Multiple sequence alignment - TraesCS7B01G099600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G099600 chr7B 100.000 3081 0 0 1 3081 113803829 113800749 0.000000e+00 5690.0
1 TraesCS7B01G099600 chr7B 88.855 1633 127 35 491 2106 113540318 113538724 0.000000e+00 1956.0
2 TraesCS7B01G099600 chr7B 88.841 1389 117 15 960 2316 113627015 113625633 0.000000e+00 1672.0
3 TraesCS7B01G099600 chr7B 93.069 1111 66 7 960 2065 113922517 113923621 0.000000e+00 1615.0
4 TraesCS7B01G099600 chr7D 87.528 1812 149 40 478 2263 151770659 151768899 0.000000e+00 2023.0
5 TraesCS7B01G099600 chr7D 91.951 1230 70 19 1 1216 151930021 151931235 0.000000e+00 1696.0
6 TraesCS7B01G099600 chr7D 91.565 1233 72 21 1 1216 151823837 151825054 0.000000e+00 1672.0
7 TraesCS7B01G099600 chr7D 91.227 1174 90 8 927 2096 151917031 151915867 0.000000e+00 1585.0
8 TraesCS7B01G099600 chr7D 86.850 654 47 15 580 1216 151779937 151779306 0.000000e+00 695.0
9 TraesCS7B01G099600 chr7A 86.303 1650 150 36 488 2096 151862242 151863856 0.000000e+00 1725.0
10 TraesCS7B01G099600 chr7A 91.419 1177 88 7 927 2096 151961619 151960449 0.000000e+00 1602.0
11 TraesCS7B01G099600 chr7A 91.139 1185 87 16 960 2137 152342206 152343379 0.000000e+00 1591.0
12 TraesCS7B01G099600 chr7A 89.484 504 27 17 718 1216 152084200 152084682 5.650000e-172 614.0
13 TraesCS7B01G099600 chr7A 92.399 421 30 2 311 729 152083667 152084087 1.580000e-167 599.0
14 TraesCS7B01G099600 chr7A 84.591 318 28 7 582 883 151872810 151873122 2.320000e-76 296.0
15 TraesCS7B01G099600 chr7A 78.042 337 43 16 1 326 152083330 152083646 1.890000e-42 183.0
16 TraesCS7B01G099600 chr7A 81.567 217 19 7 2594 2800 152085930 152086135 3.180000e-35 159.0
17 TraesCS7B01G099600 chr7A 80.788 203 27 6 2744 2944 107549286 107549094 6.880000e-32 148.0
18 TraesCS7B01G099600 chrUn 91.797 1219 77 13 960 2159 235702641 235701427 0.000000e+00 1676.0
19 TraesCS7B01G099600 chrUn 88.841 1389 117 15 960 2316 185555867 185554485 0.000000e+00 1672.0
20 TraesCS7B01G099600 chrUn 91.632 1219 79 13 960 2159 85701041 85702255 0.000000e+00 1664.0
21 TraesCS7B01G099600 chrUn 92.771 166 12 0 2401 2566 389379414 389379579 1.100000e-59 241.0
22 TraesCS7B01G099600 chrUn 95.918 49 2 0 2401 2449 453601037 453600989 2.550000e-11 80.5
23 TraesCS7B01G099600 chr3B 90.811 185 16 1 2382 2566 24818107 24817924 2.370000e-61 246.0
24 TraesCS7B01G099600 chr1B 89.785 186 17 2 2382 2565 665458834 665459019 1.430000e-58 237.0
25 TraesCS7B01G099600 chr2A 82.018 228 26 12 40 258 10237349 10237570 2.440000e-41 180.0
26 TraesCS7B01G099600 chr2A 74.783 345 67 16 2741 3080 621929273 621929602 1.490000e-28 137.0
27 TraesCS7B01G099600 chr6B 76.282 312 64 7 2740 3049 603028742 603029045 1.140000e-34 158.0
28 TraesCS7B01G099600 chr2D 80.952 168 28 1 2395 2562 22504575 22504738 2.490000e-26 130.0
29 TraesCS7B01G099600 chr2D 73.487 347 76 13 2740 3080 479206631 479206967 1.940000e-22 117.0
30 TraesCS7B01G099600 chr4A 94.643 56 2 1 2735 2790 611404610 611404556 5.470000e-13 86.1
31 TraesCS7B01G099600 chr4A 86.076 79 10 1 2734 2812 116881099 116881176 1.970000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G099600 chr7B 113800749 113803829 3080 True 5690.00 5690 100.000 1 3081 1 chr7B.!!$R3 3080
1 TraesCS7B01G099600 chr7B 113538724 113540318 1594 True 1956.00 1956 88.855 491 2106 1 chr7B.!!$R1 1615
2 TraesCS7B01G099600 chr7B 113625633 113627015 1382 True 1672.00 1672 88.841 960 2316 1 chr7B.!!$R2 1356
3 TraesCS7B01G099600 chr7B 113922517 113923621 1104 False 1615.00 1615 93.069 960 2065 1 chr7B.!!$F1 1105
4 TraesCS7B01G099600 chr7D 151768899 151770659 1760 True 2023.00 2023 87.528 478 2263 1 chr7D.!!$R1 1785
5 TraesCS7B01G099600 chr7D 151930021 151931235 1214 False 1696.00 1696 91.951 1 1216 1 chr7D.!!$F2 1215
6 TraesCS7B01G099600 chr7D 151823837 151825054 1217 False 1672.00 1672 91.565 1 1216 1 chr7D.!!$F1 1215
7 TraesCS7B01G099600 chr7D 151915867 151917031 1164 True 1585.00 1585 91.227 927 2096 1 chr7D.!!$R3 1169
8 TraesCS7B01G099600 chr7D 151779306 151779937 631 True 695.00 695 86.850 580 1216 1 chr7D.!!$R2 636
9 TraesCS7B01G099600 chr7A 151862242 151863856 1614 False 1725.00 1725 86.303 488 2096 1 chr7A.!!$F1 1608
10 TraesCS7B01G099600 chr7A 151960449 151961619 1170 True 1602.00 1602 91.419 927 2096 1 chr7A.!!$R2 1169
11 TraesCS7B01G099600 chr7A 152342206 152343379 1173 False 1591.00 1591 91.139 960 2137 1 chr7A.!!$F3 1177
12 TraesCS7B01G099600 chr7A 152083330 152086135 2805 False 388.75 614 85.373 1 2800 4 chr7A.!!$F4 2799
13 TraesCS7B01G099600 chrUn 235701427 235702641 1214 True 1676.00 1676 91.797 960 2159 1 chrUn.!!$R2 1199
14 TraesCS7B01G099600 chrUn 185554485 185555867 1382 True 1672.00 1672 88.841 960 2316 1 chrUn.!!$R1 1356
15 TraesCS7B01G099600 chrUn 85701041 85702255 1214 False 1664.00 1664 91.632 960 2159 1 chrUn.!!$F1 1199

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 552 1.073964 CAACAGAGATCACAGCACGG 58.926 55.0 0.0 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2386 2719 0.105039 GCTGTTCGTAGGCCTAGCAT 59.895 55.0 14.38 0.0 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 58 4.832608 GGGATCCGCCACCGTGAC 62.833 72.222 5.45 0.00 38.95 3.67
50 60 4.077184 GATCCGCCACCGTGACCA 62.077 66.667 0.00 0.00 0.00 4.02
119 131 3.490890 GCGAGAAGGCGAAATGCT 58.509 55.556 0.00 0.00 45.43 3.79
166 178 2.217038 GCCTGGTGGTGTCCTCTGA 61.217 63.158 0.00 0.00 35.27 3.27
169 181 1.152631 TGGTGGTGTCCTCTGACGA 60.153 57.895 0.00 0.00 44.86 4.20
274 289 2.360600 TACGTGGGCCATGGCAAC 60.361 61.111 36.56 29.98 44.11 4.17
309 360 4.184629 AGTATTGACAATTCCTGAGCGTC 58.815 43.478 5.89 0.00 0.00 5.19
391 443 4.686972 TCTTGTAGAGAGCATTCATTCGG 58.313 43.478 0.00 0.00 0.00 4.30
441 494 3.726782 GCCGTTACTGGCGTTCTTTAATG 60.727 47.826 2.91 0.00 46.75 1.90
499 552 1.073964 CAACAGAGATCACAGCACGG 58.926 55.000 0.00 0.00 0.00 4.94
610 666 5.886960 AGTTATTCTCTTGGTGCAATCAC 57.113 39.130 0.00 0.00 42.40 3.06
627 683 6.988580 TGCAATCACTAACCTAATCAGATCAG 59.011 38.462 0.00 0.00 0.00 2.90
701 770 2.612972 GGACGACACACTGGTCATGAAT 60.613 50.000 0.00 0.00 37.66 2.57
752 960 5.730568 GCATTATTTGACTGGTTCGCTTAGG 60.731 44.000 0.00 0.00 0.00 2.69
753 961 2.922740 TTTGACTGGTTCGCTTAGGT 57.077 45.000 0.00 0.00 0.00 3.08
834 1044 3.124270 TGCATACGCAGCAACCGG 61.124 61.111 0.00 0.00 45.36 5.28
891 1112 5.507817 CGTAACCGGCCATCTATAAGTACAA 60.508 44.000 0.00 0.00 0.00 2.41
892 1113 4.332428 ACCGGCCATCTATAAGTACAAC 57.668 45.455 0.00 0.00 0.00 3.32
926 1151 5.220700 GGACAGAGATCACTCAAGTAGTACG 60.221 48.000 0.00 0.00 44.79 3.67
930 1155 6.964370 CAGAGATCACTCAAGTAGTACGAAAG 59.036 42.308 0.00 0.00 44.79 2.62
946 1171 2.225019 CGAAAGCATTCTTGTCTGCAGT 59.775 45.455 14.67 0.00 40.88 4.40
953 1178 4.436584 GCATTCTTGTCTGCAGTCACATAC 60.437 45.833 13.37 3.57 38.28 2.39
954 1179 4.335400 TTCTTGTCTGCAGTCACATACA 57.665 40.909 13.37 6.36 0.00 2.29
955 1180 3.917988 TCTTGTCTGCAGTCACATACAG 58.082 45.455 13.37 8.04 29.66 2.74
956 1181 3.321968 TCTTGTCTGCAGTCACATACAGT 59.678 43.478 13.37 0.00 29.66 3.55
957 1182 4.522789 TCTTGTCTGCAGTCACATACAGTA 59.477 41.667 13.37 0.00 29.66 2.74
966 1193 5.006746 GCAGTCACATACAGTAGTAATTGGC 59.993 44.000 0.00 0.00 33.13 4.52
974 1201 5.986004 ACAGTAGTAATTGGCGCTTAATC 57.014 39.130 7.64 0.00 0.00 1.75
1221 1460 3.259876 ACTGCTTCGTCAGGGTACATAAA 59.740 43.478 0.00 0.00 38.36 1.40
1384 1640 1.004560 CAACAAGAGCCTGCGAGGA 60.005 57.895 6.40 0.00 37.67 3.71
1713 1969 1.290955 CCGACCGGCTCTACAACAA 59.709 57.895 0.00 0.00 0.00 2.83
2191 2502 9.968743 GTTACTTAGTAAATCATTTCTTGTCCG 57.031 33.333 6.38 0.00 29.42 4.79
2213 2524 0.105964 GACCATGGCGCACCTACATA 59.894 55.000 13.04 0.00 36.63 2.29
2215 2526 1.221466 CCATGGCGCACCTACATACG 61.221 60.000 10.83 0.00 36.63 3.06
2217 2528 0.177141 ATGGCGCACCTACATACGTT 59.823 50.000 10.83 0.00 36.63 3.99
2221 2539 1.589779 GCGCACCTACATACGTTAACC 59.410 52.381 0.30 0.00 0.00 2.85
2227 2545 5.180271 CACCTACATACGTTAACCCATGTT 58.820 41.667 19.31 5.14 38.52 2.71
2233 2551 2.243810 ACGTTAACCCATGTTTGGCAT 58.756 42.857 0.00 0.00 42.15 4.40
2244 2562 4.690280 CCATGTTTGGCATTAGTGTTTTCC 59.310 41.667 0.00 0.00 35.85 3.13
2263 2581 0.249784 CTGTGTCACTGAGTGCTGCT 60.250 55.000 7.93 0.00 32.98 4.24
2264 2582 0.178767 TGTGTCACTGAGTGCTGCTT 59.821 50.000 7.93 0.00 32.98 3.91
2288 2621 8.668510 TTATCAAGGATAGCAAGTCATCTTTC 57.331 34.615 0.00 0.00 0.00 2.62
2291 2624 3.118629 AGGATAGCAAGTCATCTTTCGCA 60.119 43.478 0.00 0.00 0.00 5.10
2325 2658 9.699703 AAGAGATAAGTACACTTTTCAACTCTC 57.300 33.333 12.93 9.28 36.70 3.20
2326 2659 8.861086 AGAGATAAGTACACTTTTCAACTCTCA 58.139 33.333 12.93 0.00 36.70 3.27
2327 2660 9.477484 GAGATAAGTACACTTTTCAACTCTCAA 57.523 33.333 12.93 0.00 36.70 3.02
2328 2661 9.262358 AGATAAGTACACTTTTCAACTCTCAAC 57.738 33.333 12.93 0.00 36.70 3.18
2330 2663 7.865706 AAGTACACTTTTCAACTCTCAACAT 57.134 32.000 0.00 0.00 30.82 2.71
2331 2664 8.958119 AAGTACACTTTTCAACTCTCAACATA 57.042 30.769 0.00 0.00 30.82 2.29
2334 2667 7.624360 ACACTTTTCAACTCTCAACATAACA 57.376 32.000 0.00 0.00 0.00 2.41
2335 2668 8.050778 ACACTTTTCAACTCTCAACATAACAA 57.949 30.769 0.00 0.00 0.00 2.83
2336 2669 8.686334 ACACTTTTCAACTCTCAACATAACAAT 58.314 29.630 0.00 0.00 0.00 2.71
2352 2685 7.436536 CATAACAATATGTTTCGAAACCAGC 57.563 36.000 32.14 13.03 41.45 4.85
2356 2689 0.598065 ATGTTTCGAAACCAGCCAGC 59.402 50.000 32.14 10.64 38.11 4.85
2363 2696 1.544724 GAAACCAGCCAGCCATACAA 58.455 50.000 0.00 0.00 0.00 2.41
2374 2707 4.394300 GCCAGCCATACAATGACTATCATC 59.606 45.833 0.00 0.00 35.76 2.92
2375 2708 5.802465 CCAGCCATACAATGACTATCATCT 58.198 41.667 0.00 0.00 35.76 2.90
2378 2711 7.160049 CAGCCATACAATGACTATCATCTTCT 58.840 38.462 0.00 0.00 35.76 2.85
2379 2712 7.331440 CAGCCATACAATGACTATCATCTTCTC 59.669 40.741 0.00 0.00 35.76 2.87
2380 2713 6.593382 GCCATACAATGACTATCATCTTCTCC 59.407 42.308 0.00 0.00 35.76 3.71
2381 2714 7.102346 CCATACAATGACTATCATCTTCTCCC 58.898 42.308 0.00 0.00 35.76 4.30
2382 2715 7.256439 CCATACAATGACTATCATCTTCTCCCA 60.256 40.741 0.00 0.00 35.76 4.37
2383 2716 6.566079 ACAATGACTATCATCTTCTCCCAA 57.434 37.500 0.00 0.00 35.76 4.12
2384 2717 6.962182 ACAATGACTATCATCTTCTCCCAAA 58.038 36.000 0.00 0.00 35.76 3.28
2385 2718 7.405292 ACAATGACTATCATCTTCTCCCAAAA 58.595 34.615 0.00 0.00 35.76 2.44
2386 2719 7.890127 ACAATGACTATCATCTTCTCCCAAAAA 59.110 33.333 0.00 0.00 35.76 1.94
2387 2720 8.910944 CAATGACTATCATCTTCTCCCAAAAAT 58.089 33.333 0.00 0.00 35.76 1.82
2388 2721 7.870509 TGACTATCATCTTCTCCCAAAAATG 57.129 36.000 0.00 0.00 0.00 2.32
2389 2722 6.319658 TGACTATCATCTTCTCCCAAAAATGC 59.680 38.462 0.00 0.00 0.00 3.56
2390 2723 6.430007 ACTATCATCTTCTCCCAAAAATGCT 58.570 36.000 0.00 0.00 0.00 3.79
2391 2724 7.577303 ACTATCATCTTCTCCCAAAAATGCTA 58.423 34.615 0.00 0.00 0.00 3.49
2392 2725 6.956202 ATCATCTTCTCCCAAAAATGCTAG 57.044 37.500 0.00 0.00 0.00 3.42
2393 2726 5.195940 TCATCTTCTCCCAAAAATGCTAGG 58.804 41.667 0.00 0.00 0.00 3.02
2394 2727 3.356290 TCTTCTCCCAAAAATGCTAGGC 58.644 45.455 0.00 0.00 0.00 3.93
2395 2728 2.143876 TCTCCCAAAAATGCTAGGCC 57.856 50.000 0.00 0.00 0.00 5.19
2396 2729 1.640670 TCTCCCAAAAATGCTAGGCCT 59.359 47.619 11.78 11.78 0.00 5.19
2397 2730 2.849943 TCTCCCAAAAATGCTAGGCCTA 59.150 45.455 13.09 13.09 0.00 3.93
2398 2731 2.952310 CTCCCAAAAATGCTAGGCCTAC 59.048 50.000 8.91 6.89 0.00 3.18
2399 2732 1.676006 CCCAAAAATGCTAGGCCTACG 59.324 52.381 8.91 6.62 0.00 3.51
2400 2733 2.639065 CCAAAAATGCTAGGCCTACGA 58.361 47.619 8.91 0.00 0.00 3.43
2401 2734 3.013921 CCAAAAATGCTAGGCCTACGAA 58.986 45.455 8.91 0.00 0.00 3.85
2402 2735 3.181500 CCAAAAATGCTAGGCCTACGAAC 60.181 47.826 8.91 0.00 0.00 3.95
2403 2736 3.343941 AAAATGCTAGGCCTACGAACA 57.656 42.857 8.91 5.44 0.00 3.18
2404 2737 2.604046 AATGCTAGGCCTACGAACAG 57.396 50.000 8.91 0.00 0.00 3.16
2405 2738 0.105039 ATGCTAGGCCTACGAACAGC 59.895 55.000 8.91 12.46 0.00 4.40
2406 2739 0.970937 TGCTAGGCCTACGAACAGCT 60.971 55.000 20.75 0.00 0.00 4.24
2407 2740 0.528684 GCTAGGCCTACGAACAGCTG 60.529 60.000 13.48 13.48 0.00 4.24
2408 2741 0.818296 CTAGGCCTACGAACAGCTGT 59.182 55.000 15.25 15.25 0.00 4.40
2409 2742 1.204941 CTAGGCCTACGAACAGCTGTT 59.795 52.381 31.57 31.57 41.64 3.16
2410 2743 1.263356 AGGCCTACGAACAGCTGTTA 58.737 50.000 31.20 15.70 38.56 2.41
2411 2744 1.067071 AGGCCTACGAACAGCTGTTAC 60.067 52.381 31.20 21.78 38.56 2.50
2412 2745 0.989890 GCCTACGAACAGCTGTTACG 59.010 55.000 31.20 31.39 38.56 3.18
2413 2746 1.668047 GCCTACGAACAGCTGTTACGT 60.668 52.381 35.93 35.93 41.18 3.57
2414 2747 2.414559 GCCTACGAACAGCTGTTACGTA 60.415 50.000 34.99 34.99 39.97 3.57
2415 2748 3.825308 CCTACGAACAGCTGTTACGTAA 58.175 45.455 35.66 27.25 40.15 3.18
2416 2749 3.605486 CCTACGAACAGCTGTTACGTAAC 59.395 47.826 35.66 27.65 40.15 2.50
2417 2750 2.397549 ACGAACAGCTGTTACGTAACC 58.602 47.619 34.63 21.64 38.74 2.85
2418 2751 2.035066 ACGAACAGCTGTTACGTAACCT 59.965 45.455 34.63 20.16 38.74 3.50
2419 2752 3.253188 ACGAACAGCTGTTACGTAACCTA 59.747 43.478 34.63 15.43 38.74 3.08
2420 2753 3.605486 CGAACAGCTGTTACGTAACCTAC 59.395 47.826 31.20 20.63 38.56 3.18
2421 2754 3.605486 GAACAGCTGTTACGTAACCTACG 59.395 47.826 31.20 19.99 46.96 3.51
2433 2766 5.766702 CGTAACCTACGTAATTTGCTGAA 57.233 39.130 0.00 0.00 46.41 3.02
2434 2767 5.782255 CGTAACCTACGTAATTTGCTGAAG 58.218 41.667 0.00 0.00 46.41 3.02
2435 2768 5.346822 CGTAACCTACGTAATTTGCTGAAGT 59.653 40.000 0.00 0.00 46.41 3.01
2436 2769 5.607119 AACCTACGTAATTTGCTGAAGTG 57.393 39.130 0.00 0.00 0.00 3.16
2437 2770 3.435671 ACCTACGTAATTTGCTGAAGTGC 59.564 43.478 0.00 0.00 0.00 4.40
2438 2771 3.684788 CCTACGTAATTTGCTGAAGTGCT 59.315 43.478 0.00 0.00 0.00 4.40
2439 2772 4.868171 CCTACGTAATTTGCTGAAGTGCTA 59.132 41.667 0.00 0.00 0.00 3.49
2440 2773 5.350365 CCTACGTAATTTGCTGAAGTGCTAA 59.650 40.000 0.00 0.00 32.95 3.09
2441 2774 5.880054 ACGTAATTTGCTGAAGTGCTAAT 57.120 34.783 0.00 0.00 39.33 1.73
2442 2775 5.869350 ACGTAATTTGCTGAAGTGCTAATC 58.131 37.500 0.00 0.00 37.40 1.75
2443 2776 5.411361 ACGTAATTTGCTGAAGTGCTAATCA 59.589 36.000 0.00 0.00 37.40 2.57
2444 2777 6.072728 ACGTAATTTGCTGAAGTGCTAATCAA 60.073 34.615 0.00 0.00 37.40 2.57
2445 2778 6.801377 CGTAATTTGCTGAAGTGCTAATCAAA 59.199 34.615 0.00 0.00 37.40 2.69
2446 2779 7.201266 CGTAATTTGCTGAAGTGCTAATCAAAC 60.201 37.037 0.00 0.00 37.40 2.93
2447 2780 5.772825 TTTGCTGAAGTGCTAATCAAACT 57.227 34.783 0.00 0.00 0.00 2.66
2448 2781 4.754372 TGCTGAAGTGCTAATCAAACTG 57.246 40.909 0.00 0.00 0.00 3.16
2449 2782 3.058016 TGCTGAAGTGCTAATCAAACTGC 60.058 43.478 0.00 0.00 0.00 4.40
2450 2783 3.671702 GCTGAAGTGCTAATCAAACTGCC 60.672 47.826 0.00 0.00 0.00 4.85
2451 2784 2.819608 TGAAGTGCTAATCAAACTGCCC 59.180 45.455 0.00 0.00 0.00 5.36
2452 2785 1.839424 AGTGCTAATCAAACTGCCCC 58.161 50.000 0.00 0.00 0.00 5.80
2453 2786 0.817654 GTGCTAATCAAACTGCCCCC 59.182 55.000 0.00 0.00 0.00 5.40
2491 2824 4.354162 GCCCGTGCCCCCAACTAA 62.354 66.667 0.00 0.00 0.00 2.24
2492 2825 2.680965 CCCGTGCCCCCAACTAAT 59.319 61.111 0.00 0.00 0.00 1.73
2493 2826 1.752694 CCCGTGCCCCCAACTAATG 60.753 63.158 0.00 0.00 0.00 1.90
2494 2827 2.414785 CCGTGCCCCCAACTAATGC 61.415 63.158 0.00 0.00 0.00 3.56
2495 2828 2.414785 CGTGCCCCCAACTAATGCC 61.415 63.158 0.00 0.00 0.00 4.40
2496 2829 2.044451 TGCCCCCAACTAATGCCG 60.044 61.111 0.00 0.00 0.00 5.69
2497 2830 2.274104 GCCCCCAACTAATGCCGA 59.726 61.111 0.00 0.00 0.00 5.54
2498 2831 1.379309 GCCCCCAACTAATGCCGAA 60.379 57.895 0.00 0.00 0.00 4.30
2499 2832 0.755327 GCCCCCAACTAATGCCGAAT 60.755 55.000 0.00 0.00 0.00 3.34
2500 2833 1.318576 CCCCCAACTAATGCCGAATC 58.681 55.000 0.00 0.00 0.00 2.52
2501 2834 1.409521 CCCCCAACTAATGCCGAATCA 60.410 52.381 0.00 0.00 0.00 2.57
2502 2835 2.374184 CCCCAACTAATGCCGAATCAA 58.626 47.619 0.00 0.00 0.00 2.57
2503 2836 2.958355 CCCCAACTAATGCCGAATCAAT 59.042 45.455 0.00 0.00 0.00 2.57
2504 2837 4.141287 CCCCAACTAATGCCGAATCAATA 58.859 43.478 0.00 0.00 0.00 1.90
2505 2838 4.582656 CCCCAACTAATGCCGAATCAATAA 59.417 41.667 0.00 0.00 0.00 1.40
2506 2839 5.507315 CCCCAACTAATGCCGAATCAATAAC 60.507 44.000 0.00 0.00 0.00 1.89
2507 2840 5.299279 CCCAACTAATGCCGAATCAATAACT 59.701 40.000 0.00 0.00 0.00 2.24
2508 2841 6.201517 CCAACTAATGCCGAATCAATAACTG 58.798 40.000 0.00 0.00 0.00 3.16
2509 2842 5.424121 ACTAATGCCGAATCAATAACTGC 57.576 39.130 0.00 0.00 0.00 4.40
2510 2843 3.715628 AATGCCGAATCAATAACTGCC 57.284 42.857 0.00 0.00 0.00 4.85
2511 2844 1.388547 TGCCGAATCAATAACTGCCC 58.611 50.000 0.00 0.00 0.00 5.36
2512 2845 1.340502 TGCCGAATCAATAACTGCCCA 60.341 47.619 0.00 0.00 0.00 5.36
2513 2846 1.065551 GCCGAATCAATAACTGCCCAC 59.934 52.381 0.00 0.00 0.00 4.61
2514 2847 2.643551 CCGAATCAATAACTGCCCACT 58.356 47.619 0.00 0.00 0.00 4.00
2515 2848 3.016736 CCGAATCAATAACTGCCCACTT 58.983 45.455 0.00 0.00 0.00 3.16
2516 2849 3.181497 CCGAATCAATAACTGCCCACTTG 60.181 47.826 0.00 0.00 0.00 3.16
2517 2850 3.181497 CGAATCAATAACTGCCCACTTGG 60.181 47.826 0.00 0.00 37.09 3.61
2530 2863 3.897239 CCCACTTGGCAATTATGTAGGA 58.103 45.455 0.00 0.00 0.00 2.94
2531 2864 4.473444 CCCACTTGGCAATTATGTAGGAT 58.527 43.478 0.00 0.00 0.00 3.24
2532 2865 5.630121 CCCACTTGGCAATTATGTAGGATA 58.370 41.667 0.00 0.00 0.00 2.59
2533 2866 5.473504 CCCACTTGGCAATTATGTAGGATAC 59.526 44.000 0.00 0.00 43.42 2.24
2534 2867 5.179368 CCACTTGGCAATTATGTAGGATACG 59.821 44.000 0.00 0.00 46.99 3.06
2535 2868 5.758296 CACTTGGCAATTATGTAGGATACGT 59.242 40.000 0.00 0.00 46.99 3.57
2536 2869 6.926826 CACTTGGCAATTATGTAGGATACGTA 59.073 38.462 0.00 0.00 46.99 3.57
2547 2880 7.700022 ATGTAGGATACGTAAATCTCCCTAC 57.300 40.000 19.37 19.37 46.99 3.18
2548 2881 5.702670 TGTAGGATACGTAAATCTCCCTACG 59.297 44.000 20.05 0.41 46.99 3.51
2562 2895 1.651987 CCTACGTGGGTGTAGCATTG 58.348 55.000 10.29 0.00 40.40 2.82
2563 2896 1.006832 CTACGTGGGTGTAGCATTGC 58.993 55.000 0.00 0.00 35.80 3.56
2564 2897 0.611200 TACGTGGGTGTAGCATTGCT 59.389 50.000 16.63 16.63 43.41 3.91
2565 2898 0.955428 ACGTGGGTGTAGCATTGCTG 60.955 55.000 21.31 4.20 40.10 4.41
2566 2899 0.955428 CGTGGGTGTAGCATTGCTGT 60.955 55.000 21.31 0.00 40.10 4.40
2567 2900 1.674519 CGTGGGTGTAGCATTGCTGTA 60.675 52.381 21.31 6.98 40.10 2.74
2568 2901 2.643551 GTGGGTGTAGCATTGCTGTAT 58.356 47.619 21.31 0.00 40.10 2.29
2569 2902 2.614057 GTGGGTGTAGCATTGCTGTATC 59.386 50.000 21.31 9.69 40.10 2.24
2570 2903 2.505407 TGGGTGTAGCATTGCTGTATCT 59.495 45.455 21.31 0.00 40.10 1.98
2571 2904 3.054434 TGGGTGTAGCATTGCTGTATCTT 60.054 43.478 21.31 0.00 40.10 2.40
2596 2929 4.729370 TCCACTATTTATCCATTCCCCACA 59.271 41.667 0.00 0.00 0.00 4.17
2597 2930 5.194740 TCCACTATTTATCCATTCCCCACAA 59.805 40.000 0.00 0.00 0.00 3.33
2599 2932 6.364701 CACTATTTATCCATTCCCCACAAGA 58.635 40.000 0.00 0.00 0.00 3.02
2600 2933 6.263168 CACTATTTATCCATTCCCCACAAGAC 59.737 42.308 0.00 0.00 0.00 3.01
2601 2934 3.275617 TTATCCATTCCCCACAAGACG 57.724 47.619 0.00 0.00 0.00 4.18
2602 2935 1.285280 ATCCATTCCCCACAAGACGA 58.715 50.000 0.00 0.00 0.00 4.20
2604 2937 1.026718 CCATTCCCCACAAGACGAGC 61.027 60.000 0.00 0.00 0.00 5.03
2617 2950 4.323843 CGAGCGCCGCCGTACTAT 62.324 66.667 4.98 0.00 36.67 2.12
2618 2951 2.949106 GAGCGCCGCCGTACTATA 59.051 61.111 4.98 0.00 36.67 1.31
2619 2952 1.441682 GAGCGCCGCCGTACTATAC 60.442 63.158 4.98 0.00 36.67 1.47
2620 2953 2.429739 GCGCCGCCGTACTATACC 60.430 66.667 0.00 0.00 36.67 2.73
2621 2954 2.256461 CGCCGCCGTACTATACCC 59.744 66.667 0.00 0.00 0.00 3.69
2623 2956 1.905354 GCCGCCGTACTATACCCCT 60.905 63.158 0.00 0.00 0.00 4.79
2624 2957 1.871126 GCCGCCGTACTATACCCCTC 61.871 65.000 0.00 0.00 0.00 4.30
2625 2958 1.246737 CCGCCGTACTATACCCCTCC 61.247 65.000 0.00 0.00 0.00 4.30
2626 2959 0.538057 CGCCGTACTATACCCCTCCA 60.538 60.000 0.00 0.00 0.00 3.86
2627 2960 1.889699 CGCCGTACTATACCCCTCCAT 60.890 57.143 0.00 0.00 0.00 3.41
2636 2979 5.772004 ACTATACCCCTCCATATCTAGCTG 58.228 45.833 0.00 0.00 0.00 4.24
2644 2987 3.169099 TCCATATCTAGCTGCCTCTTCC 58.831 50.000 0.00 0.00 0.00 3.46
2676 3019 1.227380 GATGACTAGCCCCGCAGTG 60.227 63.158 0.00 0.00 0.00 3.66
2689 3032 1.002502 GCAGTGGTCCACCCTTACC 60.003 63.158 18.80 0.00 34.49 2.85
2690 3033 1.489560 GCAGTGGTCCACCCTTACCT 61.490 60.000 18.80 0.00 36.67 3.08
2691 3034 1.946984 CAGTGGTCCACCCTTACCTA 58.053 55.000 18.80 0.00 36.67 3.08
2692 3035 1.831736 CAGTGGTCCACCCTTACCTAG 59.168 57.143 18.80 0.00 36.67 3.02
2693 3036 1.720533 AGTGGTCCACCCTTACCTAGA 59.279 52.381 18.80 0.00 36.67 2.43
2694 3037 2.108970 GTGGTCCACCCTTACCTAGAG 58.891 57.143 11.30 0.00 36.67 2.43
2695 3038 2.005350 TGGTCCACCCTTACCTAGAGA 58.995 52.381 0.00 0.00 36.67 3.10
2696 3039 2.024273 TGGTCCACCCTTACCTAGAGAG 60.024 54.545 0.00 0.00 36.67 3.20
2703 3046 5.370679 CACCCTTACCTAGAGAGTAGAGAC 58.629 50.000 0.00 0.00 0.00 3.36
2709 3052 2.400399 CTAGAGAGTAGAGACCGCGAG 58.600 57.143 8.23 0.00 0.00 5.03
2723 3066 1.491670 CGCGAGGATGTAATGTCTGG 58.508 55.000 0.00 0.00 0.00 3.86
2726 3069 2.477825 CGAGGATGTAATGTCTGGCTG 58.522 52.381 0.00 0.00 0.00 4.85
2727 3070 2.216898 GAGGATGTAATGTCTGGCTGC 58.783 52.381 0.00 0.00 0.00 5.25
2732 3075 2.862541 TGTAATGTCTGGCTGCTGTTT 58.137 42.857 0.00 0.00 0.00 2.83
2745 3093 0.895559 GCTGTTTCTTGAGGGGGTGG 60.896 60.000 0.00 0.00 0.00 4.61
2800 3152 0.400670 GGCCCCTCCTCCAACTAGAT 60.401 60.000 0.00 0.00 0.00 1.98
2801 3153 1.052617 GCCCCTCCTCCAACTAGATC 58.947 60.000 0.00 0.00 0.00 2.75
2802 3154 1.413808 GCCCCTCCTCCAACTAGATCT 60.414 57.143 0.00 0.00 0.00 2.75
2803 3155 2.604139 CCCCTCCTCCAACTAGATCTC 58.396 57.143 0.00 0.00 0.00 2.75
2804 3156 2.604139 CCCTCCTCCAACTAGATCTCC 58.396 57.143 0.00 0.00 0.00 3.71
2805 3157 2.604139 CCTCCTCCAACTAGATCTCCC 58.396 57.143 0.00 0.00 0.00 4.30
2806 3158 2.604139 CTCCTCCAACTAGATCTCCCC 58.396 57.143 0.00 0.00 0.00 4.81
2807 3159 2.178984 CTCCTCCAACTAGATCTCCCCT 59.821 54.545 0.00 0.00 0.00 4.79
2808 3160 2.178106 TCCTCCAACTAGATCTCCCCTC 59.822 54.545 0.00 0.00 0.00 4.30
2809 3161 2.604139 CTCCAACTAGATCTCCCCTCC 58.396 57.143 0.00 0.00 0.00 4.30
2810 3162 1.220750 TCCAACTAGATCTCCCCTCCC 59.779 57.143 0.00 0.00 0.00 4.30
2811 3163 1.221781 CCAACTAGATCTCCCCTCCCT 59.778 57.143 0.00 0.00 0.00 4.20
2812 3164 2.360854 CCAACTAGATCTCCCCTCCCTT 60.361 54.545 0.00 0.00 0.00 3.95
2813 3165 2.969262 CAACTAGATCTCCCCTCCCTTC 59.031 54.545 0.00 0.00 0.00 3.46
2814 3166 1.146152 ACTAGATCTCCCCTCCCTTCG 59.854 57.143 0.00 0.00 0.00 3.79
2815 3167 0.178958 TAGATCTCCCCTCCCTTCGC 60.179 60.000 0.00 0.00 0.00 4.70
2816 3168 1.458588 GATCTCCCCTCCCTTCGCT 60.459 63.158 0.00 0.00 0.00 4.93
2817 3169 0.178958 GATCTCCCCTCCCTTCGCTA 60.179 60.000 0.00 0.00 0.00 4.26
2818 3170 0.264955 ATCTCCCCTCCCTTCGCTAA 59.735 55.000 0.00 0.00 0.00 3.09
2819 3171 0.264955 TCTCCCCTCCCTTCGCTAAT 59.735 55.000 0.00 0.00 0.00 1.73
2820 3172 1.502039 TCTCCCCTCCCTTCGCTAATA 59.498 52.381 0.00 0.00 0.00 0.98
2821 3173 2.111972 TCTCCCCTCCCTTCGCTAATAT 59.888 50.000 0.00 0.00 0.00 1.28
2822 3174 3.335786 TCTCCCCTCCCTTCGCTAATATA 59.664 47.826 0.00 0.00 0.00 0.86
2823 3175 4.016479 TCTCCCCTCCCTTCGCTAATATAT 60.016 45.833 0.00 0.00 0.00 0.86
2824 3176 5.195146 TCTCCCCTCCCTTCGCTAATATATA 59.805 44.000 0.00 0.00 0.00 0.86
2825 3177 5.206587 TCCCCTCCCTTCGCTAATATATAC 58.793 45.833 0.00 0.00 0.00 1.47
2826 3178 4.344390 CCCCTCCCTTCGCTAATATATACC 59.656 50.000 0.00 0.00 0.00 2.73
2827 3179 4.037684 CCCTCCCTTCGCTAATATATACCG 59.962 50.000 0.00 0.00 0.00 4.02
2828 3180 4.885907 CCTCCCTTCGCTAATATATACCGA 59.114 45.833 0.00 0.00 0.00 4.69
2829 3181 5.359009 CCTCCCTTCGCTAATATATACCGAA 59.641 44.000 11.85 11.85 36.61 4.30
2830 3182 6.040616 CCTCCCTTCGCTAATATATACCGAAT 59.959 42.308 12.46 0.00 37.31 3.34
2831 3183 6.802608 TCCCTTCGCTAATATATACCGAATG 58.197 40.000 12.46 10.59 37.31 2.67
2832 3184 5.983720 CCCTTCGCTAATATATACCGAATGG 59.016 44.000 15.34 15.34 37.36 3.16
2833 3185 5.983720 CCTTCGCTAATATATACCGAATGGG 59.016 44.000 12.46 9.23 40.75 4.00
2834 3186 6.183360 CCTTCGCTAATATATACCGAATGGGA 60.183 42.308 12.46 0.00 40.75 4.37
2835 3187 6.140303 TCGCTAATATATACCGAATGGGAC 57.860 41.667 0.00 0.00 40.75 4.46
2836 3188 5.068198 TCGCTAATATATACCGAATGGGACC 59.932 44.000 0.00 0.00 40.75 4.46
2837 3189 5.608449 GCTAATATATACCGAATGGGACCC 58.392 45.833 2.45 2.45 40.75 4.46
2838 3190 5.454329 GCTAATATATACCGAATGGGACCCC 60.454 48.000 8.45 2.69 40.75 4.95
2839 3191 1.665137 ATATACCGAATGGGACCCCC 58.335 55.000 8.45 0.00 45.71 5.40
2857 3209 3.732159 CCCCCTCCCTAGAGAAACA 57.268 57.895 0.00 0.00 43.39 2.83
2858 3210 1.966845 CCCCCTCCCTAGAGAAACAA 58.033 55.000 0.00 0.00 43.39 2.83
2859 3211 1.840635 CCCCCTCCCTAGAGAAACAAG 59.159 57.143 0.00 0.00 43.39 3.16
2860 3212 2.552367 CCCCTCCCTAGAGAAACAAGT 58.448 52.381 0.00 0.00 43.39 3.16
2861 3213 2.913617 CCCCTCCCTAGAGAAACAAGTT 59.086 50.000 0.00 0.00 43.39 2.66
2862 3214 3.055021 CCCCTCCCTAGAGAAACAAGTTC 60.055 52.174 0.00 0.00 43.39 3.01
2872 3224 4.859629 AGAAACAAGTTCTCGTGTCAAC 57.140 40.909 0.00 0.00 43.49 3.18
2873 3225 4.504858 AGAAACAAGTTCTCGTGTCAACT 58.495 39.130 0.00 0.00 43.49 3.16
2874 3226 4.567159 AGAAACAAGTTCTCGTGTCAACTC 59.433 41.667 0.00 0.00 43.49 3.01
2875 3227 2.460918 ACAAGTTCTCGTGTCAACTCG 58.539 47.619 0.00 0.00 31.38 4.18
2876 3228 1.787155 CAAGTTCTCGTGTCAACTCGG 59.213 52.381 4.96 0.00 31.38 4.63
2877 3229 0.314302 AGTTCTCGTGTCAACTCGGG 59.686 55.000 4.96 1.76 34.94 5.14
2878 3230 1.006571 TTCTCGTGTCAACTCGGGC 60.007 57.895 4.96 0.00 33.78 6.13
2879 3231 1.740332 TTCTCGTGTCAACTCGGGCA 61.740 55.000 4.96 0.00 33.78 5.36
2880 3232 2.022129 CTCGTGTCAACTCGGGCAC 61.022 63.158 4.96 0.00 34.11 5.01
2894 3246 2.075837 GGCACCCCCTTTCTGTAGT 58.924 57.895 0.00 0.00 0.00 2.73
2895 3247 0.404426 GGCACCCCCTTTCTGTAGTT 59.596 55.000 0.00 0.00 0.00 2.24
2896 3248 1.613520 GGCACCCCCTTTCTGTAGTTC 60.614 57.143 0.00 0.00 0.00 3.01
2897 3249 1.351350 GCACCCCCTTTCTGTAGTTCT 59.649 52.381 0.00 0.00 0.00 3.01
2898 3250 2.615747 GCACCCCCTTTCTGTAGTTCTC 60.616 54.545 0.00 0.00 0.00 2.87
2899 3251 2.027100 CACCCCCTTTCTGTAGTTCTCC 60.027 54.545 0.00 0.00 0.00 3.71
2900 3252 2.266279 CCCCCTTTCTGTAGTTCTCCA 58.734 52.381 0.00 0.00 0.00 3.86
2901 3253 2.237392 CCCCCTTTCTGTAGTTCTCCAG 59.763 54.545 0.00 0.00 0.00 3.86
2902 3254 3.173965 CCCCTTTCTGTAGTTCTCCAGA 58.826 50.000 0.00 0.00 35.97 3.86
2903 3255 3.583086 CCCCTTTCTGTAGTTCTCCAGAA 59.417 47.826 4.20 4.20 43.87 3.02
2916 3268 4.687901 TCTCCAGAACAATTGTGAGACA 57.312 40.909 17.78 2.81 0.00 3.41
2917 3269 5.233083 TCTCCAGAACAATTGTGAGACAT 57.767 39.130 17.78 0.66 0.00 3.06
2918 3270 5.240891 TCTCCAGAACAATTGTGAGACATC 58.759 41.667 17.78 9.24 0.00 3.06
2919 3271 3.996363 TCCAGAACAATTGTGAGACATCG 59.004 43.478 12.82 1.97 0.00 3.84
2920 3272 3.425359 CCAGAACAATTGTGAGACATCGC 60.425 47.826 12.82 0.00 36.44 4.58
2921 3273 2.413112 AGAACAATTGTGAGACATCGCG 59.587 45.455 12.82 0.00 38.88 5.87
2922 3274 2.078849 ACAATTGTGAGACATCGCGA 57.921 45.000 13.09 13.09 38.88 5.87
2923 3275 1.995484 ACAATTGTGAGACATCGCGAG 59.005 47.619 16.66 9.51 38.88 5.03
2924 3276 1.325640 CAATTGTGAGACATCGCGAGG 59.674 52.381 20.58 20.58 38.88 4.63
2925 3277 0.532573 ATTGTGAGACATCGCGAGGT 59.467 50.000 28.08 28.08 38.88 3.85
2926 3278 0.317160 TTGTGAGACATCGCGAGGTT 59.683 50.000 28.34 17.09 38.88 3.50
2927 3279 0.388520 TGTGAGACATCGCGAGGTTG 60.389 55.000 28.34 17.22 38.88 3.77
2928 3280 1.446099 TGAGACATCGCGAGGTTGC 60.446 57.895 28.34 21.48 0.00 4.17
2929 3281 1.153745 GAGACATCGCGAGGTTGCT 60.154 57.895 28.34 20.67 0.00 3.91
2930 3282 1.142778 GAGACATCGCGAGGTTGCTC 61.143 60.000 28.34 24.38 0.00 4.26
2931 3283 2.125512 ACATCGCGAGGTTGCTCC 60.126 61.111 22.23 0.00 0.00 4.70
2932 3284 3.257561 CATCGCGAGGTTGCTCCG 61.258 66.667 16.66 0.00 41.99 4.63
2937 3289 4.821589 CGAGGTTGCTCCGCCCTC 62.822 72.222 0.00 0.00 41.15 4.30
2938 3290 4.475135 GAGGTTGCTCCGCCCTCC 62.475 72.222 0.00 0.00 39.10 4.30
2940 3292 4.475135 GGTTGCTCCGCCCTCCTC 62.475 72.222 0.00 0.00 0.00 3.71
2941 3293 3.394836 GTTGCTCCGCCCTCCTCT 61.395 66.667 0.00 0.00 0.00 3.69
2942 3294 2.058595 GTTGCTCCGCCCTCCTCTA 61.059 63.158 0.00 0.00 0.00 2.43
2943 3295 1.758514 TTGCTCCGCCCTCCTCTAG 60.759 63.158 0.00 0.00 0.00 2.43
2944 3296 2.123640 GCTCCGCCCTCCTCTAGT 60.124 66.667 0.00 0.00 0.00 2.57
2945 3297 1.758906 GCTCCGCCCTCCTCTAGTT 60.759 63.158 0.00 0.00 0.00 2.24
2946 3298 1.331399 GCTCCGCCCTCCTCTAGTTT 61.331 60.000 0.00 0.00 0.00 2.66
2947 3299 1.196012 CTCCGCCCTCCTCTAGTTTT 58.804 55.000 0.00 0.00 0.00 2.43
2948 3300 1.137282 CTCCGCCCTCCTCTAGTTTTC 59.863 57.143 0.00 0.00 0.00 2.29
2949 3301 0.178301 CCGCCCTCCTCTAGTTTTCC 59.822 60.000 0.00 0.00 0.00 3.13
2950 3302 0.179108 CGCCCTCCTCTAGTTTTCCG 60.179 60.000 0.00 0.00 0.00 4.30
2951 3303 0.178301 GCCCTCCTCTAGTTTTCCGG 59.822 60.000 0.00 0.00 0.00 5.14
2952 3304 0.178301 CCCTCCTCTAGTTTTCCGGC 59.822 60.000 0.00 0.00 0.00 6.13
2953 3305 0.179108 CCTCCTCTAGTTTTCCGGCG 60.179 60.000 0.00 0.00 0.00 6.46
2954 3306 0.815734 CTCCTCTAGTTTTCCGGCGA 59.184 55.000 9.30 0.00 0.00 5.54
2955 3307 0.529378 TCCTCTAGTTTTCCGGCGAC 59.471 55.000 9.30 0.00 0.00 5.19
2967 3319 4.618513 GGCGACGCTTAGCTCTAG 57.381 61.111 20.77 0.00 0.00 2.43
2968 3320 2.023318 GGCGACGCTTAGCTCTAGA 58.977 57.895 20.77 0.00 0.00 2.43
2969 3321 0.594110 GGCGACGCTTAGCTCTAGAT 59.406 55.000 20.77 0.00 0.00 1.98
2970 3322 1.664588 GGCGACGCTTAGCTCTAGATG 60.665 57.143 20.77 0.00 0.00 2.90
2971 3323 1.664588 GCGACGCTTAGCTCTAGATGG 60.665 57.143 13.73 0.00 0.00 3.51
2972 3324 1.604755 CGACGCTTAGCTCTAGATGGT 59.395 52.381 1.76 0.00 0.00 3.55
2973 3325 2.603412 CGACGCTTAGCTCTAGATGGTG 60.603 54.545 1.76 0.00 0.00 4.17
2974 3326 2.619177 GACGCTTAGCTCTAGATGGTGA 59.381 50.000 1.76 0.00 0.00 4.02
2975 3327 3.024547 ACGCTTAGCTCTAGATGGTGAA 58.975 45.455 1.76 0.00 0.00 3.18
2976 3328 3.181485 ACGCTTAGCTCTAGATGGTGAAC 60.181 47.826 1.76 0.00 0.00 3.18
2977 3329 3.723260 GCTTAGCTCTAGATGGTGAACC 58.277 50.000 0.00 0.00 0.00 3.62
2978 3330 3.797184 GCTTAGCTCTAGATGGTGAACCG 60.797 52.174 0.00 0.00 39.43 4.44
2979 3331 0.461961 AGCTCTAGATGGTGAACCGC 59.538 55.000 0.00 0.00 39.43 5.68
2980 3332 0.175760 GCTCTAGATGGTGAACCGCA 59.824 55.000 0.00 0.00 39.43 5.69
2981 3333 1.804372 GCTCTAGATGGTGAACCGCAG 60.804 57.143 0.00 0.00 39.43 5.18
2982 3334 0.175760 TCTAGATGGTGAACCGCAGC 59.824 55.000 0.00 0.00 45.12 5.25
2983 3335 0.811616 CTAGATGGTGAACCGCAGCC 60.812 60.000 0.00 0.00 44.28 4.85
2984 3336 1.549243 TAGATGGTGAACCGCAGCCA 61.549 55.000 0.00 0.00 44.28 4.75
2985 3337 1.750399 GATGGTGAACCGCAGCCAT 60.750 57.895 0.00 0.00 44.28 4.40
2986 3338 0.463654 GATGGTGAACCGCAGCCATA 60.464 55.000 0.00 0.00 44.28 2.74
2987 3339 0.183492 ATGGTGAACCGCAGCCATAT 59.817 50.000 0.00 0.00 44.28 1.78
2988 3340 0.463654 TGGTGAACCGCAGCCATATC 60.464 55.000 0.00 0.00 44.28 1.63
2989 3341 1.498865 GGTGAACCGCAGCCATATCG 61.499 60.000 0.00 0.00 39.07 2.92
2990 3342 0.810031 GTGAACCGCAGCCATATCGT 60.810 55.000 0.00 0.00 0.00 3.73
2991 3343 0.529773 TGAACCGCAGCCATATCGTC 60.530 55.000 0.00 0.00 0.00 4.20
2992 3344 1.548973 GAACCGCAGCCATATCGTCG 61.549 60.000 0.00 0.00 0.00 5.12
2993 3345 2.011741 AACCGCAGCCATATCGTCGA 62.012 55.000 0.00 0.00 0.00 4.20
2994 3346 1.080501 CCGCAGCCATATCGTCGAT 60.081 57.895 13.16 13.16 0.00 3.59
2995 3347 1.073216 CCGCAGCCATATCGTCGATC 61.073 60.000 11.82 0.00 0.00 3.69
2996 3348 0.109551 CGCAGCCATATCGTCGATCT 60.110 55.000 11.82 0.00 0.00 2.75
2997 3349 1.623359 GCAGCCATATCGTCGATCTC 58.377 55.000 11.82 0.00 0.00 2.75
2998 3350 1.068264 GCAGCCATATCGTCGATCTCA 60.068 52.381 11.82 0.00 0.00 3.27
2999 3351 2.416566 GCAGCCATATCGTCGATCTCAT 60.417 50.000 11.82 0.00 0.00 2.90
3000 3352 3.181496 GCAGCCATATCGTCGATCTCATA 60.181 47.826 11.82 0.00 0.00 2.15
3001 3353 4.498850 GCAGCCATATCGTCGATCTCATAT 60.499 45.833 11.82 0.00 0.00 1.78
3002 3354 4.974888 CAGCCATATCGTCGATCTCATATG 59.025 45.833 11.82 9.26 0.00 1.78
3003 3355 4.037327 AGCCATATCGTCGATCTCATATGG 59.963 45.833 21.85 21.85 46.14 2.74
3004 3356 4.794329 GCCATATCGTCGATCTCATATGGG 60.794 50.000 25.00 13.42 44.60 4.00
3005 3357 4.339530 CCATATCGTCGATCTCATATGGGT 59.660 45.833 19.72 0.00 42.31 4.51
3006 3358 3.857549 ATCGTCGATCTCATATGGGTG 57.142 47.619 0.75 0.00 0.00 4.61
3007 3359 1.269723 TCGTCGATCTCATATGGGTGC 59.730 52.381 1.67 0.00 0.00 5.01
3008 3360 1.000274 CGTCGATCTCATATGGGTGCA 60.000 52.381 1.67 0.00 0.00 4.57
3009 3361 2.545742 CGTCGATCTCATATGGGTGCAA 60.546 50.000 1.67 0.00 0.00 4.08
3010 3362 3.668447 GTCGATCTCATATGGGTGCAAT 58.332 45.455 1.67 0.00 0.00 3.56
3011 3363 3.681897 GTCGATCTCATATGGGTGCAATC 59.318 47.826 1.67 0.00 0.00 2.67
3012 3364 3.580022 TCGATCTCATATGGGTGCAATCT 59.420 43.478 1.67 0.00 0.00 2.40
3013 3365 3.683340 CGATCTCATATGGGTGCAATCTG 59.317 47.826 1.67 0.00 0.00 2.90
3014 3366 4.649692 GATCTCATATGGGTGCAATCTGT 58.350 43.478 1.67 0.00 0.00 3.41
3015 3367 5.567423 CGATCTCATATGGGTGCAATCTGTA 60.567 44.000 1.67 0.00 0.00 2.74
3016 3368 5.219343 TCTCATATGGGTGCAATCTGTAG 57.781 43.478 1.67 0.00 0.00 2.74
3017 3369 4.901250 TCTCATATGGGTGCAATCTGTAGA 59.099 41.667 1.67 0.00 0.00 2.59
3018 3370 5.545335 TCTCATATGGGTGCAATCTGTAGAT 59.455 40.000 1.67 0.00 36.07 1.98
3019 3371 6.725834 TCTCATATGGGTGCAATCTGTAGATA 59.274 38.462 1.67 0.00 33.73 1.98
3020 3372 6.939622 TCATATGGGTGCAATCTGTAGATAG 58.060 40.000 2.13 0.00 33.73 2.08
3021 3373 6.725834 TCATATGGGTGCAATCTGTAGATAGA 59.274 38.462 2.13 0.00 33.73 1.98
3022 3374 4.672587 TGGGTGCAATCTGTAGATAGAC 57.327 45.455 0.00 0.00 33.73 2.59
3023 3375 3.388024 TGGGTGCAATCTGTAGATAGACC 59.612 47.826 0.00 2.42 33.73 3.85
3024 3376 3.388024 GGGTGCAATCTGTAGATAGACCA 59.612 47.826 14.13 1.76 32.80 4.02
3025 3377 4.040952 GGGTGCAATCTGTAGATAGACCAT 59.959 45.833 14.13 0.00 32.80 3.55
3026 3378 4.993584 GGTGCAATCTGTAGATAGACCATG 59.006 45.833 0.00 0.00 33.73 3.66
3027 3379 4.450419 GTGCAATCTGTAGATAGACCATGC 59.550 45.833 0.00 6.91 35.95 4.06
3028 3380 4.346127 TGCAATCTGTAGATAGACCATGCT 59.654 41.667 12.50 0.00 36.18 3.79
3029 3381 5.163269 TGCAATCTGTAGATAGACCATGCTT 60.163 40.000 12.50 0.00 36.18 3.91
3030 3382 5.762218 GCAATCTGTAGATAGACCATGCTTT 59.238 40.000 6.69 0.00 34.19 3.51
3031 3383 6.261826 GCAATCTGTAGATAGACCATGCTTTT 59.738 38.462 6.69 0.00 34.19 2.27
3032 3384 7.637229 CAATCTGTAGATAGACCATGCTTTTG 58.363 38.462 0.00 0.00 33.73 2.44
3033 3385 6.544928 TCTGTAGATAGACCATGCTTTTGA 57.455 37.500 0.00 0.00 0.00 2.69
3034 3386 6.341316 TCTGTAGATAGACCATGCTTTTGAC 58.659 40.000 0.00 0.00 0.00 3.18
3035 3387 5.428253 TGTAGATAGACCATGCTTTTGACC 58.572 41.667 0.00 0.00 0.00 4.02
3036 3388 4.851639 AGATAGACCATGCTTTTGACCT 57.148 40.909 0.00 0.00 0.00 3.85
3037 3389 5.184892 AGATAGACCATGCTTTTGACCTT 57.815 39.130 0.00 0.00 0.00 3.50
3038 3390 5.574188 AGATAGACCATGCTTTTGACCTTT 58.426 37.500 0.00 0.00 0.00 3.11
3039 3391 5.416952 AGATAGACCATGCTTTTGACCTTTG 59.583 40.000 0.00 0.00 0.00 2.77
3040 3392 3.299503 AGACCATGCTTTTGACCTTTGT 58.700 40.909 0.00 0.00 0.00 2.83
3041 3393 3.706086 AGACCATGCTTTTGACCTTTGTT 59.294 39.130 0.00 0.00 0.00 2.83
3042 3394 4.162131 AGACCATGCTTTTGACCTTTGTTT 59.838 37.500 0.00 0.00 0.00 2.83
3043 3395 5.362430 AGACCATGCTTTTGACCTTTGTTTA 59.638 36.000 0.00 0.00 0.00 2.01
3044 3396 5.600696 ACCATGCTTTTGACCTTTGTTTAG 58.399 37.500 0.00 0.00 0.00 1.85
3045 3397 4.990426 CCATGCTTTTGACCTTTGTTTAGG 59.010 41.667 0.00 0.00 41.31 2.69
3046 3398 4.664150 TGCTTTTGACCTTTGTTTAGGG 57.336 40.909 0.00 0.00 39.76 3.53
3047 3399 4.282496 TGCTTTTGACCTTTGTTTAGGGA 58.718 39.130 0.00 0.00 39.76 4.20
3048 3400 4.098807 TGCTTTTGACCTTTGTTTAGGGAC 59.901 41.667 0.00 0.00 39.76 4.46
3049 3401 4.500887 GCTTTTGACCTTTGTTTAGGGACC 60.501 45.833 0.00 0.00 39.76 4.46
3050 3402 2.554370 TGACCTTTGTTTAGGGACCG 57.446 50.000 0.00 0.00 39.76 4.79
3051 3403 1.770061 TGACCTTTGTTTAGGGACCGT 59.230 47.619 0.00 0.00 39.76 4.83
3052 3404 2.173143 TGACCTTTGTTTAGGGACCGTT 59.827 45.455 0.00 0.00 39.76 4.44
3053 3405 2.810274 GACCTTTGTTTAGGGACCGTTC 59.190 50.000 0.00 0.00 39.76 3.95
3054 3406 1.802365 CCTTTGTTTAGGGACCGTTCG 59.198 52.381 0.00 0.00 0.00 3.95
3055 3407 2.486918 CTTTGTTTAGGGACCGTTCGT 58.513 47.619 0.00 0.00 0.00 3.85
3056 3408 1.868469 TTGTTTAGGGACCGTTCGTG 58.132 50.000 0.00 0.00 0.00 4.35
3057 3409 0.752054 TGTTTAGGGACCGTTCGTGT 59.248 50.000 0.00 0.00 0.00 4.49
3058 3410 1.142474 GTTTAGGGACCGTTCGTGTG 58.858 55.000 0.00 0.00 0.00 3.82
3059 3411 1.039068 TTTAGGGACCGTTCGTGTGA 58.961 50.000 0.00 0.00 0.00 3.58
3060 3412 0.314935 TTAGGGACCGTTCGTGTGAC 59.685 55.000 0.00 0.00 0.00 3.67
3061 3413 1.855213 TAGGGACCGTTCGTGTGACG 61.855 60.000 0.00 0.00 44.19 4.35
3066 3418 2.834560 CGTTCGTGTGACGGTTCG 59.165 61.111 0.00 0.00 42.81 3.95
3067 3419 1.655046 CGTTCGTGTGACGGTTCGA 60.655 57.895 0.00 0.00 42.81 3.71
3068 3420 1.594269 CGTTCGTGTGACGGTTCGAG 61.594 60.000 0.00 0.00 42.81 4.04
3069 3421 1.008194 TTCGTGTGACGGTTCGAGG 60.008 57.895 0.00 0.00 42.81 4.63
3070 3422 2.410638 TTCGTGTGACGGTTCGAGGG 62.411 60.000 0.00 0.00 42.81 4.30
3071 3423 2.737376 GTGTGACGGTTCGAGGGC 60.737 66.667 0.00 0.00 0.00 5.19
3072 3424 2.915659 TGTGACGGTTCGAGGGCT 60.916 61.111 0.00 0.00 0.00 5.19
3073 3425 2.342648 GTGACGGTTCGAGGGCTT 59.657 61.111 0.00 0.00 0.00 4.35
3074 3426 1.737008 GTGACGGTTCGAGGGCTTC 60.737 63.158 0.00 0.00 0.00 3.86
3075 3427 2.204461 TGACGGTTCGAGGGCTTCA 61.204 57.895 0.00 0.00 0.00 3.02
3076 3428 1.005394 GACGGTTCGAGGGCTTCAA 60.005 57.895 0.00 0.00 0.00 2.69
3077 3429 1.004918 ACGGTTCGAGGGCTTCAAG 60.005 57.895 0.00 0.00 0.00 3.02
3078 3430 1.292223 CGGTTCGAGGGCTTCAAGA 59.708 57.895 0.00 0.00 0.00 3.02
3079 3431 0.320421 CGGTTCGAGGGCTTCAAGAA 60.320 55.000 0.00 0.00 0.00 2.52
3080 3432 1.157585 GGTTCGAGGGCTTCAAGAAC 58.842 55.000 8.28 8.28 40.09 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 102 4.441695 CTTCTCGCGCAGGGCTCA 62.442 66.667 8.75 0.00 41.64 4.26
151 163 1.152631 TCGTCAGAGGACACCACCA 60.153 57.895 0.00 0.00 44.54 4.17
154 166 2.265904 CCGTCGTCAGAGGACACCA 61.266 63.158 20.52 0.00 44.54 4.17
155 167 2.567049 CCGTCGTCAGAGGACACC 59.433 66.667 20.52 0.00 44.54 4.16
157 169 3.733960 CGCCGTCGTCAGAGGACA 61.734 66.667 20.52 0.00 44.54 4.02
330 382 2.186903 CCATCCGGGAGTGTTCCG 59.813 66.667 0.00 0.00 45.04 4.30
391 443 5.163982 CGTTTCTTTAGAAAGATCACCCGAC 60.164 44.000 5.57 0.00 43.92 4.79
421 474 4.657075 ACATTAAAGAACGCCAGTAACG 57.343 40.909 0.00 0.00 0.00 3.18
441 494 0.252197 ACTATGCCTCCGGACCAAAC 59.748 55.000 0.00 0.00 0.00 2.93
499 552 5.362556 TTGTGCAAAGTAAAGATCTCAGC 57.637 39.130 0.00 0.00 0.00 4.26
610 666 4.938080 ACGCACTGATCTGATTAGGTTAG 58.062 43.478 13.23 5.12 0.00 2.34
648 704 4.903054 TGCCATCAATCTATCATCTGTCC 58.097 43.478 0.00 0.00 0.00 4.02
891 1112 1.040646 TCTCTGTCCTTGCAACTCGT 58.959 50.000 0.00 0.00 0.00 4.18
892 1113 2.266554 GATCTCTGTCCTTGCAACTCG 58.733 52.381 0.00 0.00 0.00 4.18
926 1151 3.251729 TGACTGCAGACAAGAATGCTTTC 59.748 43.478 23.35 2.73 42.98 2.62
930 1155 1.875514 TGTGACTGCAGACAAGAATGC 59.124 47.619 23.35 7.97 42.86 3.56
946 1171 4.116961 GCGCCAATTACTACTGTATGTGA 58.883 43.478 0.00 0.00 0.00 3.58
953 1178 4.814234 TGGATTAAGCGCCAATTACTACTG 59.186 41.667 2.29 0.00 0.00 2.74
954 1179 5.031066 TGGATTAAGCGCCAATTACTACT 57.969 39.130 2.29 0.00 0.00 2.57
955 1180 5.744666 TTGGATTAAGCGCCAATTACTAC 57.255 39.130 2.29 0.00 39.14 2.73
1221 1460 5.354234 CAGCAGAAATACAAGAACGGGTAAT 59.646 40.000 0.00 0.00 0.00 1.89
1675 1931 1.154225 GAAAGACGGGCAATGTGCG 60.154 57.895 0.00 0.00 46.21 5.34
1678 1934 2.332654 GGCGAAAGACGGGCAATGT 61.333 57.895 0.00 0.00 42.83 2.71
2123 2400 4.338400 CACCACAGTGGATAATACGAGAGA 59.662 45.833 27.39 0.00 40.96 3.10
2124 2401 4.611943 CACCACAGTGGATAATACGAGAG 58.388 47.826 27.39 0.00 40.96 3.20
2179 2490 3.127548 CCATGGTCTTCGGACAAGAAATG 59.872 47.826 2.57 0.00 46.11 2.32
2191 2502 1.090052 GTAGGTGCGCCATGGTCTTC 61.090 60.000 20.59 2.21 37.19 2.87
2213 2524 1.693627 TGCCAAACATGGGTTAACGT 58.306 45.000 0.00 0.00 35.82 3.99
2215 2526 5.167845 CACTAATGCCAAACATGGGTTAAC 58.832 41.667 0.00 0.00 39.60 2.01
2217 2528 4.411927 ACACTAATGCCAAACATGGGTTA 58.588 39.130 0.00 0.00 39.60 2.85
2221 2539 4.690280 GGAAAACACTAATGCCAAACATGG 59.310 41.667 0.00 0.00 39.60 3.66
2227 2545 3.957497 ACACAGGAAAACACTAATGCCAA 59.043 39.130 0.00 0.00 0.00 4.52
2233 2551 5.092554 TCAGTGACACAGGAAAACACTAA 57.907 39.130 8.59 0.00 39.33 2.24
2244 2562 0.249784 AGCAGCACTCAGTGACACAG 60.250 55.000 9.70 0.00 35.23 3.66
2263 2581 7.439356 CGAAAGATGACTTGCTATCCTTGATAA 59.561 37.037 0.00 0.00 36.39 1.75
2264 2582 6.925718 CGAAAGATGACTTGCTATCCTTGATA 59.074 38.462 0.00 0.00 36.39 2.15
2288 2621 5.571741 TGTACTTATCTCTTTTCGTTCTGCG 59.428 40.000 0.00 0.00 43.01 5.18
2291 2624 9.543783 AAAAGTGTACTTATCTCTTTTCGTTCT 57.456 29.630 0.00 0.00 35.28 3.01
2310 2643 7.624360 TGTTATGTTGAGAGTTGAAAAGTGT 57.376 32.000 0.00 0.00 0.00 3.55
2328 2661 6.472163 GGCTGGTTTCGAAACATATTGTTATG 59.528 38.462 34.79 14.95 40.14 1.90
2330 2663 5.473846 TGGCTGGTTTCGAAACATATTGTTA 59.526 36.000 34.79 15.04 40.14 2.41
2331 2664 4.279671 TGGCTGGTTTCGAAACATATTGTT 59.720 37.500 34.79 0.00 43.41 2.83
2334 2667 3.119495 GCTGGCTGGTTTCGAAACATATT 60.119 43.478 34.79 0.00 40.63 1.28
2335 2668 2.423538 GCTGGCTGGTTTCGAAACATAT 59.576 45.455 34.79 0.00 40.63 1.78
2336 2669 1.810151 GCTGGCTGGTTTCGAAACATA 59.190 47.619 34.79 24.09 40.63 2.29
2343 2676 0.676466 TGTATGGCTGGCTGGTTTCG 60.676 55.000 2.00 0.00 0.00 3.46
2347 2680 0.625316 TCATTGTATGGCTGGCTGGT 59.375 50.000 2.00 0.00 0.00 4.00
2352 2685 5.802465 AGATGATAGTCATTGTATGGCTGG 58.198 41.667 4.14 0.00 46.32 4.85
2356 2689 7.102346 GGGAGAAGATGATAGTCATTGTATGG 58.898 42.308 0.00 0.00 37.20 2.74
2363 2696 7.014038 GCATTTTTGGGAGAAGATGATAGTCAT 59.986 37.037 0.00 0.00 40.34 3.06
2374 2707 2.428530 GGCCTAGCATTTTTGGGAGAAG 59.571 50.000 0.00 0.00 0.00 2.85
2375 2708 2.042979 AGGCCTAGCATTTTTGGGAGAA 59.957 45.455 1.29 0.00 0.00 2.87
2378 2711 2.682563 CGTAGGCCTAGCATTTTTGGGA 60.683 50.000 14.38 0.00 0.00 4.37
2379 2712 1.676006 CGTAGGCCTAGCATTTTTGGG 59.324 52.381 14.38 0.00 0.00 4.12
2380 2713 2.639065 TCGTAGGCCTAGCATTTTTGG 58.361 47.619 14.38 0.00 0.00 3.28
2381 2714 3.438781 TGTTCGTAGGCCTAGCATTTTTG 59.561 43.478 14.38 0.00 0.00 2.44
2382 2715 3.681593 TGTTCGTAGGCCTAGCATTTTT 58.318 40.909 14.38 0.00 0.00 1.94
2383 2716 3.270877 CTGTTCGTAGGCCTAGCATTTT 58.729 45.455 14.38 0.00 0.00 1.82
2384 2717 2.906354 CTGTTCGTAGGCCTAGCATTT 58.094 47.619 14.38 0.00 0.00 2.32
2385 2718 1.473434 GCTGTTCGTAGGCCTAGCATT 60.473 52.381 14.38 0.00 0.00 3.56
2386 2719 0.105039 GCTGTTCGTAGGCCTAGCAT 59.895 55.000 14.38 0.00 0.00 3.79
2387 2720 0.970937 AGCTGTTCGTAGGCCTAGCA 60.971 55.000 21.94 13.71 33.81 3.49
2388 2721 0.528684 CAGCTGTTCGTAGGCCTAGC 60.529 60.000 14.38 14.18 0.00 3.42
2389 2722 0.818296 ACAGCTGTTCGTAGGCCTAG 59.182 55.000 15.25 7.81 0.00 3.02
2390 2723 1.263356 AACAGCTGTTCGTAGGCCTA 58.737 50.000 26.36 8.91 31.64 3.93
2391 2724 1.067071 GTAACAGCTGTTCGTAGGCCT 60.067 52.381 34.29 11.78 39.31 5.19
2392 2725 1.356938 GTAACAGCTGTTCGTAGGCC 58.643 55.000 34.29 11.56 39.31 5.19
2393 2726 0.989890 CGTAACAGCTGTTCGTAGGC 59.010 55.000 34.29 16.89 39.31 3.93
2394 2727 2.342910 ACGTAACAGCTGTTCGTAGG 57.657 50.000 34.63 26.15 38.74 3.18
2395 2728 3.605486 GGTTACGTAACAGCTGTTCGTAG 59.395 47.826 35.05 27.17 40.84 3.51
2396 2729 3.253188 AGGTTACGTAACAGCTGTTCGTA 59.747 43.478 34.57 34.57 39.97 3.43
2397 2730 2.035066 AGGTTACGTAACAGCTGTTCGT 59.965 45.455 35.93 35.93 41.18 3.85
2398 2731 2.669364 AGGTTACGTAACAGCTGTTCG 58.331 47.619 34.29 32.55 39.31 3.95
2399 2732 3.605486 CGTAGGTTACGTAACAGCTGTTC 59.395 47.826 34.29 23.07 46.41 3.18
2400 2733 3.568538 CGTAGGTTACGTAACAGCTGTT 58.431 45.455 32.97 32.97 46.41 3.16
2401 2734 3.207474 CGTAGGTTACGTAACAGCTGT 57.793 47.619 32.93 15.25 46.41 4.40
2412 2745 6.531439 CACTTCAGCAAATTACGTAGGTTAC 58.469 40.000 0.00 0.00 0.00 2.50
2413 2746 5.121142 GCACTTCAGCAAATTACGTAGGTTA 59.879 40.000 0.00 0.00 0.00 2.85
2414 2747 4.083484 GCACTTCAGCAAATTACGTAGGTT 60.083 41.667 0.00 0.00 0.00 3.50
2415 2748 3.435671 GCACTTCAGCAAATTACGTAGGT 59.564 43.478 0.00 0.00 0.00 3.08
2416 2749 3.684788 AGCACTTCAGCAAATTACGTAGG 59.315 43.478 0.00 0.00 36.85 3.18
2417 2750 4.928661 AGCACTTCAGCAAATTACGTAG 57.071 40.909 0.00 0.00 36.85 3.51
2418 2751 6.592220 TGATTAGCACTTCAGCAAATTACGTA 59.408 34.615 0.00 0.00 36.85 3.57
2419 2752 5.411361 TGATTAGCACTTCAGCAAATTACGT 59.589 36.000 0.00 0.00 36.85 3.57
2420 2753 5.868257 TGATTAGCACTTCAGCAAATTACG 58.132 37.500 0.00 0.00 36.85 3.18
2421 2754 7.809806 AGTTTGATTAGCACTTCAGCAAATTAC 59.190 33.333 0.00 0.00 36.85 1.89
2422 2755 7.809331 CAGTTTGATTAGCACTTCAGCAAATTA 59.191 33.333 0.00 0.00 36.85 1.40
2423 2756 6.643770 CAGTTTGATTAGCACTTCAGCAAATT 59.356 34.615 0.00 0.00 36.85 1.82
2424 2757 6.154445 CAGTTTGATTAGCACTTCAGCAAAT 58.846 36.000 0.00 0.00 36.85 2.32
2425 2758 5.522456 CAGTTTGATTAGCACTTCAGCAAA 58.478 37.500 0.00 0.00 36.85 3.68
2426 2759 4.557296 GCAGTTTGATTAGCACTTCAGCAA 60.557 41.667 0.00 0.00 36.85 3.91
2427 2760 3.058016 GCAGTTTGATTAGCACTTCAGCA 60.058 43.478 0.00 0.00 36.85 4.41
2428 2761 3.496155 GCAGTTTGATTAGCACTTCAGC 58.504 45.455 0.00 0.00 0.00 4.26
2429 2762 3.119708 GGGCAGTTTGATTAGCACTTCAG 60.120 47.826 0.00 0.00 0.00 3.02
2430 2763 2.819608 GGGCAGTTTGATTAGCACTTCA 59.180 45.455 0.00 0.00 0.00 3.02
2431 2764 2.164422 GGGGCAGTTTGATTAGCACTTC 59.836 50.000 0.00 0.00 0.00 3.01
2432 2765 2.171003 GGGGCAGTTTGATTAGCACTT 58.829 47.619 0.00 0.00 0.00 3.16
2433 2766 1.616994 GGGGGCAGTTTGATTAGCACT 60.617 52.381 0.00 0.00 0.00 4.40
2434 2767 0.817654 GGGGGCAGTTTGATTAGCAC 59.182 55.000 0.00 0.00 0.00 4.40
2435 2768 3.281332 GGGGGCAGTTTGATTAGCA 57.719 52.632 0.00 0.00 0.00 3.49
2474 2807 3.655350 ATTAGTTGGGGGCACGGGC 62.655 63.158 0.00 0.00 40.13 6.13
2475 2808 1.752694 CATTAGTTGGGGGCACGGG 60.753 63.158 0.00 0.00 0.00 5.28
2476 2809 2.414785 GCATTAGTTGGGGGCACGG 61.415 63.158 0.00 0.00 0.00 4.94
2477 2810 2.414785 GGCATTAGTTGGGGGCACG 61.415 63.158 0.00 0.00 0.00 5.34
2478 2811 2.414785 CGGCATTAGTTGGGGGCAC 61.415 63.158 0.00 0.00 0.00 5.01
2479 2812 2.044451 CGGCATTAGTTGGGGGCA 60.044 61.111 0.00 0.00 0.00 5.36
2480 2813 0.755327 ATTCGGCATTAGTTGGGGGC 60.755 55.000 0.00 0.00 0.00 5.80
2481 2814 1.318576 GATTCGGCATTAGTTGGGGG 58.681 55.000 0.00 0.00 0.00 5.40
2482 2815 2.051334 TGATTCGGCATTAGTTGGGG 57.949 50.000 0.00 0.00 0.00 4.96
2483 2816 5.299279 AGTTATTGATTCGGCATTAGTTGGG 59.701 40.000 0.00 0.00 0.00 4.12
2484 2817 6.201517 CAGTTATTGATTCGGCATTAGTTGG 58.798 40.000 0.00 0.00 0.00 3.77
2485 2818 5.682862 GCAGTTATTGATTCGGCATTAGTTG 59.317 40.000 0.00 0.00 0.00 3.16
2486 2819 5.221048 GGCAGTTATTGATTCGGCATTAGTT 60.221 40.000 0.00 0.00 0.00 2.24
2487 2820 4.275936 GGCAGTTATTGATTCGGCATTAGT 59.724 41.667 0.00 0.00 0.00 2.24
2488 2821 4.320494 GGGCAGTTATTGATTCGGCATTAG 60.320 45.833 0.00 0.00 0.00 1.73
2489 2822 3.568007 GGGCAGTTATTGATTCGGCATTA 59.432 43.478 0.00 0.00 0.00 1.90
2490 2823 2.362077 GGGCAGTTATTGATTCGGCATT 59.638 45.455 0.00 0.00 0.00 3.56
2491 2824 1.956477 GGGCAGTTATTGATTCGGCAT 59.044 47.619 0.00 0.00 0.00 4.40
2492 2825 1.340502 TGGGCAGTTATTGATTCGGCA 60.341 47.619 0.00 0.00 0.00 5.69
2493 2826 1.065551 GTGGGCAGTTATTGATTCGGC 59.934 52.381 0.00 0.00 0.00 5.54
2494 2827 2.643551 AGTGGGCAGTTATTGATTCGG 58.356 47.619 0.00 0.00 0.00 4.30
2495 2828 3.181497 CCAAGTGGGCAGTTATTGATTCG 60.181 47.826 0.00 0.00 0.00 3.34
2496 2829 4.376340 CCAAGTGGGCAGTTATTGATTC 57.624 45.455 0.00 0.00 0.00 2.52
2509 2842 3.897239 TCCTACATAATTGCCAAGTGGG 58.103 45.455 0.00 0.00 40.85 4.61
2510 2843 5.179368 CGTATCCTACATAATTGCCAAGTGG 59.821 44.000 0.00 0.00 38.53 4.00
2511 2844 5.758296 ACGTATCCTACATAATTGCCAAGTG 59.242 40.000 0.00 0.00 0.00 3.16
2512 2845 5.925509 ACGTATCCTACATAATTGCCAAGT 58.074 37.500 0.00 0.00 0.00 3.16
2513 2846 7.956420 TTACGTATCCTACATAATTGCCAAG 57.044 36.000 0.00 0.00 0.00 3.61
2514 2847 8.911918 ATTTACGTATCCTACATAATTGCCAA 57.088 30.769 0.00 0.00 0.00 4.52
2515 2848 8.372459 AGATTTACGTATCCTACATAATTGCCA 58.628 33.333 0.00 0.00 0.00 4.92
2516 2849 8.773404 AGATTTACGTATCCTACATAATTGCC 57.227 34.615 0.00 0.00 0.00 4.52
2517 2850 8.870879 GGAGATTTACGTATCCTACATAATTGC 58.129 37.037 5.81 0.00 0.00 3.56
2518 2851 9.367444 GGGAGATTTACGTATCCTACATAATTG 57.633 37.037 11.68 0.00 32.18 2.32
2519 2852 9.322769 AGGGAGATTTACGTATCCTACATAATT 57.677 33.333 11.68 0.00 32.18 1.40
2520 2853 8.896722 AGGGAGATTTACGTATCCTACATAAT 57.103 34.615 11.68 0.00 32.18 1.28
2521 2854 9.236006 GTAGGGAGATTTACGTATCCTACATAA 57.764 37.037 19.27 3.81 42.65 1.90
2522 2855 7.550551 CGTAGGGAGATTTACGTATCCTACATA 59.449 40.741 21.45 11.20 43.03 2.29
2523 2856 6.373774 CGTAGGGAGATTTACGTATCCTACAT 59.626 42.308 21.45 11.86 43.03 2.29
2524 2857 5.702670 CGTAGGGAGATTTACGTATCCTACA 59.297 44.000 21.45 6.89 43.03 2.74
2525 2858 6.175712 CGTAGGGAGATTTACGTATCCTAC 57.824 45.833 11.68 14.74 40.84 3.18
2543 2876 1.651987 CAATGCTACACCCACGTAGG 58.348 55.000 0.00 0.00 39.45 3.18
2544 2877 1.006832 GCAATGCTACACCCACGTAG 58.993 55.000 0.00 0.00 41.56 3.51
2545 2878 0.611200 AGCAATGCTACACCCACGTA 59.389 50.000 5.69 0.00 36.99 3.57
2546 2879 0.955428 CAGCAATGCTACACCCACGT 60.955 55.000 7.70 0.00 36.40 4.49
2547 2880 0.955428 ACAGCAATGCTACACCCACG 60.955 55.000 7.70 0.00 36.40 4.94
2548 2881 2.107950 TACAGCAATGCTACACCCAC 57.892 50.000 7.70 0.00 36.40 4.61
2549 2882 2.505407 AGATACAGCAATGCTACACCCA 59.495 45.455 7.70 0.00 36.40 4.51
2550 2883 3.199880 AGATACAGCAATGCTACACCC 57.800 47.619 7.70 0.00 36.40 4.61
2551 2884 4.446371 AGAAGATACAGCAATGCTACACC 58.554 43.478 7.70 0.00 36.40 4.16
2552 2885 4.509600 GGAGAAGATACAGCAATGCTACAC 59.490 45.833 7.70 0.02 36.40 2.90
2553 2886 4.162131 TGGAGAAGATACAGCAATGCTACA 59.838 41.667 7.70 0.00 36.40 2.74
2554 2887 4.509600 GTGGAGAAGATACAGCAATGCTAC 59.490 45.833 7.70 0.03 36.40 3.58
2555 2888 4.406972 AGTGGAGAAGATACAGCAATGCTA 59.593 41.667 7.70 0.00 36.40 3.49
2556 2889 3.199508 AGTGGAGAAGATACAGCAATGCT 59.800 43.478 0.00 0.00 40.77 3.79
2557 2890 3.539604 AGTGGAGAAGATACAGCAATGC 58.460 45.455 0.00 0.00 0.00 3.56
2558 2891 7.798596 AAATAGTGGAGAAGATACAGCAATG 57.201 36.000 0.00 0.00 0.00 2.82
2559 2892 9.717942 GATAAATAGTGGAGAAGATACAGCAAT 57.282 33.333 0.00 0.00 0.00 3.56
2560 2893 8.150945 GGATAAATAGTGGAGAAGATACAGCAA 58.849 37.037 0.00 0.00 0.00 3.91
2561 2894 7.290014 TGGATAAATAGTGGAGAAGATACAGCA 59.710 37.037 0.00 0.00 0.00 4.41
2562 2895 7.671302 TGGATAAATAGTGGAGAAGATACAGC 58.329 38.462 0.00 0.00 0.00 4.40
2565 2898 9.660180 GGAATGGATAAATAGTGGAGAAGATAC 57.340 37.037 0.00 0.00 0.00 2.24
2566 2899 8.826765 GGGAATGGATAAATAGTGGAGAAGATA 58.173 37.037 0.00 0.00 0.00 1.98
2567 2900 7.257199 GGGGAATGGATAAATAGTGGAGAAGAT 60.257 40.741 0.00 0.00 0.00 2.40
2568 2901 6.044404 GGGGAATGGATAAATAGTGGAGAAGA 59.956 42.308 0.00 0.00 0.00 2.87
2569 2902 6.183361 TGGGGAATGGATAAATAGTGGAGAAG 60.183 42.308 0.00 0.00 0.00 2.85
2570 2903 5.674496 TGGGGAATGGATAAATAGTGGAGAA 59.326 40.000 0.00 0.00 0.00 2.87
2571 2904 5.073144 GTGGGGAATGGATAAATAGTGGAGA 59.927 44.000 0.00 0.00 0.00 3.71
2600 2933 2.958204 TATAGTACGGCGGCGCTCG 61.958 63.158 32.57 31.45 42.76 5.03
2601 2934 1.441682 GTATAGTACGGCGGCGCTC 60.442 63.158 32.57 23.25 0.00 5.03
2602 2935 2.641559 GTATAGTACGGCGGCGCT 59.358 61.111 32.57 22.91 0.00 5.92
2604 2937 2.256461 GGGTATAGTACGGCGGCG 59.744 66.667 31.06 31.06 0.00 6.46
2607 2940 0.538057 TGGAGGGGTATAGTACGGCG 60.538 60.000 4.80 4.80 0.00 6.46
2608 2941 1.934410 ATGGAGGGGTATAGTACGGC 58.066 55.000 0.00 0.00 0.00 5.68
2609 2942 5.126699 AGATATGGAGGGGTATAGTACGG 57.873 47.826 0.00 0.00 0.00 4.02
2610 2943 5.764192 GCTAGATATGGAGGGGTATAGTACG 59.236 48.000 0.00 0.00 0.00 3.67
2612 2945 6.637493 GCAGCTAGATATGGAGGGGTATAGTA 60.637 46.154 0.00 0.00 0.00 1.82
2613 2946 5.772004 CAGCTAGATATGGAGGGGTATAGT 58.228 45.833 0.00 0.00 0.00 2.12
2614 2947 4.586841 GCAGCTAGATATGGAGGGGTATAG 59.413 50.000 0.00 0.00 0.00 1.31
2615 2948 4.547671 GCAGCTAGATATGGAGGGGTATA 58.452 47.826 0.00 0.00 0.00 1.47
2616 2949 3.379452 GCAGCTAGATATGGAGGGGTAT 58.621 50.000 0.00 0.00 0.00 2.73
2617 2950 2.559931 GGCAGCTAGATATGGAGGGGTA 60.560 54.545 0.00 0.00 0.00 3.69
2618 2951 1.650528 GCAGCTAGATATGGAGGGGT 58.349 55.000 0.00 0.00 0.00 4.95
2619 2952 0.908198 GGCAGCTAGATATGGAGGGG 59.092 60.000 0.00 0.00 0.00 4.79
2620 2953 1.830477 GAGGCAGCTAGATATGGAGGG 59.170 57.143 0.00 0.00 0.00 4.30
2621 2954 2.818921 AGAGGCAGCTAGATATGGAGG 58.181 52.381 0.00 0.00 0.00 4.30
2623 2956 3.169099 GGAAGAGGCAGCTAGATATGGA 58.831 50.000 0.00 0.00 0.00 3.41
2624 2957 3.172339 AGGAAGAGGCAGCTAGATATGG 58.828 50.000 0.00 0.00 0.00 2.74
2625 2958 4.142491 CGTAGGAAGAGGCAGCTAGATATG 60.142 50.000 0.00 0.00 0.00 1.78
2626 2959 4.013728 CGTAGGAAGAGGCAGCTAGATAT 58.986 47.826 0.00 0.00 0.00 1.63
2627 2960 3.413327 CGTAGGAAGAGGCAGCTAGATA 58.587 50.000 0.00 0.00 0.00 1.98
2644 2987 4.453136 GCTAGTCATCTACTCTTCCCGTAG 59.547 50.000 0.00 0.00 39.80 3.51
2676 3019 2.024177 ACTCTCTAGGTAAGGGTGGACC 60.024 54.545 0.00 0.00 40.67 4.46
2689 3032 2.400399 CTCGCGGTCTCTACTCTCTAG 58.600 57.143 6.13 0.00 0.00 2.43
2690 3033 1.068895 CCTCGCGGTCTCTACTCTCTA 59.931 57.143 6.13 0.00 0.00 2.43
2691 3034 0.179067 CCTCGCGGTCTCTACTCTCT 60.179 60.000 6.13 0.00 0.00 3.10
2692 3035 0.179078 TCCTCGCGGTCTCTACTCTC 60.179 60.000 6.13 0.00 0.00 3.20
2693 3036 0.470766 ATCCTCGCGGTCTCTACTCT 59.529 55.000 6.13 0.00 0.00 3.24
2694 3037 0.589223 CATCCTCGCGGTCTCTACTC 59.411 60.000 6.13 0.00 0.00 2.59
2695 3038 0.107116 ACATCCTCGCGGTCTCTACT 60.107 55.000 6.13 0.00 0.00 2.57
2696 3039 1.590932 TACATCCTCGCGGTCTCTAC 58.409 55.000 6.13 0.00 0.00 2.59
2703 3046 1.491670 CAGACATTACATCCTCGCGG 58.508 55.000 6.13 0.00 0.00 6.46
2709 3052 1.945394 CAGCAGCCAGACATTACATCC 59.055 52.381 0.00 0.00 0.00 3.51
2717 3060 1.134128 TCAAGAAACAGCAGCCAGACA 60.134 47.619 0.00 0.00 0.00 3.41
2723 3066 1.246737 CCCCCTCAAGAAACAGCAGC 61.247 60.000 0.00 0.00 0.00 5.25
2726 3069 0.895559 CCACCCCCTCAAGAAACAGC 60.896 60.000 0.00 0.00 0.00 4.40
2727 3070 0.251341 CCCACCCCCTCAAGAAACAG 60.251 60.000 0.00 0.00 0.00 3.16
2795 3147 1.917872 CGAAGGGAGGGGAGATCTAG 58.082 60.000 0.00 0.00 0.00 2.43
2800 3152 0.264955 ATTAGCGAAGGGAGGGGAGA 59.735 55.000 0.00 0.00 0.00 3.71
2801 3153 2.011122 TATTAGCGAAGGGAGGGGAG 57.989 55.000 0.00 0.00 0.00 4.30
2802 3154 2.715763 ATATTAGCGAAGGGAGGGGA 57.284 50.000 0.00 0.00 0.00 4.81
2803 3155 4.344390 GGTATATATTAGCGAAGGGAGGGG 59.656 50.000 0.00 0.00 0.00 4.79
2804 3156 4.037684 CGGTATATATTAGCGAAGGGAGGG 59.962 50.000 9.46 0.00 40.41 4.30
2805 3157 4.885907 TCGGTATATATTAGCGAAGGGAGG 59.114 45.833 13.20 0.00 43.16 4.30
2812 3164 5.068198 GGTCCCATTCGGTATATATTAGCGA 59.932 44.000 12.17 12.17 44.19 4.93
2813 3165 5.287226 GGTCCCATTCGGTATATATTAGCG 58.713 45.833 0.00 9.01 39.47 4.26
2814 3166 5.454329 GGGGTCCCATTCGGTATATATTAGC 60.454 48.000 10.98 0.00 35.81 3.09
2815 3167 5.071384 GGGGGTCCCATTCGGTATATATTAG 59.929 48.000 10.98 0.00 44.65 1.73
2816 3168 4.970640 GGGGGTCCCATTCGGTATATATTA 59.029 45.833 10.98 0.00 44.65 0.98
2817 3169 3.784202 GGGGGTCCCATTCGGTATATATT 59.216 47.826 10.98 0.00 44.65 1.28
2818 3170 3.390819 GGGGGTCCCATTCGGTATATAT 58.609 50.000 10.98 0.00 44.65 0.86
2819 3171 2.836667 GGGGGTCCCATTCGGTATATA 58.163 52.381 10.98 0.00 44.65 0.86
2820 3172 1.665137 GGGGGTCCCATTCGGTATAT 58.335 55.000 10.98 0.00 44.65 0.86
2821 3173 3.168928 GGGGGTCCCATTCGGTATA 57.831 57.895 10.98 0.00 44.65 1.47
2822 3174 3.997196 GGGGGTCCCATTCGGTAT 58.003 61.111 10.98 0.00 44.65 2.73
2839 3191 1.840635 CTTGTTTCTCTAGGGAGGGGG 59.159 57.143 0.00 0.00 39.86 5.40
2840 3192 2.552367 ACTTGTTTCTCTAGGGAGGGG 58.448 52.381 0.00 0.00 39.86 4.79
2841 3193 3.841255 AGAACTTGTTTCTCTAGGGAGGG 59.159 47.826 0.00 0.00 40.98 4.30
2852 3204 4.548346 CGAGTTGACACGAGAACTTGTTTC 60.548 45.833 0.00 0.00 32.47 2.78
2853 3205 3.306166 CGAGTTGACACGAGAACTTGTTT 59.694 43.478 0.00 0.00 32.47 2.83
2854 3206 2.858344 CGAGTTGACACGAGAACTTGTT 59.142 45.455 0.00 0.00 32.47 2.83
2855 3207 2.460918 CGAGTTGACACGAGAACTTGT 58.539 47.619 0.00 0.00 32.47 3.16
2856 3208 1.787155 CCGAGTTGACACGAGAACTTG 59.213 52.381 2.57 0.00 32.47 3.16
2857 3209 1.269621 CCCGAGTTGACACGAGAACTT 60.270 52.381 2.57 0.00 32.47 2.66
2858 3210 0.314302 CCCGAGTTGACACGAGAACT 59.686 55.000 2.57 0.00 35.07 3.01
2859 3211 1.282930 GCCCGAGTTGACACGAGAAC 61.283 60.000 2.57 0.00 31.68 3.01
2860 3212 1.006571 GCCCGAGTTGACACGAGAA 60.007 57.895 2.57 0.00 31.68 2.87
2861 3213 2.197605 TGCCCGAGTTGACACGAGA 61.198 57.895 2.57 0.00 31.68 4.04
2862 3214 2.022129 GTGCCCGAGTTGACACGAG 61.022 63.158 2.57 0.00 31.68 4.18
2863 3215 2.028484 GTGCCCGAGTTGACACGA 59.972 61.111 2.57 0.00 31.68 4.35
2864 3216 3.041940 GGTGCCCGAGTTGACACG 61.042 66.667 0.00 0.00 33.81 4.49
2865 3217 2.668550 GGGTGCCCGAGTTGACAC 60.669 66.667 0.00 0.00 0.00 3.67
2866 3218 3.948719 GGGGTGCCCGAGTTGACA 61.949 66.667 0.54 0.00 36.85 3.58
2867 3219 4.717313 GGGGGTGCCCGAGTTGAC 62.717 72.222 0.54 0.00 46.66 3.18
2868 3220 4.974438 AGGGGGTGCCCGAGTTGA 62.974 66.667 0.54 0.00 46.66 3.18
2869 3221 3.507377 AAAGGGGGTGCCCGAGTTG 62.507 63.158 0.54 0.00 46.66 3.16
2870 3222 3.182996 AAAGGGGGTGCCCGAGTT 61.183 61.111 0.54 0.00 46.66 3.01
2871 3223 3.647771 GAAAGGGGGTGCCCGAGT 61.648 66.667 0.54 0.00 46.66 4.18
2872 3224 3.330720 AGAAAGGGGGTGCCCGAG 61.331 66.667 0.54 0.00 46.66 4.63
2873 3225 3.646715 CAGAAAGGGGGTGCCCGA 61.647 66.667 0.54 0.00 46.66 5.14
2874 3226 2.536997 CTACAGAAAGGGGGTGCCCG 62.537 65.000 0.54 0.00 46.66 6.13
2875 3227 1.303282 CTACAGAAAGGGGGTGCCC 59.697 63.158 0.00 0.00 44.51 5.36
2876 3228 0.404426 AACTACAGAAAGGGGGTGCC 59.596 55.000 0.00 0.00 0.00 5.01
2877 3229 1.351350 AGAACTACAGAAAGGGGGTGC 59.649 52.381 0.00 0.00 0.00 5.01
2878 3230 2.027100 GGAGAACTACAGAAAGGGGGTG 60.027 54.545 0.00 0.00 0.00 4.61
2879 3231 2.267192 GGAGAACTACAGAAAGGGGGT 58.733 52.381 0.00 0.00 0.00 4.95
2880 3232 2.237392 CTGGAGAACTACAGAAAGGGGG 59.763 54.545 8.22 0.00 44.32 5.40
2881 3233 3.173965 TCTGGAGAACTACAGAAAGGGG 58.826 50.000 13.57 0.00 46.88 4.79
2894 3246 5.034852 TGTCTCACAATTGTTCTGGAGAA 57.965 39.130 21.43 12.70 33.64 2.87
2895 3247 4.687901 TGTCTCACAATTGTTCTGGAGA 57.312 40.909 17.78 17.78 0.00 3.71
2896 3248 4.092529 CGATGTCTCACAATTGTTCTGGAG 59.907 45.833 8.77 12.36 0.00 3.86
2897 3249 3.996363 CGATGTCTCACAATTGTTCTGGA 59.004 43.478 8.77 2.12 0.00 3.86
2898 3250 3.425359 GCGATGTCTCACAATTGTTCTGG 60.425 47.826 8.77 0.00 0.00 3.86
2899 3251 3.722957 CGCGATGTCTCACAATTGTTCTG 60.723 47.826 8.77 2.19 0.00 3.02
2900 3252 2.413112 CGCGATGTCTCACAATTGTTCT 59.587 45.455 8.77 0.00 0.00 3.01
2901 3253 2.411748 TCGCGATGTCTCACAATTGTTC 59.588 45.455 8.77 1.84 0.00 3.18
2902 3254 2.412870 TCGCGATGTCTCACAATTGTT 58.587 42.857 8.77 0.00 0.00 2.83
2903 3255 1.995484 CTCGCGATGTCTCACAATTGT 59.005 47.619 10.36 4.92 0.00 2.71
2904 3256 1.325640 CCTCGCGATGTCTCACAATTG 59.674 52.381 10.36 3.24 0.00 2.32
2905 3257 1.066858 ACCTCGCGATGTCTCACAATT 60.067 47.619 10.36 0.00 0.00 2.32
2906 3258 0.532573 ACCTCGCGATGTCTCACAAT 59.467 50.000 10.36 0.00 0.00 2.71
2907 3259 0.317160 AACCTCGCGATGTCTCACAA 59.683 50.000 17.43 0.00 0.00 3.33
2908 3260 0.388520 CAACCTCGCGATGTCTCACA 60.389 55.000 17.43 0.00 0.00 3.58
2909 3261 1.687494 GCAACCTCGCGATGTCTCAC 61.687 60.000 17.43 4.22 0.00 3.51
2910 3262 1.446099 GCAACCTCGCGATGTCTCA 60.446 57.895 17.43 0.00 0.00 3.27
2911 3263 1.142778 GAGCAACCTCGCGATGTCTC 61.143 60.000 17.43 15.62 36.85 3.36
2912 3264 1.153745 GAGCAACCTCGCGATGTCT 60.154 57.895 17.43 11.08 36.85 3.41
2913 3265 2.167861 GGAGCAACCTCGCGATGTC 61.168 63.158 17.43 6.33 39.06 3.06
2914 3266 2.125512 GGAGCAACCTCGCGATGT 60.126 61.111 10.36 11.00 39.06 3.06
2915 3267 3.257561 CGGAGCAACCTCGCGATG 61.258 66.667 10.36 10.15 39.06 3.84
2928 3280 1.137282 GAAAACTAGAGGAGGGCGGAG 59.863 57.143 0.00 0.00 0.00 4.63
2929 3281 1.192428 GAAAACTAGAGGAGGGCGGA 58.808 55.000 0.00 0.00 0.00 5.54
2930 3282 0.178301 GGAAAACTAGAGGAGGGCGG 59.822 60.000 0.00 0.00 0.00 6.13
2931 3283 0.179108 CGGAAAACTAGAGGAGGGCG 60.179 60.000 0.00 0.00 0.00 6.13
2932 3284 0.178301 CCGGAAAACTAGAGGAGGGC 59.822 60.000 0.00 0.00 0.00 5.19
2933 3285 0.178301 GCCGGAAAACTAGAGGAGGG 59.822 60.000 5.05 0.00 0.00 4.30
2934 3286 0.179108 CGCCGGAAAACTAGAGGAGG 60.179 60.000 5.05 0.00 0.00 4.30
2935 3287 0.815734 TCGCCGGAAAACTAGAGGAG 59.184 55.000 5.05 0.00 0.00 3.69
2936 3288 0.529378 GTCGCCGGAAAACTAGAGGA 59.471 55.000 5.05 0.00 0.00 3.71
2937 3289 0.801067 CGTCGCCGGAAAACTAGAGG 60.801 60.000 5.05 0.00 0.00 3.69
2938 3290 1.411493 GCGTCGCCGGAAAACTAGAG 61.411 60.000 5.05 0.00 33.68 2.43
2939 3291 1.444895 GCGTCGCCGGAAAACTAGA 60.445 57.895 5.05 0.00 33.68 2.43
2940 3292 1.012486 AAGCGTCGCCGGAAAACTAG 61.012 55.000 14.86 0.00 33.68 2.57
2941 3293 0.243365 TAAGCGTCGCCGGAAAACTA 59.757 50.000 14.86 0.00 33.68 2.24
2942 3294 1.005867 TAAGCGTCGCCGGAAAACT 60.006 52.632 14.86 0.00 33.68 2.66
2943 3295 1.418755 CTAAGCGTCGCCGGAAAAC 59.581 57.895 14.86 0.00 33.68 2.43
2944 3296 2.385091 GCTAAGCGTCGCCGGAAAA 61.385 57.895 14.86 0.00 33.68 2.29
2945 3297 2.812178 GCTAAGCGTCGCCGGAAA 60.812 61.111 14.86 0.00 33.68 3.13
2946 3298 3.695022 GAGCTAAGCGTCGCCGGAA 62.695 63.158 14.86 0.00 33.68 4.30
2947 3299 4.189188 GAGCTAAGCGTCGCCGGA 62.189 66.667 14.86 0.00 33.68 5.14
2948 3300 2.718993 CTAGAGCTAAGCGTCGCCGG 62.719 65.000 14.86 0.00 33.68 6.13
2949 3301 1.369448 CTAGAGCTAAGCGTCGCCG 60.369 63.158 14.86 3.91 37.07 6.46
2950 3302 0.594110 ATCTAGAGCTAAGCGTCGCC 59.406 55.000 14.86 0.00 0.00 5.54
2951 3303 1.664588 CCATCTAGAGCTAAGCGTCGC 60.665 57.143 9.80 9.80 0.00 5.19
2952 3304 1.604755 ACCATCTAGAGCTAAGCGTCG 59.395 52.381 0.00 0.00 0.00 5.12
2953 3305 2.619177 TCACCATCTAGAGCTAAGCGTC 59.381 50.000 0.00 0.00 0.00 5.19
2954 3306 2.656002 TCACCATCTAGAGCTAAGCGT 58.344 47.619 0.00 0.00 0.00 5.07
2955 3307 3.376540 GTTCACCATCTAGAGCTAAGCG 58.623 50.000 0.00 0.00 0.00 4.68
2956 3308 3.723260 GGTTCACCATCTAGAGCTAAGC 58.277 50.000 0.00 0.00 35.64 3.09
2957 3309 3.797184 GCGGTTCACCATCTAGAGCTAAG 60.797 52.174 0.00 0.00 35.14 2.18
2958 3310 2.100916 GCGGTTCACCATCTAGAGCTAA 59.899 50.000 0.00 0.00 35.14 3.09
2959 3311 1.681793 GCGGTTCACCATCTAGAGCTA 59.318 52.381 0.00 0.00 35.14 3.32
2960 3312 0.461961 GCGGTTCACCATCTAGAGCT 59.538 55.000 0.00 0.00 35.14 4.09
2961 3313 0.175760 TGCGGTTCACCATCTAGAGC 59.824 55.000 0.00 0.00 35.14 4.09
2962 3314 1.804372 GCTGCGGTTCACCATCTAGAG 60.804 57.143 0.00 0.00 35.14 2.43
2963 3315 0.175760 GCTGCGGTTCACCATCTAGA 59.824 55.000 0.00 0.00 35.14 2.43
2964 3316 0.811616 GGCTGCGGTTCACCATCTAG 60.812 60.000 0.00 0.00 35.14 2.43
2965 3317 1.220749 GGCTGCGGTTCACCATCTA 59.779 57.895 0.00 0.00 35.14 1.98
2966 3318 2.045926 GGCTGCGGTTCACCATCT 60.046 61.111 0.00 0.00 35.14 2.90
2967 3319 0.463654 TATGGCTGCGGTTCACCATC 60.464 55.000 5.75 0.00 41.93 3.51
2968 3320 0.183492 ATATGGCTGCGGTTCACCAT 59.817 50.000 7.46 7.46 44.88 3.55
2969 3321 0.463654 GATATGGCTGCGGTTCACCA 60.464 55.000 0.00 0.00 36.43 4.17
2970 3322 1.498865 CGATATGGCTGCGGTTCACC 61.499 60.000 0.00 0.00 0.00 4.02
2971 3323 0.810031 ACGATATGGCTGCGGTTCAC 60.810 55.000 0.00 0.00 0.00 3.18
2972 3324 0.529773 GACGATATGGCTGCGGTTCA 60.530 55.000 0.00 0.00 0.00 3.18
2973 3325 1.548973 CGACGATATGGCTGCGGTTC 61.549 60.000 0.00 0.00 0.00 3.62
2974 3326 1.591594 CGACGATATGGCTGCGGTT 60.592 57.895 0.00 0.00 0.00 4.44
2975 3327 1.806461 ATCGACGATATGGCTGCGGT 61.806 55.000 8.99 0.00 0.00 5.68
2976 3328 1.073216 GATCGACGATATGGCTGCGG 61.073 60.000 10.97 0.00 0.00 5.69
2977 3329 0.109551 AGATCGACGATATGGCTGCG 60.110 55.000 10.97 0.00 0.00 5.18
2978 3330 1.068264 TGAGATCGACGATATGGCTGC 60.068 52.381 10.14 0.00 0.00 5.25
2979 3331 2.997485 TGAGATCGACGATATGGCTG 57.003 50.000 10.14 0.00 0.00 4.85
2980 3332 4.037327 CCATATGAGATCGACGATATGGCT 59.963 45.833 18.76 9.43 38.38 4.75
2981 3333 4.294232 CCATATGAGATCGACGATATGGC 58.706 47.826 18.76 5.18 38.38 4.40
2982 3334 4.339530 ACCCATATGAGATCGACGATATGG 59.660 45.833 21.85 21.85 41.18 2.74
2983 3335 5.277047 CACCCATATGAGATCGACGATATG 58.723 45.833 10.14 9.80 0.00 1.78
2984 3336 4.202060 GCACCCATATGAGATCGACGATAT 60.202 45.833 10.97 7.67 0.00 1.63
2985 3337 3.128764 GCACCCATATGAGATCGACGATA 59.871 47.826 10.97 0.00 0.00 2.92
2986 3338 2.094494 GCACCCATATGAGATCGACGAT 60.094 50.000 10.78 10.78 0.00 3.73
2987 3339 1.269723 GCACCCATATGAGATCGACGA 59.730 52.381 3.65 0.00 0.00 4.20
2988 3340 1.000274 TGCACCCATATGAGATCGACG 60.000 52.381 3.65 0.00 0.00 5.12
2989 3341 2.820059 TGCACCCATATGAGATCGAC 57.180 50.000 3.65 0.00 0.00 4.20
2990 3342 3.580022 AGATTGCACCCATATGAGATCGA 59.420 43.478 3.65 0.00 0.00 3.59
2991 3343 3.683340 CAGATTGCACCCATATGAGATCG 59.317 47.826 3.65 0.00 0.00 3.69
2992 3344 4.649692 ACAGATTGCACCCATATGAGATC 58.350 43.478 3.65 0.00 0.00 2.75
2993 3345 4.719026 ACAGATTGCACCCATATGAGAT 57.281 40.909 3.65 0.00 0.00 2.75
2994 3346 4.901250 TCTACAGATTGCACCCATATGAGA 59.099 41.667 3.65 0.00 0.00 3.27
2995 3347 5.219343 TCTACAGATTGCACCCATATGAG 57.781 43.478 3.65 0.00 0.00 2.90
2996 3348 5.830799 ATCTACAGATTGCACCCATATGA 57.169 39.130 3.65 0.00 0.00 2.15
2997 3349 6.815641 GTCTATCTACAGATTGCACCCATATG 59.184 42.308 0.00 0.00 36.05 1.78
2998 3350 6.070538 GGTCTATCTACAGATTGCACCCATAT 60.071 42.308 0.00 0.00 36.05 1.78
2999 3351 5.246203 GGTCTATCTACAGATTGCACCCATA 59.754 44.000 0.00 0.00 36.05 2.74
3000 3352 4.040952 GGTCTATCTACAGATTGCACCCAT 59.959 45.833 0.00 0.00 36.05 4.00
3001 3353 3.388024 GGTCTATCTACAGATTGCACCCA 59.612 47.826 0.00 0.00 36.05 4.51
3002 3354 3.388024 TGGTCTATCTACAGATTGCACCC 59.612 47.826 0.00 0.00 36.05 4.61
3003 3355 4.672587 TGGTCTATCTACAGATTGCACC 57.327 45.455 0.00 6.29 36.05 5.01
3004 3356 4.450419 GCATGGTCTATCTACAGATTGCAC 59.550 45.833 0.00 0.00 36.05 4.57
3005 3357 4.346127 AGCATGGTCTATCTACAGATTGCA 59.654 41.667 11.75 0.00 36.05 4.08
3006 3358 4.892433 AGCATGGTCTATCTACAGATTGC 58.108 43.478 0.00 0.64 36.05 3.56
3007 3359 7.496920 TCAAAAGCATGGTCTATCTACAGATTG 59.503 37.037 0.00 0.00 36.05 2.67
3008 3360 7.497249 GTCAAAAGCATGGTCTATCTACAGATT 59.503 37.037 0.00 0.00 36.05 2.40
3009 3361 6.989169 GTCAAAAGCATGGTCTATCTACAGAT 59.011 38.462 0.00 0.00 38.51 2.90
3010 3362 6.341316 GTCAAAAGCATGGTCTATCTACAGA 58.659 40.000 0.00 0.00 0.00 3.41
3011 3363 5.525378 GGTCAAAAGCATGGTCTATCTACAG 59.475 44.000 0.00 0.00 0.00 2.74
3012 3364 5.189736 AGGTCAAAAGCATGGTCTATCTACA 59.810 40.000 0.00 0.00 0.00 2.74
3013 3365 5.675538 AGGTCAAAAGCATGGTCTATCTAC 58.324 41.667 0.00 0.00 0.00 2.59
3014 3366 5.957771 AGGTCAAAAGCATGGTCTATCTA 57.042 39.130 0.00 0.00 0.00 1.98
3015 3367 4.851639 AGGTCAAAAGCATGGTCTATCT 57.148 40.909 0.00 0.00 0.00 1.98
3016 3368 5.183904 ACAAAGGTCAAAAGCATGGTCTATC 59.816 40.000 0.00 0.00 0.00 2.08
3017 3369 5.079643 ACAAAGGTCAAAAGCATGGTCTAT 58.920 37.500 0.00 0.00 0.00 1.98
3018 3370 4.469657 ACAAAGGTCAAAAGCATGGTCTA 58.530 39.130 0.00 0.00 0.00 2.59
3019 3371 3.299503 ACAAAGGTCAAAAGCATGGTCT 58.700 40.909 0.00 0.00 0.00 3.85
3020 3372 3.733443 ACAAAGGTCAAAAGCATGGTC 57.267 42.857 0.00 0.00 0.00 4.02
3021 3373 4.486125 AAACAAAGGTCAAAAGCATGGT 57.514 36.364 0.00 0.00 0.00 3.55
3022 3374 4.990426 CCTAAACAAAGGTCAAAAGCATGG 59.010 41.667 0.00 0.00 31.46 3.66
3023 3375 4.990426 CCCTAAACAAAGGTCAAAAGCATG 59.010 41.667 0.00 0.00 34.56 4.06
3024 3376 4.898861 TCCCTAAACAAAGGTCAAAAGCAT 59.101 37.500 0.00 0.00 34.56 3.79
3025 3377 4.098807 GTCCCTAAACAAAGGTCAAAAGCA 59.901 41.667 0.00 0.00 34.56 3.91
3026 3378 4.500887 GGTCCCTAAACAAAGGTCAAAAGC 60.501 45.833 0.00 0.00 34.56 3.51
3027 3379 4.261447 CGGTCCCTAAACAAAGGTCAAAAG 60.261 45.833 0.00 0.00 34.56 2.27
3028 3380 3.633065 CGGTCCCTAAACAAAGGTCAAAA 59.367 43.478 0.00 0.00 34.56 2.44
3029 3381 3.215975 CGGTCCCTAAACAAAGGTCAAA 58.784 45.455 0.00 0.00 34.56 2.69
3030 3382 2.173143 ACGGTCCCTAAACAAAGGTCAA 59.827 45.455 0.00 0.00 34.56 3.18
3031 3383 1.770061 ACGGTCCCTAAACAAAGGTCA 59.230 47.619 0.00 0.00 34.56 4.02
3032 3384 2.556144 ACGGTCCCTAAACAAAGGTC 57.444 50.000 0.00 0.00 34.56 3.85
3033 3385 2.807837 CGAACGGTCCCTAAACAAAGGT 60.808 50.000 0.00 0.00 34.56 3.50
3034 3386 1.802365 CGAACGGTCCCTAAACAAAGG 59.198 52.381 0.00 0.00 36.30 3.11
3035 3387 2.222445 CACGAACGGTCCCTAAACAAAG 59.778 50.000 0.00 0.00 0.00 2.77
3036 3388 2.211806 CACGAACGGTCCCTAAACAAA 58.788 47.619 0.00 0.00 0.00 2.83
3037 3389 1.138661 ACACGAACGGTCCCTAAACAA 59.861 47.619 0.00 0.00 0.00 2.83
3038 3390 0.752054 ACACGAACGGTCCCTAAACA 59.248 50.000 0.00 0.00 0.00 2.83
3039 3391 1.142474 CACACGAACGGTCCCTAAAC 58.858 55.000 0.00 0.00 0.00 2.01
3040 3392 1.039068 TCACACGAACGGTCCCTAAA 58.961 50.000 0.00 0.00 0.00 1.85
3041 3393 0.314935 GTCACACGAACGGTCCCTAA 59.685 55.000 0.00 0.00 0.00 2.69
3042 3394 1.855213 CGTCACACGAACGGTCCCTA 61.855 60.000 0.00 0.00 46.05 3.53
3043 3395 2.732658 GTCACACGAACGGTCCCT 59.267 61.111 0.00 0.00 0.00 4.20
3044 3396 2.732094 CGTCACACGAACGGTCCC 60.732 66.667 0.00 0.00 46.05 4.46
3049 3401 1.594269 CTCGAACCGTCACACGAACG 61.594 60.000 0.00 0.00 46.05 3.95
3050 3402 1.273455 CCTCGAACCGTCACACGAAC 61.273 60.000 0.00 0.00 46.05 3.95
3051 3403 1.008194 CCTCGAACCGTCACACGAA 60.008 57.895 0.00 0.00 46.05 3.85
3052 3404 2.640989 CCTCGAACCGTCACACGA 59.359 61.111 0.00 0.00 46.05 4.35
3053 3405 2.430244 CCCTCGAACCGTCACACG 60.430 66.667 0.00 0.00 42.11 4.49
3054 3406 2.710724 AAGCCCTCGAACCGTCACAC 62.711 60.000 0.00 0.00 0.00 3.82
3055 3407 2.430382 GAAGCCCTCGAACCGTCACA 62.430 60.000 0.00 0.00 0.00 3.58
3056 3408 1.737008 GAAGCCCTCGAACCGTCAC 60.737 63.158 0.00 0.00 0.00 3.67
3057 3409 1.750341 TTGAAGCCCTCGAACCGTCA 61.750 55.000 0.00 0.00 0.00 4.35
3058 3410 1.005394 TTGAAGCCCTCGAACCGTC 60.005 57.895 0.00 0.00 0.00 4.79
3059 3411 1.004918 CTTGAAGCCCTCGAACCGT 60.005 57.895 0.00 0.00 0.00 4.83
3060 3412 0.320421 TTCTTGAAGCCCTCGAACCG 60.320 55.000 0.00 0.00 0.00 4.44
3061 3413 1.157585 GTTCTTGAAGCCCTCGAACC 58.842 55.000 0.00 0.00 0.00 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.