Multiple sequence alignment - TraesCS7B01G102600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G102600 chr7B 100.000 3588 0 0 1 3588 117021400 117017813 0.000000e+00 6626.0
1 TraesCS7B01G102600 chr7B 93.701 127 8 0 1154 1280 188973234 188973108 1.310000e-44 191.0
2 TraesCS7B01G102600 chr7B 95.763 118 5 0 1155 1272 644912865 644912748 1.310000e-44 191.0
3 TraesCS7B01G102600 chr7D 93.226 2111 115 10 1269 3364 154644165 154646262 0.000000e+00 3081.0
4 TraesCS7B01G102600 chr7D 94.521 365 12 5 168 528 154643335 154643695 1.130000e-154 556.0
5 TraesCS7B01G102600 chr7D 90.083 363 15 12 168 528 4653674 4653331 5.460000e-123 451.0
6 TraesCS7B01G102600 chr7D 96.642 268 7 2 892 1158 154643903 154644169 9.140000e-121 444.0
7 TraesCS7B01G102600 chr7D 97.945 146 3 0 3 148 154643204 154643349 1.650000e-63 254.0
8 TraesCS7B01G102600 chr7D 83.162 291 28 4 3085 3364 154646337 154646617 2.770000e-61 246.0
9 TraesCS7B01G102600 chr7D 96.552 145 5 0 3 147 4653805 4653661 1.290000e-59 241.0
10 TraesCS7B01G102600 chr7D 82.996 247 21 10 535 765 154643666 154643907 1.690000e-48 204.0
11 TraesCS7B01G102600 chr7D 96.226 53 2 0 538 590 4653357 4653305 1.770000e-13 87.9
12 TraesCS7B01G102600 chr7A 93.565 1989 107 11 1268 3244 156567343 156565364 0.000000e+00 2944.0
13 TraesCS7B01G102600 chr7A 94.485 272 10 2 892 1158 156567609 156567338 7.170000e-112 414.0
14 TraesCS7B01G102600 chr7A 89.177 231 25 0 1557 1787 156561944 156561714 4.530000e-74 289.0
15 TraesCS7B01G102600 chr7A 89.720 107 11 0 1811 1917 156560600 156560494 1.740000e-28 137.0
16 TraesCS7B01G102600 chr6D 93.716 366 14 6 168 528 71122162 71122523 1.130000e-149 540.0
17 TraesCS7B01G102600 chr6D 92.568 148 7 1 1 148 71122033 71122176 3.630000e-50 209.0
18 TraesCS7B01G102600 chr6D 79.675 123 21 4 535 657 71122494 71122612 6.380000e-13 86.1
19 TraesCS7B01G102600 chr5D 90.083 363 15 9 168 528 514940492 514940835 5.460000e-123 451.0
20 TraesCS7B01G102600 chr5D 89.503 362 17 9 168 527 438433928 438433586 4.250000e-119 438.0
21 TraesCS7B01G102600 chr5D 95.862 145 6 0 3 147 514940361 514940505 5.990000e-58 235.0
22 TraesCS7B01G102600 chr5D 95.172 145 7 0 3 147 438434059 438433915 2.790000e-56 230.0
23 TraesCS7B01G102600 chr5D 95.349 129 6 0 766 894 312068998 312069126 4.700000e-49 206.0
24 TraesCS7B01G102600 chr5D 93.443 61 4 0 535 595 514940806 514940866 1.370000e-14 91.6
25 TraesCS7B01G102600 chr6B 86.264 364 19 7 168 528 145885522 145885857 2.040000e-97 366.0
26 TraesCS7B01G102600 chr6B 96.269 134 5 0 762 895 68916429 68916296 1.680000e-53 220.0
27 TraesCS7B01G102600 chr6B 92.208 154 5 2 1 148 145885384 145885536 1.010000e-50 211.0
28 TraesCS7B01G102600 chr6B 94.030 134 7 1 762 895 82332880 82333012 6.070000e-48 202.0
29 TraesCS7B01G102600 chr6B 94.030 134 7 1 762 895 82424264 82424396 6.070000e-48 202.0
30 TraesCS7B01G102600 chr6B 96.581 117 4 0 1155 1271 43283983 43284099 1.020000e-45 195.0
31 TraesCS7B01G102600 chr6B 95.726 117 5 0 1155 1271 35636973 35636857 4.730000e-44 189.0
32 TraesCS7B01G102600 chr6B 84.375 128 8 4 21 148 700666669 700666554 8.140000e-22 115.0
33 TraesCS7B01G102600 chr6B 96.774 62 1 1 535 595 145885828 145885889 6.340000e-18 102.0
34 TraesCS7B01G102600 chr6B 96.429 56 2 0 535 590 145885930 145885985 3.810000e-15 93.5
35 TraesCS7B01G102600 chr5A 84.890 364 34 11 168 528 13507319 13507664 7.370000e-92 348.0
36 TraesCS7B01G102600 chr5A 91.892 148 12 0 1 148 13507186 13507333 1.310000e-49 207.0
37 TraesCS7B01G102600 chr3A 83.069 378 20 15 168 528 588948975 588949325 1.620000e-78 303.0
38 TraesCS7B01G102600 chr3A 93.548 62 3 1 535 595 588949296 588949357 1.370000e-14 91.6
39 TraesCS7B01G102600 chr4A 100.000 129 0 0 766 894 690934521 690934393 4.630000e-59 239.0
40 TraesCS7B01G102600 chr4A 96.875 128 3 1 766 893 12486982 12486856 2.810000e-51 213.0
41 TraesCS7B01G102600 chr1A 84.436 257 21 8 168 423 4639325 4639563 5.990000e-58 235.0
42 TraesCS7B01G102600 chr1A 98.438 128 2 0 763 890 49298217 49298344 3.600000e-55 226.0
43 TraesCS7B01G102600 chr1B 97.122 139 1 3 762 898 599226495 599226358 7.750000e-57 231.0
44 TraesCS7B01G102600 chr1B 97.674 129 3 0 762 890 249207326 249207454 4.660000e-54 222.0
45 TraesCS7B01G102600 chr1B 82.883 111 17 2 3363 3471 589761467 589761577 8.200000e-17 99.0
46 TraesCS7B01G102600 chr5B 85.088 228 11 9 168 388 15073564 15073353 1.010000e-50 211.0
47 TraesCS7B01G102600 chr5B 85.022 227 13 9 168 388 15127591 15127380 1.010000e-50 211.0
48 TraesCS7B01G102600 chr5B 95.798 119 4 1 1153 1271 547368738 547368621 1.310000e-44 191.0
49 TraesCS7B01G102600 chr3B 95.161 124 6 0 1148 1271 489684888 489685011 2.830000e-46 196.0
50 TraesCS7B01G102600 chr3B 81.116 233 33 10 3361 3588 351986730 351986504 3.680000e-40 176.0
51 TraesCS7B01G102600 chr4D 93.750 128 8 0 773 900 508745608 508745735 3.660000e-45 193.0
52 TraesCS7B01G102600 chr2B 95.763 118 5 0 1155 1272 670298049 670297932 1.310000e-44 191.0
53 TraesCS7B01G102600 chr2B 81.513 238 37 6 3357 3588 602257353 602257589 4.730000e-44 189.0
54 TraesCS7B01G102600 chr2B 80.537 149 11 8 538 669 24922019 24921872 8.200000e-17 99.0
55 TraesCS7B01G102600 chr2A 93.701 127 8 0 1146 1272 389220935 389220809 1.310000e-44 191.0
56 TraesCS7B01G102600 chr4B 93.023 129 7 2 1146 1273 15260499 15260626 1.700000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G102600 chr7B 117017813 117021400 3587 True 6626.000000 6626 100.000000 1 3588 1 chr7B.!!$R1 3587
1 TraesCS7B01G102600 chr7D 154643204 154646617 3413 False 797.500000 3081 91.415333 3 3364 6 chr7D.!!$F1 3361
2 TraesCS7B01G102600 chr7D 4653305 4653805 500 True 259.966667 451 94.287000 3 590 3 chr7D.!!$R1 587
3 TraesCS7B01G102600 chr7A 156560494 156567609 7115 True 946.000000 2944 91.736750 892 3244 4 chr7A.!!$R1 2352
4 TraesCS7B01G102600 chr6D 71122033 71122612 579 False 278.366667 540 88.653000 1 657 3 chr6D.!!$F1 656
5 TraesCS7B01G102600 chr5D 514940361 514940866 505 False 259.200000 451 93.129333 3 595 3 chr5D.!!$F2 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
827 850 0.250901 GTGACTGGCAACTCCACCAT 60.251 55.0 0.0 0.0 40.72 3.55 F
1168 1197 0.172803 CTTTGTACTCCCTCCGTCCG 59.827 60.0 0.0 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2510 2541 0.318869 TGTTCGGCGACATTGTACGT 60.319 50.0 10.16 0.0 0.00 3.57 R
3088 3121 0.321346 GCCAACAAAGGGAATGGGTG 59.679 55.0 0.00 0.0 33.45 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 4.937620 TCTAGTTTCTGCATGGTCATTCAC 59.062 41.667 0.00 0.00 0.00 3.18
133 134 3.599046 GCGAAGGCTGTCATCTTTATG 57.401 47.619 0.00 0.00 35.83 1.90
134 135 2.939103 GCGAAGGCTGTCATCTTTATGT 59.061 45.455 0.00 0.00 33.64 2.29
135 136 3.001736 GCGAAGGCTGTCATCTTTATGTC 59.998 47.826 0.00 0.00 33.64 3.06
136 137 4.183865 CGAAGGCTGTCATCTTTATGTCA 58.816 43.478 0.00 0.00 34.50 3.58
137 138 4.269603 CGAAGGCTGTCATCTTTATGTCAG 59.730 45.833 7.85 7.85 46.05 3.51
141 142 4.768659 CTGTCATCTTTATGTCAGCGAC 57.231 45.455 0.00 2.32 40.63 5.19
142 143 3.521560 TGTCATCTTTATGTCAGCGACC 58.478 45.455 6.30 0.00 34.50 4.79
143 144 3.056179 TGTCATCTTTATGTCAGCGACCA 60.056 43.478 6.30 0.00 34.50 4.02
144 145 3.553511 GTCATCTTTATGTCAGCGACCAG 59.446 47.826 6.30 0.00 34.50 4.00
145 146 3.195610 TCATCTTTATGTCAGCGACCAGT 59.804 43.478 6.30 0.00 34.50 4.00
146 147 3.678056 TCTTTATGTCAGCGACCAGTT 57.322 42.857 6.30 0.00 0.00 3.16
147 148 3.585862 TCTTTATGTCAGCGACCAGTTC 58.414 45.455 6.30 0.00 0.00 3.01
148 149 3.006430 TCTTTATGTCAGCGACCAGTTCA 59.994 43.478 6.30 0.00 0.00 3.18
149 150 3.610040 TTATGTCAGCGACCAGTTCAT 57.390 42.857 6.30 0.00 0.00 2.57
150 151 4.729227 TTATGTCAGCGACCAGTTCATA 57.271 40.909 6.30 0.00 0.00 2.15
151 152 3.827008 ATGTCAGCGACCAGTTCATAT 57.173 42.857 6.30 0.00 0.00 1.78
152 153 3.610040 TGTCAGCGACCAGTTCATATT 57.390 42.857 6.30 0.00 0.00 1.28
153 154 3.521560 TGTCAGCGACCAGTTCATATTC 58.478 45.455 6.30 0.00 0.00 1.75
154 155 3.195610 TGTCAGCGACCAGTTCATATTCT 59.804 43.478 6.30 0.00 0.00 2.40
155 156 3.799420 GTCAGCGACCAGTTCATATTCTC 59.201 47.826 0.00 0.00 0.00 2.87
156 157 3.447229 TCAGCGACCAGTTCATATTCTCA 59.553 43.478 0.00 0.00 0.00 3.27
157 158 4.081697 TCAGCGACCAGTTCATATTCTCAA 60.082 41.667 0.00 0.00 0.00 3.02
158 159 4.631377 CAGCGACCAGTTCATATTCTCAAA 59.369 41.667 0.00 0.00 0.00 2.69
159 160 5.122239 CAGCGACCAGTTCATATTCTCAAAA 59.878 40.000 0.00 0.00 0.00 2.44
160 161 5.705441 AGCGACCAGTTCATATTCTCAAAAA 59.295 36.000 0.00 0.00 0.00 1.94
291 293 3.414700 GGCGACGCACTCACCTTG 61.415 66.667 23.09 0.00 0.00 3.61
316 319 1.775039 TTCGTCGTCTTCGTCGGTGT 61.775 55.000 7.27 0.00 45.17 4.16
458 465 1.168714 GGCAAATGAGAGTGTGGGAC 58.831 55.000 0.00 0.00 0.00 4.46
484 491 5.482908 AGAATTACTGCGTGAGATTTCAGT 58.517 37.500 0.00 0.00 41.93 3.41
485 492 5.578727 AGAATTACTGCGTGAGATTTCAGTC 59.421 40.000 0.00 0.00 40.01 3.51
495 502 3.830178 TGAGATTTCAGTCGAAGGTACCA 59.170 43.478 15.94 0.00 31.28 3.25
498 505 1.629043 TTCAGTCGAAGGTACCAGCT 58.371 50.000 15.94 0.00 0.00 4.24
499 506 0.888619 TCAGTCGAAGGTACCAGCTG 59.111 55.000 15.94 6.78 0.00 4.24
500 507 0.737715 CAGTCGAAGGTACCAGCTGC 60.738 60.000 15.94 1.06 0.00 5.25
501 508 1.805945 GTCGAAGGTACCAGCTGCG 60.806 63.158 15.94 3.93 45.66 5.18
502 509 2.509336 CGAAGGTACCAGCTGCGG 60.509 66.667 15.94 0.00 40.88 5.69
503 510 2.125106 GAAGGTACCAGCTGCGGG 60.125 66.667 17.47 17.47 0.00 6.13
504 511 2.606519 AAGGTACCAGCTGCGGGA 60.607 61.111 25.53 8.61 0.00 5.14
505 512 1.972660 GAAGGTACCAGCTGCGGGAT 61.973 60.000 25.53 11.79 0.00 3.85
506 513 2.203070 GGTACCAGCTGCGGGATG 60.203 66.667 25.53 2.49 0.00 3.51
511 518 4.368391 CAGCTGCGGGATGGATAC 57.632 61.111 0.00 0.00 0.00 2.24
527 534 5.506730 TGGATACATGTGAACTACCCAAA 57.493 39.130 9.11 0.00 46.17 3.28
528 535 6.073447 TGGATACATGTGAACTACCCAAAT 57.927 37.500 9.11 0.00 46.17 2.32
529 536 5.885352 TGGATACATGTGAACTACCCAAATG 59.115 40.000 9.11 0.00 46.17 2.32
530 537 6.119536 GGATACATGTGAACTACCCAAATGA 58.880 40.000 9.11 0.00 33.89 2.57
531 538 6.260936 GGATACATGTGAACTACCCAAATGAG 59.739 42.308 9.11 0.00 33.89 2.90
532 539 5.241403 ACATGTGAACTACCCAAATGAGA 57.759 39.130 0.00 0.00 33.89 3.27
533 540 5.248640 ACATGTGAACTACCCAAATGAGAG 58.751 41.667 0.00 0.00 33.89 3.20
534 541 4.974645 TGTGAACTACCCAAATGAGAGT 57.025 40.909 0.00 0.00 0.00 3.24
535 542 4.641396 TGTGAACTACCCAAATGAGAGTG 58.359 43.478 0.00 0.00 0.00 3.51
536 543 4.102524 TGTGAACTACCCAAATGAGAGTGT 59.897 41.667 0.00 0.00 0.00 3.55
599 606 8.532977 TTACTTAACATACTACCAAAACGTCC 57.467 34.615 0.00 0.00 0.00 4.79
600 607 6.762333 ACTTAACATACTACCAAAACGTCCT 58.238 36.000 0.00 0.00 0.00 3.85
602 609 8.367156 ACTTAACATACTACCAAAACGTCCTTA 58.633 33.333 0.00 0.00 0.00 2.69
603 610 9.206870 CTTAACATACTACCAAAACGTCCTTAA 57.793 33.333 0.00 0.00 0.00 1.85
604 611 9.723601 TTAACATACTACCAAAACGTCCTTAAT 57.276 29.630 0.00 0.00 0.00 1.40
606 613 8.707938 ACATACTACCAAAACGTCCTTAATAC 57.292 34.615 0.00 0.00 0.00 1.89
609 616 7.605410 ACTACCAAAACGTCCTTAATACATG 57.395 36.000 0.00 0.00 0.00 3.21
664 687 3.119388 CCGATGTACCGTAAAAGGTCTCA 60.119 47.826 0.00 0.00 44.68 3.27
669 692 7.437267 CGATGTACCGTAAAAGGTCTCATAAAT 59.563 37.037 0.00 0.00 44.68 1.40
670 693 9.754382 GATGTACCGTAAAAGGTCTCATAAATA 57.246 33.333 0.00 0.00 44.68 1.40
682 705 8.409358 AGGTCTCATAAATAAATTGTATGGCC 57.591 34.615 0.00 0.00 0.00 5.36
683 706 8.004215 AGGTCTCATAAATAAATTGTATGGCCA 58.996 33.333 8.56 8.56 0.00 5.36
684 707 8.806146 GGTCTCATAAATAAATTGTATGGCCAT 58.194 33.333 24.45 24.45 0.00 4.40
744 767 5.568620 ACATAGAAACAACTCCAACCTCT 57.431 39.130 0.00 0.00 0.00 3.69
760 783 1.461127 CCTCTTGTGCAAACTACTCGC 59.539 52.381 0.00 0.00 0.00 5.03
761 784 1.461127 CTCTTGTGCAAACTACTCGCC 59.539 52.381 0.00 0.00 0.00 5.54
762 785 1.070134 TCTTGTGCAAACTACTCGCCT 59.930 47.619 0.00 0.00 0.00 5.52
763 786 2.297880 TCTTGTGCAAACTACTCGCCTA 59.702 45.455 0.00 0.00 0.00 3.93
764 787 3.056107 TCTTGTGCAAACTACTCGCCTAT 60.056 43.478 0.00 0.00 0.00 2.57
765 788 2.616960 TGTGCAAACTACTCGCCTATG 58.383 47.619 0.00 0.00 0.00 2.23
766 789 1.933853 GTGCAAACTACTCGCCTATGG 59.066 52.381 0.00 0.00 0.00 2.74
767 790 0.938008 GCAAACTACTCGCCTATGGC 59.062 55.000 0.00 0.00 46.75 4.40
776 799 2.203209 GCCTATGGCCCTGTTCGG 60.203 66.667 0.00 0.00 44.06 4.30
777 800 3.043999 GCCTATGGCCCTGTTCGGT 62.044 63.158 0.00 0.00 44.06 4.69
778 801 1.692173 GCCTATGGCCCTGTTCGGTA 61.692 60.000 0.00 0.00 44.06 4.02
779 802 0.834612 CCTATGGCCCTGTTCGGTAA 59.165 55.000 0.00 0.00 0.00 2.85
780 803 1.420138 CCTATGGCCCTGTTCGGTAAT 59.580 52.381 0.00 0.00 0.00 1.89
781 804 2.494059 CTATGGCCCTGTTCGGTAATG 58.506 52.381 0.00 0.00 0.00 1.90
782 805 0.916086 ATGGCCCTGTTCGGTAATGA 59.084 50.000 0.00 0.00 0.00 2.57
783 806 0.916086 TGGCCCTGTTCGGTAATGAT 59.084 50.000 0.00 0.00 0.00 2.45
784 807 1.134220 TGGCCCTGTTCGGTAATGATC 60.134 52.381 0.00 0.00 0.00 2.92
785 808 1.594331 GCCCTGTTCGGTAATGATCC 58.406 55.000 0.00 0.00 0.00 3.36
787 810 1.217882 CCTGTTCGGTAATGATCCGC 58.782 55.000 0.00 0.00 46.49 5.54
788 811 1.202533 CCTGTTCGGTAATGATCCGCT 60.203 52.381 0.00 0.00 46.49 5.52
789 812 2.128035 CTGTTCGGTAATGATCCGCTC 58.872 52.381 0.00 0.00 46.49 5.03
790 813 1.202486 TGTTCGGTAATGATCCGCTCC 60.202 52.381 0.00 0.00 46.49 4.70
791 814 0.391597 TTCGGTAATGATCCGCTCCC 59.608 55.000 0.00 0.00 46.49 4.30
792 815 1.372997 CGGTAATGATCCGCTCCCG 60.373 63.158 0.00 0.00 41.48 5.14
818 841 4.329545 GGAGCGGGTGACTGGCAA 62.330 66.667 0.00 0.00 37.13 4.52
819 842 3.050275 GAGCGGGTGACTGGCAAC 61.050 66.667 0.00 0.00 37.13 4.17
820 843 3.537206 GAGCGGGTGACTGGCAACT 62.537 63.158 0.00 0.00 37.13 3.16
821 844 3.050275 GCGGGTGACTGGCAACTC 61.050 66.667 0.00 0.00 37.13 3.01
822 845 2.358737 CGGGTGACTGGCAACTCC 60.359 66.667 0.00 0.00 33.59 3.85
823 846 2.836154 GGGTGACTGGCAACTCCA 59.164 61.111 0.00 0.00 44.18 3.86
824 847 1.600916 GGGTGACTGGCAACTCCAC 60.601 63.158 0.00 7.06 40.72 4.02
825 848 1.600916 GGTGACTGGCAACTCCACC 60.601 63.158 10.17 10.17 40.72 4.61
826 849 1.148273 GTGACTGGCAACTCCACCA 59.852 57.895 0.00 0.00 40.72 4.17
827 850 0.250901 GTGACTGGCAACTCCACCAT 60.251 55.000 0.00 0.00 40.72 3.55
828 851 0.478072 TGACTGGCAACTCCACCATT 59.522 50.000 0.00 0.00 40.72 3.16
829 852 1.133513 TGACTGGCAACTCCACCATTT 60.134 47.619 0.00 0.00 40.72 2.32
830 853 1.963515 GACTGGCAACTCCACCATTTT 59.036 47.619 0.00 0.00 40.72 1.82
831 854 1.688197 ACTGGCAACTCCACCATTTTG 59.312 47.619 0.00 0.00 40.72 2.44
832 855 1.962807 CTGGCAACTCCACCATTTTGA 59.037 47.619 0.00 0.00 40.72 2.69
833 856 1.686052 TGGCAACTCCACCATTTTGAC 59.314 47.619 0.00 0.00 40.72 3.18
834 857 1.000843 GGCAACTCCACCATTTTGACC 59.999 52.381 0.00 0.00 34.01 4.02
835 858 1.963515 GCAACTCCACCATTTTGACCT 59.036 47.619 0.00 0.00 0.00 3.85
836 859 3.153919 GCAACTCCACCATTTTGACCTA 58.846 45.455 0.00 0.00 0.00 3.08
837 860 3.057526 GCAACTCCACCATTTTGACCTAC 60.058 47.826 0.00 0.00 0.00 3.18
838 861 4.141287 CAACTCCACCATTTTGACCTACA 58.859 43.478 0.00 0.00 0.00 2.74
839 862 4.021102 ACTCCACCATTTTGACCTACAG 57.979 45.455 0.00 0.00 0.00 2.74
840 863 2.749621 CTCCACCATTTTGACCTACAGC 59.250 50.000 0.00 0.00 0.00 4.40
841 864 2.375174 TCCACCATTTTGACCTACAGCT 59.625 45.455 0.00 0.00 0.00 4.24
842 865 2.749621 CCACCATTTTGACCTACAGCTC 59.250 50.000 0.00 0.00 0.00 4.09
843 866 2.749621 CACCATTTTGACCTACAGCTCC 59.250 50.000 0.00 0.00 0.00 4.70
844 867 2.009774 CCATTTTGACCTACAGCTCCG 58.990 52.381 0.00 0.00 0.00 4.63
845 868 1.398390 CATTTTGACCTACAGCTCCGC 59.602 52.381 0.00 0.00 0.00 5.54
846 869 0.321298 TTTTGACCTACAGCTCCGCC 60.321 55.000 0.00 0.00 0.00 6.13
847 870 1.476845 TTTGACCTACAGCTCCGCCA 61.477 55.000 0.00 0.00 0.00 5.69
848 871 1.476845 TTGACCTACAGCTCCGCCAA 61.477 55.000 0.00 0.00 0.00 4.52
849 872 1.448013 GACCTACAGCTCCGCCAAC 60.448 63.158 0.00 0.00 0.00 3.77
850 873 1.889530 GACCTACAGCTCCGCCAACT 61.890 60.000 0.00 0.00 0.00 3.16
851 874 1.153549 CCTACAGCTCCGCCAACTC 60.154 63.158 0.00 0.00 0.00 3.01
852 875 1.153549 CTACAGCTCCGCCAACTCC 60.154 63.158 0.00 0.00 0.00 3.85
853 876 2.890847 CTACAGCTCCGCCAACTCCG 62.891 65.000 0.00 0.00 0.00 4.63
857 880 4.821589 CTCCGCCAACTCCGCTCC 62.822 72.222 0.00 0.00 0.00 4.70
871 894 4.154347 CTCCGGGAGCTGTGGAGC 62.154 72.222 11.83 0.00 42.53 4.70
889 912 3.567797 GGAGCGATGCCGAACAGC 61.568 66.667 0.00 0.00 38.22 4.40
982 1009 5.592104 ACCAACGAAACAAATTCTTCCTT 57.408 34.783 0.00 0.00 35.79 3.36
1029 1056 2.221169 GACAGCGATTTCCATATGGCA 58.779 47.619 17.58 2.77 32.39 4.92
1099 1127 8.088365 AGGTATTTGAAAAATTAACTCACAGCC 58.912 33.333 0.00 0.00 0.00 4.85
1105 1134 7.278875 TGAAAAATTAACTCACAGCCCATTTT 58.721 30.769 0.00 0.00 0.00 1.82
1152 1181 1.688735 GCTGCCCTTGTTTCCTTCTTT 59.311 47.619 0.00 0.00 0.00 2.52
1153 1182 2.546584 GCTGCCCTTGTTTCCTTCTTTG 60.547 50.000 0.00 0.00 0.00 2.77
1154 1183 2.695147 CTGCCCTTGTTTCCTTCTTTGT 59.305 45.455 0.00 0.00 0.00 2.83
1155 1184 3.888930 CTGCCCTTGTTTCCTTCTTTGTA 59.111 43.478 0.00 0.00 0.00 2.41
1156 1185 3.634910 TGCCCTTGTTTCCTTCTTTGTAC 59.365 43.478 0.00 0.00 0.00 2.90
1157 1186 3.889538 GCCCTTGTTTCCTTCTTTGTACT 59.110 43.478 0.00 0.00 0.00 2.73
1158 1187 4.023107 GCCCTTGTTTCCTTCTTTGTACTC 60.023 45.833 0.00 0.00 0.00 2.59
1159 1188 4.519350 CCCTTGTTTCCTTCTTTGTACTCC 59.481 45.833 0.00 0.00 0.00 3.85
1160 1189 4.519350 CCTTGTTTCCTTCTTTGTACTCCC 59.481 45.833 0.00 0.00 0.00 4.30
1161 1190 5.377478 CTTGTTTCCTTCTTTGTACTCCCT 58.623 41.667 0.00 0.00 0.00 4.20
1162 1191 4.969484 TGTTTCCTTCTTTGTACTCCCTC 58.031 43.478 0.00 0.00 0.00 4.30
1163 1192 4.202430 TGTTTCCTTCTTTGTACTCCCTCC 60.202 45.833 0.00 0.00 0.00 4.30
1164 1193 2.176889 TCCTTCTTTGTACTCCCTCCG 58.823 52.381 0.00 0.00 0.00 4.63
1165 1194 1.900486 CCTTCTTTGTACTCCCTCCGT 59.100 52.381 0.00 0.00 0.00 4.69
1166 1195 2.094130 CCTTCTTTGTACTCCCTCCGTC 60.094 54.545 0.00 0.00 0.00 4.79
1167 1196 1.553706 TCTTTGTACTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
1168 1197 0.172803 CTTTGTACTCCCTCCGTCCG 59.827 60.000 0.00 0.00 0.00 4.79
1169 1198 0.540365 TTTGTACTCCCTCCGTCCGT 60.540 55.000 0.00 0.00 0.00 4.69
1170 1199 0.327924 TTGTACTCCCTCCGTCCGTA 59.672 55.000 0.00 0.00 0.00 4.02
1171 1200 0.327924 TGTACTCCCTCCGTCCGTAA 59.672 55.000 0.00 0.00 0.00 3.18
1172 1201 1.271871 TGTACTCCCTCCGTCCGTAAA 60.272 52.381 0.00 0.00 0.00 2.01
1173 1202 2.027385 GTACTCCCTCCGTCCGTAAAT 58.973 52.381 0.00 0.00 0.00 1.40
1174 1203 2.442236 ACTCCCTCCGTCCGTAAATA 57.558 50.000 0.00 0.00 0.00 1.40
1175 1204 2.027385 ACTCCCTCCGTCCGTAAATAC 58.973 52.381 0.00 0.00 0.00 1.89
1176 1205 2.305009 CTCCCTCCGTCCGTAAATACT 58.695 52.381 0.00 0.00 0.00 2.12
1177 1206 2.692041 CTCCCTCCGTCCGTAAATACTT 59.308 50.000 0.00 0.00 0.00 2.24
1178 1207 2.428171 TCCCTCCGTCCGTAAATACTTG 59.572 50.000 0.00 0.00 0.00 3.16
1179 1208 2.167075 CCCTCCGTCCGTAAATACTTGT 59.833 50.000 0.00 0.00 0.00 3.16
1180 1209 3.442100 CCTCCGTCCGTAAATACTTGTC 58.558 50.000 0.00 0.00 0.00 3.18
1181 1210 3.103738 CTCCGTCCGTAAATACTTGTCG 58.896 50.000 0.00 0.00 0.00 4.35
1182 1211 2.159393 TCCGTCCGTAAATACTTGTCGG 60.159 50.000 0.00 0.00 42.12 4.79
1183 1212 2.159393 CCGTCCGTAAATACTTGTCGGA 60.159 50.000 0.00 0.00 46.14 4.55
1187 1216 5.389859 TCCGTAAATACTTGTCGGAGAAA 57.610 39.130 0.00 0.00 44.04 2.52
1188 1217 5.969423 TCCGTAAATACTTGTCGGAGAAAT 58.031 37.500 0.00 0.00 44.04 2.17
1189 1218 5.808540 TCCGTAAATACTTGTCGGAGAAATG 59.191 40.000 0.00 0.00 44.04 2.32
1190 1219 5.006358 CCGTAAATACTTGTCGGAGAAATGG 59.994 44.000 0.00 0.00 43.22 3.16
1191 1220 5.808540 CGTAAATACTTGTCGGAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
1192 1221 6.479001 CGTAAATACTTGTCGGAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
1193 1222 6.683974 AAATACTTGTCGGAGAAATGGATG 57.316 37.500 0.00 0.00 39.69 3.51
1194 1223 3.703001 ACTTGTCGGAGAAATGGATGT 57.297 42.857 0.00 0.00 39.69 3.06
1195 1224 4.819105 ACTTGTCGGAGAAATGGATGTA 57.181 40.909 0.00 0.00 39.69 2.29
1196 1225 5.359194 ACTTGTCGGAGAAATGGATGTAT 57.641 39.130 0.00 0.00 39.69 2.29
1197 1226 5.360591 ACTTGTCGGAGAAATGGATGTATC 58.639 41.667 0.00 0.00 39.69 2.24
1198 1227 5.129485 ACTTGTCGGAGAAATGGATGTATCT 59.871 40.000 0.00 0.00 39.69 1.98
1199 1228 6.323996 ACTTGTCGGAGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 39.69 1.98
1200 1229 6.332735 TGTCGGAGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 39.69 2.43
1201 1230 6.068670 TGTCGGAGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 39.69 2.43
1202 1231 6.016192 TGTCGGAGAAATGGATGTATCTAGAC 60.016 42.308 0.00 0.00 39.69 2.59
1203 1232 6.016192 GTCGGAGAAATGGATGTATCTAGACA 60.016 42.308 0.00 0.00 39.69 3.41
1204 1233 6.721668 TCGGAGAAATGGATGTATCTAGACAT 59.278 38.462 0.00 0.00 42.82 3.06
1205 1234 7.888546 TCGGAGAAATGGATGTATCTAGACATA 59.111 37.037 0.00 0.00 40.18 2.29
1206 1235 8.690884 CGGAGAAATGGATGTATCTAGACATAT 58.309 37.037 0.00 0.00 40.18 1.78
1207 1236 9.814899 GGAGAAATGGATGTATCTAGACATATG 57.185 37.037 0.00 0.00 40.18 1.78
1260 1289 8.436156 GATTTCTTCGACAAGTAATTTTGGAC 57.564 34.615 0.00 0.00 31.62 4.02
1261 1290 5.585500 TCTTCGACAAGTAATTTTGGACG 57.415 39.130 0.00 0.00 35.22 4.79
1262 1291 4.449743 TCTTCGACAAGTAATTTTGGACGG 59.550 41.667 0.00 0.00 34.92 4.79
1263 1292 3.992643 TCGACAAGTAATTTTGGACGGA 58.007 40.909 9.84 0.00 34.92 4.69
1264 1293 3.991773 TCGACAAGTAATTTTGGACGGAG 59.008 43.478 9.84 0.00 34.92 4.63
1265 1294 3.124636 CGACAAGTAATTTTGGACGGAGG 59.875 47.826 0.00 0.00 32.62 4.30
1266 1295 3.418047 ACAAGTAATTTTGGACGGAGGG 58.582 45.455 0.00 0.00 32.32 4.30
1274 1303 1.263356 TTGGACGGAGGGAGTACTTG 58.737 55.000 0.00 0.00 0.00 3.16
1298 1327 0.389817 CGACATTTCTGGCTCACCGA 60.390 55.000 0.00 0.00 39.70 4.69
1304 1333 1.471829 TTCTGGCTCACCGAAGCTGA 61.472 55.000 0.00 2.11 42.13 4.26
1479 1508 1.939934 TGCTCTTCAGGTGAAAACACG 59.060 47.619 0.00 0.00 33.07 4.49
1503 1532 4.641396 TCATCTTTGTCTCCAACGTGATT 58.359 39.130 0.00 0.00 0.00 2.57
1516 1545 4.413969 CAACGTGATTGAAGCAATATGCA 58.586 39.130 5.01 0.00 42.97 3.96
1677 1706 6.187682 AGCACTACCACCTTTTTATATTGCT 58.812 36.000 0.00 0.00 29.79 3.91
1716 1745 0.668535 ACACCAAGCTTTTTCCTCGC 59.331 50.000 0.00 0.00 0.00 5.03
1746 1775 7.332926 AGTGTTCATCTGTTTCACTCATCATAC 59.667 37.037 0.00 0.00 34.87 2.39
1996 2025 4.119862 GTTGTTCCTCAAGCTGCGATATA 58.880 43.478 0.00 0.00 36.66 0.86
2003 2032 4.084849 CCTCAAGCTGCGATATAAAGAACG 60.085 45.833 0.00 0.00 0.00 3.95
2013 2042 0.611714 ATAAAGAACGGGTGCTCGGT 59.388 50.000 0.00 0.00 0.00 4.69
2026 2055 1.280710 TGCTCGGTGGACAAATGGTAT 59.719 47.619 0.00 0.00 0.00 2.73
2037 2066 6.808212 GTGGACAAATGGTATTGACATTTCTG 59.192 38.462 0.00 0.00 44.29 3.02
2055 2084 3.260205 TCTGGGGAGAAAAACAGAGGAT 58.740 45.455 0.00 0.00 35.24 3.24
2097 2126 4.067896 ACCAGCTCTATGGATTAATTGCG 58.932 43.478 0.00 0.00 43.57 4.85
2153 2182 9.135189 ACACACCGGTATATCTTTAGTACAATA 57.865 33.333 6.87 0.00 0.00 1.90
2326 2357 5.183904 GGTGATCAAGCAAAGTGGACTATTT 59.816 40.000 0.00 0.00 0.00 1.40
2389 2420 2.548057 TCATGACAACTCGGAAAGCAAC 59.452 45.455 0.00 0.00 0.00 4.17
2397 2428 1.438710 CGGAAAGCAACGAAGTGCG 60.439 57.895 0.00 0.00 45.00 5.34
2401 2432 1.841663 AAAGCAACGAAGTGCGCGAT 61.842 50.000 12.10 0.00 45.00 4.58
2431 2462 0.243365 GCGGCATGAATGTGTCCAAA 59.757 50.000 0.00 0.00 0.00 3.28
2483 2514 5.076182 TCACAAGCCATTTTGGTGAATCTA 58.924 37.500 0.00 0.00 40.46 1.98
2493 2524 3.885724 TGGTGAATCTATGCTCGACAA 57.114 42.857 0.00 0.00 0.00 3.18
2494 2525 3.785486 TGGTGAATCTATGCTCGACAAG 58.215 45.455 0.00 0.00 0.00 3.16
2510 2541 3.184379 CGACAAGCTCTTCGACAAATTCA 59.816 43.478 10.65 0.00 37.43 2.57
2524 2555 3.160545 CAAATTCACGTACAATGTCGCC 58.839 45.455 0.00 0.00 0.00 5.54
2564 2595 7.340487 GGGAGAAGACAAAGTATTCCATCATTT 59.660 37.037 1.32 0.00 34.74 2.32
2642 2673 9.790389 ACTTGTTTTATCTCTCTATGAACGTAG 57.210 33.333 0.00 0.00 0.00 3.51
2676 2707 5.589050 GGGTCTTGTTTAGTTGTTGACTCTT 59.411 40.000 0.00 0.00 39.86 2.85
2817 2850 9.167311 CCTCCTTACCAAATTATAGTGCATATC 57.833 37.037 0.00 0.00 0.00 1.63
2837 2870 9.630098 GCATATCAAATTTGGTATAGGTCAATG 57.370 33.333 20.85 11.60 32.91 2.82
3057 3090 6.791887 TCTCTTCTTGCAGTTAGACAATTG 57.208 37.500 3.24 3.24 0.00 2.32
3111 3144 1.629861 CCATTCCCTTTGTTGGCCAAT 59.370 47.619 23.66 0.00 31.81 3.16
3158 3200 2.936498 GCTACGTAGACATGCAACCAAT 59.064 45.455 26.53 0.00 0.00 3.16
3166 3208 4.827692 AGACATGCAACCAATAACTACGA 58.172 39.130 0.00 0.00 0.00 3.43
3227 3269 4.150994 GTGCTCAACCAAACGGGA 57.849 55.556 0.00 0.00 41.15 5.14
3230 3272 0.821711 TGCTCAACCAAACGGGAAGG 60.822 55.000 0.00 0.00 41.15 3.46
3231 3273 0.536460 GCTCAACCAAACGGGAAGGA 60.536 55.000 0.00 0.00 41.15 3.36
3244 3286 2.092646 CGGGAAGGAAGAGAGAGAGAGA 60.093 54.545 0.00 0.00 0.00 3.10
3245 3287 3.555966 GGGAAGGAAGAGAGAGAGAGAG 58.444 54.545 0.00 0.00 0.00 3.20
3246 3288 3.202151 GGGAAGGAAGAGAGAGAGAGAGA 59.798 52.174 0.00 0.00 0.00 3.10
3247 3289 4.455606 GGAAGGAAGAGAGAGAGAGAGAG 58.544 52.174 0.00 0.00 0.00 3.20
3248 3290 4.080299 GGAAGGAAGAGAGAGAGAGAGAGT 60.080 50.000 0.00 0.00 0.00 3.24
3249 3291 4.494091 AGGAAGAGAGAGAGAGAGAGTG 57.506 50.000 0.00 0.00 0.00 3.51
3250 3292 4.104086 AGGAAGAGAGAGAGAGAGAGTGA 58.896 47.826 0.00 0.00 0.00 3.41
3251 3293 4.080863 AGGAAGAGAGAGAGAGAGAGTGAC 60.081 50.000 0.00 0.00 0.00 3.67
3252 3294 4.323485 GGAAGAGAGAGAGAGAGAGTGACA 60.323 50.000 0.00 0.00 0.00 3.58
3253 3295 4.207891 AGAGAGAGAGAGAGAGTGACAC 57.792 50.000 0.00 0.00 0.00 3.67
3257 3299 3.674997 AGAGAGAGAGAGTGACACAGAC 58.325 50.000 8.59 0.00 0.00 3.51
3259 3301 3.146066 AGAGAGAGAGTGACACAGACAC 58.854 50.000 8.59 0.00 38.38 3.67
3270 3312 2.487762 GACACAGACACAGAGAGAGAGG 59.512 54.545 0.00 0.00 0.00 3.69
3318 3363 3.795623 TTTACAGGGTAGAGATGCGTC 57.204 47.619 0.00 0.00 0.00 5.19
3319 3364 1.306148 TACAGGGTAGAGATGCGTCG 58.694 55.000 0.00 0.00 0.00 5.12
3352 5954 3.181476 ACCATGCTTCAAACTTGTTGTCC 60.181 43.478 0.00 0.00 0.00 4.02
3359 5961 5.735922 GCTTCAAACTTGTTGTCCTGCATTA 60.736 40.000 0.00 0.00 0.00 1.90
3364 5966 7.446931 TCAAACTTGTTGTCCTGCATTATAAGA 59.553 33.333 0.00 0.00 0.00 2.10
3367 5969 4.842574 TGTTGTCCTGCATTATAAGAGCA 58.157 39.130 12.98 12.98 36.72 4.26
3369 5971 5.887598 TGTTGTCCTGCATTATAAGAGCATT 59.112 36.000 13.74 0.00 37.68 3.56
3371 5973 6.624352 TGTCCTGCATTATAAGAGCATTTC 57.376 37.500 13.74 8.83 37.68 2.17
3372 5974 5.532406 TGTCCTGCATTATAAGAGCATTTCC 59.468 40.000 13.74 5.75 37.68 3.13
3374 5976 5.766670 TCCTGCATTATAAGAGCATTTCCAG 59.233 40.000 13.74 4.06 37.68 3.86
3375 5977 5.443185 TGCATTATAAGAGCATTTCCAGC 57.557 39.130 10.38 0.00 32.55 4.85
3376 5978 4.888823 TGCATTATAAGAGCATTTCCAGCA 59.111 37.500 10.38 0.00 32.55 4.41
3378 5980 5.009410 GCATTATAAGAGCATTTCCAGCAGT 59.991 40.000 7.58 0.00 0.00 4.40
3379 5981 6.460676 GCATTATAAGAGCATTTCCAGCAGTT 60.461 38.462 7.58 0.00 0.00 3.16
3383 5985 0.250901 AGCATTTCCAGCAGTTCGGT 60.251 50.000 0.00 0.00 0.00 4.69
3385 5987 0.804989 CATTTCCAGCAGTTCGGTCC 59.195 55.000 0.00 0.00 0.00 4.46
3386 5988 0.322546 ATTTCCAGCAGTTCGGTCCC 60.323 55.000 0.00 0.00 0.00 4.46
3387 5989 2.406002 TTTCCAGCAGTTCGGTCCCC 62.406 60.000 0.00 0.00 0.00 4.81
3388 5990 3.636231 CCAGCAGTTCGGTCCCCA 61.636 66.667 0.00 0.00 0.00 4.96
3389 5991 2.046892 CAGCAGTTCGGTCCCCAG 60.047 66.667 0.00 0.00 0.00 4.45
3390 5992 4.021925 AGCAGTTCGGTCCCCAGC 62.022 66.667 0.00 0.00 0.00 4.85
3395 5997 3.078196 TTCGGTCCCCAGCGCATA 61.078 61.111 11.47 0.00 43.45 3.14
3396 5998 3.088941 TTCGGTCCCCAGCGCATAG 62.089 63.158 11.47 0.00 43.45 2.23
3398 6000 4.937431 GGTCCCCAGCGCATAGGC 62.937 72.222 11.47 3.00 0.00 3.93
3399 6001 4.937431 GTCCCCAGCGCATAGGCC 62.937 72.222 11.47 0.00 36.38 5.19
3408 6010 2.513897 GCATAGGCCGGCGTTCTT 60.514 61.111 28.71 10.01 0.00 2.52
3409 6011 2.112815 GCATAGGCCGGCGTTCTTT 61.113 57.895 28.71 7.68 0.00 2.52
3410 6012 2.014594 CATAGGCCGGCGTTCTTTC 58.985 57.895 28.71 7.85 0.00 2.62
3411 6013 1.520787 ATAGGCCGGCGTTCTTTCG 60.521 57.895 28.71 0.00 0.00 3.46
3412 6014 2.918230 ATAGGCCGGCGTTCTTTCGG 62.918 60.000 28.71 0.00 45.84 4.30
3418 6020 4.148645 GCGTTCTTTCGGGCGCTC 62.149 66.667 7.64 0.06 45.48 5.03
3419 6021 2.736995 CGTTCTTTCGGGCGCTCA 60.737 61.111 8.62 0.00 0.00 4.26
3420 6022 2.100631 CGTTCTTTCGGGCGCTCAT 61.101 57.895 8.62 0.00 0.00 2.90
3422 6024 1.449601 TTCTTTCGGGCGCTCATCC 60.450 57.895 8.62 0.00 0.00 3.51
3423 6025 3.264897 CTTTCGGGCGCTCATCCG 61.265 66.667 15.56 15.56 46.89 4.18
3436 6038 2.032808 GCTCATCCGGCGATTTTTAGAC 60.033 50.000 9.30 0.00 0.00 2.59
3437 6039 2.544267 CTCATCCGGCGATTTTTAGACC 59.456 50.000 9.30 0.00 0.00 3.85
3438 6040 1.602377 CATCCGGCGATTTTTAGACCC 59.398 52.381 9.30 0.00 0.00 4.46
3439 6041 0.906775 TCCGGCGATTTTTAGACCCT 59.093 50.000 9.30 0.00 0.00 4.34
3441 6043 1.014352 CGGCGATTTTTAGACCCTGG 58.986 55.000 0.00 0.00 0.00 4.45
3443 6045 1.389555 GCGATTTTTAGACCCTGGGG 58.610 55.000 18.88 7.87 42.03 4.96
3453 6055 4.195334 CCCTGGGGGCGATCAAGG 62.195 72.222 4.27 0.00 35.35 3.61
3455 6057 2.190578 CTGGGGGCGATCAAGGTC 59.809 66.667 0.00 0.00 0.00 3.85
3456 6058 3.406595 CTGGGGGCGATCAAGGTCC 62.407 68.421 0.00 0.00 0.00 4.46
3459 6061 2.190578 GGGCGATCAAGGTCCCAG 59.809 66.667 0.00 0.00 38.62 4.45
3460 6062 2.514824 GGCGATCAAGGTCCCAGC 60.515 66.667 0.00 0.00 0.00 4.85
3464 6066 1.225704 GATCAAGGTCCCAGCCAGG 59.774 63.158 0.00 0.00 37.03 4.45
3466 6068 4.748144 CAAGGTCCCAGCCAGGCC 62.748 72.222 8.22 0.00 35.39 5.19
3495 6097 2.985282 CCCTCAAGGCGCTGCAAA 60.985 61.111 7.64 0.00 0.00 3.68
3496 6098 2.345760 CCCTCAAGGCGCTGCAAAT 61.346 57.895 7.64 0.00 0.00 2.32
3497 6099 1.588082 CCTCAAGGCGCTGCAAATT 59.412 52.632 7.64 0.00 0.00 1.82
3498 6100 0.037975 CCTCAAGGCGCTGCAAATTT 60.038 50.000 7.64 0.00 0.00 1.82
3499 6101 1.202114 CCTCAAGGCGCTGCAAATTTA 59.798 47.619 7.64 0.00 0.00 1.40
3501 6103 3.316283 CTCAAGGCGCTGCAAATTTAAA 58.684 40.909 7.64 0.00 0.00 1.52
3502 6104 3.056304 TCAAGGCGCTGCAAATTTAAAC 58.944 40.909 7.64 0.00 0.00 2.01
3504 6106 3.385193 AGGCGCTGCAAATTTAAACTT 57.615 38.095 7.64 0.00 0.00 2.66
3507 6109 2.799978 GCGCTGCAAATTTAAACTTGGT 59.200 40.909 11.05 0.00 0.00 3.67
3508 6110 3.121025 GCGCTGCAAATTTAAACTTGGTC 60.121 43.478 11.05 0.00 0.00 4.02
3509 6111 3.428534 CGCTGCAAATTTAAACTTGGTCC 59.571 43.478 11.05 0.00 0.00 4.46
3510 6112 4.376146 GCTGCAAATTTAAACTTGGTCCA 58.624 39.130 11.05 0.76 0.00 4.02
3511 6113 4.996758 GCTGCAAATTTAAACTTGGTCCAT 59.003 37.500 11.05 0.00 0.00 3.41
3512 6114 5.469760 GCTGCAAATTTAAACTTGGTCCATT 59.530 36.000 11.05 0.00 0.00 3.16
3514 6116 5.994668 TGCAAATTTAAACTTGGTCCATTCC 59.005 36.000 11.05 0.00 0.00 3.01
3515 6117 5.411361 GCAAATTTAAACTTGGTCCATTCCC 59.589 40.000 11.05 0.00 0.00 3.97
3518 6120 2.375014 AAACTTGGTCCATTCCCGTT 57.625 45.000 0.00 0.00 0.00 4.44
3519 6121 2.375014 AACTTGGTCCATTCCCGTTT 57.625 45.000 0.00 0.00 0.00 3.60
3522 6124 0.478942 TTGGTCCATTCCCGTTTCCA 59.521 50.000 0.00 0.00 0.00 3.53
3523 6125 0.250989 TGGTCCATTCCCGTTTCCAC 60.251 55.000 0.00 0.00 0.00 4.02
3524 6126 0.250989 GGTCCATTCCCGTTTCCACA 60.251 55.000 0.00 0.00 0.00 4.17
3527 6129 2.362717 GTCCATTCCCGTTTCCACAAAA 59.637 45.455 0.00 0.00 0.00 2.44
3536 6138 1.923864 GTTTCCACAAAACGCCACAAG 59.076 47.619 0.00 0.00 38.06 3.16
3537 6139 1.178276 TTCCACAAAACGCCACAAGT 58.822 45.000 0.00 0.00 0.00 3.16
3538 6140 0.736053 TCCACAAAACGCCACAAGTC 59.264 50.000 0.00 0.00 0.00 3.01
3540 6142 0.591236 CACAAAACGCCACAAGTCCG 60.591 55.000 0.00 0.00 0.00 4.79
3541 6143 1.008995 CAAAACGCCACAAGTCCGG 60.009 57.895 0.00 0.00 0.00 5.14
3542 6144 2.841160 AAAACGCCACAAGTCCGGC 61.841 57.895 0.00 0.00 45.28 6.13
3543 6145 3.767630 AAACGCCACAAGTCCGGCT 62.768 57.895 0.00 0.00 46.62 5.52
3544 6146 4.988598 ACGCCACAAGTCCGGCTG 62.989 66.667 0.00 0.00 46.62 4.85
3547 6149 4.988598 CCACAAGTCCGGCTGCGT 62.989 66.667 0.00 0.00 0.00 5.24
3548 6150 3.414700 CACAAGTCCGGCTGCGTC 61.415 66.667 0.00 0.00 0.00 5.19
3550 6152 3.414700 CAAGTCCGGCTGCGTCAC 61.415 66.667 0.00 0.00 0.00 3.67
3551 6153 3.923864 AAGTCCGGCTGCGTCACA 61.924 61.111 0.00 0.00 0.00 3.58
3559 6161 3.234390 CTGCGTCACAGTTCCGTG 58.766 61.111 0.00 0.00 41.86 4.94
3560 6162 1.299850 CTGCGTCACAGTTCCGTGA 60.300 57.895 0.00 0.00 43.54 4.35
3561 6163 0.667487 CTGCGTCACAGTTCCGTGAT 60.667 55.000 0.00 0.00 46.98 3.06
3562 6164 0.666274 TGCGTCACAGTTCCGTGATC 60.666 55.000 0.00 0.00 46.98 2.92
3563 6165 0.666274 GCGTCACAGTTCCGTGATCA 60.666 55.000 0.00 0.00 46.98 2.92
3565 6167 1.920574 CGTCACAGTTCCGTGATCATC 59.079 52.381 0.00 0.00 46.98 2.92
3567 6169 2.668457 GTCACAGTTCCGTGATCATCAC 59.332 50.000 7.83 7.83 46.98 3.06
3568 6170 2.002586 CACAGTTCCGTGATCATCACC 58.997 52.381 12.37 0.00 44.20 4.02
3569 6171 1.902508 ACAGTTCCGTGATCATCACCT 59.097 47.619 12.37 0.32 44.20 4.00
3571 6173 2.674852 CAGTTCCGTGATCATCACCTTG 59.325 50.000 12.37 1.50 44.20 3.61
3572 6174 1.398390 GTTCCGTGATCATCACCTTGC 59.602 52.381 12.37 0.00 44.20 4.01
3573 6175 0.107703 TCCGTGATCATCACCTTGCC 60.108 55.000 12.37 0.00 44.20 4.52
3575 6177 0.729116 CGTGATCATCACCTTGCCAC 59.271 55.000 12.37 0.00 44.20 5.01
3576 6178 1.825090 GTGATCATCACCTTGCCACA 58.175 50.000 6.50 0.00 41.37 4.17
3577 6179 1.741706 GTGATCATCACCTTGCCACAG 59.258 52.381 6.50 0.00 41.37 3.66
3579 6181 2.224843 TGATCATCACCTTGCCACAGTT 60.225 45.455 0.00 0.00 0.00 3.16
3580 6182 1.896220 TCATCACCTTGCCACAGTTC 58.104 50.000 0.00 0.00 0.00 3.01
3581 6183 1.142667 TCATCACCTTGCCACAGTTCA 59.857 47.619 0.00 0.00 0.00 3.18
3582 6184 1.538512 CATCACCTTGCCACAGTTCAG 59.461 52.381 0.00 0.00 0.00 3.02
3584 6186 1.893808 ACCTTGCCACAGTTCAGCG 60.894 57.895 0.00 0.00 0.00 5.18
3585 6187 1.597854 CCTTGCCACAGTTCAGCGA 60.598 57.895 0.00 0.00 0.00 4.93
3587 6189 0.445436 CTTGCCACAGTTCAGCGATC 59.555 55.000 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 4.760047 CTTGTCCAGCCCGTCCCG 62.760 72.222 0.00 0.00 0.00 5.14
133 134 3.786635 AGAATATGAACTGGTCGCTGAC 58.213 45.455 0.79 0.79 0.00 3.51
134 135 3.447229 TGAGAATATGAACTGGTCGCTGA 59.553 43.478 0.00 0.00 0.00 4.26
135 136 3.785486 TGAGAATATGAACTGGTCGCTG 58.215 45.455 0.00 0.00 0.00 5.18
136 137 4.471904 TTGAGAATATGAACTGGTCGCT 57.528 40.909 0.00 0.00 0.00 4.93
137 138 5.545658 TTTTGAGAATATGAACTGGTCGC 57.454 39.130 0.00 0.00 0.00 5.19
162 163 1.947456 GGAACTGGTCGCTGACTTTTT 59.053 47.619 8.26 0.82 32.47 1.94
163 164 1.134220 TGGAACTGGTCGCTGACTTTT 60.134 47.619 8.26 1.10 32.47 2.27
164 165 0.468226 TGGAACTGGTCGCTGACTTT 59.532 50.000 8.26 1.38 32.47 2.66
165 166 0.034059 CTGGAACTGGTCGCTGACTT 59.966 55.000 8.26 0.00 32.47 3.01
166 167 0.827925 TCTGGAACTGGTCGCTGACT 60.828 55.000 8.26 0.00 32.47 3.41
220 221 0.385723 GTCGTCCGCGGCTAGATTAG 60.386 60.000 23.51 4.99 39.99 1.73
286 288 2.337532 CGACGAACGGACCAAGGT 59.662 61.111 0.00 0.00 38.46 3.50
316 319 0.768622 ATTTTGAGTGGGTCACGGGA 59.231 50.000 0.00 0.00 39.64 5.14
400 405 4.829518 CGTCGCCATCGCTCGTCA 62.830 66.667 0.00 0.00 35.26 4.35
458 465 2.561733 TCTCACGCAGTAATTCTCCG 57.438 50.000 0.00 0.00 41.61 4.63
484 491 2.571757 CGCAGCTGGTACCTTCGA 59.428 61.111 17.12 0.00 0.00 3.71
485 492 2.509336 CCGCAGCTGGTACCTTCG 60.509 66.667 17.12 8.26 0.00 3.79
495 502 0.035881 CATGTATCCATCCCGCAGCT 59.964 55.000 0.00 0.00 0.00 4.24
498 505 1.127343 TCACATGTATCCATCCCGCA 58.873 50.000 0.00 0.00 0.00 5.69
499 506 1.873591 GTTCACATGTATCCATCCCGC 59.126 52.381 0.00 0.00 0.00 6.13
500 507 3.475566 AGTTCACATGTATCCATCCCG 57.524 47.619 0.00 0.00 0.00 5.14
501 508 4.505039 GGGTAGTTCACATGTATCCATCCC 60.505 50.000 0.00 3.83 0.00 3.85
502 509 4.102524 TGGGTAGTTCACATGTATCCATCC 59.897 45.833 0.00 0.00 0.00 3.51
503 510 5.290493 TGGGTAGTTCACATGTATCCATC 57.710 43.478 0.00 0.00 0.00 3.51
504 511 5.708736 TTGGGTAGTTCACATGTATCCAT 57.291 39.130 0.00 0.00 0.00 3.41
505 512 5.506730 TTTGGGTAGTTCACATGTATCCA 57.493 39.130 0.00 0.00 0.00 3.41
506 513 6.119536 TCATTTGGGTAGTTCACATGTATCC 58.880 40.000 0.00 0.00 0.00 2.59
507 514 7.047891 TCTCATTTGGGTAGTTCACATGTATC 58.952 38.462 0.00 0.00 0.00 2.24
508 515 6.957631 TCTCATTTGGGTAGTTCACATGTAT 58.042 36.000 0.00 0.00 0.00 2.29
509 516 6.013725 ACTCTCATTTGGGTAGTTCACATGTA 60.014 38.462 0.00 0.00 0.00 2.29
510 517 5.221925 ACTCTCATTTGGGTAGTTCACATGT 60.222 40.000 0.00 0.00 0.00 3.21
511 518 5.122869 CACTCTCATTTGGGTAGTTCACATG 59.877 44.000 0.00 0.00 0.00 3.21
512 519 5.221925 ACACTCTCATTTGGGTAGTTCACAT 60.222 40.000 0.00 0.00 0.00 3.21
513 520 4.102524 ACACTCTCATTTGGGTAGTTCACA 59.897 41.667 0.00 0.00 0.00 3.58
514 521 4.452455 CACACTCTCATTTGGGTAGTTCAC 59.548 45.833 0.00 0.00 0.00 3.18
515 522 4.504864 CCACACTCTCATTTGGGTAGTTCA 60.505 45.833 0.00 0.00 0.00 3.18
516 523 4.003648 CCACACTCTCATTTGGGTAGTTC 58.996 47.826 0.00 0.00 0.00 3.01
517 524 3.244911 CCCACACTCTCATTTGGGTAGTT 60.245 47.826 0.00 0.00 43.44 2.24
518 525 2.305927 CCCACACTCTCATTTGGGTAGT 59.694 50.000 0.00 0.00 43.44 2.73
519 526 2.991250 CCCACACTCTCATTTGGGTAG 58.009 52.381 0.00 0.00 43.44 3.18
523 530 2.025981 TCCATCCCACACTCTCATTTGG 60.026 50.000 0.00 0.00 0.00 3.28
524 531 3.354948 TCCATCCCACACTCTCATTTG 57.645 47.619 0.00 0.00 0.00 2.32
525 532 4.474651 TGTATCCATCCCACACTCTCATTT 59.525 41.667 0.00 0.00 0.00 2.32
526 533 4.040047 TGTATCCATCCCACACTCTCATT 58.960 43.478 0.00 0.00 0.00 2.57
527 534 3.657610 TGTATCCATCCCACACTCTCAT 58.342 45.455 0.00 0.00 0.00 2.90
528 535 3.114643 TGTATCCATCCCACACTCTCA 57.885 47.619 0.00 0.00 0.00 3.27
529 536 3.389329 ACATGTATCCATCCCACACTCTC 59.611 47.826 0.00 0.00 0.00 3.20
530 537 3.135348 CACATGTATCCATCCCACACTCT 59.865 47.826 0.00 0.00 0.00 3.24
531 538 3.134623 TCACATGTATCCATCCCACACTC 59.865 47.826 0.00 0.00 0.00 3.51
532 539 3.114606 TCACATGTATCCATCCCACACT 58.885 45.455 0.00 0.00 0.00 3.55
533 540 3.558931 TCACATGTATCCATCCCACAC 57.441 47.619 0.00 0.00 0.00 3.82
534 541 3.523157 AGTTCACATGTATCCATCCCACA 59.477 43.478 0.00 0.00 0.00 4.17
535 542 4.156455 AGTTCACATGTATCCATCCCAC 57.844 45.455 0.00 0.00 0.00 4.61
536 543 4.102524 GGTAGTTCACATGTATCCATCCCA 59.897 45.833 0.00 0.00 0.00 4.37
595 602 8.697846 TCTTTAGTTCACATGTATTAAGGACG 57.302 34.615 0.00 0.00 0.00 4.79
604 611 9.275398 ACCGTTTATTTCTTTAGTTCACATGTA 57.725 29.630 0.00 0.00 0.00 2.29
605 612 8.161699 ACCGTTTATTTCTTTAGTTCACATGT 57.838 30.769 0.00 0.00 0.00 3.21
606 613 8.504005 AGACCGTTTATTTCTTTAGTTCACATG 58.496 33.333 0.00 0.00 0.00 3.21
639 662 4.161001 AGACCTTTTACGGTACATCGGATT 59.839 41.667 0.00 0.00 37.42 3.01
643 666 4.100707 TGAGACCTTTTACGGTACATCG 57.899 45.455 0.00 0.00 37.42 3.84
669 692 9.469097 AACTACTACAAATGGCCATACAATTTA 57.531 29.630 21.15 6.26 0.00 1.40
670 693 7.954666 ACTACTACAAATGGCCATACAATTT 57.045 32.000 21.15 7.10 0.00 1.82
671 694 7.613801 TCAACTACTACAAATGGCCATACAATT 59.386 33.333 21.15 6.61 0.00 2.32
673 696 6.477253 TCAACTACTACAAATGGCCATACAA 58.523 36.000 21.15 4.19 0.00 2.41
674 697 6.056090 TCAACTACTACAAATGGCCATACA 57.944 37.500 21.15 3.43 0.00 2.29
675 698 6.821665 TCTTCAACTACTACAAATGGCCATAC 59.178 38.462 21.15 0.00 0.00 2.39
676 699 6.953101 TCTTCAACTACTACAAATGGCCATA 58.047 36.000 21.15 1.40 0.00 2.74
677 700 5.815581 TCTTCAACTACTACAAATGGCCAT 58.184 37.500 14.09 14.09 0.00 4.40
678 701 5.235850 TCTTCAACTACTACAAATGGCCA 57.764 39.130 8.56 8.56 0.00 5.36
679 702 6.569179 TTTCTTCAACTACTACAAATGGCC 57.431 37.500 0.00 0.00 0.00 5.36
680 703 8.915654 CATTTTTCTTCAACTACTACAAATGGC 58.084 33.333 0.00 0.00 0.00 4.40
725 748 5.123227 CACAAGAGGTTGGAGTTGTTTCTA 58.877 41.667 0.00 0.00 38.07 2.10
727 750 3.489229 GCACAAGAGGTTGGAGTTGTTTC 60.489 47.826 0.00 0.00 38.07 2.78
744 767 2.823924 TAGGCGAGTAGTTTGCACAA 57.176 45.000 0.00 0.00 37.99 3.33
760 783 0.834612 TTACCGAACAGGGCCATAGG 59.165 55.000 6.18 3.83 46.96 2.57
761 784 2.104111 TCATTACCGAACAGGGCCATAG 59.896 50.000 6.18 0.00 46.96 2.23
762 785 2.120312 TCATTACCGAACAGGGCCATA 58.880 47.619 6.18 0.00 46.96 2.74
763 786 0.916086 TCATTACCGAACAGGGCCAT 59.084 50.000 6.18 0.00 46.96 4.40
764 787 0.916086 ATCATTACCGAACAGGGCCA 59.084 50.000 6.18 0.00 46.96 5.36
765 788 1.594331 GATCATTACCGAACAGGGCC 58.406 55.000 0.00 0.00 46.96 5.80
766 789 1.594331 GGATCATTACCGAACAGGGC 58.406 55.000 0.00 0.00 46.96 5.19
775 798 1.004918 CCGGGAGCGGATCATTACC 60.005 63.158 0.00 0.00 0.00 2.85
776 799 0.391597 TTCCGGGAGCGGATCATTAC 59.608 55.000 0.00 0.00 37.93 1.89
777 800 1.275291 GATTCCGGGAGCGGATCATTA 59.725 52.381 0.00 0.00 37.93 1.90
778 801 0.035458 GATTCCGGGAGCGGATCATT 59.965 55.000 0.00 0.00 37.93 2.57
779 802 0.833834 AGATTCCGGGAGCGGATCAT 60.834 55.000 0.00 0.00 37.93 2.45
780 803 1.457643 AGATTCCGGGAGCGGATCA 60.458 57.895 0.00 0.00 37.93 2.92
781 804 1.005630 CAGATTCCGGGAGCGGATC 60.006 63.158 0.00 0.00 37.93 3.36
782 805 3.142393 CAGATTCCGGGAGCGGAT 58.858 61.111 0.00 0.00 37.93 4.18
783 806 3.849951 GCAGATTCCGGGAGCGGA 61.850 66.667 0.93 0.00 36.09 5.54
786 809 3.798954 CTCCGCAGATTCCGGGAGC 62.799 68.421 0.00 0.00 45.60 4.70
787 810 2.419198 CTCCGCAGATTCCGGGAG 59.581 66.667 0.00 0.00 45.60 4.30
788 811 3.849951 GCTCCGCAGATTCCGGGA 61.850 66.667 0.00 0.00 45.60 5.14
792 815 4.162690 ACCCGCTCCGCAGATTCC 62.163 66.667 0.00 0.00 0.00 3.01
793 816 2.892425 CACCCGCTCCGCAGATTC 60.892 66.667 0.00 0.00 0.00 2.52
794 817 3.390521 TCACCCGCTCCGCAGATT 61.391 61.111 0.00 0.00 0.00 2.40
795 818 4.148825 GTCACCCGCTCCGCAGAT 62.149 66.667 0.00 0.00 0.00 2.90
801 824 4.329545 TTGCCAGTCACCCGCTCC 62.330 66.667 0.00 0.00 0.00 4.70
802 825 3.050275 GTTGCCAGTCACCCGCTC 61.050 66.667 0.00 0.00 0.00 5.03
803 826 3.537206 GAGTTGCCAGTCACCCGCT 62.537 63.158 0.00 0.00 0.00 5.52
804 827 3.050275 GAGTTGCCAGTCACCCGC 61.050 66.667 0.00 0.00 0.00 6.13
805 828 2.358737 GGAGTTGCCAGTCACCCG 60.359 66.667 0.00 0.00 36.34 5.28
806 829 2.836154 TGGAGTTGCCAGTCACCC 59.164 61.111 0.00 0.00 43.33 4.61
813 836 1.686052 GTCAAAATGGTGGAGTTGCCA 59.314 47.619 0.00 0.00 46.96 4.92
814 837 1.000843 GGTCAAAATGGTGGAGTTGCC 59.999 52.381 0.00 0.00 37.10 4.52
815 838 1.963515 AGGTCAAAATGGTGGAGTTGC 59.036 47.619 0.00 0.00 0.00 4.17
816 839 4.141287 TGTAGGTCAAAATGGTGGAGTTG 58.859 43.478 0.00 0.00 0.00 3.16
817 840 4.398319 CTGTAGGTCAAAATGGTGGAGTT 58.602 43.478 0.00 0.00 0.00 3.01
818 841 3.810743 GCTGTAGGTCAAAATGGTGGAGT 60.811 47.826 0.00 0.00 0.00 3.85
819 842 2.749621 GCTGTAGGTCAAAATGGTGGAG 59.250 50.000 0.00 0.00 0.00 3.86
820 843 2.375174 AGCTGTAGGTCAAAATGGTGGA 59.625 45.455 0.00 0.00 0.00 4.02
821 844 2.749621 GAGCTGTAGGTCAAAATGGTGG 59.250 50.000 6.23 0.00 41.81 4.61
822 845 2.749621 GGAGCTGTAGGTCAAAATGGTG 59.250 50.000 12.54 0.00 43.82 4.17
823 846 2.615493 CGGAGCTGTAGGTCAAAATGGT 60.615 50.000 12.54 0.00 43.82 3.55
824 847 2.009774 CGGAGCTGTAGGTCAAAATGG 58.990 52.381 12.54 0.00 43.82 3.16
840 863 4.821589 GGAGCGGAGTTGGCGGAG 62.822 72.222 0.00 0.00 35.00 4.63
858 881 4.154347 CTCCGCTCCACAGCTCCC 62.154 72.222 0.00 0.00 44.40 4.30
859 882 4.828925 GCTCCGCTCCACAGCTCC 62.829 72.222 0.00 0.00 44.40 4.70
862 885 4.521062 ATCGCTCCGCTCCACAGC 62.521 66.667 0.00 0.00 42.96 4.40
863 886 2.584418 CATCGCTCCGCTCCACAG 60.584 66.667 0.00 0.00 0.00 3.66
864 887 4.819761 GCATCGCTCCGCTCCACA 62.820 66.667 0.00 0.00 0.00 4.17
868 891 4.873129 TTCGGCATCGCTCCGCTC 62.873 66.667 5.19 0.00 46.05 5.03
872 895 3.567797 GCTGTTCGGCATCGCTCC 61.568 66.667 0.00 0.00 36.13 4.70
873 896 2.815211 TGCTGTTCGGCATCGCTC 60.815 61.111 1.90 0.00 37.29 5.03
874 897 3.121030 GTGCTGTTCGGCATCGCT 61.121 61.111 9.55 0.00 44.34 4.93
875 898 4.166011 GGTGCTGTTCGGCATCGC 62.166 66.667 9.55 0.00 44.34 4.58
876 899 0.530650 ATAGGTGCTGTTCGGCATCG 60.531 55.000 9.55 0.00 46.77 3.84
877 900 2.526304 TATAGGTGCTGTTCGGCATC 57.474 50.000 9.55 9.08 44.34 3.91
878 901 4.826274 ATATATAGGTGCTGTTCGGCAT 57.174 40.909 9.55 0.00 44.34 4.40
879 902 4.039852 TCAATATATAGGTGCTGTTCGGCA 59.960 41.667 1.90 1.90 40.15 5.69
880 903 4.566004 TCAATATATAGGTGCTGTTCGGC 58.434 43.478 0.00 0.00 0.00 5.54
881 904 4.627467 GCTCAATATATAGGTGCTGTTCGG 59.373 45.833 0.00 0.00 0.00 4.30
882 905 5.230182 TGCTCAATATATAGGTGCTGTTCG 58.770 41.667 10.72 0.00 0.00 3.95
883 906 5.641209 CCTGCTCAATATATAGGTGCTGTTC 59.359 44.000 10.72 0.00 0.00 3.18
884 907 5.513788 CCCTGCTCAATATATAGGTGCTGTT 60.514 44.000 10.72 0.00 0.00 3.16
885 908 4.019860 CCCTGCTCAATATATAGGTGCTGT 60.020 45.833 10.72 0.00 0.00 4.40
886 909 4.511527 CCCTGCTCAATATATAGGTGCTG 58.488 47.826 10.72 10.03 0.00 4.41
887 910 3.054802 GCCCTGCTCAATATATAGGTGCT 60.055 47.826 10.72 0.00 0.00 4.40
888 911 3.054802 AGCCCTGCTCAATATATAGGTGC 60.055 47.826 0.00 0.00 30.62 5.01
889 912 4.511527 CAGCCCTGCTCAATATATAGGTG 58.488 47.826 0.00 0.00 36.40 4.00
890 913 4.833478 CAGCCCTGCTCAATATATAGGT 57.167 45.455 0.00 0.00 36.40 3.08
917 940 1.135575 GCTAGCAGATGTGTTGCCAAC 60.136 52.381 10.63 0.00 42.48 3.77
982 1009 2.642311 TCATGGCCACCTAAAACTCTCA 59.358 45.455 8.16 0.00 0.00 3.27
1029 1056 2.304470 GCTGGTCTCTCCTTCTCCTTTT 59.696 50.000 0.00 0.00 37.07 2.27
1087 1115 5.596361 TCTTTGAAAATGGGCTGTGAGTTAA 59.404 36.000 0.00 0.00 0.00 2.01
1099 1127 7.551035 TGTGAATTTTGGTCTTTGAAAATGG 57.449 32.000 0.00 0.00 33.16 3.16
1105 1134 9.829507 ATATTTGTTGTGAATTTTGGTCTTTGA 57.170 25.926 0.00 0.00 0.00 2.69
1152 1181 0.327924 TTACGGACGGAGGGAGTACA 59.672 55.000 0.00 0.00 0.00 2.90
1153 1182 1.463674 TTTACGGACGGAGGGAGTAC 58.536 55.000 0.00 0.00 0.00 2.73
1154 1183 2.442236 ATTTACGGACGGAGGGAGTA 57.558 50.000 0.00 0.00 0.00 2.59
1155 1184 2.027385 GTATTTACGGACGGAGGGAGT 58.973 52.381 0.00 0.00 0.00 3.85
1156 1185 2.305009 AGTATTTACGGACGGAGGGAG 58.695 52.381 0.00 0.00 0.00 4.30
1157 1186 2.428171 CAAGTATTTACGGACGGAGGGA 59.572 50.000 0.00 0.00 0.00 4.20
1158 1187 2.167075 ACAAGTATTTACGGACGGAGGG 59.833 50.000 0.00 0.00 0.00 4.30
1159 1188 3.442100 GACAAGTATTTACGGACGGAGG 58.558 50.000 0.00 0.00 0.00 4.30
1160 1189 3.103738 CGACAAGTATTTACGGACGGAG 58.896 50.000 0.00 0.00 0.00 4.63
1161 1190 2.159393 CCGACAAGTATTTACGGACGGA 60.159 50.000 15.32 0.00 45.31 4.69
1162 1191 2.159393 TCCGACAAGTATTTACGGACGG 60.159 50.000 12.08 14.71 45.87 4.79
1163 1192 3.103738 CTCCGACAAGTATTTACGGACG 58.896 50.000 12.08 7.23 45.87 4.79
1164 1193 4.361451 TCTCCGACAAGTATTTACGGAC 57.639 45.455 12.08 0.00 45.87 4.79
1166 1195 5.006358 CCATTTCTCCGACAAGTATTTACGG 59.994 44.000 0.00 0.00 44.09 4.02
1167 1196 5.808540 TCCATTTCTCCGACAAGTATTTACG 59.191 40.000 0.00 0.00 0.00 3.18
1168 1197 7.280205 ACATCCATTTCTCCGACAAGTATTTAC 59.720 37.037 0.00 0.00 0.00 2.01
1169 1198 7.335627 ACATCCATTTCTCCGACAAGTATTTA 58.664 34.615 0.00 0.00 0.00 1.40
1170 1199 6.180472 ACATCCATTTCTCCGACAAGTATTT 58.820 36.000 0.00 0.00 0.00 1.40
1171 1200 5.745227 ACATCCATTTCTCCGACAAGTATT 58.255 37.500 0.00 0.00 0.00 1.89
1172 1201 5.359194 ACATCCATTTCTCCGACAAGTAT 57.641 39.130 0.00 0.00 0.00 2.12
1173 1202 4.819105 ACATCCATTTCTCCGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
1174 1203 3.703001 ACATCCATTTCTCCGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
1175 1204 5.605534 AGATACATCCATTTCTCCGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
1176 1205 5.614324 AGATACATCCATTTCTCCGACAA 57.386 39.130 0.00 0.00 0.00 3.18
1177 1206 6.016192 GTCTAGATACATCCATTTCTCCGACA 60.016 42.308 0.00 0.00 0.00 4.35
1178 1207 6.016192 TGTCTAGATACATCCATTTCTCCGAC 60.016 42.308 0.00 0.00 0.00 4.79
1179 1208 6.068670 TGTCTAGATACATCCATTTCTCCGA 58.931 40.000 0.00 0.00 0.00 4.55
1180 1209 6.332735 TGTCTAGATACATCCATTTCTCCG 57.667 41.667 0.00 0.00 0.00 4.63
1181 1210 9.814899 CATATGTCTAGATACATCCATTTCTCC 57.185 37.037 0.00 0.00 40.52 3.71
1235 1264 7.268447 CGTCCAAAATTACTTGTCGAAGAAATC 59.732 37.037 0.00 0.00 39.69 2.17
1236 1265 7.075741 CGTCCAAAATTACTTGTCGAAGAAAT 58.924 34.615 0.00 0.00 39.69 2.17
1237 1266 6.423862 CGTCCAAAATTACTTGTCGAAGAAA 58.576 36.000 0.00 0.00 39.69 2.52
1238 1267 5.049954 CCGTCCAAAATTACTTGTCGAAGAA 60.050 40.000 0.00 0.00 39.69 2.52
1239 1268 4.449743 CCGTCCAAAATTACTTGTCGAAGA 59.550 41.667 0.00 0.00 32.98 2.87
1240 1269 4.449743 TCCGTCCAAAATTACTTGTCGAAG 59.550 41.667 0.00 0.00 35.07 3.79
1241 1270 4.378774 TCCGTCCAAAATTACTTGTCGAA 58.621 39.130 0.00 0.00 0.00 3.71
1242 1271 3.991773 CTCCGTCCAAAATTACTTGTCGA 59.008 43.478 6.39 0.00 0.00 4.20
1243 1272 3.124636 CCTCCGTCCAAAATTACTTGTCG 59.875 47.826 0.00 0.00 0.00 4.35
1244 1273 3.439129 CCCTCCGTCCAAAATTACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
1245 1274 3.073356 TCCCTCCGTCCAAAATTACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
1246 1275 3.681593 TCCCTCCGTCCAAAATTACTTG 58.318 45.455 0.00 0.00 0.00 3.16
1247 1276 3.329814 ACTCCCTCCGTCCAAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
1248 1277 2.910977 ACTCCCTCCGTCCAAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1249 1278 3.345508 ACTCCCTCCGTCCAAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1250 1279 4.098894 AGTACTCCCTCCGTCCAAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
1251 1280 2.910977 AGTACTCCCTCCGTCCAAAATT 59.089 45.455 0.00 0.00 0.00 1.82
1252 1281 2.547990 AGTACTCCCTCCGTCCAAAAT 58.452 47.619 0.00 0.00 0.00 1.82
1253 1282 2.019807 AGTACTCCCTCCGTCCAAAA 57.980 50.000 0.00 0.00 0.00 2.44
1254 1283 1.621814 CAAGTACTCCCTCCGTCCAAA 59.378 52.381 0.00 0.00 0.00 3.28
1255 1284 1.263356 CAAGTACTCCCTCCGTCCAA 58.737 55.000 0.00 0.00 0.00 3.53
1256 1285 0.613853 CCAAGTACTCCCTCCGTCCA 60.614 60.000 0.00 0.00 0.00 4.02
1257 1286 1.957765 GCCAAGTACTCCCTCCGTCC 61.958 65.000 0.00 0.00 0.00 4.79
1258 1287 1.255667 TGCCAAGTACTCCCTCCGTC 61.256 60.000 0.00 0.00 0.00 4.79
1259 1288 0.617820 ATGCCAAGTACTCCCTCCGT 60.618 55.000 0.00 0.00 0.00 4.69
1260 1289 0.105039 GATGCCAAGTACTCCCTCCG 59.895 60.000 0.00 0.00 0.00 4.63
1261 1290 0.105039 CGATGCCAAGTACTCCCTCC 59.895 60.000 0.00 0.00 0.00 4.30
1262 1291 1.112113 TCGATGCCAAGTACTCCCTC 58.888 55.000 0.00 0.00 0.00 4.30
1263 1292 0.824759 GTCGATGCCAAGTACTCCCT 59.175 55.000 0.00 0.00 0.00 4.20
1264 1293 0.535335 TGTCGATGCCAAGTACTCCC 59.465 55.000 0.00 0.00 0.00 4.30
1265 1294 2.604046 ATGTCGATGCCAAGTACTCC 57.396 50.000 0.00 0.00 0.00 3.85
1266 1295 4.033358 CAGAAATGTCGATGCCAAGTACTC 59.967 45.833 0.00 0.00 0.00 2.59
1274 1303 0.659957 GAGCCAGAAATGTCGATGCC 59.340 55.000 0.00 0.00 0.00 4.40
1336 1365 8.925161 TTCTGGTACAAATGAACAAAAAGAAG 57.075 30.769 0.00 0.00 38.70 2.85
1395 1424 2.271800 CACACTTCTATCACCGCCTTC 58.728 52.381 0.00 0.00 0.00 3.46
1503 1532 4.339814 TCATGATTGCTGCATATTGCTTCA 59.660 37.500 1.84 0.00 45.31 3.02
1516 1545 2.161012 CACGAAGCTTGTCATGATTGCT 59.839 45.455 2.10 12.29 35.30 3.91
1677 1706 4.733725 AAGGAGCCCGGTAGCCCA 62.734 66.667 0.00 0.00 0.00 5.36
1716 1745 5.934043 TGAGTGAAACAGATGAACACTATGG 59.066 40.000 0.00 0.00 41.01 2.74
1818 1847 5.768164 ACAAACAATAGTTGTAGGACCTTGG 59.232 40.000 0.00 0.00 44.59 3.61
1996 2025 1.597027 CACCGAGCACCCGTTCTTT 60.597 57.895 0.00 0.00 0.00 2.52
2003 2032 1.303317 ATTTGTCCACCGAGCACCC 60.303 57.895 0.00 0.00 0.00 4.61
2013 2042 6.071447 CCAGAAATGTCAATACCATTTGTCCA 60.071 38.462 3.33 0.00 41.34 4.02
2026 2055 4.959210 TGTTTTTCTCCCCAGAAATGTCAA 59.041 37.500 0.00 0.00 46.05 3.18
2037 2066 3.009584 AGACATCCTCTGTTTTTCTCCCC 59.990 47.826 0.00 0.00 38.54 4.81
2055 2084 6.686378 GCTGGTTCATATCTCCATTGTAGACA 60.686 42.308 0.00 0.00 0.00 3.41
2097 2126 8.246180 TCTTCAACAAGATATTCCAAAGATTGC 58.754 33.333 0.00 0.00 33.38 3.56
2338 2369 5.507149 CCAGTTGGATTCGAACAATTCAACA 60.507 40.000 18.89 0.00 44.64 3.33
2341 2372 3.505680 CCCAGTTGGATTCGAACAATTCA 59.494 43.478 13.12 0.00 37.39 2.57
2370 2401 1.531149 CGTTGCTTTCCGAGTTGTCAT 59.469 47.619 0.00 0.00 0.00 3.06
2371 2402 0.934496 CGTTGCTTTCCGAGTTGTCA 59.066 50.000 0.00 0.00 0.00 3.58
2389 2420 4.514577 AGGGGATCGCGCACTTCG 62.515 66.667 8.75 0.00 42.12 3.79
2397 2428 4.951963 CGCTTCGGAGGGGATCGC 62.952 72.222 0.00 0.06 32.53 4.58
2431 2462 1.425066 TCCATCACTGCCCTCAAACTT 59.575 47.619 0.00 0.00 0.00 2.66
2493 2524 2.755650 ACGTGAATTTGTCGAAGAGCT 58.244 42.857 0.00 0.00 36.95 4.09
2494 2525 3.427528 TGTACGTGAATTTGTCGAAGAGC 59.572 43.478 0.00 0.00 36.95 4.09
2510 2541 0.318869 TGTTCGGCGACATTGTACGT 60.319 50.000 10.16 0.00 0.00 3.57
2524 2555 1.738099 CTCCCTCGCAAGGTGTTCG 60.738 63.158 0.00 0.00 41.59 3.95
2564 2595 9.762933 CCATTATTTTCTTTTCAAGGACAGAAA 57.237 29.630 0.00 0.00 34.23 2.52
2642 2673 3.329929 AAACAAGACCCGGTAGATGAC 57.670 47.619 0.00 0.00 0.00 3.06
2696 2727 2.099098 CAGCCGAGGACAACAAAACTTT 59.901 45.455 0.00 0.00 0.00 2.66
2854 2887 6.494893 TGGCATTGTAAGTGTAGATGAAAC 57.505 37.500 0.00 0.00 0.00 2.78
2858 2891 5.182950 TGGTTTGGCATTGTAAGTGTAGATG 59.817 40.000 0.00 0.00 0.00 2.90
2991 3024 7.040132 TGCTCAATTTGAACCATACATGTTGTA 60.040 33.333 2.30 0.00 37.24 2.41
3011 3044 5.840243 ATGCTGCAGTTATTATTGCTCAA 57.160 34.783 16.64 0.00 40.87 3.02
3088 3121 0.321346 GCCAACAAAGGGAATGGGTG 59.679 55.000 0.00 0.00 33.45 4.61
3111 3144 8.739039 CATTCCCTTCATAATTTTGCCGATATA 58.261 33.333 0.00 0.00 0.00 0.86
3166 3208 8.874744 ATTTGGCATGCTATGATACTTCTATT 57.125 30.769 18.92 0.00 0.00 1.73
3214 3256 1.491332 TCTTCCTTCCCGTTTGGTTGA 59.509 47.619 0.00 0.00 34.77 3.18
3227 3269 4.536090 TCACTCTCTCTCTCTCTCTTCCTT 59.464 45.833 0.00 0.00 0.00 3.36
3230 3272 4.631813 GTGTCACTCTCTCTCTCTCTCTTC 59.368 50.000 0.00 0.00 0.00 2.87
3231 3273 4.041567 TGTGTCACTCTCTCTCTCTCTCTT 59.958 45.833 4.27 0.00 0.00 2.85
3244 3286 2.884012 CTCTCTGTGTCTGTGTCACTCT 59.116 50.000 4.27 0.00 36.83 3.24
3245 3287 2.881513 TCTCTCTGTGTCTGTGTCACTC 59.118 50.000 4.27 0.00 36.83 3.51
3246 3288 2.884012 CTCTCTCTGTGTCTGTGTCACT 59.116 50.000 4.27 0.00 36.83 3.41
3247 3289 2.881513 TCTCTCTCTGTGTCTGTGTCAC 59.118 50.000 0.00 0.00 36.48 3.67
3248 3290 3.145286 CTCTCTCTCTGTGTCTGTGTCA 58.855 50.000 0.00 0.00 0.00 3.58
3249 3291 2.487762 CCTCTCTCTCTGTGTCTGTGTC 59.512 54.545 0.00 0.00 0.00 3.67
3250 3292 2.513753 CCTCTCTCTCTGTGTCTGTGT 58.486 52.381 0.00 0.00 0.00 3.72
3251 3293 1.818060 CCCTCTCTCTCTGTGTCTGTG 59.182 57.143 0.00 0.00 0.00 3.66
3252 3294 1.707989 TCCCTCTCTCTCTGTGTCTGT 59.292 52.381 0.00 0.00 0.00 3.41
3253 3295 2.026356 TCTCCCTCTCTCTCTGTGTCTG 60.026 54.545 0.00 0.00 0.00 3.51
3257 3299 2.806945 ACTCTCCCTCTCTCTCTGTG 57.193 55.000 0.00 0.00 0.00 3.66
3259 3301 2.507886 TGGTACTCTCCCTCTCTCTCTG 59.492 54.545 0.00 0.00 0.00 3.35
3270 3312 7.881775 ATCAATAAAATGGTTGGTACTCTCC 57.118 36.000 0.00 0.00 0.00 3.71
3300 3345 1.306148 CGACGCATCTCTACCCTGTA 58.694 55.000 0.00 0.00 0.00 2.74
3312 3357 2.514592 CATGCCCTTCCGACGCAT 60.515 61.111 0.00 0.00 43.86 4.73
3318 3363 3.831883 CATGGTCATGCCCTTCCG 58.168 61.111 0.00 0.00 36.04 4.30
3344 5946 5.252547 TGCTCTTATAATGCAGGACAACAA 58.747 37.500 8.61 0.00 32.55 2.83
3352 5954 5.009310 TGCTGGAAATGCTCTTATAATGCAG 59.991 40.000 15.33 7.84 40.18 4.41
3359 5961 3.624861 CGAACTGCTGGAAATGCTCTTAT 59.375 43.478 0.00 0.00 0.00 1.73
3364 5966 0.250901 ACCGAACTGCTGGAAATGCT 60.251 50.000 0.00 0.00 0.00 3.79
3367 5969 0.322546 GGGACCGAACTGCTGGAAAT 60.323 55.000 0.00 0.00 0.00 2.17
3369 5971 2.747686 GGGACCGAACTGCTGGAA 59.252 61.111 0.00 0.00 0.00 3.53
3391 5993 2.048312 GAAAGAACGCCGGCCTATGC 62.048 60.000 23.46 5.19 0.00 3.14
3392 5994 1.762222 CGAAAGAACGCCGGCCTATG 61.762 60.000 23.46 9.53 0.00 2.23
3393 5995 1.520787 CGAAAGAACGCCGGCCTAT 60.521 57.895 23.46 6.97 0.00 2.57
3402 6004 2.025359 GATGAGCGCCCGAAAGAACG 62.025 60.000 2.29 0.00 0.00 3.95
3403 6005 1.706287 GGATGAGCGCCCGAAAGAAC 61.706 60.000 2.29 0.00 0.00 3.01
3404 6006 1.449601 GGATGAGCGCCCGAAAGAA 60.450 57.895 2.29 0.00 0.00 2.52
3405 6007 2.186903 GGATGAGCGCCCGAAAGA 59.813 61.111 2.29 0.00 0.00 2.52
3416 6018 2.544267 GGTCTAAAAATCGCCGGATGAG 59.456 50.000 5.05 0.00 31.83 2.90
3418 6020 1.602377 GGGTCTAAAAATCGCCGGATG 59.398 52.381 5.05 0.00 31.83 3.51
3419 6021 1.489230 AGGGTCTAAAAATCGCCGGAT 59.511 47.619 5.05 0.00 0.00 4.18
3420 6022 0.906775 AGGGTCTAAAAATCGCCGGA 59.093 50.000 5.05 0.00 0.00 5.14
3422 6024 1.014352 CCAGGGTCTAAAAATCGCCG 58.986 55.000 0.00 0.00 0.00 6.46
3423 6025 1.389555 CCCAGGGTCTAAAAATCGCC 58.610 55.000 0.00 0.00 0.00 5.54
3425 6027 2.022238 GCCCCCAGGGTCTAAAAATCG 61.022 57.143 4.22 0.00 46.51 3.34
3426 6028 1.776662 GCCCCCAGGGTCTAAAAATC 58.223 55.000 4.22 0.00 46.51 2.17
3427 6029 0.033503 CGCCCCCAGGGTCTAAAAAT 60.034 55.000 4.22 0.00 46.51 1.82
3428 6030 1.135068 TCGCCCCCAGGGTCTAAAAA 61.135 55.000 4.22 0.00 46.51 1.94
3430 6032 1.307517 ATCGCCCCCAGGGTCTAAA 60.308 57.895 4.22 0.00 46.51 1.85
3432 6034 2.122989 GATCGCCCCCAGGGTCTA 60.123 66.667 4.22 0.00 46.51 2.59
3433 6035 3.943137 TTGATCGCCCCCAGGGTCT 62.943 63.158 4.22 0.00 46.51 3.85
3437 6039 3.406595 GACCTTGATCGCCCCCAGG 62.407 68.421 0.00 0.00 0.00 4.45
3438 6040 2.190578 GACCTTGATCGCCCCCAG 59.809 66.667 0.00 0.00 0.00 4.45
3439 6041 3.407967 GGACCTTGATCGCCCCCA 61.408 66.667 0.00 0.00 0.00 4.96
3441 6043 3.406595 CTGGGACCTTGATCGCCCC 62.407 68.421 0.00 0.00 39.93 5.80
3443 6045 2.514824 GCTGGGACCTTGATCGCC 60.515 66.667 0.00 0.00 0.00 5.54
3445 6047 1.153289 CTGGCTGGGACCTTGATCG 60.153 63.158 0.00 0.00 0.00 3.69
3446 6048 1.225704 CCTGGCTGGGACCTTGATC 59.774 63.158 1.84 0.00 0.00 2.92
3447 6049 2.988839 GCCTGGCTGGGACCTTGAT 61.989 63.158 12.43 0.00 36.00 2.57
3449 6051 4.748144 GGCCTGGCTGGGACCTTG 62.748 72.222 19.68 0.00 36.00 3.61
3478 6080 1.880819 AATTTGCAGCGCCTTGAGGG 61.881 55.000 2.29 0.00 35.18 4.30
3479 6081 0.037975 AAATTTGCAGCGCCTTGAGG 60.038 50.000 2.29 0.00 38.53 3.86
3481 6083 3.056304 GTTTAAATTTGCAGCGCCTTGA 58.944 40.909 2.29 0.00 0.00 3.02
3482 6084 3.059166 AGTTTAAATTTGCAGCGCCTTG 58.941 40.909 2.29 0.00 0.00 3.61
3483 6085 3.385193 AGTTTAAATTTGCAGCGCCTT 57.615 38.095 2.29 0.00 0.00 4.35
3484 6086 3.059166 CAAGTTTAAATTTGCAGCGCCT 58.941 40.909 2.29 0.00 0.00 5.52
3486 6088 2.799978 ACCAAGTTTAAATTTGCAGCGC 59.200 40.909 15.84 0.00 0.00 5.92
3487 6089 3.428534 GGACCAAGTTTAAATTTGCAGCG 59.571 43.478 15.84 6.83 0.00 5.18
3488 6090 4.376146 TGGACCAAGTTTAAATTTGCAGC 58.624 39.130 15.84 8.28 0.00 5.25
3489 6091 6.147656 GGAATGGACCAAGTTTAAATTTGCAG 59.852 38.462 15.84 7.72 0.00 4.41
3490 6092 5.994668 GGAATGGACCAAGTTTAAATTTGCA 59.005 36.000 15.84 10.17 0.00 4.08
3491 6093 5.411361 GGGAATGGACCAAGTTTAAATTTGC 59.589 40.000 15.84 5.51 0.00 3.68
3492 6094 5.637387 CGGGAATGGACCAAGTTTAAATTTG 59.363 40.000 14.66 14.66 0.00 2.32
3493 6095 5.305902 ACGGGAATGGACCAAGTTTAAATTT 59.694 36.000 0.00 0.00 0.00 1.82
3494 6096 4.836175 ACGGGAATGGACCAAGTTTAAATT 59.164 37.500 0.00 0.00 0.00 1.82
3495 6097 4.412843 ACGGGAATGGACCAAGTTTAAAT 58.587 39.130 0.00 0.00 0.00 1.40
3496 6098 3.834938 ACGGGAATGGACCAAGTTTAAA 58.165 40.909 0.00 0.00 0.00 1.52
3497 6099 3.512219 ACGGGAATGGACCAAGTTTAA 57.488 42.857 0.00 0.00 0.00 1.52
3498 6100 3.512219 AACGGGAATGGACCAAGTTTA 57.488 42.857 0.00 0.00 31.87 2.01
3499 6101 2.375014 AACGGGAATGGACCAAGTTT 57.625 45.000 0.00 0.00 31.87 2.66
3501 6103 1.546998 GGAAACGGGAATGGACCAAGT 60.547 52.381 0.00 0.00 0.00 3.16
3502 6104 1.173913 GGAAACGGGAATGGACCAAG 58.826 55.000 0.00 0.00 0.00 3.61
3504 6106 0.250989 GTGGAAACGGGAATGGACCA 60.251 55.000 0.00 0.00 0.00 4.02
3507 6109 2.362717 GTTTTGTGGAAACGGGAATGGA 59.637 45.455 0.00 0.00 38.38 3.41
3508 6110 2.749776 GTTTTGTGGAAACGGGAATGG 58.250 47.619 0.00 0.00 38.38 3.16
3518 6120 1.133407 GACTTGTGGCGTTTTGTGGAA 59.867 47.619 0.00 0.00 0.00 3.53
3519 6121 0.736053 GACTTGTGGCGTTTTGTGGA 59.264 50.000 0.00 0.00 0.00 4.02
3522 6124 1.720694 CCGGACTTGTGGCGTTTTGT 61.721 55.000 0.00 0.00 0.00 2.83
3523 6125 1.008995 CCGGACTTGTGGCGTTTTG 60.009 57.895 0.00 0.00 0.00 2.44
3524 6126 2.841160 GCCGGACTTGTGGCGTTTT 61.841 57.895 5.05 0.00 42.22 2.43
3530 6132 4.988598 ACGCAGCCGGACTTGTGG 62.989 66.667 5.05 0.00 39.22 4.17
3531 6133 3.414700 GACGCAGCCGGACTTGTG 61.415 66.667 5.05 9.44 39.22 3.33
3532 6134 3.923864 TGACGCAGCCGGACTTGT 61.924 61.111 5.05 2.82 39.22 3.16
3533 6135 3.414700 GTGACGCAGCCGGACTTG 61.415 66.667 5.05 0.18 39.22 3.16
3543 6145 2.809010 TCACGGAACTGTGACGCA 59.191 55.556 11.75 0.00 43.62 5.24
3557 6159 1.741706 CTGTGGCAAGGTGATGATCAC 59.258 52.381 16.95 16.95 46.23 3.06
3558 6160 1.352017 ACTGTGGCAAGGTGATGATCA 59.648 47.619 0.00 0.00 0.00 2.92
3559 6161 2.119801 ACTGTGGCAAGGTGATGATC 57.880 50.000 0.00 0.00 0.00 2.92
3560 6162 2.224843 TGAACTGTGGCAAGGTGATGAT 60.225 45.455 0.00 0.00 0.00 2.45
3561 6163 1.142667 TGAACTGTGGCAAGGTGATGA 59.857 47.619 0.00 0.00 0.00 2.92
3562 6164 1.538512 CTGAACTGTGGCAAGGTGATG 59.461 52.381 0.00 0.00 0.00 3.07
3563 6165 1.901591 CTGAACTGTGGCAAGGTGAT 58.098 50.000 0.00 0.00 0.00 3.06
3565 6167 1.656441 GCTGAACTGTGGCAAGGTG 59.344 57.895 0.00 0.00 0.00 4.00
3567 6169 0.957395 ATCGCTGAACTGTGGCAAGG 60.957 55.000 0.00 0.00 0.00 3.61
3568 6170 0.445436 GATCGCTGAACTGTGGCAAG 59.555 55.000 0.00 0.00 0.00 4.01
3569 6171 2.543578 GATCGCTGAACTGTGGCAA 58.456 52.632 0.00 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.