Multiple sequence alignment - TraesCS7B01G099000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G099000 chr7B 100.000 3674 0 0 1 3674 113513378 113509705 0.000000e+00 6785.0
1 TraesCS7B01G099000 chr7B 93.111 1408 76 11 900 2292 113563268 113561867 0.000000e+00 2043.0
2 TraesCS7B01G099000 chr7B 93.548 744 25 4 5 746 113563983 113563261 0.000000e+00 1086.0
3 TraesCS7B01G099000 chr7B 84.067 772 64 25 2507 3256 113561788 113561054 0.000000e+00 689.0
4 TraesCS7B01G099000 chr7D 90.937 2306 129 23 895 3146 151657197 151654918 0.000000e+00 3027.0
5 TraesCS7B01G099000 chr7D 89.046 776 42 9 1 746 151657947 151657185 0.000000e+00 922.0
6 TraesCS7B01G099000 chr7D 92.857 154 10 1 746 899 165653285 165653133 4.780000e-54 222.0
7 TraesCS7B01G099000 chr7D 85.437 103 12 2 3150 3251 1042154 1042054 1.800000e-18 104.0
8 TraesCS7B01G099000 chr7A 90.114 1224 99 19 895 2109 151377455 151376245 0.000000e+00 1570.0
9 TraesCS7B01G099000 chr7A 87.726 1328 108 30 1554 2864 151376247 151374958 0.000000e+00 1498.0
10 TraesCS7B01G099000 chr7A 90.275 473 30 6 288 746 151377913 151377443 4.060000e-169 604.0
11 TraesCS7B01G099000 chr7A 94.156 154 8 1 746 899 167257798 167257646 2.210000e-57 233.0
12 TraesCS7B01G099000 chr7A 87.013 154 18 2 746 897 585069753 585069600 4.880000e-39 172.0
13 TraesCS7B01G099000 chr2D 86.143 433 44 7 3258 3674 430470410 430469978 1.560000e-123 453.0
14 TraesCS7B01G099000 chr2D 82.620 397 50 6 3291 3671 646607239 646606846 2.110000e-87 333.0
15 TraesCS7B01G099000 chr2D 90.345 145 13 1 754 898 543813872 543814015 4.840000e-44 189.0
16 TraesCS7B01G099000 chr1D 84.055 439 50 7 3249 3671 340670069 340669635 4.420000e-109 405.0
17 TraesCS7B01G099000 chr1D 82.927 328 49 6 3336 3657 1816944 1816618 4.640000e-74 289.0
18 TraesCS7B01G099000 chr1D 83.766 308 35 4 3379 3671 378733276 378733583 1.000000e-70 278.0
19 TraesCS7B01G099000 chr4D 84.184 392 45 9 3298 3672 479683280 479683671 7.500000e-97 364.0
20 TraesCS7B01G099000 chr4D 86.458 96 10 2 3157 3251 145632012 145631919 6.490000e-18 102.0
21 TraesCS7B01G099000 chr4D 84.694 98 12 3 3157 3253 439827329 439827424 1.090000e-15 95.3
22 TraesCS7B01G099000 chr3A 82.701 422 49 19 3269 3671 709061111 709060695 1.620000e-93 353.0
23 TraesCS7B01G099000 chr3A 83.740 123 11 6 3137 3253 541104100 541104219 1.400000e-19 108.0
24 TraesCS7B01G099000 chr6B 82.282 412 59 8 3249 3657 225166 224766 9.770000e-91 344.0
25 TraesCS7B01G099000 chr6B 82.883 111 15 3 3145 3253 632502624 632502516 3.020000e-16 97.1
26 TraesCS7B01G099000 chr6D 81.535 417 58 9 3249 3657 2434069 2433664 3.540000e-85 326.0
27 TraesCS7B01G099000 chr5D 81.698 377 56 9 3303 3667 39038348 39038723 5.960000e-78 302.0
28 TraesCS7B01G099000 chr5D 89.855 138 14 0 3297 3434 222741179 222741316 1.050000e-40 178.0
29 TraesCS7B01G099000 chr1B 83.582 335 37 11 3357 3674 496072340 496072007 7.710000e-77 298.0
30 TraesCS7B01G099000 chr1B 90.260 154 14 1 746 899 644295454 644295302 2.240000e-47 200.0
31 TraesCS7B01G099000 chr1B 87.013 154 20 0 745 898 416081457 416081610 1.360000e-39 174.0
32 TraesCS7B01G099000 chr1B 87.912 91 9 1 3145 3233 643111541 643111631 5.020000e-19 106.0
33 TraesCS7B01G099000 chr3B 98.710 155 2 0 745 899 489566471 489566317 3.610000e-70 276.0
34 TraesCS7B01G099000 chr3D 77.714 350 73 4 3302 3647 122693878 122694226 3.720000e-50 209.0
35 TraesCS7B01G099000 chr3D 89.610 154 16 0 746 899 5860644 5860797 2.890000e-46 196.0
36 TraesCS7B01G099000 chr3D 83.495 103 13 3 3145 3245 536231406 536231506 3.910000e-15 93.5
37 TraesCS7B01G099000 chr5A 89.610 154 16 0 746 899 304448692 304448845 2.890000e-46 196.0
38 TraesCS7B01G099000 chrUn 86.869 99 8 4 3157 3253 22887237 22887142 5.020000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G099000 chr7B 113509705 113513378 3673 True 6785.000000 6785 100.000000 1 3674 1 chr7B.!!$R1 3673
1 TraesCS7B01G099000 chr7B 113561054 113563983 2929 True 1272.666667 2043 90.242000 5 3256 3 chr7B.!!$R2 3251
2 TraesCS7B01G099000 chr7D 151654918 151657947 3029 True 1974.500000 3027 89.991500 1 3146 2 chr7D.!!$R3 3145
3 TraesCS7B01G099000 chr7A 151374958 151377913 2955 True 1224.000000 1570 89.371667 288 2864 3 chr7A.!!$R3 2576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
652 689 0.106918 TTCCCGTTGTGCTCTTGGTT 60.107 50.0 0.0 0.0 0.0 3.67 F
766 821 0.179108 GGGACGTAGCTGCCTTGTAG 60.179 60.0 0.0 0.0 0.0 2.74 F
858 913 0.257039 ATGAAGATGACCCCACTGCC 59.743 55.0 0.0 0.0 0.0 4.85 F
2468 3099 0.532196 ACTTATAAAGCGGGGCGAGC 60.532 55.0 0.0 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2566 3215 0.032540 GGCCTCAACTTTTGGTGCTG 59.967 55.0 0.00 0.0 36.98 4.41 R
2635 3291 0.327924 TCCATCCTGCGGTTGACATT 59.672 50.0 7.08 0.0 0.00 2.71 R
2637 3293 0.392863 CATCCATCCTGCGGTTGACA 60.393 55.0 7.08 0.0 0.00 3.58 R
3649 4344 0.030369 AAGTCGTCGACACAGACCAC 59.970 55.0 26.17 0.0 37.85 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
179 191 3.838120 TGACTCGTGATGATCAGTCAAC 58.162 45.455 11.98 1.40 38.01 3.18
242 256 2.081462 ACAAACGATCGGGATTTCCAC 58.919 47.619 20.98 0.00 37.91 4.02
264 278 4.970392 CGTGTACGTGTGGCCTAA 57.030 55.556 3.32 0.00 34.11 2.69
283 297 0.179018 ATCTAGGATTTGGTGGCCGC 60.179 55.000 8.12 8.12 0.00 6.53
311 325 4.819105 TTCGTATTGGACATTGGAGTCT 57.181 40.909 0.00 0.00 38.57 3.24
379 400 1.538512 CATATTTGCCAGCCCGATCAG 59.461 52.381 0.00 0.00 0.00 2.90
380 401 0.179020 TATTTGCCAGCCCGATCAGG 60.179 55.000 0.00 0.00 40.63 3.86
541 577 2.154798 TTGAGAAGACGTCCTGGCGG 62.155 60.000 13.01 0.00 35.98 6.13
543 579 4.373116 GAAGACGTCCTGGCGGCA 62.373 66.667 13.01 12.58 43.41 5.69
652 689 0.106918 TTCCCGTTGTGCTCTTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
740 795 1.524165 CTCCAGCTCTGCATCTGCC 60.524 63.158 0.00 0.00 41.18 4.85
741 796 2.895865 CCAGCTCTGCATCTGCCG 60.896 66.667 0.00 0.00 41.18 5.69
742 797 2.125229 CAGCTCTGCATCTGCCGT 60.125 61.111 0.00 0.00 41.18 5.68
743 798 1.142531 CAGCTCTGCATCTGCCGTA 59.857 57.895 0.00 0.00 41.18 4.02
744 799 0.875040 CAGCTCTGCATCTGCCGTAG 60.875 60.000 0.00 0.00 41.18 3.51
745 800 2.243264 GCTCTGCATCTGCCGTAGC 61.243 63.158 0.00 2.64 41.18 3.58
754 809 2.361483 TGCCGTAGCAGGGACGTA 60.361 61.111 0.00 0.00 46.52 3.57
755 810 2.412112 GCCGTAGCAGGGACGTAG 59.588 66.667 0.00 0.00 38.65 3.51
756 811 2.412112 CCGTAGCAGGGACGTAGC 59.588 66.667 0.00 0.00 38.65 3.58
757 812 2.119655 CCGTAGCAGGGACGTAGCT 61.120 63.158 8.90 8.90 42.14 3.32
758 813 1.064296 CGTAGCAGGGACGTAGCTG 59.936 63.158 12.72 0.00 39.30 4.24
759 814 1.227002 GTAGCAGGGACGTAGCTGC 60.227 63.158 12.72 0.00 40.56 5.25
760 815 2.423898 TAGCAGGGACGTAGCTGCC 61.424 63.158 12.72 0.00 41.03 4.85
761 816 2.856039 TAGCAGGGACGTAGCTGCCT 62.856 60.000 12.72 0.00 41.03 4.75
762 817 2.982130 CAGGGACGTAGCTGCCTT 59.018 61.111 0.00 0.00 28.59 4.35
763 818 1.448540 CAGGGACGTAGCTGCCTTG 60.449 63.158 0.00 0.00 28.59 3.61
764 819 1.913762 AGGGACGTAGCTGCCTTGT 60.914 57.895 0.00 0.00 0.00 3.16
765 820 0.613853 AGGGACGTAGCTGCCTTGTA 60.614 55.000 0.00 0.00 0.00 2.41
766 821 0.179108 GGGACGTAGCTGCCTTGTAG 60.179 60.000 0.00 0.00 0.00 2.74
767 822 0.179108 GGACGTAGCTGCCTTGTAGG 60.179 60.000 0.00 0.00 38.80 3.18
777 832 3.191182 CCTTGTAGGCAATGGGGTC 57.809 57.895 0.00 0.00 33.65 4.46
778 833 0.331278 CCTTGTAGGCAATGGGGTCA 59.669 55.000 0.00 0.00 33.65 4.02
779 834 1.272425 CCTTGTAGGCAATGGGGTCAA 60.272 52.381 0.00 0.00 33.65 3.18
780 835 2.624029 CCTTGTAGGCAATGGGGTCAAT 60.624 50.000 0.00 0.00 33.65 2.57
781 836 2.917713 TGTAGGCAATGGGGTCAATT 57.082 45.000 0.00 0.00 0.00 2.32
782 837 2.455557 TGTAGGCAATGGGGTCAATTG 58.544 47.619 0.00 0.00 0.00 2.32
783 838 2.042297 TGTAGGCAATGGGGTCAATTGA 59.958 45.455 3.38 3.38 0.00 2.57
784 839 1.560505 AGGCAATGGGGTCAATTGAC 58.439 50.000 27.16 27.16 44.04 3.18
800 855 8.073467 GTCAATTGACCCCAATAAAATTAGGA 57.927 34.615 25.26 0.00 41.84 2.94
801 856 8.536175 GTCAATTGACCCCAATAAAATTAGGAA 58.464 33.333 25.26 0.00 41.84 3.36
802 857 9.105844 TCAATTGACCCCAATAAAATTAGGAAA 57.894 29.630 3.38 0.00 41.84 3.13
803 858 9.904198 CAATTGACCCCAATAAAATTAGGAAAT 57.096 29.630 0.00 0.00 41.84 2.17
805 860 7.669089 TGACCCCAATAAAATTAGGAAATCC 57.331 36.000 0.00 0.00 0.00 3.01
807 862 7.904022 TGACCCCAATAAAATTAGGAAATCCTT 59.096 33.333 7.39 0.00 46.09 3.36
808 863 8.319057 ACCCCAATAAAATTAGGAAATCCTTC 57.681 34.615 7.39 0.00 46.09 3.46
809 864 7.904022 ACCCCAATAAAATTAGGAAATCCTTCA 59.096 33.333 7.39 0.00 46.09 3.02
810 865 8.937835 CCCCAATAAAATTAGGAAATCCTTCAT 58.062 33.333 7.39 0.00 46.09 2.57
850 905 8.723942 ACACTGTCTATTTAATGAAGATGACC 57.276 34.615 0.00 0.00 0.00 4.02
851 906 7.770897 ACACTGTCTATTTAATGAAGATGACCC 59.229 37.037 0.00 0.00 0.00 4.46
852 907 7.227512 CACTGTCTATTTAATGAAGATGACCCC 59.772 40.741 0.00 0.00 0.00 4.95
853 908 7.092444 ACTGTCTATTTAATGAAGATGACCCCA 60.092 37.037 0.00 0.00 0.00 4.96
854 909 7.054124 TGTCTATTTAATGAAGATGACCCCAC 58.946 38.462 0.00 0.00 0.00 4.61
855 910 7.092444 TGTCTATTTAATGAAGATGACCCCACT 60.092 37.037 0.00 0.00 0.00 4.00
856 911 7.227512 GTCTATTTAATGAAGATGACCCCACTG 59.772 40.741 0.00 0.00 0.00 3.66
857 912 2.134789 AATGAAGATGACCCCACTGC 57.865 50.000 0.00 0.00 0.00 4.40
858 913 0.257039 ATGAAGATGACCCCACTGCC 59.743 55.000 0.00 0.00 0.00 4.85
859 914 1.133181 TGAAGATGACCCCACTGCCA 61.133 55.000 0.00 0.00 0.00 4.92
860 915 0.257039 GAAGATGACCCCACTGCCAT 59.743 55.000 0.00 0.00 0.00 4.40
861 916 1.490490 GAAGATGACCCCACTGCCATA 59.510 52.381 0.00 0.00 0.00 2.74
862 917 1.135094 AGATGACCCCACTGCCATAG 58.865 55.000 0.00 0.00 0.00 2.23
863 918 1.131638 GATGACCCCACTGCCATAGA 58.868 55.000 0.00 0.00 0.00 1.98
864 919 0.839946 ATGACCCCACTGCCATAGAC 59.160 55.000 0.00 0.00 0.00 2.59
865 920 0.546507 TGACCCCACTGCCATAGACA 60.547 55.000 0.00 0.00 0.00 3.41
866 921 0.839946 GACCCCACTGCCATAGACAT 59.160 55.000 0.00 0.00 0.00 3.06
867 922 0.548031 ACCCCACTGCCATAGACATG 59.452 55.000 0.00 0.00 0.00 3.21
868 923 0.839277 CCCCACTGCCATAGACATGA 59.161 55.000 0.00 0.00 33.67 3.07
869 924 1.475751 CCCCACTGCCATAGACATGAC 60.476 57.143 0.00 0.00 33.67 3.06
870 925 1.475751 CCCACTGCCATAGACATGACC 60.476 57.143 0.00 0.00 33.67 4.02
871 926 1.475751 CCACTGCCATAGACATGACCC 60.476 57.143 0.00 0.00 33.67 4.46
872 927 0.839946 ACTGCCATAGACATGACCCC 59.160 55.000 0.00 0.00 33.67 4.95
873 928 0.839277 CTGCCATAGACATGACCCCA 59.161 55.000 0.00 0.00 33.67 4.96
874 929 1.212688 CTGCCATAGACATGACCCCAA 59.787 52.381 0.00 0.00 33.67 4.12
875 930 1.064758 TGCCATAGACATGACCCCAAC 60.065 52.381 0.00 0.00 33.67 3.77
876 931 1.064758 GCCATAGACATGACCCCAACA 60.065 52.381 0.00 0.00 33.67 3.33
877 932 2.620367 GCCATAGACATGACCCCAACAA 60.620 50.000 0.00 0.00 33.67 2.83
878 933 3.696045 CCATAGACATGACCCCAACAAA 58.304 45.455 0.00 0.00 33.67 2.83
879 934 3.443681 CCATAGACATGACCCCAACAAAC 59.556 47.826 0.00 0.00 33.67 2.93
880 935 4.335416 CATAGACATGACCCCAACAAACT 58.665 43.478 0.00 0.00 33.67 2.66
881 936 3.312736 AGACATGACCCCAACAAACTT 57.687 42.857 0.00 0.00 0.00 2.66
882 937 3.642141 AGACATGACCCCAACAAACTTT 58.358 40.909 0.00 0.00 0.00 2.66
883 938 4.030216 AGACATGACCCCAACAAACTTTT 58.970 39.130 0.00 0.00 0.00 2.27
884 939 4.469586 AGACATGACCCCAACAAACTTTTT 59.530 37.500 0.00 0.00 0.00 1.94
954 1009 2.877154 TCTCCTATGGCCTTCTCCTT 57.123 50.000 3.32 0.00 0.00 3.36
1002 1057 2.277692 CGCGCTGCCATTGTCATG 60.278 61.111 5.56 0.00 0.00 3.07
1045 1100 1.864711 CCACCGCATATCTTGGTTACG 59.135 52.381 0.00 0.00 32.48 3.18
1147 1202 1.043673 GGACAGGGCGTACAGGATCT 61.044 60.000 0.00 0.00 0.00 2.75
1245 1300 3.190079 CGACATCACCGATGAGTTTGAT 58.810 45.455 10.81 0.00 42.09 2.57
1365 1420 1.267121 TGGTGTCTCTACTTGCCTCC 58.733 55.000 0.00 0.00 0.00 4.30
1368 1423 1.478916 GTGTCTCTACTTGCCTCCCTC 59.521 57.143 0.00 0.00 0.00 4.30
1489 1544 8.092687 TCCTTAGTTACAACCTCAGTGTTTATC 58.907 37.037 0.00 0.00 0.00 1.75
1526 1581 3.136763 CTGCTGCTTCATACAGGTATGG 58.863 50.000 16.95 5.70 42.32 2.74
1734 1809 9.985730 TCTAATTTGTCAGAAAATTTCAGCAAT 57.014 25.926 8.55 0.00 39.73 3.56
1788 1865 2.409948 ATGCCACTGTAGCCTCTTTC 57.590 50.000 0.00 0.00 0.00 2.62
1808 1885 7.957002 TCTTTCCTTGTTTGGTAAAATGCATA 58.043 30.769 0.00 0.00 0.00 3.14
1866 2484 3.373830 CATTGGAAAGGAATTGGCCCTA 58.626 45.455 0.00 0.00 32.77 3.53
1889 2507 5.814764 TTTCACGGTTTGTTAAGCAAGTA 57.185 34.783 0.00 0.00 38.47 2.24
1890 2508 5.814764 TTCACGGTTTGTTAAGCAAGTAA 57.185 34.783 0.00 0.00 38.47 2.24
1891 2509 5.412526 TCACGGTTTGTTAAGCAAGTAAG 57.587 39.130 0.00 0.00 38.47 2.34
1892 2510 4.877251 TCACGGTTTGTTAAGCAAGTAAGT 59.123 37.500 0.00 0.00 38.47 2.24
1899 2517 7.546316 GGTTTGTTAAGCAAGTAAGTTTTGGAA 59.454 33.333 0.00 0.00 38.47 3.53
1954 2572 8.492673 TCTTAACAGCCAAATCAGTGTATAAG 57.507 34.615 0.00 0.00 0.00 1.73
2218 2841 4.507710 CGACCTTGATGAGAATCCAAAGA 58.492 43.478 0.00 0.00 0.00 2.52
2235 2858 1.649664 AGAAGATGACTGCGACATGC 58.350 50.000 0.00 0.00 46.70 4.06
2266 2890 0.687354 GGACAAGGCTCTGGAAGTGA 59.313 55.000 0.00 0.00 33.76 3.41
2359 2983 1.134367 GCTGGTAGCATAGTCACGTGA 59.866 52.381 15.76 15.76 41.89 4.35
2363 2987 4.011698 TGGTAGCATAGTCACGTGAGTTA 58.988 43.478 29.55 19.50 46.40 2.24
2387 3011 1.412710 GTGTGCCGGATATCTCAGGAA 59.587 52.381 5.05 3.57 38.90 3.36
2424 3055 3.068165 TCATCATCTTGTATCGTTCGGCT 59.932 43.478 0.00 0.00 0.00 5.52
2467 3098 2.806608 TACTTATAAAGCGGGGCGAG 57.193 50.000 0.00 0.00 0.00 5.03
2468 3099 0.532196 ACTTATAAAGCGGGGCGAGC 60.532 55.000 0.00 0.00 0.00 5.03
2486 3117 0.819666 GCGCCTATTTCAAGAGGGGG 60.820 60.000 16.51 2.29 46.73 5.40
2555 3204 4.909696 TCAAGGATCGAGTCTTCTCATC 57.090 45.455 0.00 0.00 40.44 2.92
2558 3207 4.163441 AGGATCGAGTCTTCTCATCTGA 57.837 45.455 0.00 0.00 40.44 3.27
2566 3215 0.809241 CTTCTCATCTGAGCACCGCC 60.809 60.000 2.21 0.00 41.80 6.13
2588 3237 1.402787 CACCAAAAGTTGAGGCCAGT 58.597 50.000 5.01 0.00 0.00 4.00
2605 3254 2.603473 TCTGTCCCGGACCAGGTG 60.603 66.667 15.24 0.91 0.00 4.00
2635 3291 5.529289 ACTCTAACTCTCCCCATCACAATA 58.471 41.667 0.00 0.00 0.00 1.90
2636 3292 5.964477 ACTCTAACTCTCCCCATCACAATAA 59.036 40.000 0.00 0.00 0.00 1.40
2637 3293 6.617371 ACTCTAACTCTCCCCATCACAATAAT 59.383 38.462 0.00 0.00 0.00 1.28
2644 3300 4.277476 TCCCCATCACAATAATGTCAACC 58.723 43.478 0.00 0.00 37.82 3.77
2645 3301 3.066621 CCCCATCACAATAATGTCAACCG 59.933 47.826 0.00 0.00 37.82 4.44
2662 3318 1.228033 CGCAGGATGGATGCCATGA 60.228 57.895 3.25 0.00 45.26 3.07
2737 3405 7.448748 AAGATGGTTTGTTATCACTTGTACC 57.551 36.000 0.00 0.00 0.00 3.34
2747 3415 8.589701 TGTTATCACTTGTACCTCTTAGATGA 57.410 34.615 0.00 0.00 0.00 2.92
2795 3474 4.742167 GTGTGTCTCGACCTGATATTCATG 59.258 45.833 0.00 0.00 0.00 3.07
2796 3475 4.644685 TGTGTCTCGACCTGATATTCATGA 59.355 41.667 0.00 0.00 0.00 3.07
2797 3476 5.218885 GTGTCTCGACCTGATATTCATGAG 58.781 45.833 0.00 0.00 0.00 2.90
2798 3477 4.889995 TGTCTCGACCTGATATTCATGAGT 59.110 41.667 0.00 0.00 0.00 3.41
2799 3478 5.009110 TGTCTCGACCTGATATTCATGAGTC 59.991 44.000 0.00 0.00 0.00 3.36
2800 3479 5.240623 GTCTCGACCTGATATTCATGAGTCT 59.759 44.000 0.00 0.00 0.00 3.24
2802 3481 6.016693 TCTCGACCTGATATTCATGAGTCTTC 60.017 42.308 0.00 0.00 0.00 2.87
2803 3482 5.830457 TCGACCTGATATTCATGAGTCTTCT 59.170 40.000 0.00 0.00 0.00 2.85
2804 3483 5.919707 CGACCTGATATTCATGAGTCTTCTG 59.080 44.000 0.00 0.00 0.00 3.02
2805 3484 5.609423 ACCTGATATTCATGAGTCTTCTGC 58.391 41.667 0.00 0.00 0.00 4.26
2806 3485 5.129980 ACCTGATATTCATGAGTCTTCTGCA 59.870 40.000 0.00 0.00 0.00 4.41
2807 3486 6.183361 ACCTGATATTCATGAGTCTTCTGCAT 60.183 38.462 0.00 0.00 0.00 3.96
2808 3487 6.711194 CCTGATATTCATGAGTCTTCTGCATT 59.289 38.462 0.00 0.00 0.00 3.56
2809 3488 7.228906 CCTGATATTCATGAGTCTTCTGCATTT 59.771 37.037 0.00 0.00 0.00 2.32
2810 3489 7.927048 TGATATTCATGAGTCTTCTGCATTTG 58.073 34.615 0.00 0.00 0.00 2.32
2811 3490 4.430137 TTCATGAGTCTTCTGCATTTGC 57.570 40.909 0.00 0.00 42.50 3.68
2812 3491 3.682696 TCATGAGTCTTCTGCATTTGCT 58.317 40.909 3.94 0.00 42.66 3.91
2813 3492 4.077108 TCATGAGTCTTCTGCATTTGCTT 58.923 39.130 3.94 0.00 42.66 3.91
2814 3493 3.909776 TGAGTCTTCTGCATTTGCTTG 57.090 42.857 3.94 0.00 42.66 4.01
2815 3494 2.555325 TGAGTCTTCTGCATTTGCTTGG 59.445 45.455 3.94 0.00 42.66 3.61
2816 3495 2.555757 GAGTCTTCTGCATTTGCTTGGT 59.444 45.455 3.94 0.00 42.66 3.67
2827 3506 1.588674 TTGCTTGGTTACTGACGGTG 58.411 50.000 0.00 0.00 0.00 4.94
2883 3562 6.441093 CATAATCTGCTGTAGGCTTTGAAA 57.559 37.500 0.00 0.00 42.39 2.69
2920 3604 4.204799 GGGGTTGAACTACTGAAGTGTTT 58.795 43.478 0.00 0.00 38.88 2.83
2948 3639 4.318332 CTGTAATGCACCTTCAGTCTTGA 58.682 43.478 0.00 0.00 0.00 3.02
2959 3650 7.651808 CACCTTCAGTCTTGATGTGTATTTTT 58.348 34.615 0.00 0.00 34.37 1.94
2960 3651 7.805071 CACCTTCAGTCTTGATGTGTATTTTTC 59.195 37.037 0.00 0.00 34.37 2.29
3014 3705 5.399013 GTTTGCTTGGTTATTGATACGCTT 58.601 37.500 0.00 0.00 0.00 4.68
3017 3708 5.179533 TGCTTGGTTATTGATACGCTTGTA 58.820 37.500 0.00 0.00 0.00 2.41
3073 3764 1.676014 CCCAACCGTCCTGACTGAATC 60.676 57.143 0.00 0.00 0.00 2.52
3190 3885 1.903404 CAACAAGCCCGGCTCCTTT 60.903 57.895 13.72 3.27 38.25 3.11
3193 3888 1.379044 CAAGCCCGGCTCCTTTCAT 60.379 57.895 13.72 0.00 38.25 2.57
3205 3900 5.059833 GGCTCCTTTCATGTATAGTTGAGG 58.940 45.833 0.00 0.00 0.00 3.86
3208 3903 5.902681 TCCTTTCATGTATAGTTGAGGACG 58.097 41.667 0.00 0.00 0.00 4.79
3217 3912 2.847234 TTGAGGACGTGGCCACCT 60.847 61.111 29.95 21.58 36.68 4.00
3246 3941 9.398538 TGTACCTATATATGTACGTGCATATGA 57.601 33.333 35.18 25.45 40.88 2.15
3253 3948 2.094130 TGTACGTGCATATGAACCCGAA 60.094 45.455 8.32 0.00 0.00 4.30
3256 3951 1.593006 CGTGCATATGAACCCGAAGAC 59.407 52.381 8.32 0.00 0.00 3.01
3257 3952 2.627945 GTGCATATGAACCCGAAGACA 58.372 47.619 6.97 0.00 0.00 3.41
3258 3953 2.609459 GTGCATATGAACCCGAAGACAG 59.391 50.000 6.97 0.00 0.00 3.51
3259 3954 2.213499 GCATATGAACCCGAAGACAGG 58.787 52.381 6.97 0.00 0.00 4.00
3260 3955 2.158957 GCATATGAACCCGAAGACAGGA 60.159 50.000 6.97 0.00 0.00 3.86
3261 3956 3.681594 GCATATGAACCCGAAGACAGGAA 60.682 47.826 6.97 0.00 0.00 3.36
3262 3957 4.513442 CATATGAACCCGAAGACAGGAAA 58.487 43.478 0.00 0.00 0.00 3.13
3263 3958 3.502123 ATGAACCCGAAGACAGGAAAA 57.498 42.857 0.00 0.00 0.00 2.29
3264 3959 2.846193 TGAACCCGAAGACAGGAAAAG 58.154 47.619 0.00 0.00 0.00 2.27
3265 3960 1.535896 GAACCCGAAGACAGGAAAAGC 59.464 52.381 0.00 0.00 0.00 3.51
3266 3961 0.602905 ACCCGAAGACAGGAAAAGCG 60.603 55.000 0.00 0.00 0.00 4.68
3267 3962 0.602905 CCCGAAGACAGGAAAAGCGT 60.603 55.000 0.00 0.00 0.00 5.07
3268 3963 1.226746 CCGAAGACAGGAAAAGCGTT 58.773 50.000 0.00 0.00 0.00 4.84
3269 3964 1.194772 CCGAAGACAGGAAAAGCGTTC 59.805 52.381 0.00 0.00 0.00 3.95
3270 3965 2.135933 CGAAGACAGGAAAAGCGTTCT 58.864 47.619 3.62 0.00 0.00 3.01
3271 3966 3.314553 CGAAGACAGGAAAAGCGTTCTA 58.685 45.455 3.62 0.00 0.00 2.10
3272 3967 3.365220 CGAAGACAGGAAAAGCGTTCTAG 59.635 47.826 3.62 0.00 0.00 2.43
3273 3968 2.689646 AGACAGGAAAAGCGTTCTAGC 58.310 47.619 3.62 0.00 37.41 3.42
3281 3976 3.145228 AGCGTTCTAGCTTTCTGCC 57.855 52.632 0.00 0.00 46.80 4.85
3282 3977 0.737715 AGCGTTCTAGCTTTCTGCCG 60.738 55.000 0.00 0.00 46.80 5.69
3283 3978 1.710339 CGTTCTAGCTTTCTGCCGC 59.290 57.895 0.00 0.00 44.23 6.53
3284 3979 0.737715 CGTTCTAGCTTTCTGCCGCT 60.738 55.000 0.00 0.00 44.23 5.52
3285 3980 1.469251 CGTTCTAGCTTTCTGCCGCTA 60.469 52.381 0.00 0.00 44.23 4.26
3288 3983 1.823295 TAGCTTTCTGCCGCTAGGG 59.177 57.895 0.00 0.00 44.23 3.53
3289 3984 0.686441 TAGCTTTCTGCCGCTAGGGA 60.686 55.000 8.65 0.00 44.23 4.20
3290 3985 1.815840 GCTTTCTGCCGCTAGGGAC 60.816 63.158 8.65 0.00 38.47 4.46
3291 3986 1.901085 CTTTCTGCCGCTAGGGACT 59.099 57.895 8.65 0.00 46.37 3.85
3292 3987 0.179097 CTTTCTGCCGCTAGGGACTC 60.179 60.000 8.65 0.00 41.75 3.36
3293 3988 1.945354 TTTCTGCCGCTAGGGACTCG 61.945 60.000 8.65 0.00 41.75 4.18
3294 3989 4.577246 CTGCCGCTAGGGACTCGC 62.577 72.222 8.65 3.61 44.20 5.03
3299 3994 3.213402 GCTAGGGACTCGCGCTCT 61.213 66.667 5.56 0.00 37.41 4.09
3300 3995 2.718731 CTAGGGACTCGCGCTCTG 59.281 66.667 5.56 0.00 41.75 3.35
3301 3996 3.477224 CTAGGGACTCGCGCTCTGC 62.477 68.421 5.56 0.00 41.75 4.26
3332 4027 3.917760 CGGCTCCCCTCCATCGAC 61.918 72.222 0.00 0.00 0.00 4.20
3333 4028 2.764128 GGCTCCCCTCCATCGACA 60.764 66.667 0.00 0.00 0.00 4.35
3334 4029 2.367202 GGCTCCCCTCCATCGACAA 61.367 63.158 0.00 0.00 0.00 3.18
3335 4030 1.153349 GCTCCCCTCCATCGACAAC 60.153 63.158 0.00 0.00 0.00 3.32
3336 4031 1.522569 CTCCCCTCCATCGACAACC 59.477 63.158 0.00 0.00 0.00 3.77
3337 4032 0.978146 CTCCCCTCCATCGACAACCT 60.978 60.000 0.00 0.00 0.00 3.50
3338 4033 0.976073 TCCCCTCCATCGACAACCTC 60.976 60.000 0.00 0.00 0.00 3.85
3339 4034 1.141881 CCCTCCATCGACAACCTCG 59.858 63.158 0.00 0.00 44.44 4.63
3340 4035 1.141881 CCTCCATCGACAACCTCGG 59.858 63.158 0.00 0.00 43.16 4.63
3341 4036 1.605058 CCTCCATCGACAACCTCGGT 61.605 60.000 0.00 0.00 43.16 4.69
3342 4037 0.179134 CTCCATCGACAACCTCGGTC 60.179 60.000 0.00 0.00 43.16 4.79
3343 4038 0.896479 TCCATCGACAACCTCGGTCA 60.896 55.000 0.00 0.00 43.16 4.02
3344 4039 0.175760 CCATCGACAACCTCGGTCAT 59.824 55.000 0.00 0.00 43.16 3.06
3345 4040 1.560923 CATCGACAACCTCGGTCATC 58.439 55.000 0.00 0.00 43.16 2.92
3346 4041 0.100682 ATCGACAACCTCGGTCATCG 59.899 55.000 13.01 13.01 43.16 3.84
3347 4042 1.516386 CGACAACCTCGGTCATCGG 60.516 63.158 11.89 0.00 38.87 4.18
3348 4043 1.810030 GACAACCTCGGTCATCGGC 60.810 63.158 0.00 0.00 39.77 5.54
3349 4044 2.264480 CAACCTCGGTCATCGGCA 59.736 61.111 0.00 0.00 39.77 5.69
3350 4045 1.811266 CAACCTCGGTCATCGGCAG 60.811 63.158 0.00 0.00 39.77 4.85
3351 4046 2.283529 AACCTCGGTCATCGGCAGT 61.284 57.895 0.00 0.00 39.77 4.40
3352 4047 2.202797 CCTCGGTCATCGGCAGTG 60.203 66.667 0.00 0.00 39.77 3.66
3353 4048 2.710902 CCTCGGTCATCGGCAGTGA 61.711 63.158 0.00 0.00 39.77 3.41
3354 4049 1.226802 CTCGGTCATCGGCAGTGAG 60.227 63.158 0.00 0.00 39.77 3.51
3355 4050 2.202797 CGGTCATCGGCAGTGAGG 60.203 66.667 0.00 0.00 34.75 3.86
3356 4051 2.187946 GGTCATCGGCAGTGAGGG 59.812 66.667 0.00 0.00 0.00 4.30
3357 4052 2.187946 GTCATCGGCAGTGAGGGG 59.812 66.667 0.00 0.00 0.00 4.79
3358 4053 3.083349 TCATCGGCAGTGAGGGGG 61.083 66.667 0.00 0.00 0.00 5.40
3390 4085 3.634730 CACGCGTGTGGATAGTTTTAG 57.365 47.619 30.50 0.00 42.59 1.85
3391 4086 3.247442 CACGCGTGTGGATAGTTTTAGA 58.753 45.455 30.50 0.00 42.59 2.10
3392 4087 3.060363 CACGCGTGTGGATAGTTTTAGAC 59.940 47.826 30.50 0.00 42.59 2.59
3393 4088 2.601763 CGCGTGTGGATAGTTTTAGACC 59.398 50.000 0.00 0.00 0.00 3.85
3394 4089 3.592059 GCGTGTGGATAGTTTTAGACCA 58.408 45.455 0.00 0.00 0.00 4.02
3395 4090 3.998341 GCGTGTGGATAGTTTTAGACCAA 59.002 43.478 0.00 0.00 32.32 3.67
3396 4091 4.453136 GCGTGTGGATAGTTTTAGACCAAA 59.547 41.667 0.00 0.00 32.32 3.28
3397 4092 5.616204 GCGTGTGGATAGTTTTAGACCAAAC 60.616 44.000 0.00 0.00 36.03 2.93
3398 4093 5.699458 CGTGTGGATAGTTTTAGACCAAACT 59.301 40.000 0.00 4.37 46.54 2.66
3427 4122 3.334583 TTTTTAGGCTGCTCATCGTCT 57.665 42.857 0.00 0.00 0.00 4.18
3428 4123 3.334583 TTTTAGGCTGCTCATCGTCTT 57.665 42.857 0.00 0.00 0.00 3.01
3429 4124 2.299993 TTAGGCTGCTCATCGTCTTG 57.700 50.000 0.00 0.00 0.00 3.02
3430 4125 1.474330 TAGGCTGCTCATCGTCTTGA 58.526 50.000 0.00 0.00 0.00 3.02
3431 4126 0.108424 AGGCTGCTCATCGTCTTGAC 60.108 55.000 0.00 0.00 0.00 3.18
3432 4127 0.108424 GGCTGCTCATCGTCTTGACT 60.108 55.000 0.00 0.00 0.00 3.41
3433 4128 1.674221 GGCTGCTCATCGTCTTGACTT 60.674 52.381 0.00 0.00 0.00 3.01
3434 4129 1.658095 GCTGCTCATCGTCTTGACTTC 59.342 52.381 0.00 0.00 0.00 3.01
3435 4130 1.916651 CTGCTCATCGTCTTGACTTCG 59.083 52.381 0.00 0.00 0.00 3.79
3436 4131 1.272781 GCTCATCGTCTTGACTTCGG 58.727 55.000 0.00 0.00 0.00 4.30
3437 4132 1.402984 GCTCATCGTCTTGACTTCGGT 60.403 52.381 0.00 0.00 0.00 4.69
3438 4133 2.254459 CTCATCGTCTTGACTTCGGTG 58.746 52.381 0.00 0.00 37.09 4.94
3439 4134 1.067846 TCATCGTCTTGACTTCGGTGG 60.068 52.381 0.00 0.00 36.52 4.61
3440 4135 0.389948 ATCGTCTTGACTTCGGTGGC 60.390 55.000 0.00 0.00 0.00 5.01
3441 4136 1.300620 CGTCTTGACTTCGGTGGCA 60.301 57.895 0.00 0.00 0.00 4.92
3442 4137 1.557443 CGTCTTGACTTCGGTGGCAC 61.557 60.000 9.70 9.70 0.00 5.01
3443 4138 0.249911 GTCTTGACTTCGGTGGCACT 60.250 55.000 18.45 0.00 0.00 4.40
3444 4139 0.249868 TCTTGACTTCGGTGGCACTG 60.250 55.000 20.50 20.50 0.00 3.66
3445 4140 0.249868 CTTGACTTCGGTGGCACTGA 60.250 55.000 24.78 24.78 0.00 3.41
3446 4141 0.179234 TTGACTTCGGTGGCACTGAA 59.821 50.000 33.22 33.22 40.89 3.02
3447 4142 0.396435 TGACTTCGGTGGCACTGAAT 59.604 50.000 34.92 25.71 42.10 2.57
3448 4143 1.621317 TGACTTCGGTGGCACTGAATA 59.379 47.619 34.92 23.42 42.10 1.75
3449 4144 2.037902 TGACTTCGGTGGCACTGAATAA 59.962 45.455 34.92 22.79 42.10 1.40
3450 4145 3.071479 GACTTCGGTGGCACTGAATAAA 58.929 45.455 34.92 18.25 42.10 1.40
3451 4146 3.482436 ACTTCGGTGGCACTGAATAAAA 58.518 40.909 34.92 17.91 42.10 1.52
3452 4147 4.079253 ACTTCGGTGGCACTGAATAAAAT 58.921 39.130 34.92 18.89 42.10 1.82
3453 4148 4.522789 ACTTCGGTGGCACTGAATAAAATT 59.477 37.500 34.92 16.52 42.10 1.82
3454 4149 5.010617 ACTTCGGTGGCACTGAATAAAATTT 59.989 36.000 34.92 15.08 42.10 1.82
3455 4150 5.054390 TCGGTGGCACTGAATAAAATTTC 57.946 39.130 26.21 0.00 28.96 2.17
3456 4151 4.764823 TCGGTGGCACTGAATAAAATTTCT 59.235 37.500 26.21 0.00 28.96 2.52
3457 4152 5.242838 TCGGTGGCACTGAATAAAATTTCTT 59.757 36.000 26.21 0.00 28.96 2.52
3458 4153 5.572896 CGGTGGCACTGAATAAAATTTCTTC 59.427 40.000 21.95 0.00 0.00 2.87
3459 4154 6.454795 GGTGGCACTGAATAAAATTTCTTCA 58.545 36.000 18.45 12.83 0.00 3.02
3461 4156 7.370383 GTGGCACTGAATAAAATTTCTTCAGA 58.630 34.615 30.77 17.03 45.57 3.27
3462 4157 8.031277 GTGGCACTGAATAAAATTTCTTCAGAT 58.969 33.333 30.77 20.12 45.57 2.90
3463 4158 8.246180 TGGCACTGAATAAAATTTCTTCAGATC 58.754 33.333 30.77 23.91 45.57 2.75
3464 4159 7.704047 GGCACTGAATAAAATTTCTTCAGATCC 59.296 37.037 30.77 26.49 45.57 3.36
3465 4160 8.465201 GCACTGAATAAAATTTCTTCAGATCCT 58.535 33.333 30.77 17.03 45.57 3.24
3471 4166 8.894768 ATAAAATTTCTTCAGATCCTACTCCG 57.105 34.615 0.00 0.00 0.00 4.63
3472 4167 6.546428 AAATTTCTTCAGATCCTACTCCGA 57.454 37.500 0.00 0.00 0.00 4.55
3473 4168 6.739331 AATTTCTTCAGATCCTACTCCGAT 57.261 37.500 0.00 0.00 0.00 4.18
3474 4169 5.521906 TTTCTTCAGATCCTACTCCGATG 57.478 43.478 0.00 0.00 0.00 3.84
3475 4170 4.439253 TCTTCAGATCCTACTCCGATGA 57.561 45.455 0.00 0.00 0.00 2.92
3476 4171 4.138290 TCTTCAGATCCTACTCCGATGAC 58.862 47.826 0.00 0.00 0.00 3.06
3477 4172 2.495084 TCAGATCCTACTCCGATGACG 58.505 52.381 0.00 0.00 39.43 4.35
3478 4173 2.104281 TCAGATCCTACTCCGATGACGA 59.896 50.000 0.00 0.00 42.66 4.20
3479 4174 3.078097 CAGATCCTACTCCGATGACGAT 58.922 50.000 0.00 0.00 42.66 3.73
3480 4175 3.504134 CAGATCCTACTCCGATGACGATT 59.496 47.826 0.00 0.00 42.66 3.34
3481 4176 3.504134 AGATCCTACTCCGATGACGATTG 59.496 47.826 0.00 0.00 42.66 2.67
3482 4177 1.954382 TCCTACTCCGATGACGATTGG 59.046 52.381 0.00 0.00 42.66 3.16
3483 4178 1.603172 CCTACTCCGATGACGATTGGC 60.603 57.143 0.00 0.00 42.66 4.52
3484 4179 1.338337 CTACTCCGATGACGATTGGCT 59.662 52.381 0.00 0.00 42.66 4.75
3485 4180 0.103208 ACTCCGATGACGATTGGCTC 59.897 55.000 0.00 0.00 42.66 4.70
3486 4181 0.387202 CTCCGATGACGATTGGCTCT 59.613 55.000 0.00 0.00 42.66 4.09
3487 4182 1.609072 CTCCGATGACGATTGGCTCTA 59.391 52.381 0.00 0.00 42.66 2.43
3488 4183 1.337071 TCCGATGACGATTGGCTCTAC 59.663 52.381 0.00 0.00 42.66 2.59
3489 4184 1.603172 CCGATGACGATTGGCTCTACC 60.603 57.143 0.00 0.00 42.66 3.18
3490 4185 1.772182 GATGACGATTGGCTCTACCG 58.228 55.000 0.00 0.00 43.94 4.02
3491 4186 1.067212 GATGACGATTGGCTCTACCGT 59.933 52.381 0.00 0.00 43.94 4.83
3492 4187 0.892755 TGACGATTGGCTCTACCGTT 59.107 50.000 0.00 0.00 43.94 4.44
3493 4188 1.278238 GACGATTGGCTCTACCGTTG 58.722 55.000 0.00 0.00 43.94 4.10
3494 4189 0.108329 ACGATTGGCTCTACCGTTGG 60.108 55.000 0.00 0.00 43.94 3.77
3495 4190 0.810031 CGATTGGCTCTACCGTTGGG 60.810 60.000 0.00 0.00 43.94 4.12
3496 4191 0.463833 GATTGGCTCTACCGTTGGGG 60.464 60.000 0.00 0.00 43.94 4.96
3497 4192 0.912487 ATTGGCTCTACCGTTGGGGA 60.912 55.000 0.00 0.00 43.94 4.81
3498 4193 0.912487 TTGGCTCTACCGTTGGGGAT 60.912 55.000 0.00 0.00 43.94 3.85
3499 4194 1.146263 GGCTCTACCGTTGGGGATG 59.854 63.158 0.00 0.00 39.97 3.51
3500 4195 1.335132 GGCTCTACCGTTGGGGATGA 61.335 60.000 0.00 0.00 39.97 2.92
3501 4196 0.539986 GCTCTACCGTTGGGGATGAA 59.460 55.000 0.00 0.00 39.97 2.57
3502 4197 1.141053 GCTCTACCGTTGGGGATGAAT 59.859 52.381 0.00 0.00 39.97 2.57
3503 4198 2.421529 GCTCTACCGTTGGGGATGAATT 60.422 50.000 0.00 0.00 39.97 2.17
3504 4199 3.886123 CTCTACCGTTGGGGATGAATTT 58.114 45.455 0.00 0.00 39.97 1.82
3505 4200 3.616219 TCTACCGTTGGGGATGAATTTG 58.384 45.455 0.00 0.00 39.97 2.32
3506 4201 1.555967 ACCGTTGGGGATGAATTTGG 58.444 50.000 0.00 0.00 39.97 3.28
3507 4202 1.076350 ACCGTTGGGGATGAATTTGGA 59.924 47.619 0.00 0.00 39.97 3.53
3508 4203 2.175202 CCGTTGGGGATGAATTTGGAA 58.825 47.619 0.00 0.00 38.47 3.53
3509 4204 2.765699 CCGTTGGGGATGAATTTGGAAT 59.234 45.455 0.00 0.00 38.47 3.01
3510 4205 3.181476 CCGTTGGGGATGAATTTGGAATC 60.181 47.826 0.00 0.00 38.47 2.52
3511 4206 3.181476 CGTTGGGGATGAATTTGGAATCC 60.181 47.826 0.00 0.00 39.38 3.01
3512 4207 3.772955 TGGGGATGAATTTGGAATCCA 57.227 42.857 0.00 0.00 41.48 3.41
3513 4208 3.645434 TGGGGATGAATTTGGAATCCAG 58.355 45.455 0.86 0.00 41.48 3.86
3514 4209 3.012730 TGGGGATGAATTTGGAATCCAGT 59.987 43.478 0.86 0.00 41.48 4.00
3515 4210 3.638627 GGGGATGAATTTGGAATCCAGTC 59.361 47.826 0.86 2.54 41.48 3.51
3516 4211 4.540715 GGGATGAATTTGGAATCCAGTCT 58.459 43.478 0.86 0.00 41.48 3.24
3517 4212 5.399038 GGGGATGAATTTGGAATCCAGTCTA 60.399 44.000 0.86 0.00 41.48 2.59
3518 4213 6.310149 GGGATGAATTTGGAATCCAGTCTAT 58.690 40.000 0.86 0.00 41.48 1.98
3519 4214 6.779539 GGGATGAATTTGGAATCCAGTCTATT 59.220 38.462 0.86 1.73 41.48 1.73
3520 4215 7.040132 GGGATGAATTTGGAATCCAGTCTATTC 60.040 40.741 0.86 10.79 41.48 1.75
3521 4216 7.503566 GGATGAATTTGGAATCCAGTCTATTCA 59.496 37.037 21.72 21.72 39.79 2.57
3522 4217 8.827832 ATGAATTTGGAATCCAGTCTATTCAA 57.172 30.769 22.55 7.82 35.17 2.69
3523 4218 8.055279 TGAATTTGGAATCCAGTCTATTCAAC 57.945 34.615 19.36 4.85 35.46 3.18
3524 4219 7.122650 TGAATTTGGAATCCAGTCTATTCAACC 59.877 37.037 19.36 0.00 35.46 3.77
3525 4220 5.512942 TTGGAATCCAGTCTATTCAACCA 57.487 39.130 0.86 0.00 35.46 3.67
3526 4221 5.512942 TGGAATCCAGTCTATTCAACCAA 57.487 39.130 0.00 0.00 35.46 3.67
3527 4222 5.500234 TGGAATCCAGTCTATTCAACCAAG 58.500 41.667 0.00 0.00 35.46 3.61
3528 4223 4.884164 GGAATCCAGTCTATTCAACCAAGG 59.116 45.833 0.00 0.00 35.46 3.61
3529 4224 5.339200 GGAATCCAGTCTATTCAACCAAGGA 60.339 44.000 0.00 0.00 35.46 3.36
3530 4225 5.983333 ATCCAGTCTATTCAACCAAGGAT 57.017 39.130 0.00 0.00 0.00 3.24
3531 4226 5.102953 TCCAGTCTATTCAACCAAGGATG 57.897 43.478 0.00 0.00 0.00 3.51
3532 4227 8.600665 GAATCCAGTCTATTCAACCAAGGATGG 61.601 44.444 0.00 0.00 41.18 3.51
3540 4235 3.443045 CCAAGGATGGTGTGGCGC 61.443 66.667 0.00 0.00 42.18 6.53
3541 4236 2.360350 CAAGGATGGTGTGGCGCT 60.360 61.111 7.64 0.00 0.00 5.92
3542 4237 2.360350 AAGGATGGTGTGGCGCTG 60.360 61.111 7.64 0.00 0.00 5.18
3543 4238 3.925630 AAGGATGGTGTGGCGCTGG 62.926 63.158 7.64 0.00 0.00 4.85
3565 4260 3.249189 ACCTCGTGGTGGGCATGT 61.249 61.111 8.68 0.00 46.51 3.21
3566 4261 2.747460 CCTCGTGGTGGGCATGTG 60.747 66.667 0.00 0.00 0.00 3.21
3567 4262 2.032528 CTCGTGGTGGGCATGTGT 59.967 61.111 0.00 0.00 0.00 3.72
3568 4263 2.031919 TCGTGGTGGGCATGTGTC 59.968 61.111 0.00 0.00 0.00 3.67
3569 4264 3.055719 CGTGGTGGGCATGTGTCC 61.056 66.667 0.00 0.00 41.09 4.02
3570 4265 2.436109 GTGGTGGGCATGTGTCCT 59.564 61.111 5.12 0.00 41.34 3.85
3571 4266 1.675641 GTGGTGGGCATGTGTCCTC 60.676 63.158 5.12 1.05 41.34 3.71
3572 4267 2.152729 TGGTGGGCATGTGTCCTCA 61.153 57.895 5.12 1.14 41.34 3.86
3573 4268 1.377725 GGTGGGCATGTGTCCTCAG 60.378 63.158 5.12 0.00 41.34 3.35
3574 4269 1.377725 GTGGGCATGTGTCCTCAGG 60.378 63.158 5.12 0.00 41.34 3.86
3575 4270 2.439156 GGGCATGTGTCCTCAGGC 60.439 66.667 0.00 0.00 43.11 4.85
3576 4271 2.673523 GGCATGTGTCCTCAGGCT 59.326 61.111 6.05 0.00 43.32 4.58
3577 4272 1.451028 GGCATGTGTCCTCAGGCTC 60.451 63.158 6.05 0.00 43.32 4.70
3578 4273 1.451028 GCATGTGTCCTCAGGCTCC 60.451 63.158 0.00 0.00 41.09 4.70
3579 4274 1.153489 CATGTGTCCTCAGGCTCCG 60.153 63.158 0.00 0.00 0.00 4.63
3580 4275 3.023949 ATGTGTCCTCAGGCTCCGC 62.024 63.158 0.00 0.00 0.00 5.54
3581 4276 3.386237 GTGTCCTCAGGCTCCGCT 61.386 66.667 0.00 0.00 0.00 5.52
3582 4277 3.385384 TGTCCTCAGGCTCCGCTG 61.385 66.667 0.00 0.00 0.00 5.18
3583 4278 3.386237 GTCCTCAGGCTCCGCTGT 61.386 66.667 0.00 0.00 0.00 4.40
3584 4279 2.604686 TCCTCAGGCTCCGCTGTT 60.605 61.111 0.00 0.00 0.00 3.16
3585 4280 2.435586 CCTCAGGCTCCGCTGTTG 60.436 66.667 0.00 0.00 0.00 3.33
3586 4281 3.123620 CTCAGGCTCCGCTGTTGC 61.124 66.667 0.00 0.00 0.00 4.17
3597 4292 2.695055 CTGTTGCGACGGCGTATG 59.305 61.111 14.74 10.31 44.10 2.39
3598 4293 3.420222 CTGTTGCGACGGCGTATGC 62.420 63.158 24.55 24.55 44.10 3.14
3599 4294 3.186047 GTTGCGACGGCGTATGCT 61.186 61.111 28.93 2.40 44.10 3.79
3600 4295 2.883730 TTGCGACGGCGTATGCTC 60.884 61.111 28.93 11.25 44.10 4.26
3601 4296 4.865761 TGCGACGGCGTATGCTCC 62.866 66.667 28.93 10.58 44.10 4.70
3602 4297 4.865761 GCGACGGCGTATGCTCCA 62.866 66.667 24.18 0.00 42.25 3.86
3603 4298 2.655364 CGACGGCGTATGCTCCAG 60.655 66.667 14.74 0.00 42.25 3.86
3604 4299 2.962253 GACGGCGTATGCTCCAGC 60.962 66.667 14.74 0.00 42.25 4.85
3605 4300 4.873129 ACGGCGTATGCTCCAGCG 62.873 66.667 12.58 3.95 45.83 5.18
3606 4301 4.873129 CGGCGTATGCTCCAGCGT 62.873 66.667 6.92 0.00 45.83 5.07
3607 4302 2.962253 GGCGTATGCTCCAGCGTC 60.962 66.667 6.92 0.00 45.83 5.19
3608 4303 3.323136 GCGTATGCTCCAGCGTCG 61.323 66.667 0.00 2.90 45.83 5.12
3609 4304 2.655364 CGTATGCTCCAGCGTCGG 60.655 66.667 0.00 0.00 45.83 4.79
3610 4305 2.962253 GTATGCTCCAGCGTCGGC 60.962 66.667 0.00 0.00 45.83 5.54
3611 4306 3.457263 TATGCTCCAGCGTCGGCA 61.457 61.111 0.00 0.00 45.83 5.69
3612 4307 3.716539 TATGCTCCAGCGTCGGCAC 62.717 63.158 0.00 0.00 45.83 5.01
3625 4320 4.785453 GGCACGGAGCTTGGGAGG 62.785 72.222 2.14 0.00 44.79 4.30
3626 4321 4.021925 GCACGGAGCTTGGGAGGT 62.022 66.667 0.00 0.00 41.15 3.85
3627 4322 2.656069 GCACGGAGCTTGGGAGGTA 61.656 63.158 0.00 0.00 41.15 3.08
3628 4323 1.517832 CACGGAGCTTGGGAGGTAG 59.482 63.158 0.00 0.00 32.79 3.18
3629 4324 1.078710 ACGGAGCTTGGGAGGTAGT 59.921 57.895 0.00 0.00 32.79 2.73
3630 4325 0.971447 ACGGAGCTTGGGAGGTAGTC 60.971 60.000 0.00 0.00 32.79 2.59
3631 4326 0.684805 CGGAGCTTGGGAGGTAGTCT 60.685 60.000 0.00 0.00 32.79 3.24
3632 4327 1.409802 CGGAGCTTGGGAGGTAGTCTA 60.410 57.143 0.00 0.00 32.79 2.59
3633 4328 2.312390 GGAGCTTGGGAGGTAGTCTAG 58.688 57.143 0.00 0.00 32.79 2.43
3634 4329 2.312390 GAGCTTGGGAGGTAGTCTAGG 58.688 57.143 0.00 0.00 32.79 3.02
3635 4330 1.930914 AGCTTGGGAGGTAGTCTAGGA 59.069 52.381 0.00 0.00 0.00 2.94
3636 4331 2.091555 AGCTTGGGAGGTAGTCTAGGAG 60.092 54.545 0.00 0.00 0.00 3.69
3637 4332 2.312390 CTTGGGAGGTAGTCTAGGAGC 58.688 57.143 0.00 0.00 0.00 4.70
3638 4333 0.183014 TGGGAGGTAGTCTAGGAGCG 59.817 60.000 0.00 0.00 0.00 5.03
3639 4334 0.473326 GGGAGGTAGTCTAGGAGCGA 59.527 60.000 0.00 0.00 0.00 4.93
3640 4335 1.133853 GGGAGGTAGTCTAGGAGCGAA 60.134 57.143 0.00 0.00 0.00 4.70
3641 4336 2.489437 GGGAGGTAGTCTAGGAGCGAAT 60.489 54.545 0.00 0.00 0.00 3.34
3642 4337 2.554893 GGAGGTAGTCTAGGAGCGAATG 59.445 54.545 0.00 0.00 0.00 2.67
3643 4338 1.957877 AGGTAGTCTAGGAGCGAATGC 59.042 52.381 0.00 0.00 43.24 3.56
3644 4339 1.681793 GGTAGTCTAGGAGCGAATGCA 59.318 52.381 0.00 0.00 46.23 3.96
3645 4340 2.287909 GGTAGTCTAGGAGCGAATGCAG 60.288 54.545 0.00 0.00 46.23 4.41
3646 4341 1.769026 AGTCTAGGAGCGAATGCAGA 58.231 50.000 0.00 0.00 46.23 4.26
3647 4342 2.315176 AGTCTAGGAGCGAATGCAGAT 58.685 47.619 0.00 0.00 46.23 2.90
3648 4343 2.697751 AGTCTAGGAGCGAATGCAGATT 59.302 45.455 0.00 0.00 46.23 2.40
3649 4344 2.799412 GTCTAGGAGCGAATGCAGATTG 59.201 50.000 0.00 0.00 46.23 2.67
3650 4345 2.432146 TCTAGGAGCGAATGCAGATTGT 59.568 45.455 0.00 0.00 46.23 2.71
3651 4346 1.376543 AGGAGCGAATGCAGATTGTG 58.623 50.000 0.00 0.00 46.23 3.33
3652 4347 0.379669 GGAGCGAATGCAGATTGTGG 59.620 55.000 0.00 0.00 46.23 4.17
3653 4348 1.089920 GAGCGAATGCAGATTGTGGT 58.910 50.000 0.00 0.00 46.23 4.16
3654 4349 1.063174 GAGCGAATGCAGATTGTGGTC 59.937 52.381 0.00 0.00 46.23 4.02
3655 4350 1.089920 GCGAATGCAGATTGTGGTCT 58.910 50.000 0.00 0.00 42.15 3.85
3656 4351 1.202110 GCGAATGCAGATTGTGGTCTG 60.202 52.381 0.00 0.00 46.59 3.51
3657 4352 2.079158 CGAATGCAGATTGTGGTCTGT 58.921 47.619 5.87 0.00 45.80 3.41
3658 4353 2.159612 CGAATGCAGATTGTGGTCTGTG 60.160 50.000 5.87 0.00 45.80 3.66
3659 4354 2.574006 ATGCAGATTGTGGTCTGTGT 57.426 45.000 5.87 0.00 45.80 3.72
3660 4355 1.882912 TGCAGATTGTGGTCTGTGTC 58.117 50.000 5.87 0.00 45.80 3.67
3661 4356 0.792640 GCAGATTGTGGTCTGTGTCG 59.207 55.000 5.87 0.00 45.80 4.35
3662 4357 1.605457 GCAGATTGTGGTCTGTGTCGA 60.605 52.381 5.87 0.00 45.80 4.20
3663 4358 2.061773 CAGATTGTGGTCTGTGTCGAC 58.938 52.381 9.11 9.11 40.54 4.20
3664 4359 1.060713 GATTGTGGTCTGTGTCGACG 58.939 55.000 11.62 0.00 34.75 5.12
3665 4360 0.671796 ATTGTGGTCTGTGTCGACGA 59.328 50.000 11.62 0.00 34.75 4.20
3666 4361 0.248743 TTGTGGTCTGTGTCGACGAC 60.249 55.000 20.97 20.97 41.29 4.34
3667 4362 1.099295 TGTGGTCTGTGTCGACGACT 61.099 55.000 26.86 0.00 41.42 4.18
3668 4363 0.030369 GTGGTCTGTGTCGACGACTT 59.970 55.000 26.86 0.00 38.90 3.01
3669 4364 0.309922 TGGTCTGTGTCGACGACTTC 59.690 55.000 26.86 19.54 34.75 3.01
3670 4365 0.592148 GGTCTGTGTCGACGACTTCT 59.408 55.000 26.86 0.00 34.75 2.85
3671 4366 1.802960 GGTCTGTGTCGACGACTTCTA 59.197 52.381 26.86 5.60 34.75 2.10
3672 4367 2.225019 GGTCTGTGTCGACGACTTCTAA 59.775 50.000 26.86 5.21 34.75 2.10
3673 4368 3.304257 GGTCTGTGTCGACGACTTCTAAA 60.304 47.826 26.86 4.45 34.75 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
179 191 1.153309 GGTTACCACGAATCCCCGG 60.153 63.158 0.00 0.00 0.00 5.73
264 278 0.179018 GCGGCCACCAAATCCTAGAT 60.179 55.000 2.24 0.00 0.00 1.98
283 297 4.274069 CAATGTCCAATACGAATTCTGCG 58.726 43.478 3.52 0.00 0.00 5.18
311 325 4.574674 AATTCCAATCTACACCTGCTCA 57.425 40.909 0.00 0.00 0.00 4.26
497 533 0.178533 TCTTCAACGACCACGGGTTT 59.821 50.000 0.00 0.00 44.46 3.27
652 689 3.213506 CATCTGATGCCCGTGGAAAATA 58.786 45.455 4.47 0.00 0.00 1.40
740 795 1.064296 CAGCTACGTCCCTGCTACG 59.936 63.158 0.00 0.00 45.64 3.51
745 800 1.448540 CAAGGCAGCTACGTCCCTG 60.449 63.158 10.17 10.17 0.00 4.45
746 801 0.613853 TACAAGGCAGCTACGTCCCT 60.614 55.000 0.00 0.00 0.00 4.20
747 802 0.179108 CTACAAGGCAGCTACGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
748 803 0.179108 CCTACAAGGCAGCTACGTCC 60.179 60.000 0.00 0.00 0.00 4.79
749 804 3.347411 CCTACAAGGCAGCTACGTC 57.653 57.895 0.00 0.00 0.00 4.34
759 814 0.331278 TGACCCCATTGCCTACAAGG 59.669 55.000 0.00 0.00 39.69 3.61
760 815 2.214376 TTGACCCCATTGCCTACAAG 57.786 50.000 0.00 0.00 39.69 3.16
761 816 2.830923 CAATTGACCCCATTGCCTACAA 59.169 45.455 0.00 0.00 40.87 2.41
762 817 2.042297 TCAATTGACCCCATTGCCTACA 59.958 45.455 3.38 0.00 0.00 2.74
763 818 2.427095 GTCAATTGACCCCATTGCCTAC 59.573 50.000 25.26 0.00 39.07 3.18
764 819 2.733956 GTCAATTGACCCCATTGCCTA 58.266 47.619 25.26 0.00 39.07 3.93
765 820 1.560505 GTCAATTGACCCCATTGCCT 58.439 50.000 25.26 0.00 39.07 4.75
775 830 8.073467 TCCTAATTTTATTGGGGTCAATTGAC 57.927 34.615 27.16 27.16 42.90 3.18
776 831 8.671987 TTCCTAATTTTATTGGGGTCAATTGA 57.328 30.769 3.38 3.38 42.90 2.57
777 832 9.904198 ATTTCCTAATTTTATTGGGGTCAATTG 57.096 29.630 0.00 0.00 42.90 2.32
779 834 8.713971 GGATTTCCTAATTTTATTGGGGTCAAT 58.286 33.333 2.52 0.00 44.87 2.57
780 835 7.904022 AGGATTTCCTAATTTTATTGGGGTCAA 59.096 33.333 0.00 0.00 46.48 3.18
781 836 7.426667 AGGATTTCCTAATTTTATTGGGGTCA 58.573 34.615 0.00 0.00 46.48 4.02
782 837 7.914427 AGGATTTCCTAATTTTATTGGGGTC 57.086 36.000 0.00 0.32 46.48 4.46
824 879 9.167311 GGTCATCTTCATTAAATAGACAGTGTT 57.833 33.333 0.00 0.00 0.00 3.32
825 880 7.770897 GGGTCATCTTCATTAAATAGACAGTGT 59.229 37.037 0.00 0.00 0.00 3.55
826 881 7.227512 GGGGTCATCTTCATTAAATAGACAGTG 59.772 40.741 0.00 0.00 0.00 3.66
827 882 7.092444 TGGGGTCATCTTCATTAAATAGACAGT 60.092 37.037 0.00 0.00 0.00 3.55
828 883 7.227512 GTGGGGTCATCTTCATTAAATAGACAG 59.772 40.741 0.00 0.00 0.00 3.51
829 884 7.054124 GTGGGGTCATCTTCATTAAATAGACA 58.946 38.462 0.00 0.00 0.00 3.41
830 885 7.227512 CAGTGGGGTCATCTTCATTAAATAGAC 59.772 40.741 0.00 0.00 0.00 2.59
831 886 7.282585 CAGTGGGGTCATCTTCATTAAATAGA 58.717 38.462 0.00 0.00 0.00 1.98
832 887 6.016777 GCAGTGGGGTCATCTTCATTAAATAG 60.017 42.308 0.00 0.00 0.00 1.73
833 888 5.827797 GCAGTGGGGTCATCTTCATTAAATA 59.172 40.000 0.00 0.00 0.00 1.40
834 889 4.646492 GCAGTGGGGTCATCTTCATTAAAT 59.354 41.667 0.00 0.00 0.00 1.40
835 890 4.016444 GCAGTGGGGTCATCTTCATTAAA 58.984 43.478 0.00 0.00 0.00 1.52
836 891 3.620488 GCAGTGGGGTCATCTTCATTAA 58.380 45.455 0.00 0.00 0.00 1.40
837 892 2.092429 GGCAGTGGGGTCATCTTCATTA 60.092 50.000 0.00 0.00 0.00 1.90
838 893 1.341383 GGCAGTGGGGTCATCTTCATT 60.341 52.381 0.00 0.00 0.00 2.57
839 894 0.257039 GGCAGTGGGGTCATCTTCAT 59.743 55.000 0.00 0.00 0.00 2.57
840 895 1.133181 TGGCAGTGGGGTCATCTTCA 61.133 55.000 0.00 0.00 0.00 3.02
841 896 0.257039 ATGGCAGTGGGGTCATCTTC 59.743 55.000 0.00 0.00 0.00 2.87
842 897 1.492176 CTATGGCAGTGGGGTCATCTT 59.508 52.381 0.00 0.00 34.40 2.40
843 898 1.135094 CTATGGCAGTGGGGTCATCT 58.865 55.000 0.00 0.00 34.40 2.90
844 899 1.131638 TCTATGGCAGTGGGGTCATC 58.868 55.000 0.00 0.00 34.40 2.92
845 900 0.839946 GTCTATGGCAGTGGGGTCAT 59.160 55.000 0.00 0.00 36.90 3.06
846 901 0.546507 TGTCTATGGCAGTGGGGTCA 60.547 55.000 0.00 0.00 0.00 4.02
847 902 0.839946 ATGTCTATGGCAGTGGGGTC 59.160 55.000 0.00 0.00 0.00 4.46
848 903 0.548031 CATGTCTATGGCAGTGGGGT 59.452 55.000 0.00 0.00 0.00 4.95
849 904 0.839277 TCATGTCTATGGCAGTGGGG 59.161 55.000 0.00 0.00 34.97 4.96
850 905 1.475751 GGTCATGTCTATGGCAGTGGG 60.476 57.143 0.00 0.00 40.72 4.61
851 906 1.475751 GGGTCATGTCTATGGCAGTGG 60.476 57.143 0.00 0.00 40.72 4.00
852 907 1.475751 GGGGTCATGTCTATGGCAGTG 60.476 57.143 0.00 0.00 40.72 3.66
853 908 0.839946 GGGGTCATGTCTATGGCAGT 59.160 55.000 0.00 0.00 40.72 4.40
854 909 0.839277 TGGGGTCATGTCTATGGCAG 59.161 55.000 0.00 0.00 40.72 4.85
855 910 1.064758 GTTGGGGTCATGTCTATGGCA 60.065 52.381 0.00 0.00 40.72 4.92
856 911 1.064758 TGTTGGGGTCATGTCTATGGC 60.065 52.381 0.00 0.00 38.20 4.40
857 912 3.364460 TTGTTGGGGTCATGTCTATGG 57.636 47.619 0.00 0.00 34.97 2.74
858 913 4.335416 AGTTTGTTGGGGTCATGTCTATG 58.665 43.478 0.00 0.00 35.57 2.23
859 914 4.657814 AGTTTGTTGGGGTCATGTCTAT 57.342 40.909 0.00 0.00 0.00 1.98
860 915 4.447138 AAGTTTGTTGGGGTCATGTCTA 57.553 40.909 0.00 0.00 0.00 2.59
861 916 3.312736 AAGTTTGTTGGGGTCATGTCT 57.687 42.857 0.00 0.00 0.00 3.41
862 917 4.400529 AAAAGTTTGTTGGGGTCATGTC 57.599 40.909 0.00 0.00 0.00 3.06
863 918 4.835284 AAAAAGTTTGTTGGGGTCATGT 57.165 36.364 0.00 0.00 0.00 3.21
882 937 1.435577 GGCGGACGAAGCTAGAAAAA 58.564 50.000 0.00 0.00 34.52 1.94
883 938 3.132863 GGCGGACGAAGCTAGAAAA 57.867 52.632 0.00 0.00 34.52 2.29
884 939 4.904466 GGCGGACGAAGCTAGAAA 57.096 55.556 0.00 0.00 34.52 2.52
897 952 4.845580 AATGAGCAGCTCCGGCGG 62.846 66.667 22.51 22.51 44.37 6.13
900 955 0.652592 CGTAAAATGAGCAGCTCCGG 59.347 55.000 20.16 0.00 0.00 5.14
954 1009 2.300152 CTGACCAGCACTGAAGTAGGAA 59.700 50.000 0.00 0.00 0.00 3.36
1002 1057 0.673644 ATGCCGTGGTCAAGTGTAGC 60.674 55.000 0.00 0.00 0.00 3.58
1027 1082 1.138266 AGCGTAACCAAGATATGCGGT 59.862 47.619 0.00 0.00 39.66 5.68
1123 1178 2.172483 CTGTACGCCCTGTCCTTGCT 62.172 60.000 0.00 0.00 0.00 3.91
1147 1202 0.669318 GCGACAGGAATCGTGTTGGA 60.669 55.000 20.76 0.00 44.13 3.53
1245 1300 6.238402 CGACGTATGAGAGGAGAAAGACAATA 60.238 42.308 0.00 0.00 0.00 1.90
1365 1420 1.058428 TCATCAGGCATGGGAGGAGG 61.058 60.000 0.00 0.00 32.64 4.30
1368 1423 2.158505 AGAAATCATCAGGCATGGGAGG 60.159 50.000 0.00 0.00 32.64 4.30
1526 1581 7.530863 AGCTAGCTAGTTTGCTTTAAAACATC 58.469 34.615 17.69 0.00 43.74 3.06
1675 1748 5.540337 TGTTTACAGGAGATCTCAACTCAGT 59.460 40.000 23.85 11.57 36.26 3.41
1734 1809 5.560722 TCACTCTGGACATTACCAAAGAA 57.439 39.130 0.00 0.00 39.59 2.52
1761 1836 3.758554 AGGCTACAGTGGCATTTTTACTG 59.241 43.478 11.51 0.00 45.48 2.74
1866 2484 5.257082 ACTTGCTTAACAAACCGTGAAAT 57.743 34.783 0.00 0.00 37.96 2.17
1889 2507 9.856162 TTAGACAGGTTACTTATTCCAAAACTT 57.144 29.630 0.00 0.00 0.00 2.66
1892 2510 9.802039 ACATTAGACAGGTTACTTATTCCAAAA 57.198 29.630 0.00 0.00 0.00 2.44
2164 2787 3.817084 TCCATGCTGTTCAACTTCTCTTG 59.183 43.478 0.00 0.00 0.00 3.02
2201 2824 7.336176 CAGTCATCTTCTTTGGATTCTCATCAA 59.664 37.037 0.00 0.00 0.00 2.57
2266 2890 1.153756 CCAGCCCCCTGTCTTGTTT 59.846 57.895 0.00 0.00 37.38 2.83
2348 2972 5.977725 GCACACATATAACTCACGTGACTAT 59.022 40.000 15.76 15.91 0.00 2.12
2354 2978 2.536365 CGGCACACATATAACTCACGT 58.464 47.619 0.00 0.00 0.00 4.49
2359 2983 5.480422 TGAGATATCCGGCACACATATAACT 59.520 40.000 0.00 0.00 0.00 2.24
2363 2987 3.196469 CCTGAGATATCCGGCACACATAT 59.804 47.826 0.00 0.00 0.00 1.78
2424 3055 4.323417 AGCAACATCCGAAAAGATACACA 58.677 39.130 0.00 0.00 0.00 3.72
2467 3098 0.819666 CCCCCTCTTGAAATAGGCGC 60.820 60.000 0.00 0.00 0.00 6.53
2468 3099 0.819666 GCCCCCTCTTGAAATAGGCG 60.820 60.000 0.00 0.00 0.00 5.52
2486 3117 2.765250 TTCTTCACTCTCCACGCCGC 62.765 60.000 0.00 0.00 0.00 6.53
2558 3207 4.892965 TTTGGTGCTGGCGGTGCT 62.893 61.111 0.00 0.00 0.00 4.40
2566 3215 0.032540 GGCCTCAACTTTTGGTGCTG 59.967 55.000 0.00 0.00 36.98 4.41
2573 3222 2.576615 GACAGACTGGCCTCAACTTTT 58.423 47.619 3.32 0.00 0.00 2.27
2588 3237 2.603473 CACCTGGTCCGGGACAGA 60.603 66.667 27.32 12.98 33.68 3.41
2605 3254 3.289836 GGGGAGAGTTAGAGTAGTCCAC 58.710 54.545 0.00 0.00 0.00 4.02
2635 3291 0.327924 TCCATCCTGCGGTTGACATT 59.672 50.000 7.08 0.00 0.00 2.71
2636 3292 0.548031 ATCCATCCTGCGGTTGACAT 59.452 50.000 7.08 0.00 0.00 3.06
2637 3293 0.392863 CATCCATCCTGCGGTTGACA 60.393 55.000 7.08 0.00 0.00 3.58
2644 3300 1.228033 TCATGGCATCCATCCTGCG 60.228 57.895 0.00 0.00 43.15 5.18
2645 3301 1.524863 GCTCATGGCATCCATCCTGC 61.525 60.000 0.00 0.00 43.15 4.85
2669 3325 2.614057 CAAAATGATAGCCGGAGTCACC 59.386 50.000 5.05 0.00 0.00 4.02
2677 3333 3.804036 TCTACACCCAAAATGATAGCCG 58.196 45.455 0.00 0.00 0.00 5.52
2737 3405 6.053650 TGCACTGATCCAAATCATCTAAGAG 58.946 40.000 0.00 0.00 41.05 2.85
2747 3415 6.239204 CCATACATCATTGCACTGATCCAAAT 60.239 38.462 16.01 5.60 33.59 2.32
2795 3474 2.555757 ACCAAGCAAATGCAGAAGACTC 59.444 45.455 8.28 0.00 45.16 3.36
2796 3475 2.590821 ACCAAGCAAATGCAGAAGACT 58.409 42.857 8.28 0.00 45.16 3.24
2797 3476 3.375782 AACCAAGCAAATGCAGAAGAC 57.624 42.857 8.28 0.00 45.16 3.01
2798 3477 4.022935 CAGTAACCAAGCAAATGCAGAAGA 60.023 41.667 8.28 0.00 45.16 2.87
2799 3478 4.022935 TCAGTAACCAAGCAAATGCAGAAG 60.023 41.667 8.28 0.00 45.16 2.85
2800 3479 3.888323 TCAGTAACCAAGCAAATGCAGAA 59.112 39.130 8.28 0.00 45.16 3.02
2802 3481 3.568538 GTCAGTAACCAAGCAAATGCAG 58.431 45.455 8.28 0.00 45.16 4.41
2803 3482 2.031245 CGTCAGTAACCAAGCAAATGCA 60.031 45.455 8.28 0.00 45.16 3.96
2804 3483 2.584791 CGTCAGTAACCAAGCAAATGC 58.415 47.619 0.00 0.00 42.49 3.56
2805 3484 2.552315 ACCGTCAGTAACCAAGCAAATG 59.448 45.455 0.00 0.00 0.00 2.32
2806 3485 2.552315 CACCGTCAGTAACCAAGCAAAT 59.448 45.455 0.00 0.00 0.00 2.32
2807 3486 1.944024 CACCGTCAGTAACCAAGCAAA 59.056 47.619 0.00 0.00 0.00 3.68
2808 3487 1.588674 CACCGTCAGTAACCAAGCAA 58.411 50.000 0.00 0.00 0.00 3.91
2809 3488 0.882927 GCACCGTCAGTAACCAAGCA 60.883 55.000 0.00 0.00 0.00 3.91
2810 3489 0.602905 AGCACCGTCAGTAACCAAGC 60.603 55.000 0.00 0.00 0.00 4.01
2811 3490 1.878953 AAGCACCGTCAGTAACCAAG 58.121 50.000 0.00 0.00 0.00 3.61
2812 3491 2.868839 GCTAAGCACCGTCAGTAACCAA 60.869 50.000 0.00 0.00 0.00 3.67
2813 3492 1.337447 GCTAAGCACCGTCAGTAACCA 60.337 52.381 0.00 0.00 0.00 3.67
2814 3493 1.356938 GCTAAGCACCGTCAGTAACC 58.643 55.000 0.00 0.00 0.00 2.85
2815 3494 0.989890 CGCTAAGCACCGTCAGTAAC 59.010 55.000 0.00 0.00 0.00 2.50
2816 3495 0.599558 ACGCTAAGCACCGTCAGTAA 59.400 50.000 0.00 0.00 31.00 2.24
2827 3506 1.330829 GCAAATGTAGGGACGCTAAGC 59.669 52.381 0.03 0.00 0.00 3.09
2948 3639 9.924650 AGAAACTCGTACTAGAAAAATACACAT 57.075 29.630 0.69 0.00 0.00 3.21
2959 3650 4.841443 TGCAACAGAAACTCGTACTAGA 57.159 40.909 0.69 0.00 0.00 2.43
2960 3651 4.386049 CCTTGCAACAGAAACTCGTACTAG 59.614 45.833 0.00 0.00 0.00 2.57
3014 3705 7.707464 TCTTCACAGACAAAATTACGACTTACA 59.293 33.333 0.00 0.00 0.00 2.41
3017 3708 7.548196 TTCTTCACAGACAAAATTACGACTT 57.452 32.000 0.00 0.00 0.00 3.01
3073 3764 1.153289 CCCTCAAGCGATCCTGGTG 60.153 63.158 0.00 0.00 0.00 4.17
3137 3830 9.783081 ATAGACATGCAATATACATCAACAAGA 57.217 29.630 0.00 0.00 0.00 3.02
3182 3877 5.059833 CCTCAACTATACATGAAAGGAGCC 58.940 45.833 0.00 0.00 0.00 4.70
3183 3878 5.755861 GTCCTCAACTATACATGAAAGGAGC 59.244 44.000 0.00 0.00 0.00 4.70
3190 3885 3.181479 GCCACGTCCTCAACTATACATGA 60.181 47.826 0.00 0.00 0.00 3.07
3193 3888 1.479323 GGCCACGTCCTCAACTATACA 59.521 52.381 0.00 0.00 0.00 2.29
3205 3900 1.648504 GTACAATAGGTGGCCACGTC 58.351 55.000 32.99 18.75 0.00 4.34
3208 3903 5.757099 ATATAGGTACAATAGGTGGCCAC 57.243 43.478 28.57 28.57 0.00 5.01
3246 3941 1.605753 GCTTTTCCTGTCTTCGGGTT 58.394 50.000 0.00 0.00 40.77 4.11
3253 3948 2.300437 AGCTAGAACGCTTTTCCTGTCT 59.700 45.455 0.00 0.00 36.74 3.41
3263 3958 0.737715 CGGCAGAAAGCTAGAACGCT 60.738 55.000 0.00 0.00 44.79 5.07
3264 3959 1.710339 CGGCAGAAAGCTAGAACGC 59.290 57.895 0.00 0.00 44.79 4.84
3265 3960 0.737715 AGCGGCAGAAAGCTAGAACG 60.738 55.000 1.45 0.00 42.60 3.95
3266 3961 2.295253 TAGCGGCAGAAAGCTAGAAC 57.705 50.000 1.45 0.00 44.15 3.01
3270 3965 0.686441 TCCCTAGCGGCAGAAAGCTA 60.686 55.000 1.45 0.00 44.15 3.32
3271 3966 1.990060 TCCCTAGCGGCAGAAAGCT 60.990 57.895 1.45 0.00 46.53 3.74
3272 3967 1.815840 GTCCCTAGCGGCAGAAAGC 60.816 63.158 1.45 0.00 44.65 3.51
3273 3968 0.179097 GAGTCCCTAGCGGCAGAAAG 60.179 60.000 1.45 0.00 0.00 2.62
3274 3969 1.898154 GAGTCCCTAGCGGCAGAAA 59.102 57.895 1.45 0.00 0.00 2.52
3275 3970 2.415608 CGAGTCCCTAGCGGCAGAA 61.416 63.158 1.45 0.00 0.00 3.02
3276 3971 2.829003 CGAGTCCCTAGCGGCAGA 60.829 66.667 1.45 0.00 0.00 4.26
3277 3972 4.577246 GCGAGTCCCTAGCGGCAG 62.577 72.222 1.45 0.00 0.00 4.85
3282 3977 3.213402 AGAGCGCGAGTCCCTAGC 61.213 66.667 12.10 0.00 0.00 3.42
3283 3978 2.718731 CAGAGCGCGAGTCCCTAG 59.281 66.667 12.10 0.00 0.00 3.02
3284 3979 3.518998 GCAGAGCGCGAGTCCCTA 61.519 66.667 12.10 0.00 0.00 3.53
3315 4010 3.917760 GTCGATGGAGGGGAGCCG 61.918 72.222 0.00 0.00 0.00 5.52
3316 4011 2.367202 TTGTCGATGGAGGGGAGCC 61.367 63.158 0.00 0.00 0.00 4.70
3317 4012 1.153349 GTTGTCGATGGAGGGGAGC 60.153 63.158 0.00 0.00 0.00 4.70
3318 4013 0.978146 AGGTTGTCGATGGAGGGGAG 60.978 60.000 0.00 0.00 0.00 4.30
3319 4014 0.976073 GAGGTTGTCGATGGAGGGGA 60.976 60.000 0.00 0.00 0.00 4.81
3320 4015 1.522569 GAGGTTGTCGATGGAGGGG 59.477 63.158 0.00 0.00 0.00 4.79
3330 4025 1.810030 GCCGATGACCGAGGTTGTC 60.810 63.158 0.00 0.00 41.76 3.18
3331 4026 2.264794 GCCGATGACCGAGGTTGT 59.735 61.111 0.00 0.00 41.76 3.32
3332 4027 1.811266 CTGCCGATGACCGAGGTTG 60.811 63.158 0.00 0.00 41.76 3.77
3333 4028 2.283529 ACTGCCGATGACCGAGGTT 61.284 57.895 0.00 0.00 41.76 3.50
3334 4029 2.680352 ACTGCCGATGACCGAGGT 60.680 61.111 0.00 0.00 41.76 3.85
3335 4030 2.202797 CACTGCCGATGACCGAGG 60.203 66.667 0.00 0.00 41.76 4.63
3336 4031 1.226802 CTCACTGCCGATGACCGAG 60.227 63.158 0.00 0.00 41.76 4.63
3337 4032 2.710902 CCTCACTGCCGATGACCGA 61.711 63.158 0.00 0.00 41.76 4.69
3338 4033 2.202797 CCTCACTGCCGATGACCG 60.203 66.667 0.00 0.00 38.18 4.79
3339 4034 2.187946 CCCTCACTGCCGATGACC 59.812 66.667 0.00 0.00 0.00 4.02
3340 4035 2.187946 CCCCTCACTGCCGATGAC 59.812 66.667 0.00 0.00 0.00 3.06
3341 4036 3.083349 CCCCCTCACTGCCGATGA 61.083 66.667 0.00 0.00 0.00 2.92
3370 4065 3.060363 GTCTAAAACTATCCACACGCGTG 59.940 47.826 35.99 35.99 43.21 5.34
3371 4066 3.248266 GTCTAAAACTATCCACACGCGT 58.752 45.455 5.58 5.58 0.00 6.01
3372 4067 2.601763 GGTCTAAAACTATCCACACGCG 59.398 50.000 3.53 3.53 0.00 6.01
3373 4068 3.592059 TGGTCTAAAACTATCCACACGC 58.408 45.455 0.00 0.00 0.00 5.34
3374 4069 5.699458 AGTTTGGTCTAAAACTATCCACACG 59.301 40.000 0.62 0.00 46.10 4.49
3375 4070 7.148457 GCTAGTTTGGTCTAAAACTATCCACAC 60.148 40.741 9.32 0.00 46.35 3.82
3376 4071 6.877322 GCTAGTTTGGTCTAAAACTATCCACA 59.123 38.462 9.32 0.00 46.35 4.17
3377 4072 7.104290 AGCTAGTTTGGTCTAAAACTATCCAC 58.896 38.462 9.32 2.37 46.35 4.02
3378 4073 7.253905 AGCTAGTTTGGTCTAAAACTATCCA 57.746 36.000 9.32 0.00 46.35 3.41
3379 4074 7.065923 CCAAGCTAGTTTGGTCTAAAACTATCC 59.934 40.741 25.73 5.30 46.35 2.59
3380 4075 7.975750 CCAAGCTAGTTTGGTCTAAAACTATC 58.024 38.462 25.73 6.36 46.35 2.08
3381 4076 7.923414 CCAAGCTAGTTTGGTCTAAAACTAT 57.077 36.000 25.73 0.00 46.35 2.12
3407 4102 3.334583 AGACGATGAGCAGCCTAAAAA 57.665 42.857 0.00 0.00 0.00 1.94
3408 4103 3.002791 CAAGACGATGAGCAGCCTAAAA 58.997 45.455 0.00 0.00 0.00 1.52
3409 4104 2.233676 TCAAGACGATGAGCAGCCTAAA 59.766 45.455 0.00 0.00 0.00 1.85
3410 4105 1.824852 TCAAGACGATGAGCAGCCTAA 59.175 47.619 0.00 0.00 0.00 2.69
3411 4106 1.135139 GTCAAGACGATGAGCAGCCTA 59.865 52.381 0.00 0.00 0.00 3.93
3412 4107 0.108424 GTCAAGACGATGAGCAGCCT 60.108 55.000 0.00 0.00 0.00 4.58
3413 4108 0.108424 AGTCAAGACGATGAGCAGCC 60.108 55.000 0.00 0.00 36.20 4.85
3414 4109 1.658095 GAAGTCAAGACGATGAGCAGC 59.342 52.381 0.00 0.00 36.20 5.25
3415 4110 1.916651 CGAAGTCAAGACGATGAGCAG 59.083 52.381 0.00 0.00 36.20 4.24
3416 4111 1.402852 CCGAAGTCAAGACGATGAGCA 60.403 52.381 0.00 0.00 36.20 4.26
3417 4112 1.272781 CCGAAGTCAAGACGATGAGC 58.727 55.000 0.00 0.00 36.20 4.26
3418 4113 2.254459 CACCGAAGTCAAGACGATGAG 58.746 52.381 0.00 0.00 36.20 2.90
3419 4114 1.067846 CCACCGAAGTCAAGACGATGA 60.068 52.381 0.00 0.00 36.20 2.92
3420 4115 1.350193 CCACCGAAGTCAAGACGATG 58.650 55.000 0.00 0.00 36.20 3.84
3421 4116 0.389948 GCCACCGAAGTCAAGACGAT 60.390 55.000 0.00 0.00 36.20 3.73
3422 4117 1.006571 GCCACCGAAGTCAAGACGA 60.007 57.895 0.00 0.00 36.20 4.20
3423 4118 1.300620 TGCCACCGAAGTCAAGACG 60.301 57.895 0.00 0.00 36.20 4.18
3424 4119 0.249911 AGTGCCACCGAAGTCAAGAC 60.250 55.000 0.00 0.00 0.00 3.01
3425 4120 0.249868 CAGTGCCACCGAAGTCAAGA 60.250 55.000 0.00 0.00 0.00 3.02
3426 4121 0.249868 TCAGTGCCACCGAAGTCAAG 60.250 55.000 0.00 0.00 0.00 3.02
3427 4122 0.179234 TTCAGTGCCACCGAAGTCAA 59.821 50.000 0.00 0.00 0.00 3.18
3428 4123 0.396435 ATTCAGTGCCACCGAAGTCA 59.604 50.000 0.00 0.00 0.00 3.41
3429 4124 2.380084 TATTCAGTGCCACCGAAGTC 57.620 50.000 0.00 0.00 0.00 3.01
3430 4125 2.851263 TTATTCAGTGCCACCGAAGT 57.149 45.000 0.00 0.00 0.00 3.01
3431 4126 4.701956 ATTTTATTCAGTGCCACCGAAG 57.298 40.909 0.00 0.00 0.00 3.79
3432 4127 5.242838 AGAAATTTTATTCAGTGCCACCGAA 59.757 36.000 0.00 0.00 0.00 4.30
3433 4128 4.764823 AGAAATTTTATTCAGTGCCACCGA 59.235 37.500 0.00 0.00 0.00 4.69
3434 4129 5.059404 AGAAATTTTATTCAGTGCCACCG 57.941 39.130 0.00 0.00 0.00 4.94
3435 4130 6.454795 TGAAGAAATTTTATTCAGTGCCACC 58.545 36.000 13.65 0.00 0.00 4.61
3436 4131 7.370383 TCTGAAGAAATTTTATTCAGTGCCAC 58.630 34.615 30.71 4.31 46.43 5.01
3437 4132 7.523293 TCTGAAGAAATTTTATTCAGTGCCA 57.477 32.000 30.71 17.90 46.43 4.92
3438 4133 7.704047 GGATCTGAAGAAATTTTATTCAGTGCC 59.296 37.037 30.71 27.93 46.43 5.01
3439 4134 8.465201 AGGATCTGAAGAAATTTTATTCAGTGC 58.535 33.333 30.71 24.87 46.43 4.40
3445 4140 9.331282 CGGAGTAGGATCTGAAGAAATTTTATT 57.669 33.333 0.00 0.00 0.00 1.40
3446 4141 8.705594 TCGGAGTAGGATCTGAAGAAATTTTAT 58.294 33.333 0.00 0.00 31.58 1.40
3447 4142 8.074613 TCGGAGTAGGATCTGAAGAAATTTTA 57.925 34.615 0.00 0.00 31.58 1.52
3448 4143 6.947464 TCGGAGTAGGATCTGAAGAAATTTT 58.053 36.000 0.00 0.00 31.58 1.82
3449 4144 6.546428 TCGGAGTAGGATCTGAAGAAATTT 57.454 37.500 0.00 0.00 31.58 1.82
3450 4145 6.325028 TCATCGGAGTAGGATCTGAAGAAATT 59.675 38.462 0.00 0.00 38.09 1.82
3451 4146 5.835819 TCATCGGAGTAGGATCTGAAGAAAT 59.164 40.000 0.00 0.00 38.09 2.17
3452 4147 5.067936 GTCATCGGAGTAGGATCTGAAGAAA 59.932 44.000 0.00 0.00 38.09 2.52
3453 4148 4.580995 GTCATCGGAGTAGGATCTGAAGAA 59.419 45.833 0.00 0.00 38.09 2.52
3454 4149 4.138290 GTCATCGGAGTAGGATCTGAAGA 58.862 47.826 0.00 0.00 38.09 2.87
3455 4150 3.058570 CGTCATCGGAGTAGGATCTGAAG 60.059 52.174 0.00 0.00 38.09 3.02
3456 4151 2.879026 CGTCATCGGAGTAGGATCTGAA 59.121 50.000 0.00 0.00 38.09 3.02
3457 4152 2.104281 TCGTCATCGGAGTAGGATCTGA 59.896 50.000 0.00 0.00 38.90 3.27
3458 4153 2.495084 TCGTCATCGGAGTAGGATCTG 58.505 52.381 0.00 0.00 37.69 2.90
3459 4154 2.932855 TCGTCATCGGAGTAGGATCT 57.067 50.000 0.00 0.00 37.69 2.75
3460 4155 3.366476 CCAATCGTCATCGGAGTAGGATC 60.366 52.174 0.00 0.00 37.69 3.36
3461 4156 2.558795 CCAATCGTCATCGGAGTAGGAT 59.441 50.000 0.00 0.00 37.69 3.24
3462 4157 1.954382 CCAATCGTCATCGGAGTAGGA 59.046 52.381 0.00 0.00 37.69 2.94
3463 4158 1.603172 GCCAATCGTCATCGGAGTAGG 60.603 57.143 0.00 0.00 37.69 3.18
3464 4159 1.338337 AGCCAATCGTCATCGGAGTAG 59.662 52.381 0.00 0.00 37.69 2.57
3465 4160 1.337071 GAGCCAATCGTCATCGGAGTA 59.663 52.381 0.00 0.00 37.69 2.59
3466 4161 0.103208 GAGCCAATCGTCATCGGAGT 59.897 55.000 0.00 0.00 37.69 3.85
3467 4162 0.387202 AGAGCCAATCGTCATCGGAG 59.613 55.000 0.00 0.00 37.69 4.63
3468 4163 1.337071 GTAGAGCCAATCGTCATCGGA 59.663 52.381 0.00 0.00 37.69 4.55
3469 4164 1.603172 GGTAGAGCCAATCGTCATCGG 60.603 57.143 0.00 0.00 37.17 4.18
3470 4165 1.772182 GGTAGAGCCAATCGTCATCG 58.228 55.000 0.00 0.00 37.17 3.84
3471 4166 1.067212 ACGGTAGAGCCAATCGTCATC 59.933 52.381 0.00 0.00 36.97 2.92
3472 4167 1.112113 ACGGTAGAGCCAATCGTCAT 58.888 50.000 0.00 0.00 36.97 3.06
3473 4168 0.892755 AACGGTAGAGCCAATCGTCA 59.107 50.000 0.00 0.00 36.97 4.35
3474 4169 1.278238 CAACGGTAGAGCCAATCGTC 58.722 55.000 0.00 0.00 36.97 4.20
3475 4170 0.108329 CCAACGGTAGAGCCAATCGT 60.108 55.000 0.00 0.00 36.97 3.73
3476 4171 0.810031 CCCAACGGTAGAGCCAATCG 60.810 60.000 0.00 0.00 36.97 3.34
3477 4172 0.463833 CCCCAACGGTAGAGCCAATC 60.464 60.000 0.00 0.00 36.97 2.67
3478 4173 0.912487 TCCCCAACGGTAGAGCCAAT 60.912 55.000 0.00 0.00 36.97 3.16
3479 4174 0.912487 ATCCCCAACGGTAGAGCCAA 60.912 55.000 0.00 0.00 36.97 4.52
3480 4175 1.306654 ATCCCCAACGGTAGAGCCA 60.307 57.895 0.00 0.00 36.97 4.75
3481 4176 1.146263 CATCCCCAACGGTAGAGCC 59.854 63.158 0.00 0.00 0.00 4.70
3482 4177 0.539986 TTCATCCCCAACGGTAGAGC 59.460 55.000 0.00 0.00 0.00 4.09
3483 4178 3.560636 AATTCATCCCCAACGGTAGAG 57.439 47.619 0.00 0.00 0.00 2.43
3484 4179 3.616219 CAAATTCATCCCCAACGGTAGA 58.384 45.455 0.00 0.00 0.00 2.59
3485 4180 2.687935 CCAAATTCATCCCCAACGGTAG 59.312 50.000 0.00 0.00 0.00 3.18
3486 4181 2.309162 TCCAAATTCATCCCCAACGGTA 59.691 45.455 0.00 0.00 0.00 4.02
3487 4182 1.076350 TCCAAATTCATCCCCAACGGT 59.924 47.619 0.00 0.00 0.00 4.83
3488 4183 1.846007 TCCAAATTCATCCCCAACGG 58.154 50.000 0.00 0.00 0.00 4.44
3489 4184 3.181476 GGATTCCAAATTCATCCCCAACG 60.181 47.826 0.00 0.00 31.66 4.10
3490 4185 3.774216 TGGATTCCAAATTCATCCCCAAC 59.226 43.478 1.94 0.00 36.38 3.77
3491 4186 4.032310 CTGGATTCCAAATTCATCCCCAA 58.968 43.478 6.88 0.00 36.38 4.12
3492 4187 3.012730 ACTGGATTCCAAATTCATCCCCA 59.987 43.478 6.88 0.00 36.38 4.96
3493 4188 3.638627 GACTGGATTCCAAATTCATCCCC 59.361 47.826 6.88 0.00 36.38 4.81
3494 4189 4.540715 AGACTGGATTCCAAATTCATCCC 58.459 43.478 6.88 0.00 36.38 3.85
3495 4190 7.503566 TGAATAGACTGGATTCCAAATTCATCC 59.496 37.037 18.88 2.63 37.57 3.51
3496 4191 8.455903 TGAATAGACTGGATTCCAAATTCATC 57.544 34.615 18.88 10.82 33.18 2.92
3497 4192 8.689972 GTTGAATAGACTGGATTCCAAATTCAT 58.310 33.333 21.21 6.84 33.14 2.57
3498 4193 7.122650 GGTTGAATAGACTGGATTCCAAATTCA 59.877 37.037 18.88 18.88 33.18 2.57
3499 4194 7.122650 TGGTTGAATAGACTGGATTCCAAATTC 59.877 37.037 6.88 12.81 33.18 2.17
3500 4195 6.953520 TGGTTGAATAGACTGGATTCCAAATT 59.046 34.615 6.88 4.68 33.18 1.82
3501 4196 6.493166 TGGTTGAATAGACTGGATTCCAAAT 58.507 36.000 6.88 0.00 33.18 2.32
3502 4197 5.886609 TGGTTGAATAGACTGGATTCCAAA 58.113 37.500 6.88 0.00 33.18 3.28
3503 4198 5.512942 TGGTTGAATAGACTGGATTCCAA 57.487 39.130 6.88 0.00 33.18 3.53
3504 4199 5.500234 CTTGGTTGAATAGACTGGATTCCA 58.500 41.667 5.05 5.05 33.18 3.53
3505 4200 4.884164 CCTTGGTTGAATAGACTGGATTCC 59.116 45.833 0.00 0.00 33.18 3.01
3506 4201 5.745227 TCCTTGGTTGAATAGACTGGATTC 58.255 41.667 0.00 0.00 34.48 2.52
3507 4202 5.779241 TCCTTGGTTGAATAGACTGGATT 57.221 39.130 0.00 0.00 0.00 3.01
3508 4203 5.398353 CCATCCTTGGTTGAATAGACTGGAT 60.398 44.000 0.00 0.00 38.30 3.41
3509 4204 4.080356 CCATCCTTGGTTGAATAGACTGGA 60.080 45.833 0.00 0.00 38.30 3.86
3510 4205 4.202441 CCATCCTTGGTTGAATAGACTGG 58.798 47.826 0.00 0.00 38.30 4.00
3524 4219 2.360350 AGCGCCACACCATCCTTG 60.360 61.111 2.29 0.00 0.00 3.61
3525 4220 2.360350 CAGCGCCACACCATCCTT 60.360 61.111 2.29 0.00 0.00 3.36
3526 4221 4.415150 CCAGCGCCACACCATCCT 62.415 66.667 2.29 0.00 0.00 3.24
3549 4244 2.747460 CACATGCCCACCACGAGG 60.747 66.667 0.00 0.00 42.21 4.63
3550 4245 2.032528 ACACATGCCCACCACGAG 59.967 61.111 0.00 0.00 0.00 4.18
3551 4246 2.031919 GACACATGCCCACCACGA 59.968 61.111 0.00 0.00 0.00 4.35
3552 4247 3.055719 GGACACATGCCCACCACG 61.056 66.667 0.00 0.00 0.00 4.94
3553 4248 1.675641 GAGGACACATGCCCACCAC 60.676 63.158 0.00 0.00 0.00 4.16
3554 4249 2.128290 CTGAGGACACATGCCCACCA 62.128 60.000 0.00 0.00 0.00 4.17
3555 4250 1.377725 CTGAGGACACATGCCCACC 60.378 63.158 0.00 0.00 0.00 4.61
3556 4251 1.377725 CCTGAGGACACATGCCCAC 60.378 63.158 0.00 0.00 0.00 4.61
3557 4252 3.080641 CCTGAGGACACATGCCCA 58.919 61.111 0.00 0.00 0.00 5.36
3558 4253 2.439156 GCCTGAGGACACATGCCC 60.439 66.667 0.65 0.00 0.00 5.36
3559 4254 1.451028 GAGCCTGAGGACACATGCC 60.451 63.158 0.65 0.00 33.21 4.40
3560 4255 1.451028 GGAGCCTGAGGACACATGC 60.451 63.158 0.65 0.00 0.00 4.06
3561 4256 1.153489 CGGAGCCTGAGGACACATG 60.153 63.158 0.65 0.00 0.00 3.21
3562 4257 3.303189 CGGAGCCTGAGGACACAT 58.697 61.111 0.65 0.00 0.00 3.21
3579 4274 3.186047 ATACGCCGTCGCAACAGC 61.186 61.111 0.00 0.00 39.84 4.40
3580 4275 2.695055 CATACGCCGTCGCAACAG 59.305 61.111 0.00 0.00 39.84 3.16
3581 4276 3.483665 GCATACGCCGTCGCAACA 61.484 61.111 0.00 0.00 39.84 3.33
3582 4277 3.139118 GAGCATACGCCGTCGCAAC 62.139 63.158 13.17 4.28 39.83 4.17
3583 4278 2.883730 GAGCATACGCCGTCGCAA 60.884 61.111 13.17 0.00 39.83 4.85
3584 4279 4.865761 GGAGCATACGCCGTCGCA 62.866 66.667 13.17 0.00 39.83 5.10
3585 4280 4.865761 TGGAGCATACGCCGTCGC 62.866 66.667 0.00 0.00 38.90 5.19
3586 4281 2.655364 CTGGAGCATACGCCGTCG 60.655 66.667 0.00 0.00 38.90 5.12
3587 4282 2.962253 GCTGGAGCATACGCCGTC 60.962 66.667 0.00 0.00 38.90 4.79
3588 4283 4.873129 CGCTGGAGCATACGCCGT 62.873 66.667 0.00 0.00 42.21 5.68
3589 4284 4.873129 ACGCTGGAGCATACGCCG 62.873 66.667 0.00 0.00 42.21 6.46
3590 4285 2.962253 GACGCTGGAGCATACGCC 60.962 66.667 0.00 0.00 42.21 5.68
3591 4286 3.323136 CGACGCTGGAGCATACGC 61.323 66.667 0.00 0.00 42.21 4.42
3592 4287 2.655364 CCGACGCTGGAGCATACG 60.655 66.667 0.00 1.42 42.21 3.06
3593 4288 2.962253 GCCGACGCTGGAGCATAC 60.962 66.667 0.00 0.00 42.21 2.39
3594 4289 3.457263 TGCCGACGCTGGAGCATA 61.457 61.111 0.00 0.00 42.21 3.14
3608 4303 4.785453 CCTCCCAAGCTCCGTGCC 62.785 72.222 0.00 0.00 44.23 5.01
3609 4304 2.579684 CTACCTCCCAAGCTCCGTGC 62.580 65.000 0.00 0.00 43.29 5.34
3610 4305 1.258445 ACTACCTCCCAAGCTCCGTG 61.258 60.000 0.00 0.00 0.00 4.94
3611 4306 0.971447 GACTACCTCCCAAGCTCCGT 60.971 60.000 0.00 0.00 0.00 4.69
3612 4307 0.684805 AGACTACCTCCCAAGCTCCG 60.685 60.000 0.00 0.00 0.00 4.63
3613 4308 2.312390 CTAGACTACCTCCCAAGCTCC 58.688 57.143 0.00 0.00 0.00 4.70
3614 4309 2.091775 TCCTAGACTACCTCCCAAGCTC 60.092 54.545 0.00 0.00 0.00 4.09
3615 4310 1.930914 TCCTAGACTACCTCCCAAGCT 59.069 52.381 0.00 0.00 0.00 3.74
3616 4311 2.312390 CTCCTAGACTACCTCCCAAGC 58.688 57.143 0.00 0.00 0.00 4.01
3617 4312 2.312390 GCTCCTAGACTACCTCCCAAG 58.688 57.143 0.00 0.00 0.00 3.61
3618 4313 1.409802 CGCTCCTAGACTACCTCCCAA 60.410 57.143 0.00 0.00 0.00 4.12
3619 4314 0.183014 CGCTCCTAGACTACCTCCCA 59.817 60.000 0.00 0.00 0.00 4.37
3620 4315 0.473326 TCGCTCCTAGACTACCTCCC 59.527 60.000 0.00 0.00 0.00 4.30
3621 4316 2.345124 TTCGCTCCTAGACTACCTCC 57.655 55.000 0.00 0.00 0.00 4.30
3622 4317 2.030628 GCATTCGCTCCTAGACTACCTC 60.031 54.545 0.00 0.00 34.30 3.85
3623 4318 1.957877 GCATTCGCTCCTAGACTACCT 59.042 52.381 0.00 0.00 34.30 3.08
3624 4319 1.681793 TGCATTCGCTCCTAGACTACC 59.318 52.381 0.00 0.00 39.64 3.18
3625 4320 2.619177 TCTGCATTCGCTCCTAGACTAC 59.381 50.000 0.00 0.00 39.64 2.73
3626 4321 2.932261 TCTGCATTCGCTCCTAGACTA 58.068 47.619 0.00 0.00 39.64 2.59
3627 4322 1.769026 TCTGCATTCGCTCCTAGACT 58.231 50.000 0.00 0.00 39.64 3.24
3628 4323 2.799412 CAATCTGCATTCGCTCCTAGAC 59.201 50.000 0.00 0.00 39.64 2.59
3629 4324 2.432146 ACAATCTGCATTCGCTCCTAGA 59.568 45.455 0.00 0.00 39.64 2.43
3630 4325 2.543012 CACAATCTGCATTCGCTCCTAG 59.457 50.000 0.00 0.00 39.64 3.02
3631 4326 2.554142 CACAATCTGCATTCGCTCCTA 58.446 47.619 0.00 0.00 39.64 2.94
3632 4327 1.376543 CACAATCTGCATTCGCTCCT 58.623 50.000 0.00 0.00 39.64 3.69
3633 4328 0.379669 CCACAATCTGCATTCGCTCC 59.620 55.000 0.00 0.00 39.64 4.70
3634 4329 1.063174 GACCACAATCTGCATTCGCTC 59.937 52.381 0.00 0.00 39.64 5.03
3635 4330 1.089920 GACCACAATCTGCATTCGCT 58.910 50.000 0.00 0.00 39.64 4.93
3636 4331 1.089920 AGACCACAATCTGCATTCGC 58.910 50.000 0.00 0.00 39.24 4.70
3637 4332 2.819422 CAGACCACAATCTGCATTCG 57.181 50.000 0.00 0.00 39.77 3.34
3644 4339 1.335964 CGTCGACACAGACCACAATCT 60.336 52.381 17.16 0.00 37.85 2.40
3645 4340 1.060713 CGTCGACACAGACCACAATC 58.939 55.000 17.16 0.00 37.85 2.67
3646 4341 0.671796 TCGTCGACACAGACCACAAT 59.328 50.000 17.16 0.00 37.85 2.71
3647 4342 0.248743 GTCGTCGACACAGACCACAA 60.249 55.000 20.28 0.00 37.85 3.33
3648 4343 1.099295 AGTCGTCGACACAGACCACA 61.099 55.000 26.17 0.00 35.23 4.17
3649 4344 0.030369 AAGTCGTCGACACAGACCAC 59.970 55.000 26.17 0.00 37.85 4.16
3650 4345 0.309922 GAAGTCGTCGACACAGACCA 59.690 55.000 26.17 0.00 37.85 4.02
3651 4346 0.592148 AGAAGTCGTCGACACAGACC 59.408 55.000 26.17 8.87 37.85 3.85
3652 4347 3.532892 TTAGAAGTCGTCGACACAGAC 57.467 47.619 26.17 14.48 34.60 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.