Multiple sequence alignment - TraesCS7B01G110800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G110800 chr7B 100.000 5943 0 0 1 5943 126754720 126760662 0.000000e+00 10975.0
1 TraesCS7B01G110800 chr7B 94.074 135 8 0 413 547 179039653 179039787 7.810000e-49 206.0
2 TraesCS7B01G110800 chr7D 87.251 2761 250 55 1778 4492 164485423 164488127 0.000000e+00 3055.0
3 TraesCS7B01G110800 chr7D 86.427 1444 88 50 4490 5909 164488176 164489535 0.000000e+00 1482.0
4 TraesCS7B01G110800 chr7D 88.799 741 37 16 828 1552 164481973 164482683 0.000000e+00 867.0
5 TraesCS7B01G110800 chr7D 89.720 214 16 2 1546 1754 164485020 164485232 9.820000e-68 268.0
6 TraesCS7B01G110800 chr7D 88.770 187 14 4 657 837 164481637 164481822 7.750000e-54 222.0
7 TraesCS7B01G110800 chr7D 96.094 128 3 2 423 549 629530514 629530388 2.170000e-49 207.0
8 TraesCS7B01G110800 chr7A 87.247 2768 242 54 1778 4492 165927978 165930687 0.000000e+00 3053.0
9 TraesCS7B01G110800 chr7A 92.845 1188 32 18 581 1754 165926645 165927793 0.000000e+00 1674.0
10 TraesCS7B01G110800 chr7A 89.074 1080 79 10 4491 5564 165930735 165931781 0.000000e+00 1304.0
11 TraesCS7B01G110800 chr7A 93.333 435 25 2 1 431 165926146 165926580 1.810000e-179 640.0
12 TraesCS7B01G110800 chr7A 94.444 72 4 0 5572 5643 165932105 165932176 1.750000e-20 111.0
13 TraesCS7B01G110800 chr7A 97.368 38 0 1 5906 5943 16242045 16242009 4.970000e-06 63.9
14 TraesCS7B01G110800 chr2B 99.160 119 1 0 430 548 653633353 653633471 1.300000e-51 215.0
15 TraesCS7B01G110800 chr3B 95.489 133 3 3 415 546 153651739 153651869 6.040000e-50 209.0
16 TraesCS7B01G110800 chr3B 88.750 160 16 2 430 589 4536839 4536682 1.690000e-45 195.0
17 TraesCS7B01G110800 chr3B 100.000 34 0 0 5910 5943 810508167 810508200 4.970000e-06 63.9
18 TraesCS7B01G110800 chr6A 96.094 128 3 2 426 552 551091872 551091746 2.170000e-49 207.0
19 TraesCS7B01G110800 chr4B 96.774 124 4 0 430 553 97557137 97557014 2.170000e-49 207.0
20 TraesCS7B01G110800 chr4A 96.094 128 3 2 428 554 646986593 646986467 2.170000e-49 207.0
21 TraesCS7B01G110800 chr2D 94.697 132 6 1 417 547 363524036 363523905 2.810000e-48 204.0
22 TraesCS7B01G110800 chr2D 100.000 34 0 0 5910 5943 391384844 391384877 4.970000e-06 63.9
23 TraesCS7B01G110800 chr2D 100.000 32 0 0 5910 5941 53363642 53363673 6.430000e-05 60.2
24 TraesCS7B01G110800 chr5D 100.000 33 0 0 5911 5943 112841070 112841102 1.790000e-05 62.1
25 TraesCS7B01G110800 chr4D 100.000 33 0 0 5910 5942 504557439 504557407 1.790000e-05 62.1
26 TraesCS7B01G110800 chr4D 100.000 32 0 0 5910 5941 299138818 299138849 6.430000e-05 60.2
27 TraesCS7B01G110800 chr3D 100.000 33 0 0 5909 5941 10697940 10697908 1.790000e-05 62.1
28 TraesCS7B01G110800 chr1D 100.000 33 0 0 5910 5942 304630199 304630167 1.790000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G110800 chr7B 126754720 126760662 5942 False 10975.0 10975 100.0000 1 5943 1 chr7B.!!$F1 5942
1 TraesCS7B01G110800 chr7D 164481637 164489535 7898 False 1178.8 3055 88.1934 657 5909 5 chr7D.!!$F1 5252
2 TraesCS7B01G110800 chr7A 165926146 165932176 6030 False 1356.4 3053 91.3886 1 5643 5 chr7A.!!$F1 5642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 453 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.0 5.23 0.0 44.66 2.17 F
451 456 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.0 5.23 0.0 44.66 2.24 F
2177 4953 0.179056 GTCTTATAGCCGCAAGCCCA 60.179 55.0 0.00 0.0 45.47 5.36 F
2488 5271 0.332293 TGCCATCCTTCCAGATTGCA 59.668 50.0 0.00 0.0 41.22 4.08 F
2999 5788 0.523072 ATGCGACACATGGTGCTTTC 59.477 50.0 0.00 0.0 37.70 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 4324 0.520404 CACAAGATGCTGCTGACACC 59.480 55.0 0.00 0.0 0.00 4.16 R
2284 5063 0.537653 CCCCTTCCTTCCTCTCGAAC 59.462 60.0 0.00 0.0 0.00 3.95 R
3432 6238 0.038159 AGAGCTCGACAACCTTTCCG 60.038 55.0 8.37 0.0 0.00 4.30 R
3729 6535 0.179032 AGAAATGCGACCACACCACA 60.179 50.0 0.00 0.0 0.00 4.17 R
4952 7818 0.036164 CACATCCGAGGAACCACCAA 59.964 55.0 0.00 0.0 42.04 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.097257 GTCCAAGTCTGAAATTGAAATTGAAAA 57.903 29.630 5.66 0.00 0.00 2.29
64 65 2.821969 CTGCTGGTAGAAAGGCAACATT 59.178 45.455 0.00 0.00 41.41 2.71
72 73 2.319472 GAAAGGCAACATTCGAACAGC 58.681 47.619 0.00 1.99 34.21 4.40
83 84 1.123077 TCGAACAGCTAGGGCATCAT 58.877 50.000 0.00 0.00 41.70 2.45
109 111 3.489416 GGAAAAGAAATGCAAACCGTCAC 59.511 43.478 0.00 0.00 0.00 3.67
153 155 1.002142 ACGAATGTGTGACGAACTCGA 60.002 47.619 6.05 0.00 43.02 4.04
157 159 0.316442 TGTGTGACGAACTCGACGAC 60.316 55.000 6.05 1.94 43.02 4.34
184 186 1.270839 ACCGTTGCAGCAACTCAGTAT 60.271 47.619 30.82 10.81 41.62 2.12
309 314 0.622665 CCTCCTTGACTCATTGGGCT 59.377 55.000 0.00 0.00 0.00 5.19
310 315 1.839994 CCTCCTTGACTCATTGGGCTA 59.160 52.381 0.00 0.00 0.00 3.93
317 322 1.001406 GACTCATTGGGCTAGATCCGG 59.999 57.143 0.00 0.00 0.00 5.14
318 323 0.321122 CTCATTGGGCTAGATCCGGC 60.321 60.000 0.00 0.00 0.00 6.13
322 327 4.671569 GGGCTAGATCCGGCGCTG 62.672 72.222 9.96 9.96 38.18 5.18
351 356 1.242076 GCCATGTGATCTATGGGTGC 58.758 55.000 22.71 10.89 44.21 5.01
435 440 9.626045 CAAGAATTTTGTTAGAATTGTACTCCC 57.374 33.333 0.00 0.00 0.00 4.30
436 441 9.588096 AAGAATTTTGTTAGAATTGTACTCCCT 57.412 29.630 0.00 0.00 0.00 4.20
437 442 9.232473 AGAATTTTGTTAGAATTGTACTCCCTC 57.768 33.333 0.00 0.00 0.00 4.30
438 443 7.939784 ATTTTGTTAGAATTGTACTCCCTCC 57.060 36.000 0.00 0.00 0.00 4.30
439 444 4.730949 TGTTAGAATTGTACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
440 445 4.091549 TGTTAGAATTGTACTCCCTCCGT 58.908 43.478 0.00 0.00 0.00 4.69
441 446 4.159135 TGTTAGAATTGTACTCCCTCCGTC 59.841 45.833 0.00 0.00 0.00 4.79
442 447 2.108970 AGAATTGTACTCCCTCCGTCC 58.891 52.381 0.00 0.00 0.00 4.79
443 448 0.822164 AATTGTACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
444 449 1.041447 ATTGTACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
445 450 2.141011 TTGTACTCCCTCCGTCCGGA 62.141 60.000 0.00 0.00 42.90 5.14
446 451 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
447 452 0.754587 GTACTCCCTCCGTCCGGAAT 60.755 60.000 5.23 0.00 44.66 3.01
448 453 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
449 454 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
450 455 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
451 456 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
452 457 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
453 458 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
454 459 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
455 460 2.537401 CTCCGTCCGGAATTACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
456 461 1.894466 TCCGTCCGGAATTACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
457 462 2.498481 TCCGTCCGGAATTACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
458 463 2.864343 CCGTCCGGAATTACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
459 464 3.517602 CGTCCGGAATTACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
460 465 3.930229 CGTCCGGAATTACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
461 466 4.390603 CGTCCGGAATTACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
462 467 5.106869 CGTCCGGAATTACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
463 468 6.403200 CGTCCGGAATTACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
464 469 6.747280 GTCCGGAATTACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
465 470 6.035843 CCGGAATTACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
466 471 6.127758 CCGGAATTACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
467 472 7.416664 CCGGAATTACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
468 473 7.433131 CGGAATTACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
521 526 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
522 527 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
524 529 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
525 530 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
527 532 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
531 536 9.028284 ACATCCATTTCAATGACAAGTATTTCT 57.972 29.630 0.81 0.00 38.70 2.52
532 537 9.297586 CATCCATTTCAATGACAAGTATTTCTG 57.702 33.333 0.81 0.00 38.70 3.02
533 538 7.829725 TCCATTTCAATGACAAGTATTTCTGG 58.170 34.615 0.81 0.00 38.70 3.86
534 539 7.669304 TCCATTTCAATGACAAGTATTTCTGGA 59.331 33.333 0.81 0.00 38.70 3.86
535 540 7.756722 CCATTTCAATGACAAGTATTTCTGGAC 59.243 37.037 0.81 0.00 38.70 4.02
536 541 6.480524 TTCAATGACAAGTATTTCTGGACG 57.519 37.500 0.00 0.00 0.00 4.79
537 542 4.935205 TCAATGACAAGTATTTCTGGACGG 59.065 41.667 0.00 0.00 0.00 4.79
538 543 4.819105 ATGACAAGTATTTCTGGACGGA 57.181 40.909 0.00 0.00 0.00 4.69
539 544 4.188247 TGACAAGTATTTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
540 545 3.056107 TGACAAGTATTTCTGGACGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
541 546 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
542 547 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
543 548 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
544 549 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
545 550 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
559 564 6.771749 ACGGAGGGAGTATATTATAGGATTCG 59.228 42.308 0.00 0.00 0.00 3.34
653 688 7.809806 GGTACTGATCCTTCACATTTCAAAAAG 59.190 37.037 0.00 0.00 0.00 2.27
730 774 6.544931 TCTTTTTCCTAGAATGAGATGCATGG 59.455 38.462 2.46 0.00 37.28 3.66
731 775 3.413846 TCCTAGAATGAGATGCATGGC 57.586 47.619 2.46 0.00 37.28 4.40
732 776 2.707257 TCCTAGAATGAGATGCATGGCA 59.293 45.455 2.46 1.55 44.86 4.92
801 846 3.285484 GACCTGAACCTACCGATCTACA 58.715 50.000 0.00 0.00 0.00 2.74
902 1112 1.959282 CAGCCAGCCAGTTCTTTTCTT 59.041 47.619 0.00 0.00 0.00 2.52
965 1175 1.878522 CCCGATTGAGGCGAGTTCG 60.879 63.158 0.00 0.00 43.27 3.95
1019 1235 4.692475 GGACGGGGGTGGTGAACG 62.692 72.222 0.00 0.00 0.00 3.95
1393 1633 1.065551 GGCAAACGACTGCACTTCTTT 59.934 47.619 13.88 0.00 44.52 2.52
1416 1656 0.670546 GTCAAGCCGTGCAGCTAGAA 60.671 55.000 0.24 0.00 44.11 2.10
1500 1740 1.314730 GCGAGAGAAGGGAGACTAGG 58.685 60.000 0.00 0.00 0.00 3.02
1626 4210 8.768397 ACACTCTCTACCATTATCACCAAATTA 58.232 33.333 0.00 0.00 0.00 1.40
1627 4211 9.784531 CACTCTCTACCATTATCACCAAATTAT 57.215 33.333 0.00 0.00 0.00 1.28
1632 4216 9.787435 TCTACCATTATCACCAAATTATACCAC 57.213 33.333 0.00 0.00 0.00 4.16
1634 4218 8.830915 ACCATTATCACCAAATTATACCACAA 57.169 30.769 0.00 0.00 0.00 3.33
1635 4219 8.912988 ACCATTATCACCAAATTATACCACAAG 58.087 33.333 0.00 0.00 0.00 3.16
1677 4266 8.950007 TTCTTATGGAATGGGAACTTTTACTT 57.050 30.769 0.00 0.00 0.00 2.24
1678 4267 8.950007 TCTTATGGAATGGGAACTTTTACTTT 57.050 30.769 0.00 0.00 0.00 2.66
1685 4274 5.782893 TGGGAACTTTTACTTTGGTGATG 57.217 39.130 0.00 0.00 0.00 3.07
1706 4295 2.804986 TGTATGATGTGGCCATGTGT 57.195 45.000 9.72 0.00 0.00 3.72
1735 4324 5.118990 CCAATATGTACACCAAGGACTCTG 58.881 45.833 0.00 0.00 0.00 3.35
1754 4343 0.520404 GGTGTCAGCAGCATCTTGTG 59.480 55.000 0.00 0.00 42.26 3.33
1755 4344 1.233019 GTGTCAGCAGCATCTTGTGT 58.767 50.000 0.00 0.00 0.00 3.72
1760 4349 4.183865 GTCAGCAGCATCTTGTGTGTATA 58.816 43.478 0.00 0.00 0.00 1.47
1761 4350 4.033358 GTCAGCAGCATCTTGTGTGTATAC 59.967 45.833 0.00 0.00 0.00 1.47
1762 4351 4.081476 TCAGCAGCATCTTGTGTGTATACT 60.081 41.667 4.17 0.00 0.00 2.12
1763 4352 5.127031 TCAGCAGCATCTTGTGTGTATACTA 59.873 40.000 4.17 0.00 0.00 1.82
1764 4353 5.812127 CAGCAGCATCTTGTGTGTATACTAA 59.188 40.000 4.17 0.00 0.00 2.24
1766 4355 7.011763 CAGCAGCATCTTGTGTGTATACTAAAT 59.988 37.037 4.17 0.00 0.00 1.40
1767 4356 7.554118 AGCAGCATCTTGTGTGTATACTAAATT 59.446 33.333 4.17 0.00 0.00 1.82
1904 4680 7.311408 ACTAATGTAGTAGGACTTTGTTCGTC 58.689 38.462 0.00 0.00 37.23 4.20
2110 4886 9.859427 TTCATTTCAGTAAAAGCAATCTATTGG 57.141 29.630 4.93 0.00 38.21 3.16
2126 4902 9.703892 CAATCTATTGGTAATAGGTTCTCTCAG 57.296 37.037 4.53 0.00 41.64 3.35
2177 4953 0.179056 GTCTTATAGCCGCAAGCCCA 60.179 55.000 0.00 0.00 45.47 5.36
2178 4954 0.179056 TCTTATAGCCGCAAGCCCAC 60.179 55.000 0.00 0.00 45.47 4.61
2179 4955 1.498865 CTTATAGCCGCAAGCCCACG 61.499 60.000 0.00 0.00 45.47 4.94
2202 4981 5.616424 CGGCTAGCTTTGAATATGAGCATTC 60.616 44.000 15.72 0.00 38.85 2.67
2219 4998 4.107622 GCATTCATCAAGGTACATGCAAC 58.892 43.478 0.00 0.00 37.54 4.17
2223 5002 4.260985 TCATCAAGGTACATGCAACGATT 58.739 39.130 0.00 0.00 0.00 3.34
2226 5005 3.435327 TCAAGGTACATGCAACGATTGTC 59.565 43.478 0.00 0.00 0.00 3.18
2232 5011 2.019249 CATGCAACGATTGTCAGGGAT 58.981 47.619 0.00 0.00 0.00 3.85
2241 5020 3.372206 CGATTGTCAGGGATGACTTTGAC 59.628 47.826 9.57 0.00 40.17 3.18
2242 5021 3.855255 TTGTCAGGGATGACTTTGACA 57.145 42.857 9.57 2.33 45.74 3.58
2261 5040 4.006319 GACAAAGAGGGAGATCAAAGTGG 58.994 47.826 0.00 0.00 0.00 4.00
2262 5041 3.245052 ACAAAGAGGGAGATCAAAGTGGG 60.245 47.826 0.00 0.00 0.00 4.61
2264 5043 0.548510 GAGGGAGATCAAAGTGGGGG 59.451 60.000 0.00 0.00 0.00 5.40
2278 5057 1.686587 GTGGGGGTTCAGGAAAAACAG 59.313 52.381 0.00 0.00 0.00 3.16
2284 5063 4.072839 GGGTTCAGGAAAAACAGAGTAGG 58.927 47.826 0.00 0.00 0.00 3.18
2288 5067 4.628074 TCAGGAAAAACAGAGTAGGTTCG 58.372 43.478 0.00 0.00 0.00 3.95
2304 5083 0.617820 TTCGAGAGGAAGGAAGGGGG 60.618 60.000 0.00 0.00 0.00 5.40
2309 5088 2.037367 GGAAGGAAGGGGGTTGGC 59.963 66.667 0.00 0.00 0.00 4.52
2337 5116 5.720971 GCGATTGCAACATTTAATTGGTTCG 60.721 40.000 0.00 3.39 42.15 3.95
2338 5117 5.344665 CGATTGCAACATTTAATTGGTTCGT 59.655 36.000 0.00 0.00 0.00 3.85
2343 5122 5.637387 GCAACATTTAATTGGTTCGTTCCAT 59.363 36.000 2.66 0.00 37.33 3.41
2360 5139 7.276658 TCGTTCCATTACAACACACCATATAT 58.723 34.615 0.00 0.00 0.00 0.86
2361 5140 8.422566 TCGTTCCATTACAACACACCATATATA 58.577 33.333 0.00 0.00 0.00 0.86
2393 5172 2.008242 AGTTGCATTGGGGCTTTGTA 57.992 45.000 0.00 0.00 34.04 2.41
2402 5181 4.978438 TTGGGGCTTTGTACTACTGTAA 57.022 40.909 0.00 0.00 0.00 2.41
2411 5191 8.562052 GGCTTTGTACTACTGTAAAGCTAAAAA 58.438 33.333 19.47 2.67 40.06 1.94
2469 5252 2.159085 GGTAGTCATTGCCTAAGCTCGT 60.159 50.000 0.00 0.00 40.80 4.18
2482 5265 1.817099 GCTCGTGCCATCCTTCCAG 60.817 63.158 0.00 0.00 0.00 3.86
2488 5271 0.332293 TGCCATCCTTCCAGATTGCA 59.668 50.000 0.00 0.00 41.22 4.08
2506 5289 3.671716 TGCAATGGATAGATGCTAGCAG 58.328 45.455 23.89 6.24 40.66 4.24
2508 5291 3.683822 GCAATGGATAGATGCTAGCAGAC 59.316 47.826 23.89 18.46 37.12 3.51
2510 5293 3.251016 TGGATAGATGCTAGCAGACCT 57.749 47.619 23.89 20.06 0.00 3.85
2546 5329 3.939592 GCTCATGTTTAGTACTTGGTCCC 59.060 47.826 0.00 0.00 33.80 4.46
2552 5335 5.942961 TGTTTAGTACTTGGTCCCAATTCA 58.057 37.500 0.00 0.00 35.20 2.57
2577 5360 4.002982 GGACATGAGTGCACTGAACAATA 58.997 43.478 27.27 1.65 35.94 1.90
2604 5387 9.213777 ACTATATCCTTCTAGACATTGGTTGAA 57.786 33.333 0.00 0.00 0.00 2.69
2646 5429 1.374758 GAGGTGGTGAACAGAGCCG 60.375 63.158 0.00 0.00 0.00 5.52
2688 5471 8.307483 GCTACTCTGTTTGGCTATCTGATATTA 58.693 37.037 0.00 0.00 0.00 0.98
2699 5482 7.290014 TGGCTATCTGATATTAAGACTTGTGGA 59.710 37.037 0.00 0.00 0.00 4.02
2707 5490 2.363306 AAGACTTGTGGATTGTGGCA 57.637 45.000 0.00 0.00 0.00 4.92
2712 5495 1.401552 CTTGTGGATTGTGGCATACCG 59.598 52.381 0.00 0.00 39.70 4.02
2731 5514 3.231160 CCGTGAACCTTTTACGCATTTC 58.769 45.455 0.00 0.00 36.56 2.17
2732 5515 3.304123 CCGTGAACCTTTTACGCATTTCA 60.304 43.478 0.00 0.00 36.56 2.69
2739 5522 6.827586 ACCTTTTACGCATTTCAAGGAATA 57.172 33.333 3.26 0.00 37.93 1.75
2742 5525 6.747280 CCTTTTACGCATTTCAAGGAATACTG 59.253 38.462 0.00 0.00 36.84 2.74
2743 5526 5.811399 TTACGCATTTCAAGGAATACTGG 57.189 39.130 0.00 0.00 0.00 4.00
2744 5527 3.950397 ACGCATTTCAAGGAATACTGGA 58.050 40.909 0.00 0.00 0.00 3.86
2786 5574 5.774179 AGTATACTTAAGGGGTGAGCAGTA 58.226 41.667 7.53 0.00 0.00 2.74
2787 5575 5.597594 AGTATACTTAAGGGGTGAGCAGTAC 59.402 44.000 7.53 0.00 0.00 2.73
2796 5584 5.742063 AGGGGTGAGCAGTACTTAATAAAC 58.258 41.667 0.00 0.00 0.00 2.01
2797 5585 5.487845 AGGGGTGAGCAGTACTTAATAAACT 59.512 40.000 0.00 0.00 0.00 2.66
2798 5586 6.012771 AGGGGTGAGCAGTACTTAATAAACTT 60.013 38.462 0.00 0.00 0.00 2.66
2799 5587 7.181485 AGGGGTGAGCAGTACTTAATAAACTTA 59.819 37.037 0.00 0.00 0.00 2.24
2800 5588 7.991460 GGGGTGAGCAGTACTTAATAAACTTAT 59.009 37.037 0.00 0.00 0.00 1.73
2801 5589 8.827677 GGGTGAGCAGTACTTAATAAACTTATG 58.172 37.037 0.00 0.00 0.00 1.90
2802 5590 9.595823 GGTGAGCAGTACTTAATAAACTTATGA 57.404 33.333 0.00 0.00 0.00 2.15
2820 5608 9.593134 AACTTATGAACAAGATGAGTAGATGAC 57.407 33.333 0.00 0.00 0.00 3.06
2833 5621 4.906618 AGTAGATGACGACCACCAAAATT 58.093 39.130 0.00 0.00 0.00 1.82
2835 5623 6.650120 AGTAGATGACGACCACCAAAATTAT 58.350 36.000 0.00 0.00 0.00 1.28
2840 5628 6.730960 TGACGACCACCAAAATTATAAGAC 57.269 37.500 0.00 0.00 0.00 3.01
2841 5629 5.644636 TGACGACCACCAAAATTATAAGACC 59.355 40.000 0.00 0.00 0.00 3.85
2865 5653 3.238597 TGTTAGGCAATGGAAGGCTTTT 58.761 40.909 0.00 0.00 42.39 2.27
2874 5662 5.336690 GCAATGGAAGGCTTTTGATGAAGTA 60.337 40.000 13.00 0.00 0.00 2.24
2905 5693 4.282496 ACTACTGTCTAAGGTCTGGATGG 58.718 47.826 0.00 0.00 0.00 3.51
2951 5739 6.176183 GCCTGTGCATATATAATCCTGAAGT 58.824 40.000 0.00 0.00 37.47 3.01
2980 5769 3.309961 TTGTGCAGTTCTTTGTTTGCA 57.690 38.095 0.00 0.00 43.62 4.08
2981 5770 3.523606 TGTGCAGTTCTTTGTTTGCAT 57.476 38.095 1.09 0.00 46.80 3.96
2987 5776 2.098934 AGTTCTTTGTTTGCATGCGACA 59.901 40.909 19.19 19.19 0.00 4.35
2998 5787 2.644887 ATGCGACACATGGTGCTTT 58.355 47.368 0.00 0.00 37.70 3.51
2999 5788 0.523072 ATGCGACACATGGTGCTTTC 59.477 50.000 0.00 0.00 37.70 2.62
3001 5790 0.523072 GCGACACATGGTGCTTTCAT 59.477 50.000 0.00 0.00 36.98 2.57
3003 5792 2.587956 CGACACATGGTGCTTTCATTG 58.412 47.619 0.00 0.00 36.98 2.82
3004 5793 2.331194 GACACATGGTGCTTTCATTGC 58.669 47.619 0.00 0.00 36.98 3.56
3005 5794 1.001181 ACACATGGTGCTTTCATTGCC 59.999 47.619 0.00 0.00 36.98 4.52
3017 5806 9.492973 GGTGCTTTCATTGCCATTATTTAATAT 57.507 29.630 0.00 0.00 0.00 1.28
3037 5826 3.260297 TGGTGTGCCAATCCTGGT 58.740 55.556 0.00 0.00 45.53 4.00
3046 5835 2.091885 TGCCAATCCTGGTAATTCCCTC 60.092 50.000 0.00 0.00 45.53 4.30
3047 5836 2.175715 GCCAATCCTGGTAATTCCCTCT 59.824 50.000 0.00 0.00 45.53 3.69
3048 5837 3.373110 GCCAATCCTGGTAATTCCCTCTT 60.373 47.826 0.00 0.00 45.53 2.85
3049 5838 4.871822 CCAATCCTGGTAATTCCCTCTTT 58.128 43.478 0.00 0.00 38.00 2.52
3050 5839 4.889995 CCAATCCTGGTAATTCCCTCTTTC 59.110 45.833 0.00 0.00 38.00 2.62
3053 5842 5.437191 TCCTGGTAATTCCCTCTTTCTTC 57.563 43.478 0.00 0.00 34.77 2.87
3061 5850 8.894731 GGTAATTCCCTCTTTCTTCAGTTTATC 58.105 37.037 0.00 0.00 0.00 1.75
3091 5880 6.251163 GCAATGCAAACCTTTGTTTTTCTTTC 59.749 34.615 0.00 0.00 41.92 2.62
3094 5883 5.994668 TGCAAACCTTTGTTTTTCTTTCTGT 59.005 32.000 0.00 0.00 41.92 3.41
3095 5884 6.073331 TGCAAACCTTTGTTTTTCTTTCTGTG 60.073 34.615 0.00 0.00 41.92 3.66
3100 5889 3.065019 TGTTTTTCTTTCTGTGCGCTC 57.935 42.857 9.73 5.51 0.00 5.03
3101 5890 2.421775 TGTTTTTCTTTCTGTGCGCTCA 59.578 40.909 9.73 11.10 0.00 4.26
3102 5891 3.066621 TGTTTTTCTTTCTGTGCGCTCAT 59.933 39.130 13.20 0.00 0.00 2.90
3103 5892 2.975410 TTTCTTTCTGTGCGCTCATG 57.025 45.000 13.20 7.50 0.00 3.07
3104 5893 1.159285 TTCTTTCTGTGCGCTCATGG 58.841 50.000 13.20 2.38 0.00 3.66
3106 5895 1.579964 CTTTCTGTGCGCTCATGGCA 61.580 55.000 13.20 0.00 41.91 4.92
3111 5900 2.269883 TGCGCTCATGGCACTGAT 59.730 55.556 9.73 0.00 41.91 2.90
3115 5917 1.807755 GCGCTCATGGCACTGATTCTA 60.808 52.381 0.00 0.00 41.91 2.10
3117 5919 3.136763 CGCTCATGGCACTGATTCTATT 58.863 45.455 0.00 0.00 41.91 1.73
3129 5931 7.445402 GGCACTGATTCTATTAGGCATTTAGAA 59.555 37.037 6.10 6.10 36.64 2.10
3132 5934 9.553064 ACTGATTCTATTAGGCATTTAGAACAG 57.447 33.333 18.34 18.34 37.27 3.16
3139 5941 7.944729 ATTAGGCATTTAGAACAGAACACAT 57.055 32.000 0.00 0.00 0.00 3.21
3145 5947 7.148086 GGCATTTAGAACAGAACACATGGATAA 60.148 37.037 0.00 0.00 0.00 1.75
3147 5949 9.778993 CATTTAGAACAGAACACATGGATAAAG 57.221 33.333 0.00 0.00 0.00 1.85
3152 5954 9.520515 AGAACAGAACACATGGATAAAGTAAAT 57.479 29.630 0.00 0.00 0.00 1.40
3153 5955 9.774742 GAACAGAACACATGGATAAAGTAAATC 57.225 33.333 0.00 0.00 0.00 2.17
3157 5959 7.611467 AGAACACATGGATAAAGTAAATCTGCA 59.389 33.333 0.00 0.00 0.00 4.41
3160 5962 6.694411 CACATGGATAAAGTAAATCTGCAAGC 59.306 38.462 0.00 0.00 0.00 4.01
3178 5980 4.554723 GCAAGCAGTCATTGTTTCGTAGTT 60.555 41.667 0.00 0.00 0.00 2.24
3182 5984 5.120830 AGCAGTCATTGTTTCGTAGTTGATC 59.879 40.000 0.00 0.00 0.00 2.92
3187 5989 6.792250 GTCATTGTTTCGTAGTTGATCAACAG 59.208 38.462 33.92 24.95 43.47 3.16
3189 5991 5.900339 TGTTTCGTAGTTGATCAACAGTC 57.100 39.130 33.92 22.87 43.47 3.51
3193 5995 7.115805 TGTTTCGTAGTTGATCAACAGTCATAC 59.884 37.037 33.92 25.28 43.47 2.39
3194 5996 6.510879 TCGTAGTTGATCAACAGTCATACT 57.489 37.500 33.92 17.29 43.47 2.12
3199 6001 9.155975 GTAGTTGATCAACAGTCATACTTGAAT 57.844 33.333 33.92 14.83 43.47 2.57
3243 6049 8.387190 TGATGACAGTCATAATGAATGATTCC 57.613 34.615 16.40 0.00 44.38 3.01
3282 6088 3.063180 GCATCACTGTCTATGCTTGTGAC 59.937 47.826 14.36 0.00 44.08 3.67
3416 6222 3.320541 CCAGGTTGGTTGTTCTGCAAATA 59.679 43.478 0.00 0.00 39.03 1.40
3430 6236 7.978414 TGTTCTGCAAATATTGTCAAAGTTCAA 59.022 29.630 0.00 0.00 0.00 2.69
3432 6238 8.351495 TCTGCAAATATTGTCAAAGTTCAAAC 57.649 30.769 0.00 0.00 0.00 2.93
3447 6253 2.663279 CAAACGGAAAGGTTGTCGAG 57.337 50.000 0.00 0.00 42.44 4.04
3455 6261 1.333177 AAGGTTGTCGAGCTCTCACT 58.667 50.000 12.85 3.09 34.30 3.41
3464 6270 3.064271 GTCGAGCTCTCACTAGGTACTTG 59.936 52.174 12.85 0.00 41.75 3.16
3469 6275 4.021016 AGCTCTCACTAGGTACTTGGTTTG 60.021 45.833 0.00 0.00 41.75 2.93
3471 6277 5.742255 GCTCTCACTAGGTACTTGGTTTGTT 60.742 44.000 0.00 0.00 41.75 2.83
3475 6281 9.092338 TCTCACTAGGTACTTGGTTTGTTTATA 57.908 33.333 0.00 0.00 41.75 0.98
3476 6282 9.886132 CTCACTAGGTACTTGGTTTGTTTATAT 57.114 33.333 0.00 0.00 41.75 0.86
3477 6283 9.661563 TCACTAGGTACTTGGTTTGTTTATATG 57.338 33.333 0.00 0.00 41.75 1.78
3478 6284 9.444600 CACTAGGTACTTGGTTTGTTTATATGT 57.555 33.333 0.00 0.00 41.75 2.29
3483 6289 9.836076 GGTACTTGGTTTGTTTATATGTTCTTC 57.164 33.333 0.00 0.00 0.00 2.87
3553 6359 5.738909 TCCTTCCAGATTCAAGTCATCTTC 58.261 41.667 0.00 0.00 0.00 2.87
3556 6362 7.126268 TCCTTCCAGATTCAAGTCATCTTCATA 59.874 37.037 0.00 0.00 0.00 2.15
3557 6363 7.226325 CCTTCCAGATTCAAGTCATCTTCATAC 59.774 40.741 0.00 0.00 0.00 2.39
3592 6398 5.251764 ACCCAATCTCACTGAAAGAAGATG 58.748 41.667 0.00 0.00 39.01 2.90
3604 6410 6.037610 ACTGAAAGAAGATGAGTGTTGTGTTC 59.962 38.462 0.00 0.00 37.43 3.18
3606 6412 4.060038 AGAAGATGAGTGTTGTGTTCGT 57.940 40.909 0.00 0.00 0.00 3.85
3621 6427 6.751514 TGTGTTCGTGGCATAGATTTTATT 57.248 33.333 0.00 0.00 0.00 1.40
3646 6452 4.751098 CCATGGTTGGTGAATTTTGTTCTG 59.249 41.667 2.57 0.00 38.30 3.02
3663 6469 4.657504 TGTTCTGCCATCTATCATTCTCCT 59.342 41.667 0.00 0.00 0.00 3.69
3707 6513 2.881074 TCAGCGTTAGATTCAGCTCAC 58.119 47.619 0.00 0.00 37.94 3.51
3716 6522 7.096394 GCGTTAGATTCAGCTCACTTATACTTC 60.096 40.741 0.00 0.00 0.00 3.01
3728 6534 9.974750 GCTCACTTATACTTCTAAATTTGACAC 57.025 33.333 0.00 0.00 0.00 3.67
3753 6559 3.823873 TGGTGTGGTCGCATTTCTATTTT 59.176 39.130 0.00 0.00 0.00 1.82
3756 6562 5.457140 GTGTGGTCGCATTTCTATTTTCAA 58.543 37.500 0.00 0.00 0.00 2.69
3762 6568 7.168972 TGGTCGCATTTCTATTTTCAAAAGTTG 59.831 33.333 0.00 0.00 0.00 3.16
3764 6570 7.998212 GTCGCATTTCTATTTTCAAAAGTTGTG 59.002 33.333 0.00 0.00 0.00 3.33
3765 6571 7.704472 TCGCATTTCTATTTTCAAAAGTTGTGT 59.296 29.630 0.00 0.00 0.00 3.72
3785 6592 9.634163 GTTGTGTTAAAAATCTAATTCCGGATT 57.366 29.630 4.15 0.00 34.14 3.01
3822 6629 3.624777 CCAATCCTTCACTATTGGTGCT 58.375 45.455 6.02 0.00 44.71 4.40
3828 6635 4.469586 TCCTTCACTATTGGTGCTCACATA 59.530 41.667 2.21 0.00 44.98 2.29
3836 6643 8.097038 CACTATTGGTGCTCACATATATACCTT 58.903 37.037 2.21 0.00 39.22 3.50
3901 6709 3.763897 AGCCATACCCTTCAACACAATTC 59.236 43.478 0.00 0.00 0.00 2.17
3921 6729 1.535015 CCAGCTACTCTAGAGCGTTGC 60.535 57.143 19.97 16.89 44.98 4.17
3933 6741 1.083401 GCGTTGCGTGTCTGTTCTG 60.083 57.895 0.00 0.00 0.00 3.02
3942 6750 2.741878 CGTGTCTGTTCTGAAACCAGGT 60.742 50.000 7.82 0.00 34.28 4.00
4042 6850 5.643379 TTGCTGACAACTCTTCTTGTTTT 57.357 34.783 0.00 0.00 34.40 2.43
4048 6856 8.078596 GCTGACAACTCTTCTTGTTTTCATATT 58.921 33.333 0.00 0.00 34.81 1.28
4121 6929 4.007659 GGGATTTCGGGAATATATGCGTT 58.992 43.478 0.00 0.00 0.00 4.84
4138 6946 2.905075 CGTTCTGATGGCACCTATTCA 58.095 47.619 0.00 0.00 0.00 2.57
4150 6958 6.899089 TGGCACCTATTCATATTTCTTCTCA 58.101 36.000 0.00 0.00 0.00 3.27
4153 6961 9.507329 GGCACCTATTCATATTTCTTCTCATTA 57.493 33.333 0.00 0.00 0.00 1.90
4260 7068 1.067565 ACAGTAGTGCACCATGAGTCG 60.068 52.381 14.63 0.00 0.00 4.18
4267 7075 0.807667 GCACCATGAGTCGGTAGCAG 60.808 60.000 0.00 0.00 34.02 4.24
4275 7083 1.142748 GTCGGTAGCAGCTGCATCT 59.857 57.895 38.24 21.89 45.16 2.90
4311 7119 3.411446 TCCATGCACAGGACAGTTTTAG 58.589 45.455 5.64 0.00 0.00 1.85
4369 7177 5.399858 TCTTGTAGAGTCGTTGTATTCAGC 58.600 41.667 0.00 0.00 0.00 4.26
4373 7181 3.579709 AGAGTCGTTGTATTCAGCTGTG 58.420 45.455 14.67 0.00 0.00 3.66
4383 7191 7.043986 CGTTGTATTCAGCTGTGTTCTAGATAC 60.044 40.741 14.67 10.24 0.00 2.24
4400 7208 3.197983 AGATACCTGTTGTTAGGGACTGC 59.802 47.826 0.00 0.00 42.35 4.40
4410 7218 4.585879 TGTTAGGGACTGCCTATTGAAAC 58.414 43.478 0.00 0.00 41.52 2.78
4417 7225 4.321230 GGACTGCCTATTGAAACAAACCAG 60.321 45.833 0.00 0.00 0.00 4.00
4456 7264 8.701643 ATATTAAGTTCCTATCTGCCCCTATT 57.298 34.615 0.00 0.00 0.00 1.73
4483 7291 0.898789 ACAGTAGGTCCAGGGTCACG 60.899 60.000 0.00 0.00 0.00 4.35
4488 7296 2.048127 GTCCAGGGTCACGCTGAC 60.048 66.667 22.99 14.45 45.41 3.51
4539 7398 6.105397 AGGCATGATTTGTTGATTGTTCTT 57.895 33.333 0.00 0.00 0.00 2.52
4549 7408 5.457140 TGTTGATTGTTCTTTATGTTCGCC 58.543 37.500 0.00 0.00 0.00 5.54
4582 7441 8.862325 TCTTTTGTGTGGATCATAGTTAATGT 57.138 30.769 0.00 0.00 36.89 2.71
4639 7498 9.413048 CGCCTTAATTTTAATTGTAGTTTGGAA 57.587 29.630 0.00 0.00 0.00 3.53
4760 7623 9.981114 TTTTCATTTCCTTCATTTTCTTAGGTC 57.019 29.630 0.00 0.00 0.00 3.85
4774 7637 4.056050 TCTTAGGTCGTTTGCTTCAGTTC 58.944 43.478 0.00 0.00 0.00 3.01
4874 7740 4.221482 ACTGCTGTGTCAGATCAGTGAATA 59.779 41.667 5.74 0.00 34.96 1.75
4915 7781 0.687427 AAAGGGTATGGGTGCATGGC 60.687 55.000 0.00 0.00 0.00 4.40
4983 7849 4.588951 TCCTCGGATGTGCTTCTAATGTAT 59.411 41.667 0.00 0.00 0.00 2.29
5011 7877 3.263261 TCTGCCGCGAACATGTAAATTA 58.737 40.909 8.23 0.00 0.00 1.40
5012 7878 3.685272 TCTGCCGCGAACATGTAAATTAA 59.315 39.130 8.23 0.00 0.00 1.40
5014 7880 3.188667 TGCCGCGAACATGTAAATTAACA 59.811 39.130 8.23 0.00 0.00 2.41
5054 7920 6.489700 TGCTTTCACTTCTTGTTAATCATGGA 59.510 34.615 0.00 0.00 0.00 3.41
5056 7922 8.031277 GCTTTCACTTCTTGTTAATCATGGATT 58.969 33.333 0.00 0.00 36.20 3.01
5069 7935 6.785337 AATCATGGATTCTTGATTTCTGCA 57.215 33.333 8.91 0.00 41.83 4.41
5092 7958 7.123418 GCAGTGTGCTTCTAACATAGAGATGT 61.123 42.308 0.00 0.00 43.55 3.06
5122 7988 4.143701 CGGTAAAACAGCAATGTTTAACGC 60.144 41.667 6.78 0.00 40.67 4.84
5141 8007 1.930371 GCACGACAAATTTCTGCACCC 60.930 52.381 0.00 0.00 0.00 4.61
5177 8043 5.474189 AGCAAGCATACCAATTTGCAAAATT 59.526 32.000 17.19 8.34 46.20 1.82
5211 8077 5.738619 ACTTCCCGTGCATGTCATATATA 57.261 39.130 4.96 0.00 0.00 0.86
5214 8080 7.847096 ACTTCCCGTGCATGTCATATATATTA 58.153 34.615 4.96 0.00 0.00 0.98
5241 8107 7.916977 TGACAGCATCAATATATTTCTTTGTGC 59.083 33.333 0.00 1.25 33.02 4.57
5272 8138 7.754924 CGTGTTTTCTGATTTTATTAGTGGCAT 59.245 33.333 0.00 0.00 0.00 4.40
5460 8327 8.147058 ACATTATTTTGTTGCACCAGATTACAA 58.853 29.630 0.00 0.00 0.00 2.41
5486 8356 2.754552 GTTGCCAAGGATGCTACAATGA 59.245 45.455 0.00 0.00 35.10 2.57
5511 8381 3.484806 TGTGTTGTGGCCGGGAGT 61.485 61.111 2.18 0.00 0.00 3.85
5525 8395 1.533625 GGGAGTTTGCAGTGCATGTA 58.466 50.000 20.50 0.12 38.76 2.29
5532 8402 4.763793 AGTTTGCAGTGCATGTAAGATCTT 59.236 37.500 20.50 13.56 38.76 2.40
5537 8407 4.261072 GCAGTGCATGTAAGATCTTCCATG 60.261 45.833 27.83 27.83 39.13 3.66
5538 8408 5.121105 CAGTGCATGTAAGATCTTCCATGA 58.879 41.667 33.24 20.33 38.63 3.07
5547 8418 8.158169 TGTAAGATCTTCCATGATAATGTTGC 57.842 34.615 12.24 0.00 0.00 4.17
5565 8436 7.843490 ATGTTGCTGTAATTATGTTCTACGT 57.157 32.000 0.00 0.00 0.00 3.57
5566 8437 8.936070 ATGTTGCTGTAATTATGTTCTACGTA 57.064 30.769 0.00 0.00 0.00 3.57
5567 8438 8.936070 TGTTGCTGTAATTATGTTCTACGTAT 57.064 30.769 0.00 0.00 0.00 3.06
5568 8439 8.813282 TGTTGCTGTAATTATGTTCTACGTATG 58.187 33.333 0.00 0.00 0.00 2.39
5569 8440 8.814235 GTTGCTGTAATTATGTTCTACGTATGT 58.186 33.333 0.00 0.00 0.00 2.29
5616 8803 2.721274 AATTTGCAGCATGTACGCAA 57.279 40.000 12.57 12.57 43.52 4.85
5627 8814 5.852755 CAGCATGTACGCAAATGTTATATGG 59.147 40.000 0.00 0.00 0.00 2.74
5632 8819 9.706846 CATGTACGCAAATGTTATATGGATATG 57.293 33.333 0.00 0.00 0.00 1.78
5714 8901 8.447833 GTCGGAAACATTTTATATGAACAGACA 58.552 33.333 0.00 0.00 0.00 3.41
5751 8938 1.401905 GCAAGTAGTAGTGGCATTGGC 59.598 52.381 2.73 2.73 40.13 4.52
5754 8941 3.652057 AGTAGTAGTGGCATTGGCAAT 57.348 42.857 17.36 17.36 43.71 3.56
5757 8944 3.874392 AGTAGTGGCATTGGCAATTTC 57.126 42.857 18.38 11.82 43.71 2.17
5763 8950 0.732196 GCATTGGCAATTTCGCGTCA 60.732 50.000 10.65 0.00 40.72 4.35
5771 8958 2.427169 CAATTTCGCGTCATAACACCG 58.573 47.619 5.77 0.00 0.00 4.94
5776 8963 0.092351 CGCGTCATAACACCGTTCAC 59.908 55.000 0.00 0.00 0.00 3.18
5811 8998 5.776744 AGATCAGAACAAAATTCAGTTGCC 58.223 37.500 0.00 0.00 0.00 4.52
5820 9020 1.471119 ATTCAGTTGCCATGGAGCTG 58.529 50.000 18.40 18.58 0.00 4.24
5832 9032 2.268076 GGAGCTGGCCGAAGCAAAA 61.268 57.895 16.78 0.00 46.08 2.44
5839 9039 3.244976 CTGGCCGAAGCAAAATTTAGTG 58.755 45.455 0.00 0.00 42.56 2.74
5854 9054 7.764695 AAATTTAGTGCTACCACAAACAAAC 57.235 32.000 0.00 0.00 44.53 2.93
5858 9058 4.490743 AGTGCTACCACAAACAAACAAAC 58.509 39.130 0.00 0.00 44.53 2.93
5863 9063 5.006261 GCTACCACAAACAAACAAACCATTC 59.994 40.000 0.00 0.00 0.00 2.67
5866 9066 2.933260 ACAAACAAACAAACCATTCCGC 59.067 40.909 0.00 0.00 0.00 5.54
5873 9073 1.967066 ACAAACCATTCCGCATTTCCA 59.033 42.857 0.00 0.00 0.00 3.53
5882 9082 1.505807 CGCATTTCCATTGGACGCA 59.494 52.632 4.45 0.00 0.00 5.24
5904 9104 6.183360 CGCAAGTTTTTGTCACATCAAAGAAA 60.183 34.615 0.00 0.00 38.32 2.52
5905 9105 7.175410 GCAAGTTTTTGTCACATCAAAGAAAG 58.825 34.615 0.00 0.00 38.32 2.62
5906 9106 7.148590 GCAAGTTTTTGTCACATCAAAGAAAGT 60.149 33.333 0.00 0.00 38.32 2.66
5907 9107 9.352784 CAAGTTTTTGTCACATCAAAGAAAGTA 57.647 29.630 0.00 0.00 38.32 2.24
5908 9108 8.911247 AGTTTTTGTCACATCAAAGAAAGTAC 57.089 30.769 0.00 0.00 38.32 2.73
5909 9109 7.696453 AGTTTTTGTCACATCAAAGAAAGTACG 59.304 33.333 0.00 0.00 38.32 3.67
5910 9110 5.666969 TTGTCACATCAAAGAAAGTACGG 57.333 39.130 0.00 0.00 0.00 4.02
5911 9111 4.062293 TGTCACATCAAAGAAAGTACGGG 58.938 43.478 0.00 0.00 0.00 5.28
5912 9112 3.071479 TCACATCAAAGAAAGTACGGGC 58.929 45.455 0.00 0.00 0.00 6.13
5913 9113 2.073816 ACATCAAAGAAAGTACGGGCG 58.926 47.619 0.00 0.00 0.00 6.13
5914 9114 1.084289 ATCAAAGAAAGTACGGGCGC 58.916 50.000 0.00 0.00 0.00 6.53
5915 9115 0.034337 TCAAAGAAAGTACGGGCGCT 59.966 50.000 7.64 0.00 0.00 5.92
5916 9116 0.165944 CAAAGAAAGTACGGGCGCTG 59.834 55.000 7.64 2.40 0.00 5.18
5917 9117 0.034337 AAAGAAAGTACGGGCGCTGA 59.966 50.000 7.64 0.00 0.00 4.26
5918 9118 0.249398 AAGAAAGTACGGGCGCTGAT 59.751 50.000 7.64 0.00 0.00 2.90
5919 9119 1.108776 AGAAAGTACGGGCGCTGATA 58.891 50.000 7.64 0.00 0.00 2.15
5920 9120 1.067212 AGAAAGTACGGGCGCTGATAG 59.933 52.381 7.64 0.00 0.00 2.08
5921 9121 0.104304 AAAGTACGGGCGCTGATAGG 59.896 55.000 7.64 0.00 0.00 2.57
5922 9122 2.355956 GTACGGGCGCTGATAGGC 60.356 66.667 7.64 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.836125 TCAATTTCAGACTTGGACAAGC 57.164 40.909 11.73 5.39 41.99 4.01
19 20 9.910511 CAGTTTTCAATTTCAATTTCAGACTTG 57.089 29.630 0.00 0.00 0.00 3.16
42 43 1.142870 TGTTGCCTTTCTACCAGCAGT 59.857 47.619 0.00 0.00 36.44 4.40
64 65 1.069204 GATGATGCCCTAGCTGTTCGA 59.931 52.381 0.00 0.00 40.80 3.71
72 73 0.764890 TTTCCGGGATGATGCCCTAG 59.235 55.000 0.00 0.00 46.44 3.02
83 84 2.036604 GGTTTGCATTTCTTTTCCGGGA 59.963 45.455 0.00 0.00 0.00 5.14
109 111 1.784283 GGTTTGCGTTTCGACAATTGG 59.216 47.619 10.83 0.00 0.00 3.16
135 137 1.382419 CGTCGAGTTCGTCACACATTC 59.618 52.381 1.07 0.00 40.80 2.67
145 147 2.340577 GGTTTATGTGTCGTCGAGTTCG 59.659 50.000 0.00 0.00 41.45 3.95
149 151 1.973138 ACGGTTTATGTGTCGTCGAG 58.027 50.000 0.00 0.00 0.00 4.04
153 155 1.529438 CTGCAACGGTTTATGTGTCGT 59.471 47.619 0.00 0.00 37.45 4.34
157 159 2.050691 GTTGCTGCAACGGTTTATGTG 58.949 47.619 27.40 0.00 34.63 3.21
184 186 1.621317 TCACTGGTTTGCAGTATCCGA 59.379 47.619 0.00 0.00 0.00 4.55
273 278 2.357154 GGAGGGCCAAATGTGATACTGT 60.357 50.000 6.18 0.00 0.00 3.55
276 281 2.689983 CAAGGAGGGCCAAATGTGATAC 59.310 50.000 6.18 0.00 36.29 2.24
309 314 4.592192 GCTGCAGCGCCGGATCTA 62.592 66.667 25.23 0.00 0.00 1.98
322 327 2.203972 ATCACATGGCGTGTTGCTGC 62.204 55.000 10.21 0.00 46.44 5.25
331 336 1.516161 CACCCATAGATCACATGGCG 58.484 55.000 17.07 13.48 41.46 5.69
346 351 4.754667 GAGGAACCGGACGCACCC 62.755 72.222 9.46 0.00 34.64 4.61
351 356 1.019673 TTAGATCGAGGAACCGGACG 58.980 55.000 9.46 5.93 0.00 4.79
431 436 0.388294 GTAATTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
432 437 0.032813 AGTAATTCCGGACGGAGGGA 60.033 55.000 13.64 0.00 46.06 4.20
433 438 0.828677 AAGTAATTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
434 439 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
435 440 2.094390 TGACAAGTAATTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
436 441 1.894466 TGACAAGTAATTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
437 442 2.373540 TGACAAGTAATTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
438 443 3.517602 TGATGACAAGTAATTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
439 444 5.873179 TTTGATGACAAGTAATTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
440 445 6.127758 CCATTTTGATGACAAGTAATTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
441 446 6.035843 CCATTTTGATGACAAGTAATTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
442 447 6.851609 TCCATTTTGATGACAAGTAATTCCG 58.148 36.000 0.00 0.00 37.32 4.30
443 448 8.469200 TCATCCATTTTGATGACAAGTAATTCC 58.531 33.333 0.00 0.00 44.65 3.01
495 500 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
496 501 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
498 503 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
499 504 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
501 506 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
505 510 9.028284 AGAAATACTTGTCATTGAAATGGATGT 57.972 29.630 3.31 2.77 37.03 3.06
506 511 9.297586 CAGAAATACTTGTCATTGAAATGGATG 57.702 33.333 3.31 0.00 37.03 3.51
507 512 8.472413 CCAGAAATACTTGTCATTGAAATGGAT 58.528 33.333 3.31 0.00 37.03 3.41
508 513 7.669304 TCCAGAAATACTTGTCATTGAAATGGA 59.331 33.333 3.31 0.00 37.03 3.41
509 514 7.756722 GTCCAGAAATACTTGTCATTGAAATGG 59.243 37.037 3.31 0.00 37.03 3.16
510 515 7.482743 CGTCCAGAAATACTTGTCATTGAAATG 59.517 37.037 0.00 0.00 37.75 2.32
511 516 7.362056 CCGTCCAGAAATACTTGTCATTGAAAT 60.362 37.037 0.00 0.00 0.00 2.17
512 517 6.072728 CCGTCCAGAAATACTTGTCATTGAAA 60.073 38.462 0.00 0.00 0.00 2.69
513 518 5.411361 CCGTCCAGAAATACTTGTCATTGAA 59.589 40.000 0.00 0.00 0.00 2.69
514 519 4.935205 CCGTCCAGAAATACTTGTCATTGA 59.065 41.667 0.00 0.00 0.00 2.57
515 520 4.935205 TCCGTCCAGAAATACTTGTCATTG 59.065 41.667 0.00 0.00 0.00 2.82
516 521 5.160607 TCCGTCCAGAAATACTTGTCATT 57.839 39.130 0.00 0.00 0.00 2.57
517 522 4.383118 CCTCCGTCCAGAAATACTTGTCAT 60.383 45.833 0.00 0.00 0.00 3.06
518 523 3.056107 CCTCCGTCCAGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
519 524 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
520 525 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
521 526 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
522 527 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
523 528 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
524 529 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
525 530 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
526 531 2.544844 TACTCCCTCCGTCCAGAAAT 57.455 50.000 0.00 0.00 0.00 2.17
527 532 2.544844 ATACTCCCTCCGTCCAGAAA 57.455 50.000 0.00 0.00 0.00 2.52
528 533 3.897657 ATATACTCCCTCCGTCCAGAA 57.102 47.619 0.00 0.00 0.00 3.02
529 534 3.897657 AATATACTCCCTCCGTCCAGA 57.102 47.619 0.00 0.00 0.00 3.86
530 535 5.828859 CCTATAATATACTCCCTCCGTCCAG 59.171 48.000 0.00 0.00 0.00 3.86
531 536 5.493613 TCCTATAATATACTCCCTCCGTCCA 59.506 44.000 0.00 0.00 0.00 4.02
532 537 6.011122 TCCTATAATATACTCCCTCCGTCC 57.989 45.833 0.00 0.00 0.00 4.79
533 538 7.041235 CGAATCCTATAATATACTCCCTCCGTC 60.041 44.444 0.00 0.00 0.00 4.79
534 539 6.771749 CGAATCCTATAATATACTCCCTCCGT 59.228 42.308 0.00 0.00 0.00 4.69
535 540 6.771749 ACGAATCCTATAATATACTCCCTCCG 59.228 42.308 0.00 0.00 0.00 4.63
536 541 8.536340 AACGAATCCTATAATATACTCCCTCC 57.464 38.462 0.00 0.00 0.00 4.30
627 662 6.817765 TTTGAAATGTGAAGGATCAGTACC 57.182 37.500 0.00 0.00 35.88 3.34
636 671 7.548780 TGAGTTTTCCTTTTTGAAATGTGAAGG 59.451 33.333 0.71 0.71 38.54 3.46
730 774 7.929785 AGGGTCATATGAAATGAAATGAAATGC 59.070 33.333 7.07 0.00 30.60 3.56
731 775 9.256477 CAGGGTCATATGAAATGAAATGAAATG 57.744 33.333 7.07 0.00 30.60 2.32
732 776 9.204337 TCAGGGTCATATGAAATGAAATGAAAT 57.796 29.630 7.07 0.00 30.60 2.17
733 777 8.592529 TCAGGGTCATATGAAATGAAATGAAA 57.407 30.769 7.07 0.00 30.60 2.69
734 778 8.469200 GTTCAGGGTCATATGAAATGAAATGAA 58.531 33.333 21.14 15.09 37.19 2.57
735 779 7.201723 CGTTCAGGGTCATATGAAATGAAATGA 60.202 37.037 21.14 11.45 37.19 2.57
902 1112 1.262640 GGACTAAAGAGGTGCGGGGA 61.263 60.000 0.00 0.00 0.00 4.81
966 1176 0.667487 TTCTTCGCTGCGACCTTCAG 60.667 55.000 25.94 18.56 34.89 3.02
967 1177 0.249699 TTTCTTCGCTGCGACCTTCA 60.250 50.000 25.94 8.83 34.89 3.02
968 1178 0.440371 CTTTCTTCGCTGCGACCTTC 59.560 55.000 25.94 0.00 34.89 3.46
969 1179 0.033504 TCTTTCTTCGCTGCGACCTT 59.966 50.000 25.94 0.00 34.89 3.50
970 1180 0.667792 GTCTTTCTTCGCTGCGACCT 60.668 55.000 25.94 0.00 34.89 3.85
1019 1235 1.064389 CCTCTTTCTTGGTGATCCCCC 60.064 57.143 0.00 0.00 0.00 5.40
1288 1504 8.651589 ATCTAGTTCATATTCCTACCGAATCA 57.348 34.615 0.00 0.00 40.51 2.57
1289 1505 8.740906 TGATCTAGTTCATATTCCTACCGAATC 58.259 37.037 0.00 0.00 40.51 2.52
1393 1633 2.031012 CTGCACGGCTTGACTCCA 59.969 61.111 0.00 0.00 0.00 3.86
1399 1639 0.874390 TTTTCTAGCTGCACGGCTTG 59.126 50.000 9.65 7.94 42.97 4.01
1440 1680 5.519927 GCACTGTTACTTTGCTGATGTTTTT 59.480 36.000 2.32 0.00 33.26 1.94
1441 1681 5.043248 GCACTGTTACTTTGCTGATGTTTT 58.957 37.500 2.32 0.00 33.26 2.43
1442 1682 4.097741 TGCACTGTTACTTTGCTGATGTTT 59.902 37.500 9.45 0.00 37.16 2.83
1443 1683 3.631686 TGCACTGTTACTTTGCTGATGTT 59.368 39.130 9.45 0.00 37.16 2.71
1444 1684 3.213506 TGCACTGTTACTTTGCTGATGT 58.786 40.909 9.45 0.00 37.16 3.06
1445 1685 3.902261 TGCACTGTTACTTTGCTGATG 57.098 42.857 9.45 0.00 37.16 3.07
1446 1686 3.822735 ACATGCACTGTTACTTTGCTGAT 59.177 39.130 9.45 0.00 37.16 2.90
1447 1687 3.003585 CACATGCACTGTTACTTTGCTGA 59.996 43.478 9.45 0.00 35.29 4.26
1448 1688 3.243168 ACACATGCACTGTTACTTTGCTG 60.243 43.478 9.45 7.86 35.29 4.41
1449 1689 2.951642 ACACATGCACTGTTACTTTGCT 59.048 40.909 9.45 0.00 35.29 3.91
1630 4214 2.616376 TGAACAAACGGACCATCTTGTG 59.384 45.455 4.15 0.00 32.50 3.33
1632 4216 4.216257 AGAATGAACAAACGGACCATCTTG 59.784 41.667 0.00 0.00 0.00 3.02
1634 4218 4.021102 AGAATGAACAAACGGACCATCT 57.979 40.909 0.00 0.00 0.00 2.90
1635 4219 4.766404 AAGAATGAACAAACGGACCATC 57.234 40.909 0.00 0.00 0.00 3.51
1637 4221 4.457603 CCATAAGAATGAACAAACGGACCA 59.542 41.667 0.00 0.00 34.84 4.02
1638 4222 4.698304 TCCATAAGAATGAACAAACGGACC 59.302 41.667 0.00 0.00 34.84 4.46
1677 4266 3.884693 GCCACATCATACATCATCACCAA 59.115 43.478 0.00 0.00 0.00 3.67
1678 4267 3.479489 GCCACATCATACATCATCACCA 58.521 45.455 0.00 0.00 0.00 4.17
1685 4274 3.004002 CACACATGGCCACATCATACATC 59.996 47.826 8.16 0.00 34.35 3.06
1706 4295 7.346175 AGTCCTTGGTGTACATATTGGTATACA 59.654 37.037 5.01 0.00 37.17 2.29
1735 4324 0.520404 CACAAGATGCTGCTGACACC 59.480 55.000 0.00 0.00 0.00 4.16
1904 4680 9.859427 TTAAATTGATTTGCAGGAACTAATGAG 57.141 29.630 0.00 0.00 36.02 2.90
2099 4875 8.150945 TGAGAGAACCTATTACCAATAGATTGC 58.849 37.037 7.37 0.00 42.80 3.56
2110 4886 5.584253 TCTGCACTGAGAGAACCTATTAC 57.416 43.478 0.00 0.00 0.00 1.89
2177 4953 3.134458 GCTCATATTCAAAGCTAGCCGT 58.866 45.455 12.13 0.00 33.23 5.68
2178 4954 3.133691 TGCTCATATTCAAAGCTAGCCG 58.866 45.455 12.13 0.00 36.96 5.52
2179 4955 5.240183 TGAATGCTCATATTCAAAGCTAGCC 59.760 40.000 12.13 0.00 42.39 3.93
2202 4981 4.142622 ACAATCGTTGCATGTACCTTGATG 60.143 41.667 0.00 0.00 0.00 3.07
2226 5005 3.755378 CCTCTTTGTCAAAGTCATCCCTG 59.245 47.826 21.81 6.38 39.52 4.45
2232 5011 4.347876 TGATCTCCCTCTTTGTCAAAGTCA 59.652 41.667 21.81 14.39 39.52 3.41
2241 5020 3.350833 CCCACTTTGATCTCCCTCTTTG 58.649 50.000 0.00 0.00 0.00 2.77
2242 5021 2.310052 CCCCACTTTGATCTCCCTCTTT 59.690 50.000 0.00 0.00 0.00 2.52
2261 5040 2.945456 ACTCTGTTTTTCCTGAACCCC 58.055 47.619 0.00 0.00 0.00 4.95
2262 5041 4.072839 CCTACTCTGTTTTTCCTGAACCC 58.927 47.826 0.00 0.00 0.00 4.11
2264 5043 5.050295 CGAACCTACTCTGTTTTTCCTGAAC 60.050 44.000 0.00 0.00 0.00 3.18
2278 5057 3.002038 TCCTTCCTCTCGAACCTACTC 57.998 52.381 0.00 0.00 0.00 2.59
2284 5063 0.537653 CCCCTTCCTTCCTCTCGAAC 59.462 60.000 0.00 0.00 0.00 3.95
2288 5067 0.621082 CAACCCCCTTCCTTCCTCTC 59.379 60.000 0.00 0.00 0.00 3.20
2304 5083 2.484662 TGCAATCGCATCGCCAAC 59.515 55.556 0.00 0.00 45.36 3.77
2315 5094 6.704512 ACGAACCAATTAAATGTTGCAATC 57.295 33.333 0.59 0.00 0.00 2.67
2323 5102 8.643752 GTTGTAATGGAACGAACCAATTAAATG 58.356 33.333 9.02 0.00 43.47 2.32
2327 5106 6.262496 TGTGTTGTAATGGAACGAACCAATTA 59.738 34.615 9.02 6.48 43.47 1.40
2328 5107 5.067936 TGTGTTGTAATGGAACGAACCAATT 59.932 36.000 9.02 7.21 43.47 2.32
2329 5108 4.580995 TGTGTTGTAATGGAACGAACCAAT 59.419 37.500 9.02 4.39 43.47 3.16
2330 5109 3.945921 TGTGTTGTAATGGAACGAACCAA 59.054 39.130 9.02 0.00 43.47 3.67
2360 5139 8.482128 CCCCAATGCAACTTTTCCTTATTTATA 58.518 33.333 0.00 0.00 0.00 0.98
2361 5140 7.337938 CCCCAATGCAACTTTTCCTTATTTAT 58.662 34.615 0.00 0.00 0.00 1.40
2369 5148 0.686789 AGCCCCAATGCAACTTTTCC 59.313 50.000 0.00 0.00 0.00 3.13
2381 5160 4.978438 TTACAGTAGTACAAAGCCCCAA 57.022 40.909 2.52 0.00 0.00 4.12
2442 5222 1.879575 AGGCAATGACTACCTGGCTA 58.120 50.000 0.00 0.00 43.47 3.93
2443 5223 1.879575 TAGGCAATGACTACCTGGCT 58.120 50.000 0.00 2.83 46.54 4.75
2444 5224 2.565841 CTTAGGCAATGACTACCTGGC 58.434 52.381 0.00 0.00 34.92 4.85
2445 5225 2.171448 AGCTTAGGCAATGACTACCTGG 59.829 50.000 0.00 0.00 41.70 4.45
2446 5226 3.462021 GAGCTTAGGCAATGACTACCTG 58.538 50.000 0.00 0.00 41.70 4.00
2447 5227 2.101582 CGAGCTTAGGCAATGACTACCT 59.898 50.000 0.00 0.00 41.70 3.08
2456 5236 0.744414 GATGGCACGAGCTTAGGCAA 60.744 55.000 12.79 0.00 41.29 4.52
2469 5252 0.332293 TGCAATCTGGAAGGATGGCA 59.668 50.000 2.80 2.80 46.63 4.92
2482 5265 4.698780 TGCTAGCATCTATCCATTGCAATC 59.301 41.667 14.93 0.00 38.84 2.67
2488 5271 4.020396 CAGGTCTGCTAGCATCTATCCATT 60.020 45.833 19.72 0.00 0.00 3.16
2506 5289 1.028868 GCTGATTCAGTGGGCAGGTC 61.029 60.000 14.90 0.00 33.43 3.85
2508 5291 0.747283 GAGCTGATTCAGTGGGCAGG 60.747 60.000 14.90 0.00 33.43 4.85
2510 5293 0.622136 ATGAGCTGATTCAGTGGGCA 59.378 50.000 14.90 8.48 33.43 5.36
2518 5301 6.595716 ACCAAGTACTAAACATGAGCTGATTC 59.404 38.462 0.00 0.00 0.00 2.52
2546 5329 4.082408 AGTGCACTCATGTCCAATGAATTG 60.082 41.667 15.25 0.00 37.52 2.32
2552 5335 2.816087 GTTCAGTGCACTCATGTCCAAT 59.184 45.455 18.64 0.00 0.00 3.16
2559 5342 9.265901 GATATAGTTATTGTTCAGTGCACTCAT 57.734 33.333 18.64 6.80 0.00 2.90
2577 5360 9.213777 TCAACCAATGTCTAGAAGGATATAGTT 57.786 33.333 0.00 0.00 0.00 2.24
2620 5403 3.882888 TCTGTTCACCACCTCAATTTGAC 59.117 43.478 0.00 0.00 0.00 3.18
2688 5471 2.363306 TGCCACAATCCACAAGTCTT 57.637 45.000 0.00 0.00 0.00 3.01
2699 5482 1.004277 AGGTTCACGGTATGCCACAAT 59.996 47.619 0.00 0.00 34.09 2.71
2707 5490 3.042871 TGCGTAAAAGGTTCACGGTAT 57.957 42.857 0.00 0.00 36.23 2.73
2712 5495 4.679654 CCTTGAAATGCGTAAAAGGTTCAC 59.320 41.667 6.18 0.00 34.04 3.18
2754 5537 9.275572 TCACCCCTTAAGTATACTCTTTTACAT 57.724 33.333 5.70 0.00 0.00 2.29
2758 5546 6.214819 TGCTCACCCCTTAAGTATACTCTTTT 59.785 38.462 5.70 0.00 0.00 2.27
2768 5556 2.903926 AGTACTGCTCACCCCTTAAGT 58.096 47.619 0.00 0.00 0.00 2.24
2796 5584 8.131731 TCGTCATCTACTCATCTTGTTCATAAG 58.868 37.037 0.00 0.00 0.00 1.73
2797 5585 7.915923 GTCGTCATCTACTCATCTTGTTCATAA 59.084 37.037 0.00 0.00 0.00 1.90
2798 5586 7.418408 GTCGTCATCTACTCATCTTGTTCATA 58.582 38.462 0.00 0.00 0.00 2.15
2799 5587 6.269315 GTCGTCATCTACTCATCTTGTTCAT 58.731 40.000 0.00 0.00 0.00 2.57
2800 5588 5.393135 GGTCGTCATCTACTCATCTTGTTCA 60.393 44.000 0.00 0.00 0.00 3.18
2801 5589 5.038033 GGTCGTCATCTACTCATCTTGTTC 58.962 45.833 0.00 0.00 0.00 3.18
2802 5590 4.462834 TGGTCGTCATCTACTCATCTTGTT 59.537 41.667 0.00 0.00 0.00 2.83
2803 5591 4.017126 TGGTCGTCATCTACTCATCTTGT 58.983 43.478 0.00 0.00 0.00 3.16
2804 5592 4.355437 GTGGTCGTCATCTACTCATCTTG 58.645 47.826 0.00 0.00 0.00 3.02
2805 5593 3.381908 GGTGGTCGTCATCTACTCATCTT 59.618 47.826 0.00 0.00 0.00 2.40
2806 5594 2.952978 GGTGGTCGTCATCTACTCATCT 59.047 50.000 0.00 0.00 0.00 2.90
2807 5595 2.688446 TGGTGGTCGTCATCTACTCATC 59.312 50.000 0.00 0.00 0.00 2.92
2808 5596 2.735151 TGGTGGTCGTCATCTACTCAT 58.265 47.619 0.00 0.00 0.00 2.90
2809 5597 2.209690 TGGTGGTCGTCATCTACTCA 57.790 50.000 0.00 0.00 0.00 3.41
2810 5598 3.587797 TTTGGTGGTCGTCATCTACTC 57.412 47.619 0.00 0.00 0.00 2.59
2811 5599 4.553330 ATTTTGGTGGTCGTCATCTACT 57.447 40.909 0.00 0.00 0.00 2.57
2812 5600 6.920569 ATAATTTTGGTGGTCGTCATCTAC 57.079 37.500 0.00 0.00 0.00 2.59
2813 5601 8.479689 TCTTATAATTTTGGTGGTCGTCATCTA 58.520 33.333 0.00 0.00 0.00 1.98
2814 5602 7.280205 GTCTTATAATTTTGGTGGTCGTCATCT 59.720 37.037 0.00 0.00 0.00 2.90
2815 5603 7.407337 GTCTTATAATTTTGGTGGTCGTCATC 58.593 38.462 0.00 0.00 0.00 2.92
2816 5604 6.317893 GGTCTTATAATTTTGGTGGTCGTCAT 59.682 38.462 0.00 0.00 0.00 3.06
2817 5605 5.644636 GGTCTTATAATTTTGGTGGTCGTCA 59.355 40.000 0.00 0.00 0.00 4.35
2818 5606 5.878669 AGGTCTTATAATTTTGGTGGTCGTC 59.121 40.000 0.00 0.00 0.00 4.20
2819 5607 5.812286 AGGTCTTATAATTTTGGTGGTCGT 58.188 37.500 0.00 0.00 0.00 4.34
2820 5608 6.753107 AAGGTCTTATAATTTTGGTGGTCG 57.247 37.500 0.00 0.00 0.00 4.79
2840 5628 2.094026 GCCTTCCATTGCCTAACAAAGG 60.094 50.000 0.00 0.00 46.44 3.11
2841 5629 2.827921 AGCCTTCCATTGCCTAACAAAG 59.172 45.455 0.00 0.00 42.86 2.77
2854 5642 6.723298 TTTTACTTCATCAAAAGCCTTCCA 57.277 33.333 0.00 0.00 0.00 3.53
2855 5643 8.523658 ACTATTTTACTTCATCAAAAGCCTTCC 58.476 33.333 0.00 0.00 0.00 3.46
2899 5687 1.274703 GCCTCTCCTGGTTCCATCCA 61.275 60.000 0.00 0.00 36.00 3.41
2905 5693 0.676151 CTTGCAGCCTCTCCTGGTTC 60.676 60.000 0.00 0.00 33.44 3.62
2980 5769 0.523072 GAAAGCACCATGTGTCGCAT 59.477 50.000 0.00 0.00 38.60 4.73
2981 5770 0.817229 TGAAAGCACCATGTGTCGCA 60.817 50.000 0.00 0.00 35.75 5.10
2987 5776 1.340088 TGGCAATGAAAGCACCATGT 58.660 45.000 0.00 0.00 0.00 3.21
3001 5790 8.887717 GCACACCAAAATATTAAATAATGGCAA 58.112 29.630 0.00 0.00 0.00 4.52
3003 5792 7.497249 TGGCACACCAAAATATTAAATAATGGC 59.503 33.333 0.00 0.00 45.37 4.40
3004 5793 8.954950 TGGCACACCAAAATATTAAATAATGG 57.045 30.769 0.00 0.00 45.37 3.16
3031 5820 4.849810 TGAAGAAAGAGGGAATTACCAGGA 59.150 41.667 10.06 0.00 41.20 3.86
3037 5826 7.280205 GCGATAAACTGAAGAAAGAGGGAATTA 59.720 37.037 0.00 0.00 0.00 1.40
3046 5835 4.973396 TGCATGCGATAAACTGAAGAAAG 58.027 39.130 14.09 0.00 0.00 2.62
3047 5836 5.369685 TTGCATGCGATAAACTGAAGAAA 57.630 34.783 14.09 0.00 0.00 2.52
3048 5837 5.334319 CATTGCATGCGATAAACTGAAGAA 58.666 37.500 20.15 0.23 0.00 2.52
3049 5838 4.912214 CATTGCATGCGATAAACTGAAGA 58.088 39.130 20.15 0.00 0.00 2.87
3074 5863 4.625311 CGCACAGAAAGAAAAACAAAGGTT 59.375 37.500 0.00 0.00 39.43 3.50
3081 5870 3.065019 TGAGCGCACAGAAAGAAAAAC 57.935 42.857 11.47 0.00 0.00 2.43
3082 5871 3.550639 CCATGAGCGCACAGAAAGAAAAA 60.551 43.478 14.07 0.00 0.00 1.94
3100 5889 4.392047 TGCCTAATAGAATCAGTGCCATG 58.608 43.478 0.00 0.00 0.00 3.66
3101 5890 4.712051 TGCCTAATAGAATCAGTGCCAT 57.288 40.909 0.00 0.00 0.00 4.40
3102 5891 4.712051 ATGCCTAATAGAATCAGTGCCA 57.288 40.909 0.00 0.00 0.00 4.92
3103 5892 6.936900 TCTAAATGCCTAATAGAATCAGTGCC 59.063 38.462 0.00 0.00 0.00 5.01
3104 5893 7.969536 TCTAAATGCCTAATAGAATCAGTGC 57.030 36.000 0.00 0.00 0.00 4.40
3106 5895 9.553064 CTGTTCTAAATGCCTAATAGAATCAGT 57.447 33.333 0.00 0.00 37.81 3.41
3107 5896 9.770097 TCTGTTCTAAATGCCTAATAGAATCAG 57.230 33.333 0.00 0.00 37.81 2.90
3110 5899 9.905713 TGTTCTGTTCTAAATGCCTAATAGAAT 57.094 29.630 0.00 0.00 37.81 2.40
3111 5900 9.162764 GTGTTCTGTTCTAAATGCCTAATAGAA 57.837 33.333 0.00 0.00 34.26 2.10
3115 5917 7.148018 CCATGTGTTCTGTTCTAAATGCCTAAT 60.148 37.037 0.00 0.00 0.00 1.73
3117 5919 5.647658 CCATGTGTTCTGTTCTAAATGCCTA 59.352 40.000 0.00 0.00 0.00 3.93
3129 5931 8.950210 CAGATTTACTTTATCCATGTGTTCTGT 58.050 33.333 0.00 0.00 0.00 3.41
3132 5934 7.761409 TGCAGATTTACTTTATCCATGTGTTC 58.239 34.615 0.00 0.00 0.00 3.18
3139 5941 5.945784 ACTGCTTGCAGATTTACTTTATCCA 59.054 36.000 26.71 0.00 0.00 3.41
3145 5947 5.242393 ACAATGACTGCTTGCAGATTTACTT 59.758 36.000 26.71 4.60 0.00 2.24
3147 5949 5.051891 ACAATGACTGCTTGCAGATTTAC 57.948 39.130 26.71 13.10 0.00 2.01
3152 5954 2.031769 CGAAACAATGACTGCTTGCAGA 60.032 45.455 26.71 7.95 0.00 4.26
3153 5955 2.287188 ACGAAACAATGACTGCTTGCAG 60.287 45.455 19.62 19.62 0.00 4.41
3157 5959 4.814234 TCAACTACGAAACAATGACTGCTT 59.186 37.500 0.00 0.00 0.00 3.91
3160 5962 6.466308 TGATCAACTACGAAACAATGACTG 57.534 37.500 0.00 0.00 0.00 3.51
3178 5980 8.093927 TGTGTATTCAAGTATGACTGTTGATCA 58.906 33.333 0.00 0.00 34.61 2.92
3182 5984 7.387673 TCCTTGTGTATTCAAGTATGACTGTTG 59.612 37.037 5.86 0.00 42.01 3.33
3199 6001 8.923270 TGTCATCATCATTATAGTCCTTGTGTA 58.077 33.333 0.00 0.00 0.00 2.90
3237 6043 3.106827 TGGACTACATCTGCAGGAATCA 58.893 45.455 15.13 0.00 0.00 2.57
3243 6049 2.391616 TGCTTGGACTACATCTGCAG 57.608 50.000 7.63 7.63 0.00 4.41
3336 6142 3.372025 GGAACCTATCCTTGGCATCAACT 60.372 47.826 0.00 0.00 45.56 3.16
3390 6196 2.654863 CAGAACAACCAACCTGGAAGT 58.345 47.619 0.00 0.00 40.96 3.01
3391 6197 1.338020 GCAGAACAACCAACCTGGAAG 59.662 52.381 0.00 0.00 40.96 3.46
3416 6222 5.105513 ACCTTTCCGTTTGAACTTTGACAAT 60.106 36.000 0.00 0.00 31.05 2.71
3430 6236 0.106149 AGCTCGACAACCTTTCCGTT 59.894 50.000 0.00 0.00 0.00 4.44
3432 6238 0.038159 AGAGCTCGACAACCTTTCCG 60.038 55.000 8.37 0.00 0.00 4.30
3444 6250 2.356382 CCAAGTACCTAGTGAGAGCTCG 59.644 54.545 8.37 0.00 0.00 5.03
3447 6253 4.246458 CAAACCAAGTACCTAGTGAGAGC 58.754 47.826 0.00 0.00 0.00 4.09
3496 6302 9.653287 AGATGAGTTCAATATTACGTGAAAAGA 57.347 29.630 0.00 0.00 35.60 2.52
3527 6333 7.443302 AGATGACTTGAATCTGGAAGGAATA 57.557 36.000 0.00 0.00 33.08 1.75
3528 6334 6.324601 AGATGACTTGAATCTGGAAGGAAT 57.675 37.500 0.00 0.00 33.08 3.01
3529 6335 5.768980 AGATGACTTGAATCTGGAAGGAA 57.231 39.130 0.00 0.00 33.08 3.36
3571 6377 6.092396 CACTCATCTTCTTTCAGTGAGATTGG 59.908 42.308 7.59 0.00 38.81 3.16
3579 6385 5.431765 ACACAACACTCATCTTCTTTCAGT 58.568 37.500 0.00 0.00 0.00 3.41
3592 6398 0.944386 ATGCCACGAACACAACACTC 59.056 50.000 0.00 0.00 0.00 3.51
3604 6410 6.206634 ACCATGGTAATAAAATCTATGCCACG 59.793 38.462 18.10 0.00 0.00 4.94
3606 6412 7.015098 CCAACCATGGTAATAAAATCTATGCCA 59.985 37.037 20.12 0.00 42.18 4.92
3646 6452 3.586618 AGGGAAGGAGAATGATAGATGGC 59.413 47.826 0.00 0.00 0.00 4.40
3663 6469 0.254178 GATGCTCTGGCTGAAGGGAA 59.746 55.000 0.00 0.00 39.59 3.97
3728 6534 0.238289 GAAATGCGACCACACCACAG 59.762 55.000 0.00 0.00 0.00 3.66
3729 6535 0.179032 AGAAATGCGACCACACCACA 60.179 50.000 0.00 0.00 0.00 4.17
3730 6536 1.803334 TAGAAATGCGACCACACCAC 58.197 50.000 0.00 0.00 0.00 4.16
3756 6562 9.471084 CCGGAATTAGATTTTTAACACAACTTT 57.529 29.630 0.00 0.00 0.00 2.66
3785 6592 9.499369 TGAAGGATTGGATTTCCCATTTAATAA 57.501 29.630 0.00 0.00 46.10 1.40
3901 6709 1.535015 GCAACGCTCTAGAGTAGCTGG 60.535 57.143 20.75 7.58 37.85 4.85
3921 6729 1.867233 CCTGGTTTCAGAACAGACACG 59.133 52.381 2.91 0.00 43.49 4.49
3933 6741 2.820845 AACAAGGCCACCTGGTTTC 58.179 52.632 5.01 0.00 44.71 2.78
3942 6750 1.118838 CCCTGAACAAAACAAGGCCA 58.881 50.000 5.01 0.00 0.00 5.36
4019 6827 5.643379 AAACAAGAAGAGTTGTCAGCAAA 57.357 34.783 0.00 0.00 39.82 3.68
4022 6830 5.235305 TGAAAACAAGAAGAGTTGTCAGC 57.765 39.130 0.00 0.00 39.82 4.26
4042 6850 9.366216 GTCATGTCATAAACGCCTATAATATGA 57.634 33.333 0.00 0.00 32.23 2.15
4048 6856 6.073276 GCATTGTCATGTCATAAACGCCTATA 60.073 38.462 0.00 0.00 32.28 1.31
4049 6857 5.277974 GCATTGTCATGTCATAAACGCCTAT 60.278 40.000 0.00 0.00 32.28 2.57
4121 6929 7.083062 AGAAATATGAATAGGTGCCATCAGA 57.917 36.000 0.00 0.00 0.00 3.27
4150 6958 8.861086 TGAAAGAGTTCTCTTACAGTGTCTAAT 58.139 33.333 14.29 0.00 34.60 1.73
4153 6961 6.716934 TGAAAGAGTTCTCTTACAGTGTCT 57.283 37.500 14.29 0.00 34.60 3.41
4220 7028 7.829378 ACTGTTCAAAGTAACCTTCGATATC 57.171 36.000 0.00 0.00 0.00 1.63
4225 7033 5.333111 GCACTACTGTTCAAAGTAACCTTCG 60.333 44.000 0.00 0.00 32.35 3.79
4246 7054 1.084370 GCTACCGACTCATGGTGCAC 61.084 60.000 8.80 8.80 40.73 4.57
4260 7068 2.185494 GCCAGATGCAGCTGCTACC 61.185 63.158 36.61 24.64 42.66 3.18
4283 7091 2.408271 TCCTGTGCATGGACATCTTC 57.592 50.000 21.05 0.00 0.00 2.87
4311 7119 6.335777 AGATGAAATGAAATTGGCAACTAGC 58.664 36.000 0.00 0.00 36.10 3.42
4369 7177 7.036220 CCTAACAACAGGTATCTAGAACACAG 58.964 42.308 0.00 0.00 0.00 3.66
4373 7181 6.380560 AGTCCCTAACAACAGGTATCTAGAAC 59.619 42.308 0.00 0.00 33.44 3.01
4383 7191 0.693049 AGGCAGTCCCTAACAACAGG 59.307 55.000 0.00 0.00 44.08 4.00
4400 7208 7.447374 TGTGATACTGGTTTGTTTCAATAGG 57.553 36.000 0.00 0.00 31.73 2.57
4449 7257 3.135895 CCTACTGTGGTGGTAAATAGGGG 59.864 52.174 0.00 0.00 0.00 4.79
4456 7264 2.253610 CTGGACCTACTGTGGTGGTAA 58.746 52.381 6.64 0.00 41.00 2.85
4507 7366 7.658525 TCAACAAATCATGCCTATATGGTTT 57.341 32.000 0.00 0.00 40.92 3.27
4539 7398 6.092944 ACAAAAGATAATGTCGGCGAACATAA 59.907 34.615 12.92 0.00 38.92 1.90
4549 7408 6.421377 TGATCCACACAAAAGATAATGTCG 57.579 37.500 0.00 0.00 0.00 4.35
4664 7524 4.615588 TGAAATTTGGGATTGGAACCAC 57.384 40.909 0.00 0.00 36.27 4.16
4782 7645 7.043125 CGTCTTATAAGCTGTAGACACGTACTA 60.043 40.741 7.67 0.00 37.46 1.82
4784 7647 5.900789 CGTCTTATAAGCTGTAGACACGTAC 59.099 44.000 7.67 0.00 37.46 3.67
4804 7667 2.977914 AGCAAATACATGTGAGCGTCT 58.022 42.857 9.11 0.00 0.00 4.18
4874 7740 3.575256 TGCATGTTCTTGCCATTCTTTCT 59.425 39.130 7.92 0.00 42.06 2.52
4946 7812 0.602905 CGAGGAACCACCAAGTGTCC 60.603 60.000 0.00 0.00 42.04 4.02
4947 7813 0.602905 CCGAGGAACCACCAAGTGTC 60.603 60.000 0.00 0.00 42.04 3.67
4948 7814 1.052124 TCCGAGGAACCACCAAGTGT 61.052 55.000 0.00 0.00 42.04 3.55
4949 7815 0.324943 ATCCGAGGAACCACCAAGTG 59.675 55.000 0.00 0.00 42.04 3.16
4950 7816 0.324943 CATCCGAGGAACCACCAAGT 59.675 55.000 0.00 0.00 42.04 3.16
4951 7817 0.324943 ACATCCGAGGAACCACCAAG 59.675 55.000 0.00 0.00 42.04 3.61
4952 7818 0.036164 CACATCCGAGGAACCACCAA 59.964 55.000 0.00 0.00 42.04 3.67
4953 7819 1.676968 CACATCCGAGGAACCACCA 59.323 57.895 0.00 0.00 42.04 4.17
4954 7820 1.745489 GCACATCCGAGGAACCACC 60.745 63.158 0.00 0.00 39.35 4.61
4983 7849 2.047370 TTCGCGGCAGAGCATTCA 60.047 55.556 6.13 0.00 36.85 2.57
5045 7911 7.558807 ACTGCAGAAATCAAGAATCCATGATTA 59.441 33.333 23.35 0.00 43.54 1.75
5054 7920 4.170292 GCACACTGCAGAAATCAAGAAT 57.830 40.909 23.35 0.00 44.26 2.40
5069 7935 6.537453 ACATCTCTATGTTAGAAGCACACT 57.463 37.500 0.00 0.00 44.07 3.55
5122 7988 1.336440 TGGGTGCAGAAATTTGTCGTG 59.664 47.619 0.00 0.00 0.00 4.35
5177 8043 5.549347 TGCACGGGAAGTACAGTAAATTTA 58.451 37.500 0.00 0.00 0.00 1.40
5187 8053 2.024176 ATGACATGCACGGGAAGTAC 57.976 50.000 0.00 0.00 0.00 2.73
5214 8080 9.961265 CACAAAGAAATATATTGATGCTGTCAT 57.039 29.630 0.00 0.00 36.54 3.06
5241 8107 8.665685 ACTAATAAAATCAGAAAACACGGCTAG 58.334 33.333 0.00 0.00 0.00 3.42
5283 8149 5.221402 TGGTTGAAGCAAAATAATCACTGCA 60.221 36.000 0.00 0.00 37.26 4.41
5359 8225 2.027192 ACATTGACCGAAGCACATAGGT 60.027 45.455 0.00 0.00 40.11 3.08
5486 8356 1.174712 GGCCACAACACACTCTGCAT 61.175 55.000 0.00 0.00 0.00 3.96
5511 8381 4.156556 GGAAGATCTTACATGCACTGCAAA 59.843 41.667 13.13 0.00 43.62 3.68
5525 8395 6.832384 ACAGCAACATTATCATGGAAGATCTT 59.168 34.615 7.95 7.95 34.27 2.40
5532 8402 9.353431 ACATAATTACAGCAACATTATCATGGA 57.647 29.630 0.00 0.00 34.27 3.41
5564 8435 7.286215 TCCACTAGCAAATACTCCTACATAC 57.714 40.000 0.00 0.00 0.00 2.39
5565 8436 7.039011 CCATCCACTAGCAAATACTCCTACATA 60.039 40.741 0.00 0.00 0.00 2.29
5566 8437 6.239714 CCATCCACTAGCAAATACTCCTACAT 60.240 42.308 0.00 0.00 0.00 2.29
5567 8438 5.070446 CCATCCACTAGCAAATACTCCTACA 59.930 44.000 0.00 0.00 0.00 2.74
5568 8439 5.304614 TCCATCCACTAGCAAATACTCCTAC 59.695 44.000 0.00 0.00 0.00 3.18
5569 8440 5.464069 TCCATCCACTAGCAAATACTCCTA 58.536 41.667 0.00 0.00 0.00 2.94
5570 8441 4.298626 TCCATCCACTAGCAAATACTCCT 58.701 43.478 0.00 0.00 0.00 3.69
5632 8819 9.277565 CAACATTAGTACATTACAATGCTTGAC 57.722 33.333 1.84 0.00 40.04 3.18
5644 8831 9.912634 CTTTCAAATCACCAACATTAGTACATT 57.087 29.630 0.00 0.00 0.00 2.71
5645 8832 9.295825 TCTTTCAAATCACCAACATTAGTACAT 57.704 29.630 0.00 0.00 0.00 2.29
5646 8833 8.684386 TCTTTCAAATCACCAACATTAGTACA 57.316 30.769 0.00 0.00 0.00 2.90
5647 8834 9.612620 CTTCTTTCAAATCACCAACATTAGTAC 57.387 33.333 0.00 0.00 0.00 2.73
5648 8835 8.296713 GCTTCTTTCAAATCACCAACATTAGTA 58.703 33.333 0.00 0.00 0.00 1.82
5649 8836 7.147976 GCTTCTTTCAAATCACCAACATTAGT 58.852 34.615 0.00 0.00 0.00 2.24
5650 8837 7.147312 TGCTTCTTTCAAATCACCAACATTAG 58.853 34.615 0.00 0.00 0.00 1.73
5702 8889 3.674997 ACCGTGCTTTGTCTGTTCATAT 58.325 40.909 0.00 0.00 0.00 1.78
5714 8901 1.323412 TGCCAACATTACCGTGCTTT 58.677 45.000 0.00 0.00 0.00 3.51
5751 8938 2.159761 ACGGTGTTATGACGCGAAATTG 60.160 45.455 15.93 0.00 37.15 2.32
5754 8941 1.456544 GAACGGTGTTATGACGCGAAA 59.543 47.619 15.93 0.00 37.15 3.46
5757 8944 0.092351 GTGAACGGTGTTATGACGCG 59.908 55.000 3.53 3.53 37.15 6.01
5811 8998 3.207669 GCTTCGGCCAGCTCCATG 61.208 66.667 7.81 0.00 36.79 3.66
5820 9020 1.992667 GCACTAAATTTTGCTTCGGCC 59.007 47.619 7.47 0.00 40.91 6.13
5832 9032 6.458232 TGTTTGTTTGTGGTAGCACTAAAT 57.542 33.333 24.35 0.00 0.00 1.40
5839 9039 3.851098 TGGTTTGTTTGTTTGTGGTAGC 58.149 40.909 0.00 0.00 0.00 3.58
5846 9046 2.932614 TGCGGAATGGTTTGTTTGTTTG 59.067 40.909 0.00 0.00 0.00 2.93
5854 9054 2.739885 TGGAAATGCGGAATGGTTTG 57.260 45.000 0.00 0.00 0.00 2.93
5858 9058 1.755959 TCCAATGGAAATGCGGAATGG 59.244 47.619 0.00 0.00 0.00 3.16
5863 9063 1.226660 GCGTCCAATGGAAATGCGG 60.227 57.895 2.31 0.00 31.38 5.69
5866 9066 3.302365 AACTTGCGTCCAATGGAAATG 57.698 42.857 2.31 0.00 31.38 2.32
5873 9073 3.119316 TGTGACAAAAACTTGCGTCCAAT 60.119 39.130 0.00 0.00 0.00 3.16
5882 9082 9.353999 GTACTTTCTTTGATGTGACAAAAACTT 57.646 29.630 0.00 0.00 38.90 2.66
5894 9094 1.202031 GCGCCCGTACTTTCTTTGATG 60.202 52.381 0.00 0.00 0.00 3.07
5897 9097 0.165944 CAGCGCCCGTACTTTCTTTG 59.834 55.000 2.29 0.00 0.00 2.77
5898 9098 0.034337 TCAGCGCCCGTACTTTCTTT 59.966 50.000 2.29 0.00 0.00 2.52
5904 9104 2.857744 GCCTATCAGCGCCCGTACT 61.858 63.158 2.29 0.00 0.00 2.73
5905 9105 2.355956 GCCTATCAGCGCCCGTAC 60.356 66.667 2.29 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.