Multiple sequence alignment - TraesCS7B01G100200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G100200 chr7B 100.000 6886 0 0 1 6886 114506285 114499400 0.000000e+00 12717.0
1 TraesCS7B01G100200 chr7B 88.816 304 26 5 21 318 238503693 238503392 3.920000e-97 366.0
2 TraesCS7B01G100200 chr7B 91.875 160 10 3 4541 4698 369872871 369872713 3.230000e-53 220.0
3 TraesCS7B01G100200 chr7B 92.258 155 9 3 4541 4693 44939706 44939553 4.180000e-52 217.0
4 TraesCS7B01G100200 chr7B 87.586 145 14 3 3541 3681 424436636 424436780 1.540000e-36 165.0
5 TraesCS7B01G100200 chr7B 93.421 76 4 1 6811 6886 557178996 557178922 2.030000e-20 111.0
6 TraesCS7B01G100200 chr7D 96.089 3810 71 24 458 4253 152653320 152649575 0.000000e+00 6139.0
7 TraesCS7B01G100200 chr7D 96.143 2074 44 12 4368 6421 152649582 152647525 0.000000e+00 3354.0
8 TraesCS7B01G100200 chr7D 90.625 160 12 3 4541 4698 375400916 375400758 7.000000e-50 209.0
9 TraesCS7B01G100200 chr7D 95.575 113 5 0 6567 6679 119014631 119014519 1.530000e-41 182.0
10 TraesCS7B01G100200 chr7D 92.105 114 5 1 356 469 152653632 152653523 2.570000e-34 158.0
11 TraesCS7B01G100200 chr7D 84.672 137 11 9 4244 4372 497031651 497031517 2.020000e-25 128.0
12 TraesCS7B01G100200 chr7D 89.286 56 2 2 6479 6530 152647465 152647410 4.460000e-07 67.6
13 TraesCS7B01G100200 chr7A 95.365 1920 56 13 356 2251 153382189 153380279 0.000000e+00 3022.0
14 TraesCS7B01G100200 chr7A 93.670 1864 77 12 4689 6530 153377755 153375911 0.000000e+00 2750.0
15 TraesCS7B01G100200 chr7A 88.615 1300 73 28 2279 3542 153379696 153378436 0.000000e+00 1511.0
16 TraesCS7B01G100200 chr7A 88.565 481 27 15 3768 4222 153378433 153377955 6.030000e-155 558.0
17 TraesCS7B01G100200 chr7A 91.875 160 10 3 4541 4698 421785158 421785000 3.230000e-53 220.0
18 TraesCS7B01G100200 chr7A 93.662 142 9 0 6677 6818 153375916 153375775 5.410000e-51 213.0
19 TraesCS7B01G100200 chr7A 90.511 137 9 1 3544 3676 83784969 83784833 1.970000e-40 178.0
20 TraesCS7B01G100200 chr7A 86.755 151 15 2 3544 3690 206928931 206928782 5.530000e-36 163.0
21 TraesCS7B01G100200 chr7A 96.970 66 2 0 6819 6884 207289663 207289598 2.030000e-20 111.0
22 TraesCS7B01G100200 chr7A 93.333 75 5 0 6812 6886 392782661 392782587 2.030000e-20 111.0
23 TraesCS7B01G100200 chr7A 100.000 28 0 0 3747 3774 12811426 12811399 1.200000e-02 52.8
24 TraesCS7B01G100200 chr6B 89.172 314 30 4 7 319 674214081 674214391 8.380000e-104 388.0
25 TraesCS7B01G100200 chr6B 88.679 318 28 5 7 319 153683913 153683599 1.400000e-101 381.0
26 TraesCS7B01G100200 chr6B 86.687 323 30 7 3 318 31678379 31678695 5.110000e-91 346.0
27 TraesCS7B01G100200 chr6B 95.536 112 5 0 6568 6679 644577275 644577164 5.490000e-41 180.0
28 TraesCS7B01G100200 chr6B 93.220 118 8 0 6568 6685 585795616 585795733 2.550000e-39 174.0
29 TraesCS7B01G100200 chr4B 85.946 370 30 12 3 354 657250306 657250671 6.520000e-100 375.0
30 TraesCS7B01G100200 chr4B 96.970 66 2 0 6819 6884 664682221 664682156 2.030000e-20 111.0
31 TraesCS7B01G100200 chr4B 93.939 66 4 0 4376 4441 180995383 180995448 4.390000e-17 100.0
32 TraesCS7B01G100200 chr2B 87.926 323 31 5 3 319 5979174 5978854 2.350000e-99 374.0
33 TraesCS7B01G100200 chr2B 87.385 325 30 8 1 319 67644117 67644436 5.080000e-96 363.0
34 TraesCS7B01G100200 chr2B 90.511 137 9 1 3544 3676 660461557 660461421 1.970000e-40 178.0
35 TraesCS7B01G100200 chr3B 86.647 337 36 7 1 331 731255674 731255341 1.410000e-96 364.0
36 TraesCS7B01G100200 chr3B 84.718 373 32 12 3 354 9648184 9648552 3.950000e-92 350.0
37 TraesCS7B01G100200 chr3B 95.536 112 5 0 6568 6679 797463982 797463871 5.490000e-41 180.0
38 TraesCS7B01G100200 chr3B 93.913 115 7 0 6566 6680 820533030 820532916 2.550000e-39 174.0
39 TraesCS7B01G100200 chr3B 86.207 116 12 4 4256 4369 722303483 722303370 9.380000e-24 122.0
40 TraesCS7B01G100200 chr3B 83.740 123 20 0 4247 4369 31020536 31020414 4.360000e-22 117.0
41 TraesCS7B01G100200 chr3B 95.588 68 3 0 6817 6884 488464893 488464960 7.300000e-20 110.0
42 TraesCS7B01G100200 chr2A 92.857 154 8 3 4541 4692 141506318 141506470 3.230000e-53 220.0
43 TraesCS7B01G100200 chr2A 90.441 136 9 1 3545 3676 611937050 611937185 7.100000e-40 176.0
44 TraesCS7B01G100200 chr2A 90.370 135 9 1 3544 3674 642914031 642913897 2.550000e-39 174.0
45 TraesCS7B01G100200 chr2A 95.588 68 3 0 6819 6886 116106812 116106879 7.300000e-20 110.0
46 TraesCS7B01G100200 chr2A 95.588 68 3 0 6819 6886 615494584 615494517 7.300000e-20 110.0
47 TraesCS7B01G100200 chr2A 95.588 68 3 0 6819 6886 615513800 615513733 7.300000e-20 110.0
48 TraesCS7B01G100200 chr2A 97.959 49 1 0 4369 4417 161948627 161948675 1.230000e-12 86.1
49 TraesCS7B01G100200 chr5A 92.208 154 9 3 4541 4692 130540665 130540513 1.500000e-51 215.0
50 TraesCS7B01G100200 chr5A 84.328 134 14 4 4247 4378 219579233 219579361 2.610000e-24 124.0
51 TraesCS7B01G100200 chr6A 89.080 174 13 6 4541 4711 411770405 411770235 1.950000e-50 211.0
52 TraesCS7B01G100200 chr6A 89.431 123 9 2 4247 4369 606977663 606977781 1.200000e-32 152.0
53 TraesCS7B01G100200 chr3D 89.820 167 10 6 4533 4694 107670773 107670937 2.520000e-49 207.0
54 TraesCS7B01G100200 chr3D 89.130 138 11 1 3541 3674 422517656 422517793 1.190000e-37 169.0
55 TraesCS7B01G100200 chr3D 82.677 127 18 4 4247 4371 545837115 545836991 7.300000e-20 110.0
56 TraesCS7B01G100200 chr1B 94.828 116 4 2 6568 6682 674074473 674074359 5.490000e-41 180.0
57 TraesCS7B01G100200 chr1B 85.806 155 17 5 6525 6678 510803475 510803625 7.150000e-35 159.0
58 TraesCS7B01G100200 chr1B 100.000 30 0 0 3747 3776 230027796 230027767 1.000000e-03 56.5
59 TraesCS7B01G100200 chr2D 94.737 114 6 0 6568 6681 100314047 100314160 1.970000e-40 178.0
60 TraesCS7B01G100200 chr1A 93.966 116 7 0 6568 6683 574666442 574666557 7.100000e-40 176.0
61 TraesCS7B01G100200 chr1A 100.000 30 0 0 3747 3776 209362132 209362161 1.000000e-03 56.5
62 TraesCS7B01G100200 chr4D 89.286 140 11 1 3541 3676 482703487 482703626 9.180000e-39 172.0
63 TraesCS7B01G100200 chr4D 98.182 55 1 0 4369 4423 363923974 363923920 5.680000e-16 97.1
64 TraesCS7B01G100200 chr6D 88.333 120 8 4 4303 4416 98099997 98100116 9.310000e-29 139.0
65 TraesCS7B01G100200 chr5D 88.393 112 13 0 4305 4416 11219846 11219957 1.200000e-27 135.0
66 TraesCS7B01G100200 chr5D 86.508 126 11 4 4247 4369 548234343 548234465 4.330000e-27 134.0
67 TraesCS7B01G100200 chr1D 83.065 124 19 2 4247 4369 207012896 207013018 2.030000e-20 111.0
68 TraesCS7B01G100200 chr1D 95.522 67 3 0 6818 6884 189892211 189892145 2.630000e-19 108.0
69 TraesCS7B01G100200 chr1D 100.000 30 0 0 3747 3776 149640816 149640787 1.000000e-03 56.5
70 TraesCS7B01G100200 chr1D 100.000 30 0 0 3747 3776 392133946 392133975 1.000000e-03 56.5
71 TraesCS7B01G100200 chr3A 98.305 59 1 0 4358 4416 221948977 221949035 3.400000e-18 104.0
72 TraesCS7B01G100200 chr3A 92.308 39 2 1 3747 3784 712686244 712686282 3.000000e-03 54.7
73 TraesCS7B01G100200 chr4A 90.909 66 6 0 4376 4441 454816383 454816318 9.510000e-14 89.8
74 TraesCS7B01G100200 chr5B 86.842 76 6 4 4369 4443 263519627 263519699 1.590000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G100200 chr7B 114499400 114506285 6885 True 12717.00 12717 100.00000 1 6886 1 chr7B.!!$R2 6885
1 TraesCS7B01G100200 chr7D 152647410 152653632 6222 True 2429.65 6139 93.40575 356 6530 4 chr7D.!!$R4 6174
2 TraesCS7B01G100200 chr7A 153375775 153382189 6414 True 1610.80 3022 91.97540 356 6818 5 chr7A.!!$R7 6462

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 696 0.107165 GTACCCTGATCCAACTGCCC 60.107 60.000 0.00 0.0 0.00 5.36 F
1194 1424 0.453793 CGGCTCTGTCTCAGATTCGT 59.546 55.000 0.00 0.0 39.92 3.85 F
1225 1467 1.361271 CTGCTGCTGGTGTTGGTTG 59.639 57.895 0.00 0.0 0.00 3.77 F
2793 3606 2.612212 TGACCTTTTGCTTGAAGTCGTC 59.388 45.455 0.00 0.0 0.00 4.20 F
3019 3852 1.298859 CCACGAGCCCACTAAAGTGC 61.299 60.000 4.53 0.0 44.34 4.40 F
3102 3943 2.009774 CGTAAGAGATGGCTTGGGTTG 58.990 52.381 0.00 0.0 43.02 3.77 F
3347 4192 2.628178 CCAAGAGTATGGAGTATGCCGA 59.372 50.000 0.00 0.0 43.54 5.54 F
4365 5237 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.0 0.00 4.20 F
5795 6773 1.661341 GCTGCGGAAGTGAAGATGAT 58.339 50.000 0.00 0.0 0.00 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1976 2230 0.324943 GCACAGGGTTTCCTAGCTGA 59.675 55.0 0.00 0.0 42.67 4.26 R
2793 3606 0.537188 ACGCTCAATCTACCCACTGG 59.463 55.0 0.00 0.0 37.80 4.00 R
2937 3767 6.341316 GGAAACACACTTATCTCTGCTATGA 58.659 40.0 0.00 0.0 0.00 2.15 R
4351 5223 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.00 0.0 0.00 3.28 R
4353 5225 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.0 0.00 0.0 0.00 4.37 R
4354 5226 0.550432 AGTAGTACTCCCTCCGTCCC 59.450 60.0 0.00 0.0 0.00 4.46 R
5017 5994 2.093606 AGTAACCGGAGCTTAGAAAGGC 60.094 50.0 9.46 0.0 0.00 4.35 R
5827 6805 0.465705 TAGCCATCTCTTCCTTGCGG 59.534 55.0 0.00 0.0 0.00 5.69 R
6672 7666 0.105778 GCCCTGCTGTGAGATACTCC 59.894 60.0 0.00 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.955101 CGCGCCGACTCCTCCTAG 61.955 72.222 0.00 0.00 0.00 3.02
31 32 4.273257 GCGCCGACTCCTCCTAGC 62.273 72.222 0.00 0.00 0.00 3.42
32 33 3.597728 CGCCGACTCCTCCTAGCC 61.598 72.222 0.00 0.00 0.00 3.93
33 34 3.228017 GCCGACTCCTCCTAGCCC 61.228 72.222 0.00 0.00 0.00 5.19
34 35 2.907917 CCGACTCCTCCTAGCCCG 60.908 72.222 0.00 0.00 0.00 6.13
35 36 3.597728 CGACTCCTCCTAGCCCGC 61.598 72.222 0.00 0.00 0.00 6.13
36 37 3.597728 GACTCCTCCTAGCCCGCG 61.598 72.222 0.00 0.00 0.00 6.46
76 77 2.049802 GGCGACCTCGACGTTTGA 60.050 61.111 0.00 0.00 43.02 2.69
77 78 1.445582 GGCGACCTCGACGTTTGAT 60.446 57.895 0.00 0.00 43.02 2.57
78 79 1.683790 GGCGACCTCGACGTTTGATG 61.684 60.000 0.00 0.00 43.02 3.07
79 80 1.702299 CGACCTCGACGTTTGATGC 59.298 57.895 0.00 0.00 43.02 3.91
80 81 1.006825 CGACCTCGACGTTTGATGCA 61.007 55.000 0.00 0.00 43.02 3.96
81 82 1.359848 GACCTCGACGTTTGATGCAT 58.640 50.000 0.00 0.00 0.00 3.96
82 83 1.732259 GACCTCGACGTTTGATGCATT 59.268 47.619 0.00 0.00 0.00 3.56
83 84 1.732259 ACCTCGACGTTTGATGCATTC 59.268 47.619 0.00 0.00 0.00 2.67
84 85 1.062587 CCTCGACGTTTGATGCATTCC 59.937 52.381 0.00 0.00 0.00 3.01
85 86 2.002586 CTCGACGTTTGATGCATTCCT 58.997 47.619 0.00 0.00 0.00 3.36
86 87 2.416547 CTCGACGTTTGATGCATTCCTT 59.583 45.455 0.00 0.00 0.00 3.36
87 88 2.159430 TCGACGTTTGATGCATTCCTTG 59.841 45.455 0.00 0.00 0.00 3.61
95 96 2.870372 GCATTCCTTGCGCGTCTT 59.130 55.556 8.43 0.00 42.54 3.01
96 97 1.210155 GCATTCCTTGCGCGTCTTT 59.790 52.632 8.43 0.00 42.54 2.52
97 98 0.387239 GCATTCCTTGCGCGTCTTTT 60.387 50.000 8.43 0.00 42.54 2.27
98 99 1.606606 CATTCCTTGCGCGTCTTTTC 58.393 50.000 8.43 0.00 0.00 2.29
99 100 1.197721 CATTCCTTGCGCGTCTTTTCT 59.802 47.619 8.43 0.00 0.00 2.52
100 101 1.305201 TTCCTTGCGCGTCTTTTCTT 58.695 45.000 8.43 0.00 0.00 2.52
101 102 1.305201 TCCTTGCGCGTCTTTTCTTT 58.695 45.000 8.43 0.00 0.00 2.52
102 103 1.673920 TCCTTGCGCGTCTTTTCTTTT 59.326 42.857 8.43 0.00 0.00 2.27
103 104 2.098443 TCCTTGCGCGTCTTTTCTTTTT 59.902 40.909 8.43 0.00 0.00 1.94
120 121 3.357166 TTTTTGTGCGCCGAACTATTT 57.643 38.095 4.18 0.00 0.00 1.40
121 122 2.323939 TTTGTGCGCCGAACTATTTG 57.676 45.000 4.18 0.00 0.00 2.32
122 123 0.109964 TTGTGCGCCGAACTATTTGC 60.110 50.000 4.18 0.00 0.00 3.68
123 124 0.953471 TGTGCGCCGAACTATTTGCT 60.953 50.000 4.18 0.00 0.00 3.91
124 125 0.168128 GTGCGCCGAACTATTTGCTT 59.832 50.000 4.18 0.00 0.00 3.91
125 126 0.167908 TGCGCCGAACTATTTGCTTG 59.832 50.000 4.18 0.00 0.00 4.01
126 127 0.168128 GCGCCGAACTATTTGCTTGT 59.832 50.000 0.00 0.00 0.00 3.16
127 128 1.790481 GCGCCGAACTATTTGCTTGTC 60.790 52.381 0.00 0.00 0.00 3.18
128 129 1.202031 CGCCGAACTATTTGCTTGTCC 60.202 52.381 0.00 0.00 0.00 4.02
129 130 2.084546 GCCGAACTATTTGCTTGTCCT 58.915 47.619 0.00 0.00 0.00 3.85
130 131 2.488153 GCCGAACTATTTGCTTGTCCTT 59.512 45.455 0.00 0.00 0.00 3.36
131 132 3.057526 GCCGAACTATTTGCTTGTCCTTT 60.058 43.478 0.00 0.00 0.00 3.11
132 133 4.723248 CCGAACTATTTGCTTGTCCTTTC 58.277 43.478 0.00 0.00 0.00 2.62
133 134 4.215399 CCGAACTATTTGCTTGTCCTTTCA 59.785 41.667 0.00 0.00 0.00 2.69
134 135 5.106157 CCGAACTATTTGCTTGTCCTTTCAT 60.106 40.000 0.00 0.00 0.00 2.57
135 136 6.381801 CGAACTATTTGCTTGTCCTTTCATT 58.618 36.000 0.00 0.00 0.00 2.57
136 137 6.863126 CGAACTATTTGCTTGTCCTTTCATTT 59.137 34.615 0.00 0.00 0.00 2.32
137 138 7.148918 CGAACTATTTGCTTGTCCTTTCATTTG 60.149 37.037 0.00 0.00 0.00 2.32
138 139 7.288810 ACTATTTGCTTGTCCTTTCATTTGA 57.711 32.000 0.00 0.00 0.00 2.69
139 140 7.899973 ACTATTTGCTTGTCCTTTCATTTGAT 58.100 30.769 0.00 0.00 0.00 2.57
140 141 8.031277 ACTATTTGCTTGTCCTTTCATTTGATC 58.969 33.333 0.00 0.00 0.00 2.92
141 142 4.424061 TGCTTGTCCTTTCATTTGATCG 57.576 40.909 0.00 0.00 0.00 3.69
142 143 3.174375 GCTTGTCCTTTCATTTGATCGC 58.826 45.455 0.00 0.00 0.00 4.58
143 144 3.762779 CTTGTCCTTTCATTTGATCGCC 58.237 45.455 0.00 0.00 0.00 5.54
144 145 1.737236 TGTCCTTTCATTTGATCGCCG 59.263 47.619 0.00 0.00 0.00 6.46
145 146 2.006888 GTCCTTTCATTTGATCGCCGA 58.993 47.619 0.00 0.00 0.00 5.54
146 147 2.418628 GTCCTTTCATTTGATCGCCGAA 59.581 45.455 0.00 0.00 0.00 4.30
147 148 2.418628 TCCTTTCATTTGATCGCCGAAC 59.581 45.455 0.00 0.00 0.00 3.95
148 149 2.420022 CCTTTCATTTGATCGCCGAACT 59.580 45.455 0.00 0.00 0.00 3.01
149 150 3.419915 CTTTCATTTGATCGCCGAACTG 58.580 45.455 0.00 0.00 0.00 3.16
150 151 2.093306 TCATTTGATCGCCGAACTGT 57.907 45.000 0.00 0.00 0.00 3.55
151 152 1.731709 TCATTTGATCGCCGAACTGTG 59.268 47.619 0.00 0.00 0.00 3.66
152 153 1.086696 ATTTGATCGCCGAACTGTGG 58.913 50.000 0.00 0.00 0.00 4.17
159 160 4.701663 CCGAACTGTGGCACTGAT 57.298 55.556 28.11 18.27 0.00 2.90
160 161 2.460330 CCGAACTGTGGCACTGATC 58.540 57.895 28.11 23.76 0.00 2.92
161 162 1.354337 CCGAACTGTGGCACTGATCG 61.354 60.000 34.00 34.00 40.25 3.69
162 163 1.790387 GAACTGTGGCACTGATCGC 59.210 57.895 28.11 11.76 0.00 4.58
168 169 2.125512 GGCACTGATCGCCGAACT 60.126 61.111 0.00 0.00 40.35 3.01
169 170 1.141019 GGCACTGATCGCCGAACTA 59.859 57.895 0.00 0.00 40.35 2.24
170 171 0.249489 GGCACTGATCGCCGAACTAT 60.249 55.000 0.00 0.00 40.35 2.12
171 172 1.571919 GCACTGATCGCCGAACTATT 58.428 50.000 0.00 0.00 0.00 1.73
172 173 1.258982 GCACTGATCGCCGAACTATTG 59.741 52.381 0.00 0.00 0.00 1.90
173 174 1.258982 CACTGATCGCCGAACTATTGC 59.741 52.381 0.00 0.00 0.00 3.56
180 181 2.863658 GCCGAACTATTGCGATGATC 57.136 50.000 0.00 0.00 0.00 2.92
181 182 1.125021 GCCGAACTATTGCGATGATCG 59.875 52.381 11.02 11.02 43.89 3.69
192 193 1.280982 CGATGATCGCCGGATTATGG 58.719 55.000 5.05 0.00 29.77 2.74
198 199 4.456806 GCCGGATTATGGCGTTCT 57.543 55.556 5.05 0.00 43.70 3.01
199 200 2.702847 GCCGGATTATGGCGTTCTT 58.297 52.632 5.05 0.00 43.70 2.52
200 201 1.021968 GCCGGATTATGGCGTTCTTT 58.978 50.000 5.05 0.00 43.70 2.52
201 202 1.404035 GCCGGATTATGGCGTTCTTTT 59.596 47.619 5.05 0.00 43.70 2.27
202 203 2.159296 GCCGGATTATGGCGTTCTTTTT 60.159 45.455 5.05 0.00 43.70 1.94
203 204 3.434637 CCGGATTATGGCGTTCTTTTTG 58.565 45.455 0.00 0.00 0.00 2.44
204 205 3.127895 CCGGATTATGGCGTTCTTTTTGA 59.872 43.478 0.00 0.00 0.00 2.69
205 206 4.380023 CCGGATTATGGCGTTCTTTTTGAA 60.380 41.667 0.00 0.00 0.00 2.69
206 207 5.157781 CGGATTATGGCGTTCTTTTTGAAA 58.842 37.500 0.00 0.00 36.30 2.69
207 208 5.060446 CGGATTATGGCGTTCTTTTTGAAAC 59.940 40.000 0.00 0.00 36.30 2.78
208 209 5.060446 GGATTATGGCGTTCTTTTTGAAACG 59.940 40.000 3.46 3.46 36.30 3.60
209 210 2.196295 TGGCGTTCTTTTTGAAACGG 57.804 45.000 9.34 0.00 36.30 4.44
210 211 1.202313 TGGCGTTCTTTTTGAAACGGG 60.202 47.619 9.34 0.00 36.30 5.28
211 212 1.065851 GGCGTTCTTTTTGAAACGGGA 59.934 47.619 9.34 0.00 36.30 5.14
212 213 2.479901 GGCGTTCTTTTTGAAACGGGAA 60.480 45.455 9.34 0.00 36.30 3.97
213 214 2.532723 GCGTTCTTTTTGAAACGGGAAC 59.467 45.455 9.34 0.00 36.30 3.62
231 232 6.677781 GGGAACGATCAAGTTTGAATATGA 57.322 37.500 0.00 0.00 41.13 2.15
232 233 6.719365 GGGAACGATCAAGTTTGAATATGAG 58.281 40.000 0.00 0.00 41.13 2.90
233 234 6.538742 GGGAACGATCAAGTTTGAATATGAGA 59.461 38.462 0.00 0.00 41.13 3.27
234 235 7.227512 GGGAACGATCAAGTTTGAATATGAGAT 59.772 37.037 0.00 0.00 41.13 2.75
235 236 8.066595 GGAACGATCAAGTTTGAATATGAGATG 58.933 37.037 0.00 0.00 41.13 2.90
236 237 6.952743 ACGATCAAGTTTGAATATGAGATGC 58.047 36.000 0.00 0.00 41.13 3.91
237 238 6.069563 CGATCAAGTTTGAATATGAGATGCG 58.930 40.000 0.00 0.00 41.13 4.73
238 239 6.292542 CGATCAAGTTTGAATATGAGATGCGT 60.293 38.462 0.00 0.00 41.13 5.24
239 240 6.110543 TCAAGTTTGAATATGAGATGCGTG 57.889 37.500 0.00 0.00 33.55 5.34
240 241 5.065090 TCAAGTTTGAATATGAGATGCGTGG 59.935 40.000 0.00 0.00 33.55 4.94
241 242 4.517285 AGTTTGAATATGAGATGCGTGGT 58.483 39.130 0.00 0.00 0.00 4.16
242 243 4.943705 AGTTTGAATATGAGATGCGTGGTT 59.056 37.500 0.00 0.00 0.00 3.67
243 244 4.880886 TTGAATATGAGATGCGTGGTTG 57.119 40.909 0.00 0.00 0.00 3.77
244 245 3.205338 TGAATATGAGATGCGTGGTTGG 58.795 45.455 0.00 0.00 0.00 3.77
245 246 2.260844 ATATGAGATGCGTGGTTGGG 57.739 50.000 0.00 0.00 0.00 4.12
246 247 0.180171 TATGAGATGCGTGGTTGGGG 59.820 55.000 0.00 0.00 0.00 4.96
247 248 3.134127 GAGATGCGTGGTTGGGGC 61.134 66.667 0.00 0.00 0.00 5.80
248 249 4.740822 AGATGCGTGGTTGGGGCC 62.741 66.667 0.00 0.00 0.00 5.80
249 250 4.740822 GATGCGTGGTTGGGGCCT 62.741 66.667 0.84 0.00 0.00 5.19
250 251 4.299796 ATGCGTGGTTGGGGCCTT 62.300 61.111 0.84 0.00 0.00 4.35
264 265 4.109675 CCTTGGGGGCGGTACCTG 62.110 72.222 10.90 4.84 39.10 4.00
265 266 4.109675 CTTGGGGGCGGTACCTGG 62.110 72.222 10.90 0.00 39.10 4.45
272 273 3.547513 GCGGTACCTGGGGGCTAG 61.548 72.222 10.90 0.00 35.63 3.42
273 274 2.842936 CGGTACCTGGGGGCTAGG 60.843 72.222 10.90 0.00 41.22 3.02
274 275 2.447959 GGTACCTGGGGGCTAGGG 60.448 72.222 4.06 0.00 39.71 3.53
275 276 3.169242 GTACCTGGGGGCTAGGGC 61.169 72.222 0.00 0.00 39.71 5.19
285 286 4.858680 GCTAGGGCCTTGGTCGCC 62.859 72.222 13.45 0.00 46.29 5.54
304 305 2.225382 CCCCGGGGACTAAAAATTGT 57.775 50.000 38.41 0.00 37.50 2.71
305 306 2.097036 CCCCGGGGACTAAAAATTGTC 58.903 52.381 38.41 0.00 37.50 3.18
306 307 1.741145 CCCGGGGACTAAAAATTGTCG 59.259 52.381 14.71 0.00 34.31 4.35
307 308 1.741145 CCGGGGACTAAAAATTGTCGG 59.259 52.381 0.00 0.00 34.31 4.79
308 309 1.741145 CGGGGACTAAAAATTGTCGGG 59.259 52.381 0.00 0.00 34.31 5.14
309 310 2.799017 GGGGACTAAAAATTGTCGGGT 58.201 47.619 0.00 0.00 34.31 5.28
310 311 2.490509 GGGGACTAAAAATTGTCGGGTG 59.509 50.000 0.00 0.00 34.31 4.61
311 312 2.490509 GGGACTAAAAATTGTCGGGTGG 59.509 50.000 0.00 0.00 34.31 4.61
312 313 3.414269 GGACTAAAAATTGTCGGGTGGA 58.586 45.455 0.00 0.00 34.31 4.02
313 314 3.189910 GGACTAAAAATTGTCGGGTGGAC 59.810 47.826 0.00 0.00 46.27 4.02
342 343 4.697756 CGCTGGAGGGCCAAACGA 62.698 66.667 6.18 0.00 45.41 3.85
343 344 2.747855 GCTGGAGGGCCAAACGAG 60.748 66.667 6.18 4.69 45.41 4.18
344 345 2.750350 CTGGAGGGCCAAACGAGT 59.250 61.111 6.18 0.00 45.41 4.18
345 346 1.672356 CTGGAGGGCCAAACGAGTG 60.672 63.158 6.18 0.00 45.41 3.51
346 347 2.359975 GGAGGGCCAAACGAGTGG 60.360 66.667 6.18 4.96 42.05 4.00
347 348 2.747686 GAGGGCCAAACGAGTGGA 59.252 61.111 6.18 0.00 41.65 4.02
348 349 1.376037 GAGGGCCAAACGAGTGGAG 60.376 63.158 6.18 0.00 41.65 3.86
349 350 1.827399 GAGGGCCAAACGAGTGGAGA 61.827 60.000 6.18 0.00 41.65 3.71
350 351 1.201429 AGGGCCAAACGAGTGGAGAT 61.201 55.000 6.18 0.00 41.65 2.75
351 352 1.026718 GGGCCAAACGAGTGGAGATG 61.027 60.000 4.39 0.00 41.65 2.90
352 353 1.648467 GGCCAAACGAGTGGAGATGC 61.648 60.000 12.44 0.00 41.65 3.91
353 354 0.674895 GCCAAACGAGTGGAGATGCT 60.675 55.000 12.44 0.00 41.65 3.79
354 355 1.405526 GCCAAACGAGTGGAGATGCTA 60.406 52.381 12.44 0.00 41.65 3.49
384 385 4.526970 ACAGAGGAAAAACTCAAAGCTGA 58.473 39.130 0.00 0.00 39.97 4.26
473 696 0.107165 GTACCCTGATCCAACTGCCC 60.107 60.000 0.00 0.00 0.00 5.36
894 1124 1.007734 GTGACCGAGACGTTCTGCA 60.008 57.895 0.00 0.00 0.00 4.41
984 1214 2.837291 CAGCGGAGGAGGAGGAGG 60.837 72.222 0.00 0.00 0.00 4.30
985 1215 3.024356 AGCGGAGGAGGAGGAGGA 61.024 66.667 0.00 0.00 0.00 3.71
986 1216 2.520741 GCGGAGGAGGAGGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
1050 1280 3.319198 GACAAGGGGGACTCGGCA 61.319 66.667 0.00 0.00 0.00 5.69
1146 1376 1.153549 GATCAAGAGCGCCTTCCGT 60.154 57.895 2.29 0.00 39.71 4.69
1168 1398 0.745845 CATGGCGCTCAAGTAAGGCT 60.746 55.000 7.64 0.00 0.00 4.58
1194 1424 0.453793 CGGCTCTGTCTCAGATTCGT 59.546 55.000 0.00 0.00 39.92 3.85
1216 1446 2.889154 TATCGTCGTGCTGCTGCTGG 62.889 60.000 17.00 8.44 40.48 4.85
1221 1463 2.333938 GTGCTGCTGCTGGTGTTG 59.666 61.111 17.00 0.00 40.48 3.33
1222 1464 2.908428 TGCTGCTGCTGGTGTTGG 60.908 61.111 17.00 0.00 40.48 3.77
1223 1465 2.908940 GCTGCTGCTGGTGTTGGT 60.909 61.111 8.53 0.00 36.03 3.67
1224 1466 2.492773 GCTGCTGCTGGTGTTGGTT 61.493 57.895 8.53 0.00 36.03 3.67
1225 1467 1.361271 CTGCTGCTGGTGTTGGTTG 59.639 57.895 0.00 0.00 0.00 3.77
1402 1645 4.299155 GTGTTTAGGCTTTTCTTTCCAGC 58.701 43.478 0.00 0.00 0.00 4.85
1472 1716 6.791867 TGTAGTGGTAGCTTGATGTAGAAT 57.208 37.500 0.00 0.00 0.00 2.40
1507 1761 6.851222 CTGATCTCAGTGTTGTTGTTACTT 57.149 37.500 0.00 0.00 39.09 2.24
1970 2224 7.578571 GCATTAAATGGGTCTATTGTGGTTTCA 60.579 37.037 0.00 0.00 0.00 2.69
2546 3358 4.673298 TAGGTGTGTGGCGTGCCG 62.673 66.667 6.37 0.00 39.42 5.69
2608 3420 6.656693 CCTATGAAGGTTTCACAAGATCACTT 59.343 38.462 0.00 0.00 43.48 3.16
2609 3421 7.361542 CCTATGAAGGTTTCACAAGATCACTTG 60.362 40.741 8.18 8.18 46.12 3.16
2730 3543 4.956075 CCAAACAGGCCCTTTATTCATACT 59.044 41.667 0.00 0.00 0.00 2.12
2791 3604 2.614057 ACTGACCTTTTGCTTGAAGTCG 59.386 45.455 0.00 0.00 0.00 4.18
2792 3605 2.614057 CTGACCTTTTGCTTGAAGTCGT 59.386 45.455 0.00 0.00 0.00 4.34
2793 3606 2.612212 TGACCTTTTGCTTGAAGTCGTC 59.388 45.455 0.00 0.00 0.00 4.20
2937 3767 6.949117 AATGAGTCATATAAGGCCATCTCT 57.051 37.500 5.01 0.00 0.00 3.10
3019 3852 1.298859 CCACGAGCCCACTAAAGTGC 61.299 60.000 4.53 0.00 44.34 4.40
3102 3943 2.009774 CGTAAGAGATGGCTTGGGTTG 58.990 52.381 0.00 0.00 43.02 3.77
3117 3958 4.764050 TGGGTTGTCTACTTGTCTTTGA 57.236 40.909 0.00 0.00 0.00 2.69
3347 4192 2.628178 CCAAGAGTATGGAGTATGCCGA 59.372 50.000 0.00 0.00 43.54 5.54
3431 4276 9.412460 ACCATGATGTGATAGTGACAATTATTT 57.588 29.630 0.00 0.00 0.00 1.40
3457 4302 8.742554 TGTATGCTGTGATACGAGTTATATTG 57.257 34.615 0.00 0.00 32.30 1.90
3591 4436 3.005050 CAGCCTCTTGCAGAAATGTTTGA 59.995 43.478 0.00 0.00 44.83 2.69
3613 4458 5.597182 TGAAATGGCTTCGTACTATAGACCT 59.403 40.000 6.78 0.00 36.78 3.85
3698 4543 6.456795 TGTGATGTACATCTACTTCCTCTG 57.543 41.667 30.67 0.00 38.60 3.35
3699 4544 5.952347 TGTGATGTACATCTACTTCCTCTGT 59.048 40.000 30.67 0.00 38.60 3.41
3700 4545 7.116736 TGTGATGTACATCTACTTCCTCTGTA 58.883 38.462 30.67 8.23 38.60 2.74
3701 4546 7.614192 TGTGATGTACATCTACTTCCTCTGTAA 59.386 37.037 30.67 7.83 38.60 2.41
3702 4547 8.467598 GTGATGTACATCTACTTCCTCTGTAAA 58.532 37.037 30.67 7.24 38.60 2.01
3703 4548 9.031537 TGATGTACATCTACTTCCTCTGTAAAA 57.968 33.333 30.67 6.89 38.60 1.52
3710 4555 9.535878 CATCTACTTCCTCTGTAAAATACTTCC 57.464 37.037 0.00 0.00 0.00 3.46
3711 4556 8.896722 TCTACTTCCTCTGTAAAATACTTCCT 57.103 34.615 0.00 0.00 0.00 3.36
3712 4557 8.968969 TCTACTTCCTCTGTAAAATACTTCCTC 58.031 37.037 0.00 0.00 0.00 3.71
3713 4558 7.800300 ACTTCCTCTGTAAAATACTTCCTCT 57.200 36.000 0.00 0.00 0.00 3.69
3832 4677 7.161715 TGACAAAGCCCTAATATTATTCCCT 57.838 36.000 0.00 0.00 0.00 4.20
3833 4678 7.004086 TGACAAAGCCCTAATATTATTCCCTG 58.996 38.462 0.00 0.00 0.00 4.45
3834 4679 5.775195 ACAAAGCCCTAATATTATTCCCTGC 59.225 40.000 0.00 0.00 0.00 4.85
3835 4680 4.592997 AGCCCTAATATTATTCCCTGCC 57.407 45.455 0.00 0.00 0.00 4.85
3836 4681 4.187124 AGCCCTAATATTATTCCCTGCCT 58.813 43.478 0.00 0.00 0.00 4.75
3837 4682 4.228438 AGCCCTAATATTATTCCCTGCCTC 59.772 45.833 0.00 0.00 0.00 4.70
3838 4683 4.628959 GCCCTAATATTATTCCCTGCCTCC 60.629 50.000 0.00 0.00 0.00 4.30
3839 4684 4.079730 CCCTAATATTATTCCCTGCCTCCC 60.080 50.000 0.00 0.00 0.00 4.30
4137 5007 7.563556 ACCAAACTTATTTCTCTCCTTTTTCCA 59.436 33.333 0.00 0.00 0.00 3.53
4247 5119 9.134055 ACTCCCTCTGTAATTACTCACTATAAC 57.866 37.037 16.33 0.00 0.00 1.89
4248 5120 9.357161 CTCCCTCTGTAATTACTCACTATAACT 57.643 37.037 16.33 0.00 0.00 2.24
4249 5121 9.352191 TCCCTCTGTAATTACTCACTATAACTC 57.648 37.037 16.33 0.00 0.00 3.01
4250 5122 8.578151 CCCTCTGTAATTACTCACTATAACTCC 58.422 40.741 16.33 0.00 0.00 3.85
4251 5123 9.357161 CCTCTGTAATTACTCACTATAACTCCT 57.643 37.037 16.33 0.00 0.00 3.69
4254 5126 9.968870 CTGTAATTACTCACTATAACTCCTTCC 57.031 37.037 16.33 0.00 0.00 3.46
4255 5127 8.627403 TGTAATTACTCACTATAACTCCTTCCG 58.373 37.037 16.33 0.00 0.00 4.30
4256 5128 7.657023 AATTACTCACTATAACTCCTTCCGT 57.343 36.000 0.00 0.00 0.00 4.69
4257 5129 6.690194 TTACTCACTATAACTCCTTCCGTC 57.310 41.667 0.00 0.00 0.00 4.79
4258 5130 3.952967 ACTCACTATAACTCCTTCCGTCC 59.047 47.826 0.00 0.00 0.00 4.79
4259 5131 3.294214 TCACTATAACTCCTTCCGTCCC 58.706 50.000 0.00 0.00 0.00 4.46
4260 5132 3.028850 CACTATAACTCCTTCCGTCCCA 58.971 50.000 0.00 0.00 0.00 4.37
4261 5133 3.449737 CACTATAACTCCTTCCGTCCCAA 59.550 47.826 0.00 0.00 0.00 4.12
4262 5134 4.081309 CACTATAACTCCTTCCGTCCCAAA 60.081 45.833 0.00 0.00 0.00 3.28
4263 5135 4.533311 ACTATAACTCCTTCCGTCCCAAAA 59.467 41.667 0.00 0.00 0.00 2.44
4264 5136 2.971901 AACTCCTTCCGTCCCAAAAT 57.028 45.000 0.00 0.00 0.00 1.82
4265 5137 5.703730 ATAACTCCTTCCGTCCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
4266 5138 4.376225 AACTCCTTCCGTCCCAAAATAA 57.624 40.909 0.00 0.00 0.00 1.40
4267 5139 3.951663 ACTCCTTCCGTCCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
4268 5140 3.329814 ACTCCTTCCGTCCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
4269 5141 3.681593 TCCTTCCGTCCCAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
4270 5142 3.073356 TCCTTCCGTCCCAAAATAAGTGT 59.927 43.478 0.00 0.00 0.00 3.55
4271 5143 3.439129 CCTTCCGTCCCAAAATAAGTGTC 59.561 47.826 0.00 0.00 0.00 3.67
4272 5144 4.324267 CTTCCGTCCCAAAATAAGTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
4273 5145 3.934068 TCCGTCCCAAAATAAGTGTCTC 58.066 45.455 0.00 0.00 0.00 3.36
4274 5146 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
4275 5147 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4276 5148 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
4277 5149 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
4278 5150 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
4279 5151 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
4280 5152 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
4281 5153 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4282 5154 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4283 5155 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4284 5156 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4288 5160 8.828688 ATAAGTGTCTCAACTTTGTACTAACC 57.171 34.615 0.00 0.00 40.77 2.85
4289 5161 6.481434 AGTGTCTCAACTTTGTACTAACCT 57.519 37.500 0.00 0.00 0.00 3.50
4290 5162 6.885922 AGTGTCTCAACTTTGTACTAACCTT 58.114 36.000 0.00 0.00 0.00 3.50
4291 5163 8.015185 AGTGTCTCAACTTTGTACTAACCTTA 57.985 34.615 0.00 0.00 0.00 2.69
4292 5164 8.142551 AGTGTCTCAACTTTGTACTAACCTTAG 58.857 37.037 0.00 0.00 36.82 2.18
4293 5165 7.924947 GTGTCTCAACTTTGTACTAACCTTAGT 59.075 37.037 3.29 3.29 45.39 2.24
4294 5166 9.135189 TGTCTCAACTTTGTACTAACCTTAGTA 57.865 33.333 1.45 1.45 43.36 1.82
4344 5216 6.846325 ACAAAGTTGTACTAAGCTTGAGAC 57.154 37.500 9.86 4.39 40.16 3.36
4345 5217 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
4346 5218 6.258068 ACAAAGTTGTACTAAGCTTGAGACAC 59.742 38.462 9.86 7.18 40.16 3.67
4347 5219 5.793030 AGTTGTACTAAGCTTGAGACACT 57.207 39.130 9.86 7.29 0.00 3.55
4348 5220 6.163135 AGTTGTACTAAGCTTGAGACACTT 57.837 37.500 9.86 0.00 0.00 3.16
4349 5221 7.286215 AGTTGTACTAAGCTTGAGACACTTA 57.714 36.000 9.86 0.00 0.00 2.24
4350 5222 7.897864 AGTTGTACTAAGCTTGAGACACTTAT 58.102 34.615 9.86 0.00 0.00 1.73
4351 5223 8.368668 AGTTGTACTAAGCTTGAGACACTTATT 58.631 33.333 9.86 0.00 0.00 1.40
4352 5224 8.989980 GTTGTACTAAGCTTGAGACACTTATTT 58.010 33.333 9.86 0.00 0.00 1.40
4353 5225 9.555727 TTGTACTAAGCTTGAGACACTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
4354 5226 8.988934 TGTACTAAGCTTGAGACACTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
4355 5227 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
4356 5228 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
4357 5229 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
4358 5230 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
4359 5231 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
4360 5232 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
4361 5233 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
4362 5234 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
4363 5235 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4364 5236 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4365 5237 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4366 5238 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4621 5580 5.640732 ACTGAAATGAGTGAACAAACACAC 58.359 37.500 0.00 0.00 42.45 3.82
4978 5955 6.345920 ACTCAGTGAGTTTACAAAAGTTCG 57.654 37.500 20.34 0.00 40.28 3.95
5017 5994 5.501715 CAAGTGATTCGATGGTATTTTCCG 58.498 41.667 0.00 0.00 0.00 4.30
5180 6157 4.277174 TGTCGTTTATTGATTGCTGTGGTT 59.723 37.500 0.00 0.00 0.00 3.67
5320 6297 4.529109 AAAGGAGAAGCTACAGAGTGTC 57.471 45.455 0.00 0.00 0.00 3.67
5449 6427 2.125326 CACATCAGCATGGCAGGGG 61.125 63.158 0.00 0.00 36.16 4.79
5462 6440 4.601406 TGGCAGGGGTACATTCTTAAAT 57.399 40.909 0.00 0.00 0.00 1.40
5597 6575 2.431057 GTCTGATCTGGGTATTCGTGGT 59.569 50.000 0.00 0.00 0.00 4.16
5621 6599 4.362932 TCTGTAGATTGACGAGCTTCTG 57.637 45.455 0.00 0.00 0.00 3.02
5681 6659 2.967201 TCCACCTCTAAAACGGACTTCA 59.033 45.455 0.00 0.00 0.00 3.02
5702 6680 9.692325 ACTTCAAGCAGGAATAAATCTAAATCT 57.308 29.630 0.00 0.00 0.00 2.40
5795 6773 1.661341 GCTGCGGAAGTGAAGATGAT 58.339 50.000 0.00 0.00 0.00 2.45
5827 6805 3.710326 AAAGAAAACCAAAGAGCGGTC 57.290 42.857 6.48 6.48 34.99 4.79
5829 6807 0.237498 GAAAACCAAAGAGCGGTCCG 59.763 55.000 11.73 6.99 34.99 4.79
5897 6875 5.229281 AAGCCATGCTGACCATAATGGTAC 61.229 45.833 0.00 0.00 45.32 3.34
5962 6940 0.107312 ATCATCCTCTGCACCACAGC 60.107 55.000 0.00 0.00 46.76 4.40
6011 6989 2.921754 CTGTAGGTAAGCGTACAAGTGC 59.078 50.000 11.95 0.56 42.88 4.40
6078 7056 3.259902 CCGTTACCTCTTTCCTTAGTGC 58.740 50.000 0.00 0.00 0.00 4.40
6217 7196 8.879759 GTTCCATATTCTTTCGAGTGTGATAAA 58.120 33.333 0.00 0.00 0.00 1.40
6231 7210 9.986833 CGAGTGTGATAAATGTCAATTTTGATA 57.013 29.630 0.00 0.00 39.73 2.15
6288 7267 2.002586 CTCGTCCCTGTTGCACATTAG 58.997 52.381 0.00 0.00 0.00 1.73
6327 7306 4.503007 CGACTCCTGATGTGTAATTAACCG 59.497 45.833 0.00 0.00 0.00 4.44
6438 7432 8.748380 AAAAAGATGCAGTTAACATTTCTAGC 57.252 30.769 8.61 1.06 0.00 3.42
6456 7450 9.974980 ATTTCTAGCGGAAAGAAAAACATTTAA 57.025 25.926 12.03 0.00 45.61 1.52
6516 7510 5.941948 AACAAAGACACAAGGTACATAGC 57.058 39.130 0.00 0.00 0.00 2.97
6517 7511 5.228945 ACAAAGACACAAGGTACATAGCT 57.771 39.130 0.00 0.00 35.17 3.32
6518 7512 5.621193 ACAAAGACACAAGGTACATAGCTT 58.379 37.500 0.00 0.00 44.08 3.74
6528 7522 6.561519 AAGGTACATAGCTTGGTTGATACT 57.438 37.500 2.62 0.00 41.92 2.12
6529 7523 6.163135 AGGTACATAGCTTGGTTGATACTC 57.837 41.667 0.00 0.00 0.00 2.59
6530 7524 5.070580 AGGTACATAGCTTGGTTGATACTCC 59.929 44.000 0.00 0.00 0.00 3.85
6531 7525 4.423625 ACATAGCTTGGTTGATACTCCC 57.576 45.455 0.00 0.00 0.00 4.30
6532 7526 4.040755 ACATAGCTTGGTTGATACTCCCT 58.959 43.478 0.00 0.00 0.00 4.20
6533 7527 4.101741 ACATAGCTTGGTTGATACTCCCTC 59.898 45.833 0.00 0.00 0.00 4.30
6534 7528 1.840635 AGCTTGGTTGATACTCCCTCC 59.159 52.381 0.00 0.00 0.00 4.30
6535 7529 1.473434 GCTTGGTTGATACTCCCTCCG 60.473 57.143 0.00 0.00 0.00 4.63
6536 7530 1.831736 CTTGGTTGATACTCCCTCCGT 59.168 52.381 0.00 0.00 0.00 4.69
6537 7531 1.481871 TGGTTGATACTCCCTCCGTC 58.518 55.000 0.00 0.00 0.00 4.79
6538 7532 1.006758 TGGTTGATACTCCCTCCGTCT 59.993 52.381 0.00 0.00 0.00 4.18
6539 7533 1.409427 GGTTGATACTCCCTCCGTCTG 59.591 57.143 0.00 0.00 0.00 3.51
6540 7534 2.376109 GTTGATACTCCCTCCGTCTGA 58.624 52.381 0.00 0.00 0.00 3.27
6541 7535 2.758979 GTTGATACTCCCTCCGTCTGAA 59.241 50.000 0.00 0.00 0.00 3.02
6542 7536 3.095912 TGATACTCCCTCCGTCTGAAA 57.904 47.619 0.00 0.00 0.00 2.69
6543 7537 3.437213 TGATACTCCCTCCGTCTGAAAA 58.563 45.455 0.00 0.00 0.00 2.29
6544 7538 4.030913 TGATACTCCCTCCGTCTGAAAAT 58.969 43.478 0.00 0.00 0.00 1.82
6545 7539 5.205821 TGATACTCCCTCCGTCTGAAAATA 58.794 41.667 0.00 0.00 0.00 1.40
6546 7540 3.889520 ACTCCCTCCGTCTGAAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
6547 7541 3.442076 ACTCCCTCCGTCTGAAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
6548 7542 3.838903 ACTCCCTCCGTCTGAAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
6549 7543 4.184629 CTCCCTCCGTCTGAAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
6550 7544 3.581332 TCCCTCCGTCTGAAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
6551 7545 3.933332 CCCTCCGTCTGAAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
6552 7546 4.562757 CCCTCCGTCTGAAAATACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
6553 7547 5.178797 CCTCCGTCTGAAAATACTTGTCAT 58.821 41.667 0.00 0.00 0.00 3.06
6554 7548 5.643777 CCTCCGTCTGAAAATACTTGTCATT 59.356 40.000 0.00 0.00 0.00 2.57
6555 7549 6.816640 CCTCCGTCTGAAAATACTTGTCATTA 59.183 38.462 0.00 0.00 0.00 1.90
6556 7550 7.333423 CCTCCGTCTGAAAATACTTGTCATTAA 59.667 37.037 0.00 0.00 0.00 1.40
6557 7551 8.610248 TCCGTCTGAAAATACTTGTCATTAAA 57.390 30.769 0.00 0.00 0.00 1.52
6558 7552 9.058174 TCCGTCTGAAAATACTTGTCATTAAAA 57.942 29.630 0.00 0.00 0.00 1.52
6559 7553 9.672086 CCGTCTGAAAATACTTGTCATTAAAAA 57.328 29.630 0.00 0.00 0.00 1.94
6597 7591 9.971922 ACTTGTCATCAAAAAGAATAAAAGAGG 57.028 29.630 0.00 0.00 32.87 3.69
6643 7637 8.772250 AGTTCTAGATACATCCTTTTTCATCCA 58.228 33.333 0.00 0.00 0.00 3.41
6644 7638 9.566432 GTTCTAGATACATCCTTTTTCATCCAT 57.434 33.333 0.00 0.00 0.00 3.41
6649 7643 9.258629 AGATACATCCTTTTTCATCCATTTTGA 57.741 29.630 0.00 0.00 0.00 2.69
6651 7645 9.826574 ATACATCCTTTTTCATCCATTTTGATG 57.173 29.630 0.00 0.00 42.84 3.07
6666 7660 9.402320 TCCATTTTGATGATAAGTATTTTCGGA 57.598 29.630 0.00 0.00 0.00 4.55
6667 7661 9.450807 CCATTTTGATGATAAGTATTTTCGGAC 57.549 33.333 0.00 0.00 0.00 4.79
6668 7662 9.158364 CATTTTGATGATAAGTATTTTCGGACG 57.842 33.333 0.00 0.00 0.00 4.79
6669 7663 6.838198 TTGATGATAAGTATTTTCGGACGG 57.162 37.500 0.00 0.00 0.00 4.79
6670 7664 6.151663 TGATGATAAGTATTTTCGGACGGA 57.848 37.500 0.00 0.00 0.00 4.69
6671 7665 6.213677 TGATGATAAGTATTTTCGGACGGAG 58.786 40.000 0.00 0.00 0.00 4.63
6672 7666 4.940463 TGATAAGTATTTTCGGACGGAGG 58.060 43.478 0.00 0.00 0.00 4.30
6673 7667 2.685850 AAGTATTTTCGGACGGAGGG 57.314 50.000 0.00 0.00 0.00 4.30
6674 7668 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
6675 7669 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
6690 7684 0.755686 GGGAGTATCTCACAGCAGGG 59.244 60.000 0.00 0.00 33.91 4.45
6741 7735 2.360801 CAGTCGTGAAAATTTGTGGGGT 59.639 45.455 0.00 0.00 0.00 4.95
6806 7800 8.662781 TGAAATACTAGGAAATCGAGGAAATG 57.337 34.615 0.00 0.00 0.00 2.32
6809 7803 9.543783 AAATACTAGGAAATCGAGGAAATGTAC 57.456 33.333 0.00 0.00 0.00 2.90
6815 7809 2.273370 TCGAGGAAATGTACGTGCTC 57.727 50.000 4.97 0.00 0.00 4.26
6818 7812 2.930040 CGAGGAAATGTACGTGCTCATT 59.070 45.455 4.97 7.32 36.07 2.57
6819 7813 3.242091 CGAGGAAATGTACGTGCTCATTG 60.242 47.826 4.97 0.00 34.98 2.82
6820 7814 3.674997 AGGAAATGTACGTGCTCATTGT 58.325 40.909 4.97 2.45 34.98 2.71
6821 7815 4.072131 AGGAAATGTACGTGCTCATTGTT 58.928 39.130 4.97 0.00 34.98 2.83
6822 7816 4.083324 AGGAAATGTACGTGCTCATTGTTG 60.083 41.667 4.97 0.00 34.98 3.33
6823 7817 4.083537 GGAAATGTACGTGCTCATTGTTGA 60.084 41.667 4.97 0.00 34.98 3.18
6824 7818 5.431420 AAATGTACGTGCTCATTGTTGAA 57.569 34.783 4.97 0.00 34.98 2.69
6825 7819 5.431420 AATGTACGTGCTCATTGTTGAAA 57.569 34.783 4.97 0.00 33.74 2.69
6826 7820 4.203950 TGTACGTGCTCATTGTTGAAAC 57.796 40.909 4.97 0.00 0.00 2.78
6827 7821 2.383298 ACGTGCTCATTGTTGAAACG 57.617 45.000 0.00 8.48 42.94 3.60
6828 7822 1.668751 ACGTGCTCATTGTTGAAACGT 59.331 42.857 9.43 9.43 44.23 3.99
6829 7823 2.036217 CGTGCTCATTGTTGAAACGTG 58.964 47.619 0.00 0.00 37.29 4.49
6830 7824 2.286125 CGTGCTCATTGTTGAAACGTGA 60.286 45.455 0.00 2.44 37.29 4.35
6831 7825 3.606846 CGTGCTCATTGTTGAAACGTGAT 60.607 43.478 0.00 0.00 37.29 3.06
6832 7826 4.376920 CGTGCTCATTGTTGAAACGTGATA 60.377 41.667 0.00 0.00 37.29 2.15
6833 7827 5.631026 GTGCTCATTGTTGAAACGTGATAT 58.369 37.500 0.00 0.00 0.00 1.63
6834 7828 5.734498 GTGCTCATTGTTGAAACGTGATATC 59.266 40.000 0.00 0.00 0.00 1.63
6835 7829 5.643348 TGCTCATTGTTGAAACGTGATATCT 59.357 36.000 3.98 0.00 0.00 1.98
6836 7830 6.149308 TGCTCATTGTTGAAACGTGATATCTT 59.851 34.615 3.98 0.00 0.00 2.40
6837 7831 7.023575 GCTCATTGTTGAAACGTGATATCTTT 58.976 34.615 3.98 0.00 0.00 2.52
6838 7832 7.007725 GCTCATTGTTGAAACGTGATATCTTTG 59.992 37.037 3.98 0.00 0.00 2.77
6839 7833 7.870826 TCATTGTTGAAACGTGATATCTTTGT 58.129 30.769 3.98 0.00 0.00 2.83
6840 7834 8.994170 TCATTGTTGAAACGTGATATCTTTGTA 58.006 29.630 3.98 0.00 0.00 2.41
6841 7835 9.773328 CATTGTTGAAACGTGATATCTTTGTAT 57.227 29.630 3.98 0.00 0.00 2.29
6871 7865 9.967451 TTATCGACTGATTCTCCTATTATCTCT 57.033 33.333 0.00 0.00 35.99 3.10
6873 7867 9.613428 ATCGACTGATTCTCCTATTATCTCTAG 57.387 37.037 0.00 0.00 0.00 2.43
6874 7868 8.598916 TCGACTGATTCTCCTATTATCTCTAGT 58.401 37.037 0.00 0.00 0.00 2.57
6875 7869 8.879759 CGACTGATTCTCCTATTATCTCTAGTC 58.120 40.741 0.00 0.00 0.00 2.59
6876 7870 9.959721 GACTGATTCTCCTATTATCTCTAGTCT 57.040 37.037 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.955101 CTAGGAGGAGTCGGCGCG 61.955 72.222 0.00 0.00 0.00 6.86
14 15 4.273257 GCTAGGAGGAGTCGGCGC 62.273 72.222 0.00 0.00 0.00 6.53
15 16 3.597728 GGCTAGGAGGAGTCGGCG 61.598 72.222 0.00 0.00 0.00 6.46
16 17 3.228017 GGGCTAGGAGGAGTCGGC 61.228 72.222 0.00 0.00 0.00 5.54
17 18 2.907917 CGGGCTAGGAGGAGTCGG 60.908 72.222 0.00 0.00 0.00 4.79
18 19 3.597728 GCGGGCTAGGAGGAGTCG 61.598 72.222 0.00 0.00 0.00 4.18
19 20 3.597728 CGCGGGCTAGGAGGAGTC 61.598 72.222 0.00 0.00 0.00 3.36
57 58 3.300765 AAACGTCGAGGTCGCCCT 61.301 61.111 11.73 0.00 46.66 5.19
58 59 2.830704 ATCAAACGTCGAGGTCGCCC 62.831 60.000 11.73 0.00 39.60 6.13
59 60 1.445582 ATCAAACGTCGAGGTCGCC 60.446 57.895 11.73 0.00 39.60 5.54
60 61 1.702299 CATCAAACGTCGAGGTCGC 59.298 57.895 11.73 0.00 39.60 5.19
61 62 1.006825 TGCATCAAACGTCGAGGTCG 61.007 55.000 11.73 6.28 41.45 4.79
62 63 1.359848 ATGCATCAAACGTCGAGGTC 58.640 50.000 11.73 0.00 0.00 3.85
63 64 1.732259 GAATGCATCAAACGTCGAGGT 59.268 47.619 4.63 4.63 0.00 3.85
64 65 1.062587 GGAATGCATCAAACGTCGAGG 59.937 52.381 0.00 3.03 0.00 4.63
65 66 2.002586 AGGAATGCATCAAACGTCGAG 58.997 47.619 0.00 0.00 0.00 4.04
66 67 2.093306 AGGAATGCATCAAACGTCGA 57.907 45.000 0.00 0.00 0.00 4.20
67 68 2.508867 CAAGGAATGCATCAAACGTCG 58.491 47.619 0.00 0.00 0.00 5.12
79 80 1.197721 AGAAAAGACGCGCAAGGAATG 59.802 47.619 5.73 0.00 38.28 2.67
80 81 1.523758 AGAAAAGACGCGCAAGGAAT 58.476 45.000 5.73 0.00 38.28 3.01
81 82 1.305201 AAGAAAAGACGCGCAAGGAA 58.695 45.000 5.73 0.00 38.28 3.36
82 83 1.305201 AAAGAAAAGACGCGCAAGGA 58.695 45.000 5.73 0.00 38.28 3.36
83 84 2.119671 AAAAGAAAAGACGCGCAAGG 57.880 45.000 5.73 0.00 38.28 3.61
100 101 3.046390 CAAATAGTTCGGCGCACAAAAA 58.954 40.909 12.93 0.00 0.00 1.94
101 102 2.656085 CAAATAGTTCGGCGCACAAAA 58.344 42.857 12.93 0.00 0.00 2.44
102 103 1.664588 GCAAATAGTTCGGCGCACAAA 60.665 47.619 12.93 0.00 0.00 2.83
103 104 0.109964 GCAAATAGTTCGGCGCACAA 60.110 50.000 12.93 0.00 0.00 3.33
104 105 0.953471 AGCAAATAGTTCGGCGCACA 60.953 50.000 12.93 0.00 0.00 4.57
105 106 0.168128 AAGCAAATAGTTCGGCGCAC 59.832 50.000 10.83 0.00 0.00 5.34
106 107 0.167908 CAAGCAAATAGTTCGGCGCA 59.832 50.000 10.83 0.00 0.00 6.09
107 108 0.168128 ACAAGCAAATAGTTCGGCGC 59.832 50.000 0.00 0.00 0.00 6.53
108 109 1.202031 GGACAAGCAAATAGTTCGGCG 60.202 52.381 0.00 0.00 0.00 6.46
109 110 2.084546 AGGACAAGCAAATAGTTCGGC 58.915 47.619 0.00 0.00 0.00 5.54
110 111 4.215399 TGAAAGGACAAGCAAATAGTTCGG 59.785 41.667 0.00 0.00 0.00 4.30
111 112 5.356882 TGAAAGGACAAGCAAATAGTTCG 57.643 39.130 0.00 0.00 0.00 3.95
112 113 7.867403 TCAAATGAAAGGACAAGCAAATAGTTC 59.133 33.333 0.00 0.00 0.00 3.01
113 114 7.725251 TCAAATGAAAGGACAAGCAAATAGTT 58.275 30.769 0.00 0.00 0.00 2.24
114 115 7.288810 TCAAATGAAAGGACAAGCAAATAGT 57.711 32.000 0.00 0.00 0.00 2.12
115 116 7.219535 CGATCAAATGAAAGGACAAGCAAATAG 59.780 37.037 0.00 0.00 0.00 1.73
116 117 7.028962 CGATCAAATGAAAGGACAAGCAAATA 58.971 34.615 0.00 0.00 0.00 1.40
117 118 5.865552 CGATCAAATGAAAGGACAAGCAAAT 59.134 36.000 0.00 0.00 0.00 2.32
118 119 5.221880 CGATCAAATGAAAGGACAAGCAAA 58.778 37.500 0.00 0.00 0.00 3.68
119 120 4.797471 CGATCAAATGAAAGGACAAGCAA 58.203 39.130 0.00 0.00 0.00 3.91
120 121 3.366273 GCGATCAAATGAAAGGACAAGCA 60.366 43.478 0.00 0.00 0.00 3.91
121 122 3.174375 GCGATCAAATGAAAGGACAAGC 58.826 45.455 0.00 0.00 0.00 4.01
122 123 3.728864 CGGCGATCAAATGAAAGGACAAG 60.729 47.826 0.00 0.00 0.00 3.16
123 124 2.161410 CGGCGATCAAATGAAAGGACAA 59.839 45.455 0.00 0.00 0.00 3.18
124 125 1.737236 CGGCGATCAAATGAAAGGACA 59.263 47.619 0.00 0.00 0.00 4.02
125 126 2.006888 TCGGCGATCAAATGAAAGGAC 58.993 47.619 4.99 0.00 0.00 3.85
126 127 2.394930 TCGGCGATCAAATGAAAGGA 57.605 45.000 4.99 0.00 0.00 3.36
127 128 2.420022 AGTTCGGCGATCAAATGAAAGG 59.580 45.455 19.04 0.00 0.00 3.11
128 129 3.120199 ACAGTTCGGCGATCAAATGAAAG 60.120 43.478 19.04 0.00 0.00 2.62
129 130 2.811431 ACAGTTCGGCGATCAAATGAAA 59.189 40.909 19.04 0.00 0.00 2.69
130 131 2.159430 CACAGTTCGGCGATCAAATGAA 59.841 45.455 19.04 0.00 0.00 2.57
131 132 1.731709 CACAGTTCGGCGATCAAATGA 59.268 47.619 19.04 0.00 0.00 2.57
132 133 1.202065 CCACAGTTCGGCGATCAAATG 60.202 52.381 19.04 12.63 0.00 2.32
133 134 1.086696 CCACAGTTCGGCGATCAAAT 58.913 50.000 19.04 0.00 0.00 2.32
134 135 1.573829 GCCACAGTTCGGCGATCAAA 61.574 55.000 19.04 0.00 40.35 2.69
135 136 2.032634 GCCACAGTTCGGCGATCAA 61.033 57.895 19.04 0.00 40.35 2.57
136 137 2.434185 GCCACAGTTCGGCGATCA 60.434 61.111 19.04 0.00 40.35 2.92
142 143 1.354337 CGATCAGTGCCACAGTTCGG 61.354 60.000 11.50 0.00 0.00 4.30
143 144 1.959899 GCGATCAGTGCCACAGTTCG 61.960 60.000 14.14 14.14 32.39 3.95
144 145 1.790387 GCGATCAGTGCCACAGTTC 59.210 57.895 0.00 0.00 0.00 3.01
145 146 3.972227 GCGATCAGTGCCACAGTT 58.028 55.556 0.00 0.00 0.00 3.16
152 153 1.258982 CAATAGTTCGGCGATCAGTGC 59.741 52.381 19.04 2.96 0.00 4.40
153 154 1.258982 GCAATAGTTCGGCGATCAGTG 59.741 52.381 19.04 13.29 0.00 3.66
154 155 1.571919 GCAATAGTTCGGCGATCAGT 58.428 50.000 19.04 7.40 0.00 3.41
161 162 1.125021 CGATCATCGCAATAGTTCGGC 59.875 52.381 0.00 0.00 31.14 5.54
173 174 1.280982 CCATAATCCGGCGATCATCG 58.719 55.000 9.30 1.50 43.89 3.84
174 175 1.009829 GCCATAATCCGGCGATCATC 58.990 55.000 9.30 0.00 40.35 2.92
175 176 3.159298 GCCATAATCCGGCGATCAT 57.841 52.632 9.30 0.00 40.35 2.45
176 177 4.693532 GCCATAATCCGGCGATCA 57.306 55.556 9.30 0.00 40.35 2.92
181 182 1.021968 AAAGAACGCCATAATCCGGC 58.978 50.000 0.00 0.00 46.62 6.13
182 183 3.127895 TCAAAAAGAACGCCATAATCCGG 59.872 43.478 0.00 0.00 0.00 5.14
183 184 4.349663 TCAAAAAGAACGCCATAATCCG 57.650 40.909 0.00 0.00 0.00 4.18
184 185 5.060446 CGTTTCAAAAAGAACGCCATAATCC 59.940 40.000 0.00 0.00 35.56 3.01
185 186 5.060446 CCGTTTCAAAAAGAACGCCATAATC 59.940 40.000 3.34 0.00 35.56 1.75
186 187 4.920927 CCGTTTCAAAAAGAACGCCATAAT 59.079 37.500 3.34 0.00 35.56 1.28
187 188 4.291783 CCGTTTCAAAAAGAACGCCATAA 58.708 39.130 3.34 0.00 35.56 1.90
188 189 3.304794 CCCGTTTCAAAAAGAACGCCATA 60.305 43.478 3.34 0.00 35.56 2.74
189 190 2.544903 CCCGTTTCAAAAAGAACGCCAT 60.545 45.455 3.34 0.00 35.56 4.40
190 191 1.202313 CCCGTTTCAAAAAGAACGCCA 60.202 47.619 3.34 0.00 35.56 5.69
191 192 1.065851 TCCCGTTTCAAAAAGAACGCC 59.934 47.619 3.34 0.00 35.56 5.68
192 193 2.478547 TCCCGTTTCAAAAAGAACGC 57.521 45.000 3.34 0.00 35.56 4.84
193 194 2.779471 CGTTCCCGTTTCAAAAAGAACG 59.221 45.455 13.18 13.18 35.56 3.95
194 195 4.018649 TCGTTCCCGTTTCAAAAAGAAC 57.981 40.909 0.00 0.00 35.56 3.01
195 196 4.335874 TGATCGTTCCCGTTTCAAAAAGAA 59.664 37.500 0.00 0.00 35.01 2.52
196 197 3.878103 TGATCGTTCCCGTTTCAAAAAGA 59.122 39.130 0.00 0.00 35.01 2.52
197 198 4.217754 TGATCGTTCCCGTTTCAAAAAG 57.782 40.909 0.00 0.00 35.01 2.27
198 199 4.096682 ACTTGATCGTTCCCGTTTCAAAAA 59.903 37.500 0.00 0.00 37.09 1.94
199 200 3.628487 ACTTGATCGTTCCCGTTTCAAAA 59.372 39.130 0.00 0.00 37.09 2.44
200 201 3.207778 ACTTGATCGTTCCCGTTTCAAA 58.792 40.909 0.00 0.00 37.09 2.69
201 202 2.841215 ACTTGATCGTTCCCGTTTCAA 58.159 42.857 0.00 0.00 36.56 2.69
202 203 2.536761 ACTTGATCGTTCCCGTTTCA 57.463 45.000 0.00 0.00 35.01 2.69
203 204 3.249080 TCAAACTTGATCGTTCCCGTTTC 59.751 43.478 7.06 0.00 31.54 2.78
204 205 3.207778 TCAAACTTGATCGTTCCCGTTT 58.792 40.909 5.09 5.09 31.54 3.60
205 206 2.841215 TCAAACTTGATCGTTCCCGTT 58.159 42.857 0.00 0.00 31.54 4.44
206 207 2.536761 TCAAACTTGATCGTTCCCGT 57.463 45.000 0.00 0.00 31.54 5.28
207 208 5.293324 TCATATTCAAACTTGATCGTTCCCG 59.707 40.000 0.00 0.00 37.00 5.14
208 209 6.538742 TCTCATATTCAAACTTGATCGTTCCC 59.461 38.462 0.00 0.00 37.00 3.97
209 210 7.539712 TCTCATATTCAAACTTGATCGTTCC 57.460 36.000 0.00 0.00 37.00 3.62
210 211 7.585573 GCATCTCATATTCAAACTTGATCGTTC 59.414 37.037 0.00 0.00 37.00 3.95
211 212 7.412853 GCATCTCATATTCAAACTTGATCGTT 58.587 34.615 0.00 0.00 37.00 3.85
212 213 6.292542 CGCATCTCATATTCAAACTTGATCGT 60.293 38.462 0.00 0.00 37.00 3.73
213 214 6.069563 CGCATCTCATATTCAAACTTGATCG 58.930 40.000 0.00 0.00 37.00 3.69
214 215 6.849811 CACGCATCTCATATTCAAACTTGATC 59.150 38.462 0.00 0.00 37.00 2.92
215 216 6.238566 CCACGCATCTCATATTCAAACTTGAT 60.239 38.462 0.00 0.00 37.00 2.57
216 217 5.065090 CCACGCATCTCATATTCAAACTTGA 59.935 40.000 0.00 0.00 34.92 3.02
217 218 5.163723 ACCACGCATCTCATATTCAAACTTG 60.164 40.000 0.00 0.00 0.00 3.16
218 219 4.943705 ACCACGCATCTCATATTCAAACTT 59.056 37.500 0.00 0.00 0.00 2.66
219 220 4.517285 ACCACGCATCTCATATTCAAACT 58.483 39.130 0.00 0.00 0.00 2.66
220 221 4.882671 ACCACGCATCTCATATTCAAAC 57.117 40.909 0.00 0.00 0.00 2.93
221 222 4.096231 CCAACCACGCATCTCATATTCAAA 59.904 41.667 0.00 0.00 0.00 2.69
222 223 3.627123 CCAACCACGCATCTCATATTCAA 59.373 43.478 0.00 0.00 0.00 2.69
223 224 3.205338 CCAACCACGCATCTCATATTCA 58.795 45.455 0.00 0.00 0.00 2.57
224 225 2.549754 CCCAACCACGCATCTCATATTC 59.450 50.000 0.00 0.00 0.00 1.75
225 226 2.575532 CCCAACCACGCATCTCATATT 58.424 47.619 0.00 0.00 0.00 1.28
226 227 1.202806 CCCCAACCACGCATCTCATAT 60.203 52.381 0.00 0.00 0.00 1.78
227 228 0.180171 CCCCAACCACGCATCTCATA 59.820 55.000 0.00 0.00 0.00 2.15
228 229 1.077501 CCCCAACCACGCATCTCAT 60.078 57.895 0.00 0.00 0.00 2.90
229 230 2.350895 CCCCAACCACGCATCTCA 59.649 61.111 0.00 0.00 0.00 3.27
230 231 3.134127 GCCCCAACCACGCATCTC 61.134 66.667 0.00 0.00 0.00 2.75
231 232 4.740822 GGCCCCAACCACGCATCT 62.741 66.667 0.00 0.00 0.00 2.90
232 233 4.740822 AGGCCCCAACCACGCATC 62.741 66.667 0.00 0.00 0.00 3.91
233 234 4.299796 AAGGCCCCAACCACGCAT 62.300 61.111 0.00 0.00 0.00 4.73
247 248 4.109675 CAGGTACCGCCCCCAAGG 62.110 72.222 6.18 0.00 38.26 3.61
248 249 4.109675 CCAGGTACCGCCCCCAAG 62.110 72.222 6.18 0.00 38.26 3.61
255 256 3.547513 CTAGCCCCCAGGTACCGC 61.548 72.222 6.18 3.17 34.57 5.68
256 257 2.842936 CCTAGCCCCCAGGTACCG 60.843 72.222 6.18 1.26 34.57 4.02
257 258 2.447959 CCCTAGCCCCCAGGTACC 60.448 72.222 2.73 2.73 34.57 3.34
258 259 3.169242 GCCCTAGCCCCCAGGTAC 61.169 72.222 0.00 0.00 34.57 3.34
268 269 4.858680 GGCGACCAAGGCCCTAGC 62.859 72.222 0.00 0.00 44.97 3.42
281 282 4.718827 TTTAGTCCCCGGGGGCGA 62.719 66.667 38.08 31.85 46.16 5.54
282 283 2.561467 ATTTTTAGTCCCCGGGGGCG 62.561 60.000 38.08 14.31 46.16 6.13
283 284 0.324923 AATTTTTAGTCCCCGGGGGC 60.325 55.000 38.41 38.41 43.94 5.80
284 285 1.272816 ACAATTTTTAGTCCCCGGGGG 60.273 52.381 39.51 27.32 46.11 5.40
285 286 2.097036 GACAATTTTTAGTCCCCGGGG 58.903 52.381 35.80 35.80 0.00 5.73
286 287 1.741145 CGACAATTTTTAGTCCCCGGG 59.259 52.381 15.80 15.80 0.00 5.73
287 288 1.741145 CCGACAATTTTTAGTCCCCGG 59.259 52.381 0.00 0.00 0.00 5.73
288 289 1.741145 CCCGACAATTTTTAGTCCCCG 59.259 52.381 0.00 0.00 0.00 5.73
289 290 2.490509 CACCCGACAATTTTTAGTCCCC 59.509 50.000 0.00 0.00 0.00 4.81
290 291 2.490509 CCACCCGACAATTTTTAGTCCC 59.509 50.000 0.00 0.00 0.00 4.46
291 292 3.189910 GTCCACCCGACAATTTTTAGTCC 59.810 47.826 0.00 0.00 41.54 3.85
292 293 3.120442 CGTCCACCCGACAATTTTTAGTC 60.120 47.826 0.00 0.00 42.07 2.59
293 294 2.809696 CGTCCACCCGACAATTTTTAGT 59.190 45.455 0.00 0.00 42.07 2.24
294 295 2.413634 GCGTCCACCCGACAATTTTTAG 60.414 50.000 0.00 0.00 42.07 1.85
295 296 1.536331 GCGTCCACCCGACAATTTTTA 59.464 47.619 0.00 0.00 42.07 1.52
296 297 0.312729 GCGTCCACCCGACAATTTTT 59.687 50.000 0.00 0.00 42.07 1.94
297 298 1.520600 GGCGTCCACCCGACAATTTT 61.521 55.000 0.00 0.00 42.07 1.82
298 299 1.969589 GGCGTCCACCCGACAATTT 60.970 57.895 0.00 0.00 42.07 1.82
299 300 2.359478 GGCGTCCACCCGACAATT 60.359 61.111 0.00 0.00 42.07 2.32
300 301 4.404098 GGGCGTCCACCCGACAAT 62.404 66.667 0.00 0.00 42.07 2.71
307 308 4.910585 CATAGGCGGGCGTCCACC 62.911 72.222 4.48 4.48 35.48 4.61
319 320 4.632974 GGCCCTCCAGCGCATAGG 62.633 72.222 11.47 13.04 0.00 2.57
320 321 2.891941 TTTGGCCCTCCAGCGCATAG 62.892 60.000 11.47 3.07 44.53 2.23
321 322 2.977718 TTTGGCCCTCCAGCGCATA 61.978 57.895 11.47 0.00 44.53 3.14
322 323 4.365111 TTTGGCCCTCCAGCGCAT 62.365 61.111 11.47 0.00 44.53 4.73
325 326 4.697756 TCGTTTGGCCCTCCAGCG 62.698 66.667 0.00 0.00 44.53 5.18
326 327 2.747855 CTCGTTTGGCCCTCCAGC 60.748 66.667 0.00 0.00 44.53 4.85
327 328 1.672356 CACTCGTTTGGCCCTCCAG 60.672 63.158 0.00 0.00 44.53 3.86
328 329 2.429930 CACTCGTTTGGCCCTCCA 59.570 61.111 0.00 0.00 41.55 3.86
329 330 2.359975 CCACTCGTTTGGCCCTCC 60.360 66.667 0.00 0.00 0.00 4.30
330 331 1.376037 CTCCACTCGTTTGGCCCTC 60.376 63.158 0.00 0.00 36.48 4.30
331 332 1.201429 ATCTCCACTCGTTTGGCCCT 61.201 55.000 0.00 0.00 36.48 5.19
332 333 1.026718 CATCTCCACTCGTTTGGCCC 61.027 60.000 0.00 0.00 36.48 5.80
333 334 1.648467 GCATCTCCACTCGTTTGGCC 61.648 60.000 0.00 0.00 36.48 5.36
334 335 0.674895 AGCATCTCCACTCGTTTGGC 60.675 55.000 0.66 0.00 36.48 4.52
335 336 2.672961 TAGCATCTCCACTCGTTTGG 57.327 50.000 0.00 0.00 38.10 3.28
336 337 3.785486 TCATAGCATCTCCACTCGTTTG 58.215 45.455 0.00 0.00 0.00 2.93
337 338 3.701542 TCTCATAGCATCTCCACTCGTTT 59.298 43.478 0.00 0.00 0.00 3.60
338 339 3.291584 TCTCATAGCATCTCCACTCGTT 58.708 45.455 0.00 0.00 0.00 3.85
339 340 2.937519 TCTCATAGCATCTCCACTCGT 58.062 47.619 0.00 0.00 0.00 4.18
340 341 3.998099 TTCTCATAGCATCTCCACTCG 57.002 47.619 0.00 0.00 0.00 4.18
341 342 5.423015 TGTTTTCTCATAGCATCTCCACTC 58.577 41.667 0.00 0.00 0.00 3.51
342 343 5.188555 TCTGTTTTCTCATAGCATCTCCACT 59.811 40.000 0.00 0.00 0.00 4.00
343 344 5.423015 TCTGTTTTCTCATAGCATCTCCAC 58.577 41.667 0.00 0.00 0.00 4.02
344 345 5.396101 CCTCTGTTTTCTCATAGCATCTCCA 60.396 44.000 0.00 0.00 0.00 3.86
345 346 5.055812 CCTCTGTTTTCTCATAGCATCTCC 58.944 45.833 0.00 0.00 0.00 3.71
346 347 5.911752 TCCTCTGTTTTCTCATAGCATCTC 58.088 41.667 0.00 0.00 0.00 2.75
347 348 5.946942 TCCTCTGTTTTCTCATAGCATCT 57.053 39.130 0.00 0.00 0.00 2.90
348 349 6.992063 TTTCCTCTGTTTTCTCATAGCATC 57.008 37.500 0.00 0.00 0.00 3.91
349 350 7.449704 AGTTTTTCCTCTGTTTTCTCATAGCAT 59.550 33.333 0.00 0.00 0.00 3.79
350 351 6.772716 AGTTTTTCCTCTGTTTTCTCATAGCA 59.227 34.615 0.00 0.00 0.00 3.49
351 352 7.041098 TGAGTTTTTCCTCTGTTTTCTCATAGC 60.041 37.037 0.00 0.00 32.50 2.97
352 353 8.383318 TGAGTTTTTCCTCTGTTTTCTCATAG 57.617 34.615 0.00 0.00 32.50 2.23
353 354 8.746052 TTGAGTTTTTCCTCTGTTTTCTCATA 57.254 30.769 0.00 0.00 32.50 2.15
354 355 7.645058 TTGAGTTTTTCCTCTGTTTTCTCAT 57.355 32.000 0.00 0.00 32.50 2.90
436 445 2.651361 CCGGGATAGCGGCTAGTG 59.349 66.667 15.78 4.96 0.00 2.74
455 464 0.253160 AGGGCAGTTGGATCAGGGTA 60.253 55.000 0.00 0.00 0.00 3.69
473 696 2.675056 GCTGCTCCTGCACGTGAAG 61.675 63.158 22.23 19.64 45.31 3.02
600 823 2.117206 GTGGGGTTGGTGCATCCA 59.883 61.111 0.00 0.00 45.60 3.41
883 1113 4.379243 CGCCCCTGCAGAACGTCT 62.379 66.667 17.39 0.00 37.32 4.18
933 1163 0.593128 CGCTTCCAAACCTCCACAAG 59.407 55.000 0.00 0.00 0.00 3.16
1194 1424 1.517039 CAGCAGCACGACGATAGCA 60.517 57.895 0.00 0.00 42.67 3.49
1507 1761 3.985019 TGGTACCTGCCGAAATTTAGA 57.015 42.857 14.36 0.00 0.00 2.10
1754 2008 3.889538 CGGTATTGAGACTGGATAGGTCA 59.110 47.826 0.00 0.00 36.29 4.02
1976 2230 0.324943 GCACAGGGTTTCCTAGCTGA 59.675 55.000 0.00 0.00 42.67 4.26
2546 3358 6.764560 TGAGACCTAACTACAACAAAAGGTTC 59.235 38.462 0.00 0.00 37.72 3.62
2608 3420 4.150897 ACAACTTAGCTTGGTCAAGTCA 57.849 40.909 11.71 0.00 40.45 3.41
2609 3421 4.152580 GCTACAACTTAGCTTGGTCAAGTC 59.847 45.833 11.71 5.17 40.45 3.01
2610 3422 4.065789 GCTACAACTTAGCTTGGTCAAGT 58.934 43.478 11.71 0.00 40.45 3.16
2611 3423 4.670227 GCTACAACTTAGCTTGGTCAAG 57.330 45.455 6.36 6.36 41.24 3.02
2730 3543 2.961741 TGTGGCAACCAAAAGCAATCTA 59.038 40.909 0.00 0.00 34.18 1.98
2791 3604 1.471676 CGCTCAATCTACCCACTGGAC 60.472 57.143 0.00 0.00 34.81 4.02
2792 3605 0.824109 CGCTCAATCTACCCACTGGA 59.176 55.000 0.00 0.00 34.81 3.86
2793 3606 0.537188 ACGCTCAATCTACCCACTGG 59.463 55.000 0.00 0.00 37.80 4.00
2937 3767 6.341316 GGAAACACACTTATCTCTGCTATGA 58.659 40.000 0.00 0.00 0.00 2.15
3102 3943 8.426881 AAAGAGAACTTCAAAGACAAGTAGAC 57.573 34.615 0.00 0.00 32.71 2.59
3314 4159 5.055144 CCATACTCTTGGATGTGAGATGTG 58.945 45.833 0.00 0.00 39.25 3.21
3345 4190 5.391950 CCCATCAATCTTTAAACACTGGTCG 60.392 44.000 0.00 0.00 0.00 4.79
3347 4192 4.772100 CCCCATCAATCTTTAAACACTGGT 59.228 41.667 0.00 0.00 0.00 4.00
3431 4276 9.191995 CAATATAACTCGTATCACAGCATACAA 57.808 33.333 0.00 0.00 30.61 2.41
3433 4278 7.275779 CCCAATATAACTCGTATCACAGCATAC 59.724 40.741 0.00 0.00 0.00 2.39
3457 4302 4.509616 GTTTATGGGTTAAACATTGCCCC 58.490 43.478 0.00 0.00 45.98 5.80
3542 4387 2.178521 CTCGAACCCGTGACCTCG 59.821 66.667 0.00 0.00 37.05 4.63
3591 4436 7.592885 TTAGGTCTATAGTACGAAGCCATTT 57.407 36.000 0.00 0.00 0.00 2.32
3613 4458 1.982958 GGGAAGGGTCTGACCACTTTA 59.017 52.381 26.94 0.00 41.02 1.85
3698 4543 9.747293 GTCCATAGTACAGAGGAAGTATTTTAC 57.253 37.037 0.00 0.00 0.00 2.01
3699 4544 8.921205 GGTCCATAGTACAGAGGAAGTATTTTA 58.079 37.037 0.00 0.00 0.00 1.52
3700 4545 7.147532 GGGTCCATAGTACAGAGGAAGTATTTT 60.148 40.741 0.00 0.00 0.00 1.82
3701 4546 6.326843 GGGTCCATAGTACAGAGGAAGTATTT 59.673 42.308 0.00 0.00 0.00 1.40
3702 4547 5.839606 GGGTCCATAGTACAGAGGAAGTATT 59.160 44.000 0.00 0.00 0.00 1.89
3703 4548 5.103215 TGGGTCCATAGTACAGAGGAAGTAT 60.103 44.000 0.00 0.00 0.00 2.12
3704 4549 4.231195 TGGGTCCATAGTACAGAGGAAGTA 59.769 45.833 0.00 0.00 0.00 2.24
3705 4550 3.012502 TGGGTCCATAGTACAGAGGAAGT 59.987 47.826 0.00 0.00 0.00 3.01
3706 4551 3.643237 TGGGTCCATAGTACAGAGGAAG 58.357 50.000 0.00 0.00 0.00 3.46
3707 4552 3.769189 TGGGTCCATAGTACAGAGGAA 57.231 47.619 0.00 0.00 0.00 3.36
3708 4553 3.769189 TTGGGTCCATAGTACAGAGGA 57.231 47.619 0.00 0.00 0.00 3.71
3709 4554 3.775316 ACTTTGGGTCCATAGTACAGAGG 59.225 47.826 10.62 0.00 36.68 3.69
3710 4555 4.383118 CCACTTTGGGTCCATAGTACAGAG 60.383 50.000 11.68 1.76 36.38 3.35
3711 4556 3.517901 CCACTTTGGGTCCATAGTACAGA 59.482 47.826 11.68 0.00 36.38 3.41
3712 4557 3.263425 ACCACTTTGGGTCCATAGTACAG 59.737 47.826 11.68 7.49 43.37 2.74
3713 4558 3.253220 ACCACTTTGGGTCCATAGTACA 58.747 45.455 11.68 0.00 43.37 2.90
3760 4605 2.832733 ACTGGCTACTTTGTACTCCCTC 59.167 50.000 0.00 0.00 0.00 4.30
3815 4660 4.527944 GAGGCAGGGAATAATATTAGGGC 58.472 47.826 1.02 0.00 0.00 5.19
3832 4677 2.263895 ATAGTTACACCAGGGAGGCA 57.736 50.000 0.00 0.00 43.14 4.75
3833 4678 3.646736 AAATAGTTACACCAGGGAGGC 57.353 47.619 0.00 0.00 43.14 4.70
4039 4909 7.871973 TCAAAATAAAGCAGCTGCAATTAAAGA 59.128 29.630 38.24 24.68 45.16 2.52
4245 5117 2.971901 ATTTTGGGACGGAAGGAGTT 57.028 45.000 0.00 0.00 0.00 3.01
4246 5118 3.329814 ACTTATTTTGGGACGGAAGGAGT 59.670 43.478 0.00 0.00 0.00 3.85
4247 5119 3.689649 CACTTATTTTGGGACGGAAGGAG 59.310 47.826 0.00 0.00 0.00 3.69
4248 5120 3.073356 ACACTTATTTTGGGACGGAAGGA 59.927 43.478 0.00 0.00 0.00 3.36
4249 5121 3.418047 ACACTTATTTTGGGACGGAAGG 58.582 45.455 0.00 0.00 0.00 3.46
4250 5122 4.324267 AGACACTTATTTTGGGACGGAAG 58.676 43.478 0.00 0.00 0.00 3.46
4251 5123 4.202377 TGAGACACTTATTTTGGGACGGAA 60.202 41.667 0.00 0.00 0.00 4.30
4252 5124 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
4253 5125 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
4254 5126 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
4255 5127 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4256 5128 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4257 5129 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4258 5130 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4262 5134 9.269453 GGTTAGTACAAAGTTGAGACACTTATT 57.731 33.333 0.00 0.00 35.87 1.40
4263 5135 8.648693 AGGTTAGTACAAAGTTGAGACACTTAT 58.351 33.333 0.00 0.00 35.87 1.73
4264 5136 8.015185 AGGTTAGTACAAAGTTGAGACACTTA 57.985 34.615 0.00 0.00 35.87 2.24
4265 5137 6.885922 AGGTTAGTACAAAGTTGAGACACTT 58.114 36.000 0.00 0.00 38.74 3.16
4266 5138 6.481434 AGGTTAGTACAAAGTTGAGACACT 57.519 37.500 0.00 0.00 0.00 3.55
4267 5139 7.924947 ACTAAGGTTAGTACAAAGTTGAGACAC 59.075 37.037 0.32 0.00 41.92 3.67
4268 5140 8.015185 ACTAAGGTTAGTACAAAGTTGAGACA 57.985 34.615 0.32 0.00 41.92 3.41
4320 5192 7.437267 GTGTCTCAAGCTTAGTACAACTTTGTA 59.563 37.037 0.00 0.00 42.35 2.41
4321 5193 6.258068 GTGTCTCAAGCTTAGTACAACTTTGT 59.742 38.462 0.00 0.00 44.86 2.83
4322 5194 6.480320 AGTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
4323 5195 6.583562 AGTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
4324 5196 6.163135 AGTGTCTCAAGCTTAGTACAACTT 57.837 37.500 0.00 0.00 0.00 2.66
4325 5197 5.793030 AGTGTCTCAAGCTTAGTACAACT 57.207 39.130 0.00 0.00 0.00 3.16
4326 5198 8.535690 AATAAGTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
4327 5199 9.555727 AAAATAAGTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
4328 5200 8.988934 CAAAATAAGTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 0.36 0.00 2.90
4329 5201 8.443937 CCAAAATAAGTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
4330 5202 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
4331 5203 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
4332 5204 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
4333 5205 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
4334 5206 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
4335 5207 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
4336 5208 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
4337 5209 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
4338 5210 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4339 5211 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
4340 5212 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
4341 5213 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4342 5214 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4343 5215 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4344 5216 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4345 5217 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4346 5218 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4347 5219 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4348 5220 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4349 5221 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4350 5222 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4351 5223 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4352 5224 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
4353 5225 0.257039 GTAGTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
4354 5226 0.550432 AGTAGTACTCCCTCCGTCCC 59.450 60.000 0.00 0.00 0.00 4.46
4355 5227 2.433662 AAGTAGTACTCCCTCCGTCC 57.566 55.000 2.58 0.00 0.00 4.79
4356 5228 4.335037 CACTAAAGTAGTACTCCCTCCGTC 59.665 50.000 2.58 0.00 37.23 4.79
4357 5229 4.018960 TCACTAAAGTAGTACTCCCTCCGT 60.019 45.833 2.58 0.00 37.23 4.69
4358 5230 4.521146 TCACTAAAGTAGTACTCCCTCCG 58.479 47.826 2.58 0.00 37.23 4.63
4359 5231 6.367161 AGATCACTAAAGTAGTACTCCCTCC 58.633 44.000 2.58 0.00 37.23 4.30
4360 5232 8.977267 TTAGATCACTAAAGTAGTACTCCCTC 57.023 38.462 2.58 0.00 37.23 4.30
4361 5233 9.187996 GTTTAGATCACTAAAGTAGTACTCCCT 57.812 37.037 2.58 0.00 45.42 4.20
4362 5234 8.127954 CGTTTAGATCACTAAAGTAGTACTCCC 58.872 40.741 2.58 0.00 45.42 4.30
4363 5235 7.643371 GCGTTTAGATCACTAAAGTAGTACTCC 59.357 40.741 2.58 0.00 45.42 3.85
4364 5236 8.397148 AGCGTTTAGATCACTAAAGTAGTACTC 58.603 37.037 2.58 0.00 45.42 2.59
4365 5237 8.278729 AGCGTTTAGATCACTAAAGTAGTACT 57.721 34.615 0.00 0.00 45.42 2.73
4366 5238 8.397148 AGAGCGTTTAGATCACTAAAGTAGTAC 58.603 37.037 0.00 0.00 45.42 2.73
4417 5289 8.700644 CACAAATTATATTGCTCGGAGTAGTAC 58.299 37.037 6.90 0.00 33.52 2.73
4621 5580 9.684448 ATCAGATGTATATAGACACGTTTTCAG 57.316 33.333 1.52 0.00 30.52 3.02
4737 5697 8.947940 GCATTGCAGTTTAAGAATAAATCTACG 58.052 33.333 3.15 0.00 37.42 3.51
4795 5755 7.041030 TGTTCTAGCACATTTGATAAACGGAAA 60.041 33.333 0.00 0.00 0.00 3.13
5017 5994 2.093606 AGTAACCGGAGCTTAGAAAGGC 60.094 50.000 9.46 0.00 0.00 4.35
5180 6157 6.431852 GTCCCACACTGCCTAAGTTAATTAAA 59.568 38.462 0.00 0.00 36.83 1.52
5320 6297 5.179368 TCTTTTTGTGAGTATCTTTGCCTCG 59.821 40.000 0.00 0.00 34.92 4.63
5449 6427 9.549509 TGCAAATCGTGTTATTTAAGAATGTAC 57.450 29.630 0.00 0.00 0.00 2.90
5462 6440 2.811431 CCAAGACCTGCAAATCGTGTTA 59.189 45.455 10.50 0.00 0.00 2.41
5597 6575 4.702612 AGAAGCTCGTCAATCTACAGAAGA 59.297 41.667 0.00 0.00 39.02 2.87
5621 6599 6.808829 TGCATGGATTACATTCCTTTCATTC 58.191 36.000 0.00 0.00 37.84 2.67
5681 6659 8.907885 GGTGAAGATTTAGATTTATTCCTGCTT 58.092 33.333 0.00 0.00 0.00 3.91
5702 6680 8.694540 TCTTCATCAAATTTGAAAGAAGGTGAA 58.305 29.630 35.85 29.27 44.57 3.18
5795 6773 4.509616 TGGTTTTCTTTTCACTCGAGTCA 58.490 39.130 16.96 0.00 0.00 3.41
5827 6805 0.465705 TAGCCATCTCTTCCTTGCGG 59.534 55.000 0.00 0.00 0.00 5.69
5829 6807 3.347216 TGTTTAGCCATCTCTTCCTTGC 58.653 45.455 0.00 0.00 0.00 4.01
6078 7056 9.553064 AATCTTTGCAGGAAATATAGTAGACAG 57.447 33.333 0.00 0.00 0.00 3.51
6183 7162 7.070074 ACTCGAAAGAATATGGAACTGGACTAT 59.930 37.037 0.00 0.00 41.32 2.12
6217 7196 7.709182 CACAGCCAATGATATCAAAATTGACAT 59.291 33.333 9.99 0.00 40.49 3.06
6231 7210 5.012239 ACAACTGATTACACAGCCAATGAT 58.988 37.500 0.00 0.00 41.06 2.45
6288 7267 1.375523 TCGAAAGCGGGGAAAGAGC 60.376 57.895 0.00 0.00 38.28 4.09
6327 7306 3.380320 CGGGAGGGGAAAATATTGTGTTC 59.620 47.826 0.00 0.00 0.00 3.18
6417 7396 4.572389 CCGCTAGAAATGTTAACTGCATCT 59.428 41.667 7.22 7.84 0.00 2.90
6438 7432 8.661257 ACCTTGTTTTAAATGTTTTTCTTTCCG 58.339 29.630 0.00 0.00 0.00 4.30
6511 7505 4.503991 GGAGGGAGTATCAACCAAGCTATG 60.504 50.000 0.00 0.00 36.25 2.23
6512 7506 3.648545 GGAGGGAGTATCAACCAAGCTAT 59.351 47.826 0.00 0.00 36.25 2.97
6513 7507 3.039011 GGAGGGAGTATCAACCAAGCTA 58.961 50.000 0.00 0.00 36.25 3.32
6514 7508 1.840635 GGAGGGAGTATCAACCAAGCT 59.159 52.381 0.00 0.00 36.25 3.74
6515 7509 1.473434 CGGAGGGAGTATCAACCAAGC 60.473 57.143 0.00 0.00 36.25 4.01
6516 7510 1.831736 ACGGAGGGAGTATCAACCAAG 59.168 52.381 0.00 0.00 36.25 3.61
6517 7511 1.829222 GACGGAGGGAGTATCAACCAA 59.171 52.381 0.00 0.00 36.25 3.67
6518 7512 1.006758 AGACGGAGGGAGTATCAACCA 59.993 52.381 0.00 0.00 36.25 3.67
6519 7513 1.409427 CAGACGGAGGGAGTATCAACC 59.591 57.143 0.00 0.00 36.25 3.77
6520 7514 2.376109 TCAGACGGAGGGAGTATCAAC 58.624 52.381 0.00 0.00 36.25 3.18
6522 7516 2.820728 TTCAGACGGAGGGAGTATCA 57.179 50.000 0.00 0.00 36.25 2.15
6524 7518 5.209659 AGTATTTTCAGACGGAGGGAGTAT 58.790 41.667 0.00 0.00 0.00 2.12
6527 7521 4.184629 CAAGTATTTTCAGACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
6528 7522 3.581332 ACAAGTATTTTCAGACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
6529 7523 3.933332 GACAAGTATTTTCAGACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
6530 7524 4.566004 TGACAAGTATTTTCAGACGGAGG 58.434 43.478 0.00 0.00 0.00 4.30
6531 7525 6.727824 AATGACAAGTATTTTCAGACGGAG 57.272 37.500 0.00 0.00 0.00 4.63
6532 7526 8.610248 TTTAATGACAAGTATTTTCAGACGGA 57.390 30.769 0.00 0.00 0.00 4.69
6533 7527 9.672086 TTTTTAATGACAAGTATTTTCAGACGG 57.328 29.630 0.00 0.00 0.00 4.79
6571 7565 9.971922 CCTCTTTTATTCTTTTTGATGACAAGT 57.028 29.630 0.00 0.00 37.32 3.16
6617 7611 8.772250 TGGATGAAAAAGGATGTATCTAGAACT 58.228 33.333 0.00 0.00 0.00 3.01
6618 7612 8.964476 TGGATGAAAAAGGATGTATCTAGAAC 57.036 34.615 0.00 0.00 0.00 3.01
6623 7617 9.258629 TCAAAATGGATGAAAAAGGATGTATCT 57.741 29.630 0.00 0.00 0.00 1.98
6625 7619 9.826574 CATCAAAATGGATGAAAAAGGATGTAT 57.173 29.630 0.00 0.00 46.00 2.29
6640 7634 9.402320 TCCGAAAATACTTATCATCAAAATGGA 57.598 29.630 0.00 0.00 33.42 3.41
6641 7635 9.450807 GTCCGAAAATACTTATCATCAAAATGG 57.549 33.333 0.00 0.00 33.42 3.16
6642 7636 9.158364 CGTCCGAAAATACTTATCATCAAAATG 57.842 33.333 0.00 0.00 0.00 2.32
6643 7637 8.342634 CCGTCCGAAAATACTTATCATCAAAAT 58.657 33.333 0.00 0.00 0.00 1.82
6644 7638 7.549842 TCCGTCCGAAAATACTTATCATCAAAA 59.450 33.333 0.00 0.00 0.00 2.44
6645 7639 7.042950 TCCGTCCGAAAATACTTATCATCAAA 58.957 34.615 0.00 0.00 0.00 2.69
6646 7640 6.575267 TCCGTCCGAAAATACTTATCATCAA 58.425 36.000 0.00 0.00 0.00 2.57
6647 7641 6.151663 TCCGTCCGAAAATACTTATCATCA 57.848 37.500 0.00 0.00 0.00 3.07
6648 7642 5.634020 CCTCCGTCCGAAAATACTTATCATC 59.366 44.000 0.00 0.00 0.00 2.92
6649 7643 5.510861 CCCTCCGTCCGAAAATACTTATCAT 60.511 44.000 0.00 0.00 0.00 2.45
6650 7644 4.202182 CCCTCCGTCCGAAAATACTTATCA 60.202 45.833 0.00 0.00 0.00 2.15
6651 7645 4.038402 TCCCTCCGTCCGAAAATACTTATC 59.962 45.833 0.00 0.00 0.00 1.75
6652 7646 3.962718 TCCCTCCGTCCGAAAATACTTAT 59.037 43.478 0.00 0.00 0.00 1.73
6653 7647 3.364549 TCCCTCCGTCCGAAAATACTTA 58.635 45.455 0.00 0.00 0.00 2.24
6654 7648 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
6655 7649 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
6656 7650 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
6657 7651 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
6658 7652 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
6659 7653 1.753073 GATACTCCCTCCGTCCGAAAA 59.247 52.381 0.00 0.00 0.00 2.29
6660 7654 1.064166 AGATACTCCCTCCGTCCGAAA 60.064 52.381 0.00 0.00 0.00 3.46
6661 7655 0.549950 AGATACTCCCTCCGTCCGAA 59.450 55.000 0.00 0.00 0.00 4.30
6662 7656 0.108207 GAGATACTCCCTCCGTCCGA 59.892 60.000 0.00 0.00 0.00 4.55
6663 7657 0.179026 TGAGATACTCCCTCCGTCCG 60.179 60.000 0.00 0.00 0.00 4.79
6664 7658 1.320507 GTGAGATACTCCCTCCGTCC 58.679 60.000 0.00 0.00 0.00 4.79
6665 7659 1.950909 CTGTGAGATACTCCCTCCGTC 59.049 57.143 0.00 0.00 0.00 4.79
6666 7660 2.024825 GCTGTGAGATACTCCCTCCGT 61.025 57.143 0.00 0.00 0.00 4.69
6667 7661 0.671251 GCTGTGAGATACTCCCTCCG 59.329 60.000 0.00 0.00 0.00 4.63
6668 7662 1.686052 CTGCTGTGAGATACTCCCTCC 59.314 57.143 0.00 0.00 0.00 4.30
6669 7663 1.686052 CCTGCTGTGAGATACTCCCTC 59.314 57.143 0.00 0.00 0.00 4.30
6670 7664 1.690845 CCCTGCTGTGAGATACTCCCT 60.691 57.143 0.00 0.00 0.00 4.20
6671 7665 0.755686 CCCTGCTGTGAGATACTCCC 59.244 60.000 0.00 0.00 0.00 4.30
6672 7666 0.105778 GCCCTGCTGTGAGATACTCC 59.894 60.000 0.00 0.00 0.00 3.85
6673 7667 0.826715 TGCCCTGCTGTGAGATACTC 59.173 55.000 0.00 0.00 0.00 2.59
6674 7668 1.209019 CTTGCCCTGCTGTGAGATACT 59.791 52.381 0.00 0.00 0.00 2.12
6675 7669 1.208052 TCTTGCCCTGCTGTGAGATAC 59.792 52.381 0.00 0.00 0.00 2.24
6780 7774 9.109393 CATTTCCTCGATTTCCTAGTATTTCAA 57.891 33.333 0.00 0.00 0.00 2.69
6797 7791 1.990799 TGAGCACGTACATTTCCTCG 58.009 50.000 0.00 0.00 0.00 4.63
6806 7800 3.215244 CGTTTCAACAATGAGCACGTAC 58.785 45.455 0.00 0.00 38.39 3.67
6809 7803 2.036217 CACGTTTCAACAATGAGCACG 58.964 47.619 9.67 9.67 43.96 5.34
6815 7809 9.773328 ATACAAAGATATCACGTTTCAACAATG 57.227 29.630 5.32 0.00 0.00 2.82
6845 7839 9.967451 AGAGATAATAGGAGAATCAGTCGATAA 57.033 33.333 0.00 0.00 36.25 1.75
6847 7841 9.613428 CTAGAGATAATAGGAGAATCAGTCGAT 57.387 37.037 0.00 0.00 36.25 3.59
6848 7842 8.598916 ACTAGAGATAATAGGAGAATCAGTCGA 58.401 37.037 0.00 0.00 36.25 4.20
6849 7843 8.786826 ACTAGAGATAATAGGAGAATCAGTCG 57.213 38.462 0.00 0.00 36.25 4.18
6850 7844 9.959721 AGACTAGAGATAATAGGAGAATCAGTC 57.040 37.037 0.00 0.00 36.25 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.