATTCAAGATTCACAAACA 59.466 34.615 0.00 0.00 0.00 2.83
4364 10528 6.534793 ACACACCAAATTCAAGATTCACAAAC 59.465 34.615 0.00 0.00 0.00 2.93
4365 10529 6.534436 CACACACCAAATTCAAGATTCACAAA 59.466 34.615 0.00 0.00 0.00 2.83
4366 10530 6.041511 CACACACCAAATTCAAGATTCACAA 58.958 36.000 0.00 0.00 0.00 3.33
4367 10531 5.126869 ACACACACCAAATTCAAGATTCACA 59.873 36.000 0.00 0.00 0.00 3.58
4368 10532 5.459762 CACACACACCAAATTCAAGATTCAC 59.540 40.000 0.00 0.00 0.00 3.18
4369 10533 5.359292 TCACACACACCAAATTCAAGATTCA 59.641 36.000 0.00 0.00 0.00 2.57
4370 10534 5.830912 TCACACACACCAAATTCAAGATTC 58.169 37.500 0.00 0.00 0.00 2.52
4371 10535 5.850557 TCACACACACCAAATTCAAGATT 57.149 34.783 0.00 0.00 0.00 2.40
4372 10536 5.850557 TTCACACACACCAAATTCAAGAT 57.149 34.783 0.00 0.00 0.00 2.40
4373 10537 5.593909 AGATTCACACACACCAAATTCAAGA 59.406 36.000 0.00 0.00 0.00 3.02
4374 10538 5.835257 AGATTCACACACACCAAATTCAAG 58.165 37.500 0.00 0.00 0.00 3.02
4375 10539 5.850557 AGATTCACACACACCAAATTCAA 57.149 34.783 0.00 0.00 0.00 2.69
4376 10540 5.359292 TCAAGATTCACACACACCAAATTCA 59.641 36.000 0.00 0.00 0.00 2.57
4377 10541 5.830912 TCAAGATTCACACACACCAAATTC 58.169 37.500 0.00 0.00 0.00 2.17
4378 10542 5.850557 TCAAGATTCACACACACCAAATT 57.149 34.783 0.00 0.00 0.00 1.82
4379 10543 5.850557 TTCAAGATTCACACACACCAAAT 57.149 34.783 0.00 0.00 0.00 2.32
4380 10544 5.850557 ATTCAAGATTCACACACACCAAA 57.149 34.783 0.00 0.00 0.00 3.28
4381 10545 5.850557 AATTCAAGATTCACACACACCAA 57.149 34.783 0.00 0.00 0.00 3.67
4382 10546 5.451659 CCAAATTCAAGATTCACACACACCA 60.452 40.000 0.00 0.00 0.00 4.17
4383 10547 4.984161 CCAAATTCAAGATTCACACACACC 59.016 41.667 0.00 0.00 0.00 4.16
4384 10548 5.591099 ACCAAATTCAAGATTCACACACAC 58.409 37.500 0.00 0.00 0.00 3.82
4385 10549 5.850557 ACCAAATTCAAGATTCACACACA 57.149 34.783 0.00 0.00 0.00 3.72
4386 10550 7.425606 ACTAACCAAATTCAAGATTCACACAC 58.574 34.615 0.00 0.00 0.00 3.82
4387 10551 7.581213 ACTAACCAAATTCAAGATTCACACA 57.419 32.000 0.00 0.00 0.00 3.72
4388 10552 7.096065 GCAACTAACCAAATTCAAGATTCACAC 60.096 37.037 0.00 0.00 0.00 3.82
4389 10553 6.922957 GCAACTAACCAAATTCAAGATTCACA 59.077 34.615 0.00 0.00 0.00 3.58
4390 10554 7.147976 AGCAACTAACCAAATTCAAGATTCAC 58.852 34.615 0.00 0.00 0.00 3.18
4391 10555 7.288810 AGCAACTAACCAAATTCAAGATTCA 57.711 32.000 0.00 0.00 0.00 2.57
4392 10556 8.084684 AGAAGCAACTAACCAAATTCAAGATTC 58.915 33.333 0.00 0.00 0.00 2.52
4393 10557 7.869429 CAGAAGCAACTAACCAAATTCAAGATT 59.131 33.333 0.00 0.00 0.00 2.40
4394 10558 7.231317 TCAGAAGCAACTAACCAAATTCAAGAT 59.769 33.333 0.00 0.00 0.00 2.40
4395 10559 6.545666 TCAGAAGCAACTAACCAAATTCAAGA 59.454 34.615 0.00 0.00 0.00 3.02
4396 10560 6.738114 TCAGAAGCAACTAACCAAATTCAAG 58.262 36.000 0.00 0.00 0.00 3.02
4397 10561 6.321181 ACTCAGAAGCAACTAACCAAATTCAA 59.679 34.615 0.00 0.00 0.00 2.69
4398 10562 5.827797 ACTCAGAAGCAACTAACCAAATTCA 59.172 36.000 0.00 0.00 0.00 2.57
4399 10563 6.145535 CACTCAGAAGCAACTAACCAAATTC 58.854 40.000 0.00 0.00 0.00 2.17
4400 10564 5.507985 GCACTCAGAAGCAACTAACCAAATT 60.508 40.000 0.00 0.00 0.00 1.82
4401 10565 4.022849 GCACTCAGAAGCAACTAACCAAAT 60.023 41.667 0.00 0.00 0.00 2.32
4402 10566 3.315191 GCACTCAGAAGCAACTAACCAAA 59.685 43.478 0.00 0.00 0.00 3.28
4403 10567 2.878406 GCACTCAGAAGCAACTAACCAA 59.122 45.455 0.00 0.00 0.00 3.67
4404 10568 2.104792 AGCACTCAGAAGCAACTAACCA 59.895 45.455 0.00 0.00 0.00 3.67
4405 10569 2.739379 GAGCACTCAGAAGCAACTAACC 59.261 50.000 0.00 0.00 0.00 2.85
4406 10570 3.393800 TGAGCACTCAGAAGCAACTAAC 58.606 45.455 0.00 0.00 34.14 2.34
4407 10571 3.751479 TGAGCACTCAGAAGCAACTAA 57.249 42.857 0.00 0.00 34.14 2.24
4408 10572 3.751479 TTGAGCACTCAGAAGCAACTA 57.249 42.857 0.00 0.00 41.13 2.24
4409 10573 2.627515 TTGAGCACTCAGAAGCAACT 57.372 45.000 0.00 0.00 41.13 3.16
4410 10574 3.366719 GTTTTGAGCACTCAGAAGCAAC 58.633 45.455 4.02 0.21 41.13 4.17
4411 10575 2.358898 GGTTTTGAGCACTCAGAAGCAA 59.641 45.455 21.41 3.60 45.58 3.91
4412 10576 1.949525 GGTTTTGAGCACTCAGAAGCA 59.050 47.619 21.41 0.00 45.58 3.91
4413 10577 2.225255 GAGGTTTTGAGCACTCAGAAGC 59.775 50.000 19.70 19.70 46.19 3.86
4414 10578 2.810852 GGAGGTTTTGAGCACTCAGAAG 59.189 50.000 4.02 0.00 41.13 2.85
4415 10579 2.487265 GGGAGGTTTTGAGCACTCAGAA 60.487 50.000 0.00 0.00 41.13 3.02
4416 10580 1.072331 GGGAGGTTTTGAGCACTCAGA 59.928 52.381 0.00 0.00 41.13 3.27
4417 10581 1.202806 TGGGAGGTTTTGAGCACTCAG 60.203 52.381 0.00 0.00 41.13 3.35
4418 10582 0.843309 TGGGAGGTTTTGAGCACTCA 59.157 50.000 0.00 0.00 37.91 3.41
4419 10583 1.815003 CATGGGAGGTTTTGAGCACTC 59.185 52.381 0.00 0.00 0.00 3.51
4420 10584 1.548582 CCATGGGAGGTTTTGAGCACT 60.549 52.381 2.85 0.00 0.00 4.40
4421 10585 0.890683 CCATGGGAGGTTTTGAGCAC 59.109 55.000 2.85 0.00 0.00 4.40
4422 10586 0.482446 ACCATGGGAGGTTTTGAGCA 59.518 50.000 18.09 0.00 39.34 4.26
4423 10587 3.363787 ACCATGGGAGGTTTTGAGC 57.636 52.632 18.09 0.00 39.34 4.26
4430 10594 2.087248 CCAGGAAACCATGGGAGGT 58.913 57.895 18.09 0.00 45.91 3.85
4431 10595 1.380380 GCCAGGAAACCATGGGAGG 60.380 63.158 18.09 9.14 37.05 4.30
4432 10596 0.918983 TAGCCAGGAAACCATGGGAG 59.081 55.000 18.09 0.00 37.05 4.30
4433 10597 0.623723 GTAGCCAGGAAACCATGGGA 59.376 55.000 18.09 0.00 37.05 4.37
4434 10598 0.331278 TGTAGCCAGGAAACCATGGG 59.669 55.000 18.09 0.00 37.05 4.00
4435 10599 1.755179 CTGTAGCCAGGAAACCATGG 58.245 55.000 11.19 11.19 39.73 3.66
4436 10600 1.098050 GCTGTAGCCAGGAAACCATG 58.902 55.000 0.00 0.00 39.22 3.66
4437 10601 0.698238 TGCTGTAGCCAGGAAACCAT 59.302 50.000 0.80 0.00 35.94 3.55
4438 10602 0.476338 TTGCTGTAGCCAGGAAACCA 59.524 50.000 0.80 0.00 44.79 3.67
4439 10603 3.339547 TTGCTGTAGCCAGGAAACC 57.660 52.632 0.80 0.00 44.79 3.27
4442 10606 1.651737 TAGGTTGCTGTAGCCAGGAA 58.348 50.000 1.07 0.00 45.46 3.36
4443 10607 1.879575 ATAGGTTGCTGTAGCCAGGA 58.120 50.000 1.07 0.00 41.18 3.86
4444 10608 2.717639 AATAGGTTGCTGTAGCCAGG 57.282 50.000 1.07 0.00 41.18 4.45
4445 10609 4.023707 GCATAAATAGGTTGCTGTAGCCAG 60.024 45.833 1.07 0.00 41.18 4.85
4446 10610 3.882888 GCATAAATAGGTTGCTGTAGCCA 59.117 43.478 1.07 0.00 41.18 4.75
4447 10611 3.253432 GGCATAAATAGGTTGCTGTAGCC 59.747 47.826 0.80 0.00 41.18 3.93
4448 10612 3.882888 TGGCATAAATAGGTTGCTGTAGC 59.117 43.478 0.00 0.00 42.50 3.58
4449 10613 6.639632 ATTGGCATAAATAGGTTGCTGTAG 57.360 37.500 0.00 0.00 36.62 2.74
4450 10614 8.526667 TTTATTGGCATAAATAGGTTGCTGTA 57.473 30.769 0.00 0.00 36.62 2.74
4451 10615 7.416964 TTTATTGGCATAAATAGGTTGCTGT 57.583 32.000 0.00 0.00 36.62 4.40
4452 10616 8.715191 TTTTTATTGGCATAAATAGGTTGCTG 57.285 30.769 0.00 0.00 35.25 4.41
4453 10617 9.328845 CATTTTTATTGGCATAAATAGGTTGCT 57.671 29.630 0.00 0.00 35.25 3.91
4454 10618 9.323985 TCATTTTTATTGGCATAAATAGGTTGC 57.676 29.630 0.00 0.00 35.25 4.17
4476 10640 9.822185 GGCACAAGGAAATCTAATTATTTCATT 57.178 29.630 13.23 10.40 45.60 2.57
4477 10641 8.424133 GGGCACAAGGAAATCTAATTATTTCAT 58.576 33.333 13.23 5.77 44.28 2.57
4478 10642 7.619302 AGGGCACAAGGAAATCTAATTATTTCA 59.381 33.333 13.23 0.00 44.28 2.69
4479 10643 8.011844 AGGGCACAAGGAAATCTAATTATTTC 57.988 34.615 5.46 5.46 42.59 2.17
4480 10644 7.841222 AGAGGGCACAAGGAAATCTAATTATTT 59.159 33.333 0.00 0.00 0.00 1.40
4481 10645 7.286316 CAGAGGGCACAAGGAAATCTAATTATT 59.714 37.037 0.00 0.00 0.00 1.40
4482 10646 6.774656 CAGAGGGCACAAGGAAATCTAATTAT 59.225 38.462 0.00 0.00 0.00 1.28
4483 10647 6.122277 CAGAGGGCACAAGGAAATCTAATTA 58.878 40.000 0.00 0.00 0.00 1.40
4484 10648 4.952335 CAGAGGGCACAAGGAAATCTAATT 59.048 41.667 0.00 0.00 0.00 1.40
4485 10649 4.530875 CAGAGGGCACAAGGAAATCTAAT 58.469 43.478 0.00 0.00 0.00 1.73
4486 10650 3.308402 CCAGAGGGCACAAGGAAATCTAA 60.308 47.826 0.00 0.00 0.00 2.10
4487 10651 2.239654 CCAGAGGGCACAAGGAAATCTA 59.760 50.000 0.00 0.00 0.00 1.98
4488 10652 1.005215 CCAGAGGGCACAAGGAAATCT 59.995 52.381 0.00 0.00 0.00 2.40
4489 10653 1.467920 CCAGAGGGCACAAGGAAATC 58.532 55.000 0.00 0.00 0.00 2.17
4490 10654 0.040204 CCCAGAGGGCACAAGGAAAT 59.960 55.000 0.00 0.00 35.35 2.17
4491 10655 1.460255 CCCAGAGGGCACAAGGAAA 59.540 57.895 0.00 0.00 35.35 3.13
4492 10656 3.170362 CCCAGAGGGCACAAGGAA 58.830 61.111 0.00 0.00 35.35 3.36
4508 10672 3.673484 ATGTGTGTTGCCAGCGCC 61.673 61.111 2.29 0.00 0.00 6.53
4509 10673 2.429571 CATGTGTGTTGCCAGCGC 60.430 61.111 0.00 0.00 0.00 5.92
4510 10674 2.429571 GCATGTGTGTTGCCAGCG 60.430 61.111 0.00 0.00 33.95 5.18
4515 10679 1.210870 CAACAAGGCATGTGTGTTGC 58.789 50.000 18.72 0.00 43.88 4.17
4533 10697 1.758592 GGTAGTTGTGGTGGAGCCA 59.241 57.895 0.00 0.00 46.95 4.75
4534 10698 1.375523 CGGTAGTTGTGGTGGAGCC 60.376 63.158 0.00 0.00 37.90 4.70
4535 10699 2.033194 GCGGTAGTTGTGGTGGAGC 61.033 63.158 0.00 0.00 0.00 4.70
4536 10700 0.036388 ATGCGGTAGTTGTGGTGGAG 60.036 55.000 0.00 0.00 0.00 3.86
4537 10701 1.268066 TATGCGGTAGTTGTGGTGGA 58.732 50.000 0.00 0.00 0.00 4.02
4538 10702 2.102070 TTATGCGGTAGTTGTGGTGG 57.898 50.000 0.00 0.00 0.00 4.61
4539 10703 4.695217 AATTTATGCGGTAGTTGTGGTG 57.305 40.909 0.00 0.00 0.00 4.17
4540 10704 4.762765 TGAAATTTATGCGGTAGTTGTGGT 59.237 37.500 0.00 0.00 0.00 4.16
4541 10705 5.303747 TGAAATTTATGCGGTAGTTGTGG 57.696 39.130 0.00 0.00 0.00 4.17
4542 10706 7.810766 AATTGAAATTTATGCGGTAGTTGTG 57.189 32.000 0.00 0.00 0.00 3.33
4543 10707 8.825667 AAAATTGAAATTTATGCGGTAGTTGT 57.174 26.923 1.61 0.00 37.62 3.32
4544 10708 9.527566 CAAAAATTGAAATTTATGCGGTAGTTG 57.472 29.630 1.61 0.00 37.62 3.16
4545 10709 8.227119 GCAAAAATTGAAATTTATGCGGTAGTT 58.773 29.630 1.61 0.00 37.62 2.24
4546 10710 7.386299 TGCAAAAATTGAAATTTATGCGGTAGT 59.614 29.630 1.61 0.00 37.62 2.73
4547 10711 7.737395 TGCAAAAATTGAAATTTATGCGGTAG 58.263 30.769 1.61 0.00 37.62 3.18
4548 10712 7.386299 ACTGCAAAAATTGAAATTTATGCGGTA 59.614 29.630 17.52 1.54 37.62 4.02
4549 10713 6.204495 ACTGCAAAAATTGAAATTTATGCGGT 59.796 30.769 15.23 15.23 37.62 5.68
4550 10714 6.601264 ACTGCAAAAATTGAAATTTATGCGG 58.399 32.000 14.40 14.40 37.62 5.69
4551 10715 6.737750 GGACTGCAAAAATTGAAATTTATGCG 59.262 34.615 1.61 0.00 37.62 4.73
4552 10716 7.583230 TGGACTGCAAAAATTGAAATTTATGC 58.417 30.769 1.61 6.17 37.62 3.14
4553 10717 9.947669 TTTGGACTGCAAAAATTGAAATTTATG 57.052 25.926 1.61 0.00 37.62 1.90
4579 10743 8.680903 GTGTTCACATCCTCATATCTCATTTTT 58.319 33.333 0.00 0.00 0.00 1.94
4580 10744 8.051535 AGTGTTCACATCCTCATATCTCATTTT 58.948 33.333 5.74 0.00 0.00 1.82
4581 10745 7.571919 AGTGTTCACATCCTCATATCTCATTT 58.428 34.615 5.74 0.00 0.00 2.32
4582 10746 7.134362 AGTGTTCACATCCTCATATCTCATT 57.866 36.000 5.74 0.00 0.00 2.57
4583 10747 6.516360 CGAGTGTTCACATCCTCATATCTCAT 60.516 42.308 5.74 0.00 0.00 2.90
4584 10748 5.221126 CGAGTGTTCACATCCTCATATCTCA 60.221 44.000 5.74 0.00 0.00 3.27
4585 10749 5.218885 CGAGTGTTCACATCCTCATATCTC 58.781 45.833 5.74 0.00 0.00 2.75
4586 10750 4.646945 ACGAGTGTTCACATCCTCATATCT 59.353 41.667 5.74 0.00 0.00 1.98
4587 10751 4.938080 ACGAGTGTTCACATCCTCATATC 58.062 43.478 5.74 0.00 0.00 1.63
4588 10752 6.491745 AGATACGAGTGTTCACATCCTCATAT 59.508 38.462 5.74 0.00 0.00 1.78
4589 10753 5.828328 AGATACGAGTGTTCACATCCTCATA 59.172 40.000 5.74 0.00 0.00 2.15
4590 10754 4.646945 AGATACGAGTGTTCACATCCTCAT 59.353 41.667 5.74 0.00 0.00 2.90
4591 10755 4.017126 AGATACGAGTGTTCACATCCTCA 58.983 43.478 5.74 0.00 0.00 3.86
4592 10756 4.640789 AGATACGAGTGTTCACATCCTC 57.359 45.455 5.74 0.00 0.00 3.71
4593 10757 5.407407 AAAGATACGAGTGTTCACATCCT 57.593 39.130 5.74 0.00 0.00 3.24
4594 10758 6.481954 AAAAAGATACGAGTGTTCACATCC 57.518 37.500 5.74 0.00 0.00 3.51
4595 10759 8.462143 TCTAAAAAGATACGAGTGTTCACATC 57.538 34.615 5.74 0.31 0.00 3.06
4596 10760 8.827177 TTCTAAAAAGATACGAGTGTTCACAT 57.173 30.769 5.74 0.00 0.00 3.21
4597 10761 8.651391 TTTCTAAAAAGATACGAGTGTTCACA 57.349 30.769 5.74 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.