Multiple sequence alignment - TraesCS7B01G098700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G098700 chr7B 100.000 5998 0 0 1 5998 113203144 113197147 0.000000e+00 11077.0
1 TraesCS7B01G098700 chr7D 92.025 1768 82 28 1519 3270 151321488 151319764 0.000000e+00 2429.0
2 TraesCS7B01G098700 chr7D 92.210 1412 74 16 1 1405 151323008 151321626 0.000000e+00 1965.0
3 TraesCS7B01G098700 chr7D 95.270 888 37 4 3361 4246 151319764 151318880 0.000000e+00 1402.0
4 TraesCS7B01G098700 chr7D 89.816 923 77 8 4243 5163 151318794 151317887 0.000000e+00 1168.0
5 TraesCS7B01G098700 chr7D 91.139 553 37 8 5450 5998 151317685 151317141 0.000000e+00 739.0
6 TraesCS7B01G098700 chr7A 90.134 1794 116 21 1491 3266 150993103 150991353 0.000000e+00 2276.0
7 TraesCS7B01G098700 chr7A 87.395 1904 154 38 3364 5254 150991349 150989519 0.000000e+00 2108.0
8 TraesCS7B01G098700 chr7A 88.849 1390 91 27 69 1419 150994568 150993204 0.000000e+00 1650.0
9 TraesCS7B01G098700 chr7A 90.254 472 31 6 5540 5998 150989405 150988936 2.390000e-168 603.0
10 TraesCS7B01G098700 chr2B 95.238 105 4 1 3261 3364 705906526 705906630 1.340000e-36 165.0
11 TraesCS7B01G098700 chr4B 95.876 97 3 1 3269 3364 621424696 621424792 8.050000e-34 156.0
12 TraesCS7B01G098700 chr2D 95.876 97 3 1 3269 3364 445894884 445894980 8.050000e-34 156.0
13 TraesCS7B01G098700 chr2D 91.667 108 6 3 3268 3374 474089084 474088979 4.840000e-31 147.0
14 TraesCS7B01G098700 chr1B 95.000 100 4 1 3269 3367 527452322 527452421 8.050000e-34 156.0
15 TraesCS7B01G098700 chr1B 90.909 110 9 1 3265 3373 377009470 377009361 4.840000e-31 147.0
16 TraesCS7B01G098700 chr4D 94.949 99 4 1 3269 3366 12354794 12354696 2.890000e-33 154.0
17 TraesCS7B01G098700 chr1D 94.949 99 4 1 3269 3366 220408740 220408838 2.890000e-33 154.0
18 TraesCS7B01G098700 chr5D 93.069 101 6 1 3269 3368 526139177 526139277 4.840000e-31 147.0
19 TraesCS7B01G098700 chr6B 97.297 37 1 0 5331 5367 36358755 36358719 5.020000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G098700 chr7B 113197147 113203144 5997 True 11077.00 11077 100.000 1 5998 1 chr7B.!!$R1 5997
1 TraesCS7B01G098700 chr7D 151317141 151323008 5867 True 1540.60 2429 92.092 1 5998 5 chr7D.!!$R1 5997
2 TraesCS7B01G098700 chr7A 150988936 150994568 5632 True 1659.25 2276 89.158 69 5998 4 chr7A.!!$R1 5929

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 236 0.249238 CAGAGGATAGCACGGCTGTC 60.249 60.000 12.15 12.15 44.21 3.51 F
1186 1232 1.006688 GTTTTTGGATTGCGGCGGT 60.007 52.632 9.78 0.00 0.00 5.68 F
1580 1674 0.179062 CCTTCGATTGGCTGGAGGAG 60.179 60.000 0.00 0.00 0.00 3.69 F
3281 3418 0.108281 GTTTGCTACTCCCTCCGTCC 60.108 60.000 0.00 0.00 0.00 4.79 F
3359 3496 0.251073 ACGTATTTTGGGACGGAGGG 59.749 55.000 0.00 0.00 43.32 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1443 1490 0.032540 GTGCAAGCCTTTGGGAACTG 59.967 55.0 0.0 0.0 34.79 3.16 R
2186 2294 2.355010 ATGAGATAAAGCCCAGCACC 57.645 50.0 0.0 0.0 0.00 5.01 R
3340 3477 0.251073 CCCTCCGTCCCAAAATACGT 59.749 55.0 0.0 0.0 37.40 3.57 R
4524 4756 0.438830 GACGCCGACATGAAGTGAAC 59.561 55.0 0.0 0.0 0.00 3.18 R
5284 5561 0.462759 ATACTCCTGCTTTCGCCTGC 60.463 55.0 0.0 0.0 34.43 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.393800 CTGAACCATCAAACGACAGAGT 58.606 45.455 0.00 0.00 34.49 3.24
46 47 3.993081 GAGTGGATCTTGATAAGCCATCG 59.007 47.826 0.00 0.00 36.33 3.84
57 58 1.743996 AAGCCATCGGAGAAAGAAGC 58.256 50.000 0.00 0.00 43.58 3.86
123 127 1.691976 AGTCACCGACAAACCATCAGA 59.308 47.619 0.00 0.00 34.60 3.27
130 134 2.996621 CGACAAACCATCAGAGGAAGAC 59.003 50.000 0.00 0.00 0.00 3.01
196 200 2.763448 ACCATCGGAGGAGAAAGAAGAG 59.237 50.000 0.93 0.00 0.00 2.85
230 234 0.678395 ATCAGAGGATAGCACGGCTG 59.322 55.000 8.44 0.00 40.10 4.85
232 236 0.249238 CAGAGGATAGCACGGCTGTC 60.249 60.000 12.15 12.15 44.21 3.51
334 338 2.887568 GAGGCACCATCGCACGAG 60.888 66.667 0.00 0.00 0.00 4.18
363 367 2.203437 GGCCACCGACAAACCCTT 60.203 61.111 0.00 0.00 0.00 3.95
378 382 1.073722 CCTTGCCTGCCACAGAGAA 59.926 57.895 0.00 0.00 32.44 2.87
389 393 4.507710 TGCCACAGAGAAGAACATATCAC 58.492 43.478 0.00 0.00 0.00 3.06
408 412 2.583441 CCTGAGCTCACCGGGACAA 61.583 63.158 13.74 0.00 31.68 3.18
468 481 4.042435 AGTTTTTAACCGGGAGAAGGATCA 59.958 41.667 6.32 0.00 0.00 2.92
528 546 3.797451 TTTGTCTGTGCAATGCTTGAA 57.203 38.095 6.82 0.00 0.00 2.69
547 565 6.519891 GCTTGAATTGTAAAATTTGAGGGGGA 60.520 38.462 0.00 0.00 0.00 4.81
551 569 7.936301 TGAATTGTAAAATTTGAGGGGGAAAAG 59.064 33.333 0.00 0.00 0.00 2.27
580 602 7.803131 AGAAGGATAGGGTATTTACTTGGTTC 58.197 38.462 0.00 0.00 0.00 3.62
587 609 4.698780 GGGTATTTACTTGGTTCACTCACC 59.301 45.833 0.00 0.00 37.34 4.02
691 715 2.094286 TGTGGTTTGGTTTGTTGCTCAG 60.094 45.455 0.00 0.00 0.00 3.35
783 808 3.057315 GCTGTTTCAGAATTGCTTGCCTA 60.057 43.478 0.66 0.00 32.44 3.93
894 924 5.418524 AGATGTGCTGTGGCTAGATAGATAG 59.581 44.000 0.00 0.00 39.59 2.08
897 927 5.473846 TGTGCTGTGGCTAGATAGATAGTAC 59.526 44.000 0.00 0.00 39.59 2.73
898 928 5.708230 GTGCTGTGGCTAGATAGATAGTACT 59.292 44.000 0.00 0.00 39.59 2.73
899 929 5.941058 TGCTGTGGCTAGATAGATAGTACTC 59.059 44.000 0.00 0.00 39.59 2.59
972 1004 3.052414 ACCTAAAACCTCAAAACCCCAGT 60.052 43.478 0.00 0.00 0.00 4.00
1077 1122 1.514443 CGTCTCCGCCTTCTTCGTC 60.514 63.158 0.00 0.00 0.00 4.20
1164 1210 2.530460 TGCCTCCCATTTGTGCTTAT 57.470 45.000 0.00 0.00 0.00 1.73
1165 1211 2.818921 TGCCTCCCATTTGTGCTTATT 58.181 42.857 0.00 0.00 0.00 1.40
1166 1212 3.974719 TGCCTCCCATTTGTGCTTATTA 58.025 40.909 0.00 0.00 0.00 0.98
1167 1213 3.953612 TGCCTCCCATTTGTGCTTATTAG 59.046 43.478 0.00 0.00 0.00 1.73
1168 1214 3.319122 GCCTCCCATTTGTGCTTATTAGG 59.681 47.826 0.00 0.00 0.00 2.69
1186 1232 1.006688 GTTTTTGGATTGCGGCGGT 60.007 52.632 9.78 0.00 0.00 5.68
1187 1233 1.006805 TTTTTGGATTGCGGCGGTG 60.007 52.632 9.78 0.00 0.00 4.94
1188 1234 2.427540 TTTTTGGATTGCGGCGGTGG 62.428 55.000 9.78 0.00 0.00 4.61
1250 1297 2.184579 GGAGAAGAAGGACGCCGG 59.815 66.667 0.00 0.00 0.00 6.13
1339 1386 1.301716 GACTGGCTTCACCGCTTCA 60.302 57.895 0.00 0.00 43.94 3.02
1405 1452 4.815846 CCGTAGAACCCTAGTCTCTCTTAC 59.184 50.000 0.00 0.00 0.00 2.34
1407 1454 4.254039 AGAACCCTAGTCTCTCTTACCC 57.746 50.000 0.00 0.00 0.00 3.69
1408 1455 3.859859 AGAACCCTAGTCTCTCTTACCCT 59.140 47.826 0.00 0.00 0.00 4.34
1409 1456 3.957508 ACCCTAGTCTCTCTTACCCTC 57.042 52.381 0.00 0.00 0.00 4.30
1410 1457 2.515005 ACCCTAGTCTCTCTTACCCTCC 59.485 54.545 0.00 0.00 0.00 4.30
1411 1458 2.158430 CCCTAGTCTCTCTTACCCTCCC 60.158 59.091 0.00 0.00 0.00 4.30
1412 1459 2.158430 CCTAGTCTCTCTTACCCTCCCC 60.158 59.091 0.00 0.00 0.00 4.81
1413 1460 1.701422 AGTCTCTCTTACCCTCCCCT 58.299 55.000 0.00 0.00 0.00 4.79
1414 1461 2.874447 AGTCTCTCTTACCCTCCCCTA 58.126 52.381 0.00 0.00 0.00 3.53
1415 1462 2.787035 AGTCTCTCTTACCCTCCCCTAG 59.213 54.545 0.00 0.00 0.00 3.02
1417 1464 2.514582 TCTCTCTTACCCTCCCCTAGTG 59.485 54.545 0.00 0.00 0.00 2.74
1420 1467 1.123928 CTTACCCTCCCCTAGTGCTG 58.876 60.000 0.00 0.00 0.00 4.41
1423 1470 1.613630 CCCTCCCCTAGTGCTGTGT 60.614 63.158 0.00 0.00 0.00 3.72
1443 1490 1.752498 TGCAATCCCACATCTGCATTC 59.248 47.619 0.00 0.00 39.77 2.67
1446 1493 3.021695 CAATCCCACATCTGCATTCAGT 58.978 45.455 0.00 0.00 41.10 3.41
1449 1496 1.747355 CCCACATCTGCATTCAGTTCC 59.253 52.381 0.00 0.00 41.10 3.62
1450 1497 1.747355 CCACATCTGCATTCAGTTCCC 59.253 52.381 0.00 0.00 41.10 3.97
1463 1535 1.115326 AGTTCCCAAAGGCTTGCACC 61.115 55.000 0.00 0.00 0.00 5.01
1481 1553 0.532115 CCTGCCAAAGTAATGTGGGC 59.468 55.000 0.71 0.00 44.82 5.36
1489 1561 4.871557 CCAAAGTAATGTGGGCATCAAATG 59.128 41.667 0.00 0.00 33.50 2.32
1503 1597 4.767478 CATCAAATGAGCCTTCTGAGAGA 58.233 43.478 0.00 0.00 0.00 3.10
1509 1603 2.303890 TGAGCCTTCTGAGAGATTGCAA 59.696 45.455 0.00 0.00 0.00 4.08
1580 1674 0.179062 CCTTCGATTGGCTGGAGGAG 60.179 60.000 0.00 0.00 0.00 3.69
1685 1788 3.430862 GGCGCGTCAAATCCTGCA 61.431 61.111 5.47 0.00 0.00 4.41
1720 1823 1.885887 GTCATCCGAGGATCCTGAGAG 59.114 57.143 22.02 8.34 31.62 3.20
1729 1832 2.235898 AGGATCCTGAGAGTCACAAAGC 59.764 50.000 15.29 0.00 0.00 3.51
1732 1835 3.777106 TCCTGAGAGTCACAAAGCAAT 57.223 42.857 0.00 0.00 0.00 3.56
1742 1845 5.072741 AGTCACAAAGCAATTAGTGGACAT 58.927 37.500 0.00 0.00 33.01 3.06
1752 1855 3.931907 TTAGTGGACATGATGGGAAGG 57.068 47.619 0.00 0.00 0.00 3.46
1874 1977 3.933239 AGCTCTGGGGATACTAAGGAT 57.067 47.619 0.00 0.00 0.00 3.24
1930 2036 2.427095 GACCTGATAAACCAATGTGCCC 59.573 50.000 0.00 0.00 0.00 5.36
1931 2037 2.042979 ACCTGATAAACCAATGTGCCCT 59.957 45.455 0.00 0.00 0.00 5.19
2163 2269 5.875224 TCAAGTTTTCATCCATGGAGTGTA 58.125 37.500 21.33 9.55 0.00 2.90
2186 2294 4.806247 ACACTTGAAAGTCTTCACTTCTCG 59.194 41.667 0.00 0.00 42.45 4.04
2221 2330 4.214986 TCTCATTTTTGCATAGACGGGA 57.785 40.909 0.00 0.00 0.00 5.14
2310 2419 1.293062 ATGCTCCACCAGACCTCAAT 58.707 50.000 0.00 0.00 0.00 2.57
2377 2486 7.907214 AGAGGTAAAGTACATTGACACATTC 57.093 36.000 0.00 0.00 0.00 2.67
2383 2492 6.882610 AAGTACATTGACACATTCACACAT 57.117 33.333 0.00 0.00 32.26 3.21
2388 2497 6.437928 ACATTGACACATTCACACATTGTAC 58.562 36.000 0.00 0.00 32.26 2.90
2390 2499 6.691754 TTGACACATTCACACATTGTACTT 57.308 33.333 0.00 0.00 32.26 2.24
2424 2533 4.989797 TCATCATTTGGTTGATTGTTGTGC 59.010 37.500 0.00 0.00 34.09 4.57
2724 2855 5.803020 AGATGAACTTATTGTCTTTCCGC 57.197 39.130 0.00 0.00 0.00 5.54
2725 2856 5.245531 AGATGAACTTATTGTCTTTCCGCA 58.754 37.500 0.00 0.00 0.00 5.69
2726 2857 5.705441 AGATGAACTTATTGTCTTTCCGCAA 59.295 36.000 0.00 0.00 0.00 4.85
2727 2858 5.759506 TGAACTTATTGTCTTTCCGCAAA 57.240 34.783 0.00 0.00 0.00 3.68
2728 2859 6.137794 TGAACTTATTGTCTTTCCGCAAAA 57.862 33.333 0.00 0.00 0.00 2.44
2729 2860 6.565234 TGAACTTATTGTCTTTCCGCAAAAA 58.435 32.000 0.00 0.00 0.00 1.94
2844 2978 4.363999 AGATGACGCTGAACAGTTATAGC 58.636 43.478 10.62 10.62 0.00 2.97
2885 3019 8.624776 AGTTTGAACATAGAAGTTCCAAGAAAG 58.375 33.333 0.00 0.00 45.62 2.62
2888 3022 8.746052 TGAACATAGAAGTTCCAAGAAAGAAA 57.254 30.769 0.00 0.00 45.62 2.52
3034 3171 4.459390 AAGCATTATTCAGTTGCATGCA 57.541 36.364 18.46 18.46 42.30 3.96
3043 3180 5.648178 TTCAGTTGCATGCACTGATAATT 57.352 34.783 33.55 13.32 39.81 1.40
3270 3407 2.748461 TTCGTGCACTTGTTTGCTAC 57.252 45.000 16.19 0.00 43.41 3.58
3271 3408 1.948104 TCGTGCACTTGTTTGCTACT 58.052 45.000 16.19 0.00 43.41 2.57
3272 3409 1.864711 TCGTGCACTTGTTTGCTACTC 59.135 47.619 16.19 0.00 43.41 2.59
3273 3410 1.069906 CGTGCACTTGTTTGCTACTCC 60.070 52.381 16.19 0.00 43.41 3.85
3274 3411 1.266989 GTGCACTTGTTTGCTACTCCC 59.733 52.381 10.32 0.00 43.41 4.30
3275 3412 1.142870 TGCACTTGTTTGCTACTCCCT 59.857 47.619 0.00 0.00 43.41 4.20
3276 3413 1.807142 GCACTTGTTTGCTACTCCCTC 59.193 52.381 0.00 0.00 39.59 4.30
3277 3414 2.427506 CACTTGTTTGCTACTCCCTCC 58.572 52.381 0.00 0.00 0.00 4.30
3278 3415 1.002087 ACTTGTTTGCTACTCCCTCCG 59.998 52.381 0.00 0.00 0.00 4.63
3279 3416 1.002087 CTTGTTTGCTACTCCCTCCGT 59.998 52.381 0.00 0.00 0.00 4.69
3280 3417 0.606604 TGTTTGCTACTCCCTCCGTC 59.393 55.000 0.00 0.00 0.00 4.79
3281 3418 0.108281 GTTTGCTACTCCCTCCGTCC 60.108 60.000 0.00 0.00 0.00 4.79
3282 3419 0.543410 TTTGCTACTCCCTCCGTCCA 60.543 55.000 0.00 0.00 0.00 4.02
3283 3420 0.543410 TTGCTACTCCCTCCGTCCAA 60.543 55.000 0.00 0.00 0.00 3.53
3284 3421 0.543410 TGCTACTCCCTCCGTCCAAA 60.543 55.000 0.00 0.00 0.00 3.28
3285 3422 0.611714 GCTACTCCCTCCGTCCAAAA 59.388 55.000 0.00 0.00 0.00 2.44
3286 3423 1.209747 GCTACTCCCTCCGTCCAAAAT 59.790 52.381 0.00 0.00 0.00 1.82
3287 3424 2.433239 GCTACTCCCTCCGTCCAAAATA 59.567 50.000 0.00 0.00 0.00 1.40
3288 3425 3.118519 GCTACTCCCTCCGTCCAAAATAA 60.119 47.826 0.00 0.00 0.00 1.40
3289 3426 3.629142 ACTCCCTCCGTCCAAAATAAG 57.371 47.619 0.00 0.00 0.00 1.73
3290 3427 2.910977 ACTCCCTCCGTCCAAAATAAGT 59.089 45.455 0.00 0.00 0.00 2.24
3291 3428 3.270877 CTCCCTCCGTCCAAAATAAGTG 58.729 50.000 0.00 0.00 0.00 3.16
3292 3429 2.640826 TCCCTCCGTCCAAAATAAGTGT 59.359 45.455 0.00 0.00 0.00 3.55
3293 3430 3.007635 CCCTCCGTCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3294 3431 3.307480 CCCTCCGTCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3295 3432 3.933332 CCTCCGTCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3296 3433 4.562757 CCTCCGTCCAAAATAAGTGTCTCA 60.563 45.833 0.00 0.00 0.00 3.27
3297 3434 4.963373 TCCGTCCAAAATAAGTGTCTCAA 58.037 39.130 0.00 0.00 0.00 3.02
3298 3435 5.369833 TCCGTCCAAAATAAGTGTCTCAAA 58.630 37.500 0.00 0.00 0.00 2.69
3299 3436 6.001460 TCCGTCCAAAATAAGTGTCTCAAAT 58.999 36.000 0.00 0.00 0.00 2.32
3300 3437 6.488683 TCCGTCCAAAATAAGTGTCTCAAATT 59.511 34.615 0.00 0.00 0.00 1.82
3301 3438 7.013846 TCCGTCCAAAATAAGTGTCTCAAATTT 59.986 33.333 0.00 0.00 0.00 1.82
3302 3439 7.114811 CCGTCCAAAATAAGTGTCTCAAATTTG 59.885 37.037 12.15 12.15 0.00 2.32
3303 3440 7.647715 CGTCCAAAATAAGTGTCTCAAATTTGT 59.352 33.333 17.47 0.00 0.00 2.83
3304 3441 9.959749 GTCCAAAATAAGTGTCTCAAATTTGTA 57.040 29.630 17.47 5.12 0.00 2.41
3305 3442 9.959749 TCCAAAATAAGTGTCTCAAATTTGTAC 57.040 29.630 17.47 16.14 0.00 2.90
3306 3443 9.965824 CCAAAATAAGTGTCTCAAATTTGTACT 57.034 29.630 17.47 13.89 0.00 2.73
3312 3449 8.747538 AAGTGTCTCAAATTTGTACTAACCTT 57.252 30.769 17.47 13.13 0.00 3.50
3313 3450 9.841295 AAGTGTCTCAAATTTGTACTAACCTTA 57.159 29.630 17.47 0.00 0.00 2.69
3314 3451 9.490379 AGTGTCTCAAATTTGTACTAACCTTAG 57.510 33.333 17.47 4.26 36.82 2.18
3315 3452 9.269453 GTGTCTCAAATTTGTACTAACCTTAGT 57.731 33.333 17.47 3.29 45.39 2.24
3340 3477 6.646267 ACAAAGTTGTACTAAGGTTGAGACA 58.354 36.000 0.00 0.00 40.16 3.41
3341 3478 6.537660 ACAAAGTTGTACTAAGGTTGAGACAC 59.462 38.462 0.00 0.00 40.16 3.67
3342 3479 4.868067 AGTTGTACTAAGGTTGAGACACG 58.132 43.478 0.00 0.00 0.00 4.49
3343 3480 4.340381 AGTTGTACTAAGGTTGAGACACGT 59.660 41.667 0.00 0.00 0.00 4.49
3344 3481 5.532406 AGTTGTACTAAGGTTGAGACACGTA 59.468 40.000 0.00 0.00 0.00 3.57
3345 3482 6.208204 AGTTGTACTAAGGTTGAGACACGTAT 59.792 38.462 0.00 0.00 0.00 3.06
3346 3483 6.579666 TGTACTAAGGTTGAGACACGTATT 57.420 37.500 0.00 0.00 0.00 1.89
3347 3484 6.985117 TGTACTAAGGTTGAGACACGTATTT 58.015 36.000 0.00 0.00 0.00 1.40
3348 3485 7.436118 TGTACTAAGGTTGAGACACGTATTTT 58.564 34.615 0.00 0.00 0.00 1.82
3349 3486 6.780706 ACTAAGGTTGAGACACGTATTTTG 57.219 37.500 0.00 0.00 0.00 2.44
3350 3487 5.699458 ACTAAGGTTGAGACACGTATTTTGG 59.301 40.000 0.00 0.00 0.00 3.28
3351 3488 3.408634 AGGTTGAGACACGTATTTTGGG 58.591 45.455 0.00 0.00 0.00 4.12
3352 3489 3.071892 AGGTTGAGACACGTATTTTGGGA 59.928 43.478 0.00 0.00 0.00 4.37
3353 3490 3.187842 GGTTGAGACACGTATTTTGGGAC 59.812 47.826 0.00 0.00 0.00 4.46
3354 3491 2.679450 TGAGACACGTATTTTGGGACG 58.321 47.619 0.00 0.00 44.57 4.79
3355 3492 1.997606 GAGACACGTATTTTGGGACGG 59.002 52.381 0.00 0.00 43.32 4.79
3356 3493 1.619827 AGACACGTATTTTGGGACGGA 59.380 47.619 0.00 0.00 43.32 4.69
3357 3494 1.997606 GACACGTATTTTGGGACGGAG 59.002 52.381 0.00 0.00 43.32 4.63
3358 3495 1.338389 ACACGTATTTTGGGACGGAGG 60.338 52.381 0.00 0.00 43.32 4.30
3359 3496 0.251073 ACGTATTTTGGGACGGAGGG 59.749 55.000 0.00 0.00 43.32 4.30
3360 3497 0.538118 CGTATTTTGGGACGGAGGGA 59.462 55.000 0.00 0.00 35.43 4.20
3464 3603 3.732212 GCTTTTGCAAGAAGTTGGGAAT 58.268 40.909 17.10 0.00 46.58 3.01
3562 3701 7.454225 AGGCCAATCACTTTCCTATAGTTATC 58.546 38.462 5.01 0.00 0.00 1.75
3644 3783 4.389374 ACAGACGTGGAAAATCATCTTGT 58.611 39.130 0.00 0.00 0.00 3.16
3884 4024 4.166523 CAATCATTCTGAGCAGCAGTTTG 58.833 43.478 0.00 6.05 45.14 2.93
3885 4025 3.130280 TCATTCTGAGCAGCAGTTTGA 57.870 42.857 0.00 7.84 45.14 2.69
3987 4128 8.994429 ACATATTCTCCTCTATAAGCATTTCG 57.006 34.615 0.00 0.00 0.00 3.46
4013 4154 8.895932 ATTCGTATTTATGCAAGAACAGTTTC 57.104 30.769 0.00 0.00 0.00 2.78
4014 4155 7.428282 TCGTATTTATGCAAGAACAGTTTCA 57.572 32.000 0.00 0.00 33.72 2.69
4036 4177 9.554395 TTTCATAGTACAAGAAGTTGTGAATCA 57.446 29.630 0.00 0.00 46.75 2.57
4043 4184 3.152341 AGAAGTTGTGAATCAGGCCTTG 58.848 45.455 0.00 0.00 0.00 3.61
4133 4274 1.069358 GGGAGGACCTTATCTTCAGCG 59.931 57.143 0.00 0.00 35.09 5.18
4319 4551 9.871238 TGTATTAAGAAGGTTTGAGTTAGCTAG 57.129 33.333 0.00 0.00 0.00 3.42
4325 4557 4.518249 AGGTTTGAGTTAGCTAGCATTCC 58.482 43.478 18.83 1.38 0.00 3.01
4328 4560 3.717400 TGAGTTAGCTAGCATTCCTCG 57.283 47.619 18.83 0.00 0.00 4.63
4381 4613 4.545610 ACACATATTTTGGTCTTTGCACG 58.454 39.130 0.00 0.00 0.00 5.34
4452 4684 7.113658 GTGATTCCACTATTCCAGTAGAAGA 57.886 40.000 0.00 0.00 38.13 2.87
4453 4685 6.981559 GTGATTCCACTATTCCAGTAGAAGAC 59.018 42.308 0.00 0.00 38.13 3.01
4454 4686 6.667848 TGATTCCACTATTCCAGTAGAAGACA 59.332 38.462 0.00 0.00 38.13 3.41
4455 4687 7.345653 TGATTCCACTATTCCAGTAGAAGACAT 59.654 37.037 0.00 0.00 38.13 3.06
4456 4688 6.716934 TCCACTATTCCAGTAGAAGACATC 57.283 41.667 0.00 0.00 38.07 3.06
4457 4689 6.194967 TCCACTATTCCAGTAGAAGACATCA 58.805 40.000 0.00 0.00 38.07 3.07
4458 4690 6.322456 TCCACTATTCCAGTAGAAGACATCAG 59.678 42.308 0.00 0.00 38.07 2.90
4493 4725 6.665465 ACGTTTTTATTCTTCAGTTAGCACC 58.335 36.000 0.00 0.00 0.00 5.01
4519 4751 8.439286 CGATTTGTTTCTTTTGGAACTGAAAAA 58.561 29.630 0.00 0.00 33.13 1.94
4524 4756 9.364989 TGTTTCTTTTGGAACTGAAAAACATAG 57.635 29.630 0.00 0.00 33.13 2.23
4535 4767 9.173939 GAACTGAAAAACATAGTTCACTTCATG 57.826 33.333 10.49 0.00 45.88 3.07
4539 4771 5.862924 AAACATAGTTCACTTCATGTCGG 57.137 39.130 0.00 0.00 31.40 4.79
4540 4772 3.262420 ACATAGTTCACTTCATGTCGGC 58.738 45.455 0.00 0.00 0.00 5.54
4559 4791 0.865111 CGTCTGCCGTTTGATGTTGA 59.135 50.000 0.00 0.00 0.00 3.18
4580 4812 3.773119 GACAGGTATACCCAAGGAACAGA 59.227 47.826 18.65 0.00 36.42 3.41
4679 4911 4.096382 GTCGTGCCATGGTTATGAAAATCT 59.904 41.667 14.67 0.00 36.36 2.40
4686 4918 6.532657 GCCATGGTTATGAAAATCTGACTTTG 59.467 38.462 14.67 0.00 36.36 2.77
4696 4928 7.041107 TGAAAATCTGACTTTGTTCTTTTGGG 58.959 34.615 0.00 0.00 0.00 4.12
4707 4939 7.763985 ACTTTGTTCTTTTGGGAATAACTTGTG 59.236 33.333 0.00 0.00 0.00 3.33
4745 4977 6.927936 GCAGATTGAGAATACTAGCAGAATCA 59.072 38.462 0.00 0.00 0.00 2.57
4829 5061 4.217035 AGCACACACGCTTGTTCA 57.783 50.000 0.00 0.00 39.99 3.18
4835 5067 0.586319 CACACGCTTGTTCATCGGTT 59.414 50.000 0.00 0.00 31.66 4.44
4901 5133 2.017138 TATCGTGAATTTCGCAGGCA 57.983 45.000 10.36 0.00 0.00 4.75
4943 5175 1.216710 CTGCCACGAGGAGAAGGAC 59.783 63.158 1.86 0.00 36.89 3.85
4998 5230 7.147724 TGGAACCTCATGAACGAAATCTATAGT 60.148 37.037 0.00 0.00 0.00 2.12
5008 5240 8.528643 TGAACGAAATCTATAGTTCTGAAGGAA 58.471 33.333 0.00 0.00 42.29 3.36
5024 5256 4.343526 TGAAGGAAAATGTAGCTTTGCCAA 59.656 37.500 0.00 0.00 36.40 4.52
5025 5257 4.525912 AGGAAAATGTAGCTTTGCCAAG 57.474 40.909 0.00 0.00 36.40 3.61
5040 5272 2.061028 GCCAAGCATGTGTAGTTTTGC 58.939 47.619 0.00 0.00 35.34 3.68
5046 5278 3.503748 AGCATGTGTAGTTTTGCTTCTCC 59.496 43.478 0.00 0.00 42.52 3.71
5080 5312 1.168714 GGCTGGTAGCTGTTTCCAAG 58.831 55.000 0.00 0.00 41.99 3.61
5081 5313 1.168714 GCTGGTAGCTGTTTCCAAGG 58.831 55.000 0.00 0.00 38.45 3.61
5087 5319 1.006922 GCTGTTTCCAAGGCTGTGC 60.007 57.895 0.00 0.00 0.00 4.57
5088 5320 1.737355 GCTGTTTCCAAGGCTGTGCA 61.737 55.000 0.00 0.00 0.00 4.57
5089 5321 0.313043 CTGTTTCCAAGGCTGTGCAG 59.687 55.000 0.00 0.00 0.00 4.41
5101 5333 2.298411 CTGTGCAGCAAACCTTTGTT 57.702 45.000 0.00 0.00 40.24 2.83
5103 5335 1.289276 GTGCAGCAAACCTTTGTTGG 58.711 50.000 14.21 0.00 45.67 3.77
5104 5336 1.134848 GTGCAGCAAACCTTTGTTGGA 60.135 47.619 14.21 9.90 45.67 3.53
5105 5337 1.136695 TGCAGCAAACCTTTGTTGGAG 59.863 47.619 14.21 0.00 45.67 3.86
5106 5338 1.408702 GCAGCAAACCTTTGTTGGAGA 59.591 47.619 14.21 0.00 45.67 3.71
5107 5339 2.799562 GCAGCAAACCTTTGTTGGAGAC 60.800 50.000 14.21 0.00 45.67 3.36
5108 5340 1.676006 AGCAAACCTTTGTTGGAGACG 59.324 47.619 0.00 0.00 40.24 4.18
5114 5346 3.493873 AACCTTTGTTGGAGACGGTAGTC 60.494 47.826 0.00 0.00 39.39 2.59
5122 5354 2.184579 GACGGTAGTCTGGCAGGC 59.815 66.667 12.08 12.08 43.80 4.85
5128 5360 0.100861 GTAGTCTGGCAGGCTCGTAC 59.899 60.000 27.25 15.01 29.80 3.67
5132 5364 1.032794 TCTGGCAGGCTCGTACATAG 58.967 55.000 15.73 0.00 0.00 2.23
5151 5424 7.478520 ACATAGTTGTTGTTCTCTGTTGTAC 57.521 36.000 0.00 0.00 29.55 2.90
5157 5430 5.597806 TGTTGTTCTCTGTTGTACTGTAGG 58.402 41.667 0.00 0.00 0.00 3.18
5158 5431 4.866508 TGTTCTCTGTTGTACTGTAGGG 57.133 45.455 0.00 0.00 0.00 3.53
5175 5449 3.356529 AGGGCAGTAAGGAGAATGTTG 57.643 47.619 0.00 0.00 0.00 3.33
5176 5450 1.745653 GGGCAGTAAGGAGAATGTTGC 59.254 52.381 0.00 0.00 0.00 4.17
5179 5453 3.338249 GCAGTAAGGAGAATGTTGCTCA 58.662 45.455 0.00 0.00 34.07 4.26
5182 5457 3.944015 AGTAAGGAGAATGTTGCTCATGC 59.056 43.478 0.00 0.00 36.81 4.06
5204 5479 3.879295 CCGCATGAATCTATGGACAAGTT 59.121 43.478 0.00 0.00 0.00 2.66
5206 5481 5.504665 CCGCATGAATCTATGGACAAGTTTC 60.505 44.000 0.00 0.00 0.00 2.78
5209 5484 7.307042 CGCATGAATCTATGGACAAGTTTCTAG 60.307 40.741 0.00 0.00 0.00 2.43
5219 5494 7.435068 TGGACAAGTTTCTAGCTATTTTGTC 57.565 36.000 18.11 18.11 41.12 3.18
5224 5501 6.866179 AGTTTCTAGCTATTTTGTCGTACG 57.134 37.500 9.53 9.53 0.00 3.67
5229 5506 2.095059 AGCTATTTTGTCGTACGACCGT 60.095 45.455 37.57 24.67 43.97 4.83
5230 5507 2.663119 GCTATTTTGTCGTACGACCGTT 59.337 45.455 37.57 24.23 43.97 4.44
5231 5508 3.121778 GCTATTTTGTCGTACGACCGTTT 59.878 43.478 37.57 24.53 43.97 3.60
5232 5509 4.376311 GCTATTTTGTCGTACGACCGTTTT 60.376 41.667 37.57 23.35 43.97 2.43
5243 5520 1.602377 CGACCGTTTTCTTTGCCTTCT 59.398 47.619 0.00 0.00 0.00 2.85
5254 5531 3.190878 GCCTTCTCAATGGCCACG 58.809 61.111 8.16 1.50 43.11 4.94
5255 5532 1.377202 GCCTTCTCAATGGCCACGA 60.377 57.895 8.16 7.13 43.11 4.35
5256 5533 0.749454 GCCTTCTCAATGGCCACGAT 60.749 55.000 8.16 0.00 43.11 3.73
5257 5534 1.019673 CCTTCTCAATGGCCACGATG 58.980 55.000 8.16 8.31 0.00 3.84
5259 5536 0.327924 TTCTCAATGGCCACGATGGT 59.672 50.000 8.16 0.00 40.46 3.55
5263 5540 1.967066 TCAATGGCCACGATGGTTTTT 59.033 42.857 8.16 0.00 40.46 1.94
5264 5541 3.157881 TCAATGGCCACGATGGTTTTTA 58.842 40.909 8.16 0.00 40.46 1.52
5294 5571 3.911989 CAGCTATTGCAGGCGAAAG 57.088 52.632 1.12 0.00 42.74 2.62
5319 5596 9.057089 AGCAGGAGTATAATAAAAATACAGCAC 57.943 33.333 0.00 0.00 33.15 4.40
5320 5597 9.057089 GCAGGAGTATAATAAAAATACAGCACT 57.943 33.333 0.00 0.00 33.15 4.40
5322 5599 9.780186 AGGAGTATAATAAAAATACAGCACTCC 57.220 33.333 0.00 0.00 45.58 3.85
5323 5600 9.000486 GGAGTATAATAAAAATACAGCACTCCC 58.000 37.037 0.00 0.00 41.50 4.30
5324 5601 9.780186 GAGTATAATAAAAATACAGCACTCCCT 57.220 33.333 0.00 0.00 33.15 4.20
5325 5602 9.780186 AGTATAATAAAAATACAGCACTCCCTC 57.220 33.333 0.00 0.00 33.15 4.30
5326 5603 9.780186 GTATAATAAAAATACAGCACTCCCTCT 57.220 33.333 0.00 0.00 31.43 3.69
5327 5604 8.682936 ATAATAAAAATACAGCACTCCCTCTG 57.317 34.615 0.00 0.00 36.45 3.35
5328 5605 4.640771 AAAAATACAGCACTCCCTCTGA 57.359 40.909 0.00 0.00 34.57 3.27
5329 5606 4.640771 AAAATACAGCACTCCCTCTGAA 57.359 40.909 0.00 0.00 34.57 3.02
5330 5607 4.851639 AAATACAGCACTCCCTCTGAAT 57.148 40.909 0.00 0.00 34.57 2.57
5331 5608 3.834489 ATACAGCACTCCCTCTGAATG 57.166 47.619 0.00 0.00 34.57 2.67
5332 5609 1.649321 ACAGCACTCCCTCTGAATGA 58.351 50.000 0.00 0.00 34.57 2.57
5333 5610 1.554160 ACAGCACTCCCTCTGAATGAG 59.446 52.381 0.00 2.52 42.30 2.90
5334 5611 1.829849 CAGCACTCCCTCTGAATGAGA 59.170 52.381 9.37 0.00 45.39 3.27
5348 5625 8.984891 CTCTGAATGAGAGGCAAGTAATATAG 57.015 38.462 0.00 0.00 44.25 1.31
5349 5626 8.712228 TCTGAATGAGAGGCAAGTAATATAGA 57.288 34.615 0.00 0.00 0.00 1.98
5350 5627 9.319060 TCTGAATGAGAGGCAAGTAATATAGAT 57.681 33.333 0.00 0.00 0.00 1.98
5351 5628 9.585099 CTGAATGAGAGGCAAGTAATATAGATC 57.415 37.037 0.00 0.00 0.00 2.75
5352 5629 8.246871 TGAATGAGAGGCAAGTAATATAGATCG 58.753 37.037 0.00 0.00 0.00 3.69
5353 5630 7.946381 ATGAGAGGCAAGTAATATAGATCGA 57.054 36.000 0.00 0.00 0.00 3.59
5354 5631 7.761038 TGAGAGGCAAGTAATATAGATCGAA 57.239 36.000 0.00 0.00 0.00 3.71
5355 5632 7.821652 TGAGAGGCAAGTAATATAGATCGAAG 58.178 38.462 0.00 0.00 0.00 3.79
5356 5633 7.094162 TGAGAGGCAAGTAATATAGATCGAAGG 60.094 40.741 0.00 0.00 0.00 3.46
5357 5634 6.153680 AGAGGCAAGTAATATAGATCGAAGGG 59.846 42.308 0.00 0.00 0.00 3.95
5358 5635 6.017192 AGGCAAGTAATATAGATCGAAGGGA 58.983 40.000 0.00 0.00 0.00 4.20
5359 5636 6.153680 AGGCAAGTAATATAGATCGAAGGGAG 59.846 42.308 0.00 0.00 0.00 4.30
5360 5637 6.071278 GGCAAGTAATATAGATCGAAGGGAGT 60.071 42.308 0.00 0.00 0.00 3.85
5361 5638 7.122353 GGCAAGTAATATAGATCGAAGGGAGTA 59.878 40.741 0.00 0.00 0.00 2.59
5362 5639 8.185505 GCAAGTAATATAGATCGAAGGGAGTAG 58.814 40.741 0.00 0.00 0.00 2.57
5363 5640 9.233649 CAAGTAATATAGATCGAAGGGAGTAGT 57.766 37.037 0.00 0.00 0.00 2.73
5371 5648 7.419711 AGATCGAAGGGAGTAGTAAATTTCA 57.580 36.000 0.00 0.00 0.00 2.69
5372 5649 7.493367 AGATCGAAGGGAGTAGTAAATTTCAG 58.507 38.462 0.00 0.00 0.00 3.02
5373 5650 6.845758 TCGAAGGGAGTAGTAAATTTCAGA 57.154 37.500 0.00 0.00 0.00 3.27
5374 5651 7.235935 TCGAAGGGAGTAGTAAATTTCAGAA 57.764 36.000 0.00 0.00 0.00 3.02
5375 5652 7.673180 TCGAAGGGAGTAGTAAATTTCAGAAA 58.327 34.615 0.00 0.00 0.00 2.52
5376 5653 8.152246 TCGAAGGGAGTAGTAAATTTCAGAAAA 58.848 33.333 0.00 0.00 0.00 2.29
5377 5654 8.228464 CGAAGGGAGTAGTAAATTTCAGAAAAC 58.772 37.037 0.00 0.00 0.00 2.43
5378 5655 8.990163 AAGGGAGTAGTAAATTTCAGAAAACA 57.010 30.769 0.00 0.00 0.00 2.83
5379 5656 9.588096 AAGGGAGTAGTAAATTTCAGAAAACAT 57.412 29.630 0.00 0.00 0.00 2.71
5380 5657 9.014297 AGGGAGTAGTAAATTTCAGAAAACATG 57.986 33.333 0.00 0.00 0.00 3.21
5381 5658 7.755373 GGGAGTAGTAAATTTCAGAAAACATGC 59.245 37.037 0.00 0.00 0.00 4.06
5382 5659 8.515414 GGAGTAGTAAATTTCAGAAAACATGCT 58.485 33.333 0.00 1.46 0.00 3.79
5383 5660 9.334693 GAGTAGTAAATTTCAGAAAACATGCTG 57.665 33.333 0.00 0.00 0.00 4.41
5384 5661 7.809806 AGTAGTAAATTTCAGAAAACATGCTGC 59.190 33.333 0.00 0.00 32.27 5.25
5385 5662 6.752168 AGTAAATTTCAGAAAACATGCTGCT 58.248 32.000 0.00 0.00 32.27 4.24
5386 5663 7.212274 AGTAAATTTCAGAAAACATGCTGCTT 58.788 30.769 0.00 0.00 32.27 3.91
5387 5664 6.535274 AAATTTCAGAAAACATGCTGCTTC 57.465 33.333 0.00 0.00 32.27 3.86
5388 5665 4.652421 TTTCAGAAAACATGCTGCTTCA 57.348 36.364 0.00 0.00 32.27 3.02
5389 5666 3.909776 TCAGAAAACATGCTGCTTCAG 57.090 42.857 0.00 0.00 32.27 3.02
5390 5667 3.479489 TCAGAAAACATGCTGCTTCAGA 58.521 40.909 0.00 0.00 32.44 3.27
5391 5668 4.077108 TCAGAAAACATGCTGCTTCAGAT 58.923 39.130 0.00 0.00 32.44 2.90
5392 5669 5.247862 TCAGAAAACATGCTGCTTCAGATA 58.752 37.500 0.00 0.00 32.44 1.98
5393 5670 5.706833 TCAGAAAACATGCTGCTTCAGATAA 59.293 36.000 0.00 0.00 32.44 1.75
5394 5671 6.376299 TCAGAAAACATGCTGCTTCAGATAAT 59.624 34.615 0.00 0.00 32.44 1.28
5395 5672 6.472486 CAGAAAACATGCTGCTTCAGATAATG 59.528 38.462 0.00 0.00 32.44 1.90
5396 5673 5.909621 AAACATGCTGCTTCAGATAATGT 57.090 34.783 0.00 0.00 35.03 2.71
5397 5674 7.337689 AGAAAACATGCTGCTTCAGATAATGTA 59.662 33.333 0.00 0.00 33.63 2.29
5398 5675 6.615264 AACATGCTGCTTCAGATAATGTAG 57.385 37.500 0.00 0.00 33.63 2.74
5404 5681 4.963237 GCTTCAGATAATGTAGCGTGAG 57.037 45.455 0.00 0.00 41.66 3.51
5405 5682 4.363999 GCTTCAGATAATGTAGCGTGAGT 58.636 43.478 0.00 0.00 41.66 3.41
5406 5683 4.208047 GCTTCAGATAATGTAGCGTGAGTG 59.792 45.833 0.00 0.00 41.66 3.51
5407 5684 3.706698 TCAGATAATGTAGCGTGAGTGC 58.293 45.455 0.00 0.00 0.00 4.40
5408 5685 2.797156 CAGATAATGTAGCGTGAGTGCC 59.203 50.000 0.00 0.00 34.65 5.01
5409 5686 2.430694 AGATAATGTAGCGTGAGTGCCA 59.569 45.455 0.00 0.00 34.65 4.92
5410 5687 2.979814 TAATGTAGCGTGAGTGCCAT 57.020 45.000 0.00 0.00 34.65 4.40
5411 5688 2.979814 AATGTAGCGTGAGTGCCATA 57.020 45.000 0.00 0.00 34.65 2.74
5412 5689 2.979814 ATGTAGCGTGAGTGCCATAA 57.020 45.000 0.00 0.00 34.65 1.90
5413 5690 2.979814 TGTAGCGTGAGTGCCATAAT 57.020 45.000 0.00 0.00 34.65 1.28
5414 5691 3.260475 TGTAGCGTGAGTGCCATAATT 57.740 42.857 0.00 0.00 34.65 1.40
5415 5692 3.194861 TGTAGCGTGAGTGCCATAATTC 58.805 45.455 0.00 0.00 34.65 2.17
5416 5693 2.401583 AGCGTGAGTGCCATAATTCA 57.598 45.000 0.00 0.00 34.65 2.57
5417 5694 2.923121 AGCGTGAGTGCCATAATTCAT 58.077 42.857 0.00 0.00 34.65 2.57
5418 5695 4.071961 AGCGTGAGTGCCATAATTCATA 57.928 40.909 0.00 0.00 34.65 2.15
5419 5696 4.060900 AGCGTGAGTGCCATAATTCATAG 58.939 43.478 0.00 0.00 34.65 2.23
5420 5697 3.809832 GCGTGAGTGCCATAATTCATAGT 59.190 43.478 0.00 0.00 0.00 2.12
5421 5698 4.988540 GCGTGAGTGCCATAATTCATAGTA 59.011 41.667 0.00 0.00 0.00 1.82
5422 5699 5.107453 GCGTGAGTGCCATAATTCATAGTAC 60.107 44.000 0.00 0.00 0.00 2.73
5423 5700 5.983118 CGTGAGTGCCATAATTCATAGTACA 59.017 40.000 0.00 0.00 0.00 2.90
5424 5701 6.646653 CGTGAGTGCCATAATTCATAGTACAT 59.353 38.462 0.00 0.00 0.00 2.29
5425 5702 7.148738 CGTGAGTGCCATAATTCATAGTACATC 60.149 40.741 0.00 0.00 0.00 3.06
5426 5703 7.657354 GTGAGTGCCATAATTCATAGTACATCA 59.343 37.037 0.00 0.00 0.00 3.07
5427 5704 7.657354 TGAGTGCCATAATTCATAGTACATCAC 59.343 37.037 0.00 0.00 0.00 3.06
5428 5705 7.508687 AGTGCCATAATTCATAGTACATCACA 58.491 34.615 0.00 0.00 0.00 3.58
5429 5706 7.658982 AGTGCCATAATTCATAGTACATCACAG 59.341 37.037 0.00 0.00 0.00 3.66
5430 5707 6.936335 TGCCATAATTCATAGTACATCACAGG 59.064 38.462 0.00 0.00 0.00 4.00
5431 5708 6.372659 GCCATAATTCATAGTACATCACAGGG 59.627 42.308 0.00 0.00 0.00 4.45
5432 5709 7.453393 CCATAATTCATAGTACATCACAGGGT 58.547 38.462 0.00 0.00 0.00 4.34
5433 5710 7.604164 CCATAATTCATAGTACATCACAGGGTC 59.396 40.741 0.00 0.00 0.00 4.46
5434 5711 6.814954 AATTCATAGTACATCACAGGGTCT 57.185 37.500 0.00 0.00 0.00 3.85
5435 5712 6.814954 ATTCATAGTACATCACAGGGTCTT 57.185 37.500 0.00 0.00 0.00 3.01
5436 5713 5.854010 TCATAGTACATCACAGGGTCTTC 57.146 43.478 0.00 0.00 0.00 2.87
5437 5714 4.338400 TCATAGTACATCACAGGGTCTTCG 59.662 45.833 0.00 0.00 0.00 3.79
5438 5715 1.825474 AGTACATCACAGGGTCTTCGG 59.175 52.381 0.00 0.00 0.00 4.30
5439 5716 0.535335 TACATCACAGGGTCTTCGGC 59.465 55.000 0.00 0.00 0.00 5.54
5440 5717 1.296392 CATCACAGGGTCTTCGGCA 59.704 57.895 0.00 0.00 0.00 5.69
5441 5718 0.321564 CATCACAGGGTCTTCGGCAA 60.322 55.000 0.00 0.00 0.00 4.52
5442 5719 0.321653 ATCACAGGGTCTTCGGCAAC 60.322 55.000 0.00 0.00 0.00 4.17
5468 5746 5.514169 TGCCCATATAAGATGGTGTTTTCA 58.486 37.500 2.54 0.00 37.48 2.69
5474 5752 8.571336 CCATATAAGATGGTGTTTTCAGGAATC 58.429 37.037 0.00 0.00 34.56 2.52
5478 5756 9.927081 ATAAGATGGTGTTTTCAGGAATCTAAT 57.073 29.630 0.00 0.00 0.00 1.73
5492 5770 8.830580 TCAGGAATCTAATAAGAAAGAAATGCG 58.169 33.333 0.00 0.00 34.73 4.73
5493 5771 7.589221 CAGGAATCTAATAAGAAAGAAATGCGC 59.411 37.037 0.00 0.00 34.73 6.09
5494 5772 6.858478 GGAATCTAATAAGAAAGAAATGCGCC 59.142 38.462 4.18 0.00 34.73 6.53
5496 5774 7.573968 ATCTAATAAGAAAGAAATGCGCCTT 57.426 32.000 4.18 0.00 34.73 4.35
5502 5780 5.048153 AGAAAGAAATGCGCCTTAAAGTC 57.952 39.130 4.18 0.00 0.00 3.01
5508 5786 6.322491 AGAAATGCGCCTTAAAGTCATTTAC 58.678 36.000 4.18 0.00 37.45 2.01
5534 5812 5.181245 ACAGAATAACCATCAACAAAGGACG 59.819 40.000 0.00 0.00 0.00 4.79
5555 5833 2.626840 GTCCAAAGTTGCAGGCAAAAA 58.373 42.857 8.47 0.00 37.70 1.94
5556 5834 3.205338 GTCCAAAGTTGCAGGCAAAAAT 58.795 40.909 8.47 0.00 37.70 1.82
5557 5835 3.002553 GTCCAAAGTTGCAGGCAAAAATG 59.997 43.478 8.47 7.57 37.70 2.32
5558 5836 2.944349 CCAAAGTTGCAGGCAAAAATGT 59.056 40.909 8.47 0.00 37.70 2.71
5559 5837 3.002553 CCAAAGTTGCAGGCAAAAATGTC 59.997 43.478 8.47 0.00 37.70 3.06
5560 5838 3.540314 AAGTTGCAGGCAAAAATGTCA 57.460 38.095 8.47 0.00 37.70 3.58
5561 5839 2.825205 AGTTGCAGGCAAAAATGTCAC 58.175 42.857 8.47 0.00 37.70 3.67
5564 5842 0.031994 GCAGGCAAAAATGTCACGGT 59.968 50.000 0.00 0.00 0.00 4.83
5567 5845 2.028130 AGGCAAAAATGTCACGGTCAA 58.972 42.857 0.00 0.00 0.00 3.18
5607 5885 0.978907 CCCAGGGCATTTTCAAAGCT 59.021 50.000 0.00 0.00 0.00 3.74
5626 5904 3.499918 AGCTTGTTGCACTGTGAGATAAC 59.500 43.478 12.86 10.56 45.94 1.89
5642 5920 6.094186 GTGAGATAACCCAGATCCAAAAACTC 59.906 42.308 0.00 0.00 0.00 3.01
5665 5943 2.109304 CCCCTTCCTTGGAAGTTAACCA 59.891 50.000 23.12 0.00 35.47 3.67
5714 5994 0.460109 CATCTGACCGATGGTGCGAA 60.460 55.000 0.00 0.00 44.69 4.70
5721 6001 0.238289 CCGATGGTGCGAAATATGCC 59.762 55.000 0.00 0.00 0.00 4.40
5765 6045 3.368236 GCTACTTACTGAAAACGGAGCTG 59.632 47.826 0.00 0.00 0.00 4.24
5771 6051 3.279434 ACTGAAAACGGAGCTGAAGTTT 58.721 40.909 0.00 0.00 39.45 2.66
5876 6169 2.386661 ACAGCGGTGGTCAATAAGAG 57.613 50.000 20.20 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.691976 TCCACTCTGTCGTTTGATGGT 59.308 47.619 0.00 0.00 0.00 3.55
17 18 5.655488 CTTATCAAGATCCACTCTGTCGTT 58.345 41.667 0.00 0.00 33.29 3.85
27 28 2.972021 TCCGATGGCTTATCAAGATCCA 59.028 45.455 0.00 0.00 35.43 3.41
46 47 3.063485 GACAGTGTCAGCTTCTTTCTCC 58.937 50.000 18.54 0.00 32.09 3.71
57 58 2.074576 CTGATGGCTTGACAGTGTCAG 58.925 52.381 24.25 18.80 43.69 3.51
92 96 1.079543 CGGTGACTGGCTCCTCAAG 60.080 63.158 0.00 0.00 0.00 3.02
123 127 1.004440 GCACTGGCTTCGTCTTCCT 60.004 57.895 0.00 0.00 36.96 3.36
196 200 3.583806 CTCTGATGACTTCACAGTGTCC 58.416 50.000 0.00 0.00 31.22 4.02
230 234 1.739562 CAGTGGCTGGCTTCTCGAC 60.740 63.158 2.00 0.00 0.00 4.20
232 236 1.739562 GTCAGTGGCTGGCTTCTCG 60.740 63.158 2.00 0.00 32.76 4.04
334 338 2.125106 GTGGCCGAGTCCATGTCC 60.125 66.667 0.00 0.00 38.57 4.02
363 367 0.250467 GTTCTTCTCTGTGGCAGGCA 60.250 55.000 0.00 0.00 31.51 4.75
378 382 3.133721 GTGAGCTCAGGGTGATATGTTCT 59.866 47.826 18.89 0.00 0.00 3.01
389 393 3.775654 GTCCCGGTGAGCTCAGGG 61.776 72.222 27.79 27.79 45.10 4.45
408 412 2.272146 CTGTGCCCGGCTAACCAT 59.728 61.111 11.61 0.00 34.57 3.55
468 481 5.870978 ACGCAAAACTATCAACGGTAGTATT 59.129 36.000 0.00 0.00 32.34 1.89
528 546 6.560687 TCCTTTTCCCCCTCAAATTTTACAAT 59.439 34.615 0.00 0.00 0.00 2.71
547 565 7.773099 AAATACCCTATCCTTCTCTCCTTTT 57.227 36.000 0.00 0.00 0.00 2.27
551 569 7.256368 CCAAGTAAATACCCTATCCTTCTCTCC 60.256 44.444 0.00 0.00 0.00 3.71
580 602 2.095059 GCTTATTGCTTGTGGGTGAGTG 60.095 50.000 0.00 0.00 38.95 3.51
587 609 1.106285 GAGGGGCTTATTGCTTGTGG 58.894 55.000 0.00 0.00 42.39 4.17
724 748 4.033932 GCACAAACAAATCTGAACCAAACC 59.966 41.667 0.00 0.00 0.00 3.27
783 808 1.206878 TCCATCTAGCCACAGCACAT 58.793 50.000 0.00 0.00 43.56 3.21
866 896 0.674581 TAGCCACAGCACATCTGCAC 60.675 55.000 0.00 0.00 46.97 4.57
894 924 5.892686 AGGTTGTTCTGGATAGTAGGAGTAC 59.107 44.000 0.00 0.00 0.00 2.73
897 927 5.163395 GGAAGGTTGTTCTGGATAGTAGGAG 60.163 48.000 0.00 0.00 0.00 3.69
898 928 4.715297 GGAAGGTTGTTCTGGATAGTAGGA 59.285 45.833 0.00 0.00 0.00 2.94
899 929 4.469945 TGGAAGGTTGTTCTGGATAGTAGG 59.530 45.833 0.00 0.00 0.00 3.18
1138 1184 0.461135 CAAATGGGAGGCAAATCGGG 59.539 55.000 0.00 0.00 0.00 5.14
1164 1210 1.068194 CGCCGCAATCCAAAAACCTAA 60.068 47.619 0.00 0.00 0.00 2.69
1165 1211 0.523966 CGCCGCAATCCAAAAACCTA 59.476 50.000 0.00 0.00 0.00 3.08
1166 1212 1.288752 CGCCGCAATCCAAAAACCT 59.711 52.632 0.00 0.00 0.00 3.50
1167 1213 1.736282 CCGCCGCAATCCAAAAACC 60.736 57.895 0.00 0.00 0.00 3.27
1168 1214 1.006688 ACCGCCGCAATCCAAAAAC 60.007 52.632 0.00 0.00 0.00 2.43
1186 1232 1.374947 GCTTCCACACCTACAGCCA 59.625 57.895 0.00 0.00 0.00 4.75
1187 1233 0.674895 CTGCTTCCACACCTACAGCC 60.675 60.000 0.00 0.00 0.00 4.85
1188 1234 0.321671 TCTGCTTCCACACCTACAGC 59.678 55.000 0.00 0.00 0.00 4.40
1191 1237 1.443802 GCTTCTGCTTCCACACCTAC 58.556 55.000 0.00 0.00 36.03 3.18
1192 1238 3.935993 GCTTCTGCTTCCACACCTA 57.064 52.632 0.00 0.00 36.03 3.08
1233 1280 2.184579 CCGGCGTCCTTCTTCTCC 59.815 66.667 6.01 0.00 0.00 3.71
1339 1386 1.339097 CAGCTAGCTATTACCCCCGT 58.661 55.000 18.86 0.00 0.00 5.28
1405 1452 1.613630 ACACAGCACTAGGGGAGGG 60.614 63.158 0.00 0.00 0.00 4.30
1407 1454 1.078848 GCACACAGCACTAGGGGAG 60.079 63.158 0.00 0.00 44.79 4.30
1408 1455 3.068881 GCACACAGCACTAGGGGA 58.931 61.111 0.00 0.00 44.79 4.81
1430 1477 1.747355 GGGAACTGAATGCAGATGTGG 59.253 52.381 8.02 0.00 45.17 4.17
1443 1490 0.032540 GTGCAAGCCTTTGGGAACTG 59.967 55.000 0.00 0.00 34.79 3.16
1446 1493 1.114722 CAGGTGCAAGCCTTTGGGAA 61.115 55.000 0.00 0.00 36.58 3.97
1449 1496 2.341176 GCAGGTGCAAGCCTTTGG 59.659 61.111 0.00 0.00 41.59 3.28
1463 1535 1.255882 TGCCCACATTACTTTGGCAG 58.744 50.000 0.00 0.00 46.57 4.85
1481 1553 4.767478 TCTCTCAGAAGGCTCATTTGATG 58.233 43.478 0.00 0.00 0.00 3.07
1489 1561 2.677337 GTTGCAATCTCTCAGAAGGCTC 59.323 50.000 0.59 0.00 31.31 4.70
1509 1603 2.233676 TCATGTGAATACAGGCACTCGT 59.766 45.455 0.00 0.00 40.79 4.18
1676 1779 2.592102 TGCTCCTCTTTGCAGGATTT 57.408 45.000 0.00 0.00 42.02 2.17
1685 1788 3.441572 CGGATGACATTTTGCTCCTCTTT 59.558 43.478 0.00 0.00 0.00 2.52
1720 1823 4.829064 TGTCCACTAATTGCTTTGTGAC 57.171 40.909 2.60 0.00 39.51 3.67
1729 1832 4.581824 CCTTCCCATCATGTCCACTAATTG 59.418 45.833 0.00 0.00 0.00 2.32
1732 1835 3.455910 CTCCTTCCCATCATGTCCACTAA 59.544 47.826 0.00 0.00 0.00 2.24
1742 1845 0.621571 CCACCTCCTCCTTCCCATCA 60.622 60.000 0.00 0.00 0.00 3.07
1752 1855 3.155167 CCCGGTAGCCACCTCCTC 61.155 72.222 0.00 0.00 43.33 3.71
1874 1977 4.164796 TCAGTATCAAGAGACCCTACGGTA 59.835 45.833 0.00 0.00 44.88 4.02
1894 1997 5.815233 ATCAGGTCATGGTTATACCTCAG 57.185 43.478 0.11 0.00 41.75 3.35
1975 2081 9.653287 CAAACTATAGAAGAATAGGTGTGTCAA 57.347 33.333 6.78 0.00 34.34 3.18
1976 2082 7.764443 GCAAACTATAGAAGAATAGGTGTGTCA 59.236 37.037 6.78 0.00 34.34 3.58
1977 2083 7.224949 GGCAAACTATAGAAGAATAGGTGTGTC 59.775 40.741 6.78 0.00 34.34 3.67
1978 2084 7.048512 GGCAAACTATAGAAGAATAGGTGTGT 58.951 38.462 6.78 0.00 34.34 3.72
2163 2269 4.806247 CGAGAAGTGAAGACTTTCAAGTGT 59.194 41.667 0.00 0.00 44.49 3.55
2186 2294 2.355010 ATGAGATAAAGCCCAGCACC 57.645 50.000 0.00 0.00 0.00 5.01
2221 2330 6.651643 TGAATTAGCATGCAAAGCAGAAAATT 59.348 30.769 21.98 13.74 43.65 1.82
2310 2419 6.778821 TCCAAAAATCTCAGTGATGTTCCTA 58.221 36.000 0.00 0.00 31.67 2.94
2363 2472 6.631971 ACAATGTGTGAATGTGTCAATGTA 57.368 33.333 0.00 0.00 38.23 2.29
2377 2486 9.203421 TGAGAACATTACTAAGTACAATGTGTG 57.797 33.333 8.72 4.49 40.94 3.82
2388 2497 9.778993 CAACCAAATGATGAGAACATTACTAAG 57.221 33.333 0.00 0.00 37.04 2.18
2390 2499 9.685276 ATCAACCAAATGATGAGAACATTACTA 57.315 29.630 0.00 0.00 38.59 1.82
2424 2533 7.718272 TGGCTTCAAGAGAAAAATGAAATTG 57.282 32.000 0.00 0.00 36.10 2.32
2492 2601 4.574892 TGAATGGCAGTTTCTCGATTACA 58.425 39.130 0.00 0.00 0.00 2.41
2742 2873 9.956720 CAAGACAAAGACAATAAGTTCATCTTT 57.043 29.630 0.00 0.00 39.58 2.52
2744 2875 8.682936 ACAAGACAAAGACAATAAGTTCATCT 57.317 30.769 0.00 0.00 0.00 2.90
2844 2978 3.364549 TCAAACTCCTATTTGGCCCATG 58.635 45.455 0.00 0.00 39.57 3.66
3248 3385 2.909076 GCAAACAAGTGCACGAATTG 57.091 45.000 12.01 13.17 44.29 2.32
3270 3407 3.270877 CACTTATTTTGGACGGAGGGAG 58.729 50.000 0.00 0.00 0.00 4.30
3271 3408 2.640826 ACACTTATTTTGGACGGAGGGA 59.359 45.455 0.00 0.00 0.00 4.20
3272 3409 3.007635 GACACTTATTTTGGACGGAGGG 58.992 50.000 0.00 0.00 0.00 4.30
3273 3410 3.933332 GAGACACTTATTTTGGACGGAGG 59.067 47.826 0.00 0.00 0.00 4.30
3274 3411 4.566004 TGAGACACTTATTTTGGACGGAG 58.434 43.478 0.00 0.00 0.00 4.63
3275 3412 4.610605 TGAGACACTTATTTTGGACGGA 57.389 40.909 0.00 0.00 0.00 4.69
3276 3413 5.682943 TTTGAGACACTTATTTTGGACGG 57.317 39.130 0.00 0.00 0.00 4.79
3277 3414 7.647715 ACAAATTTGAGACACTTATTTTGGACG 59.352 33.333 24.64 0.00 0.00 4.79
3278 3415 8.871686 ACAAATTTGAGACACTTATTTTGGAC 57.128 30.769 24.64 0.00 0.00 4.02
3279 3416 9.959749 GTACAAATTTGAGACACTTATTTTGGA 57.040 29.630 24.64 0.00 0.00 3.53
3280 3417 9.965824 AGTACAAATTTGAGACACTTATTTTGG 57.034 29.630 24.64 0.00 0.00 3.28
3286 3423 9.841295 AAGGTTAGTACAAATTTGAGACACTTA 57.159 29.630 24.64 11.80 0.00 2.24
3287 3424 8.747538 AAGGTTAGTACAAATTTGAGACACTT 57.252 30.769 24.64 17.54 0.00 3.16
3288 3425 9.490379 CTAAGGTTAGTACAAATTTGAGACACT 57.510 33.333 24.64 19.94 0.00 3.55
3289 3426 9.269453 ACTAAGGTTAGTACAAATTTGAGACAC 57.731 33.333 24.64 14.81 41.92 3.67
3315 3452 7.707893 GTGTCTCAACCTTAGTACAACTTTGTA 59.292 37.037 0.00 0.00 42.35 2.41
3316 3453 6.537660 GTGTCTCAACCTTAGTACAACTTTGT 59.462 38.462 0.00 0.00 44.86 2.83
3317 3454 6.292168 CGTGTCTCAACCTTAGTACAACTTTG 60.292 42.308 0.00 0.00 0.00 2.77
3318 3455 5.751990 CGTGTCTCAACCTTAGTACAACTTT 59.248 40.000 0.00 0.00 0.00 2.66
3319 3456 5.163478 ACGTGTCTCAACCTTAGTACAACTT 60.163 40.000 0.00 0.00 0.00 2.66
3320 3457 4.340381 ACGTGTCTCAACCTTAGTACAACT 59.660 41.667 0.00 0.00 0.00 3.16
3321 3458 4.614946 ACGTGTCTCAACCTTAGTACAAC 58.385 43.478 0.00 0.00 0.00 3.32
3322 3459 4.924305 ACGTGTCTCAACCTTAGTACAA 57.076 40.909 0.00 0.00 0.00 2.41
3323 3460 6.579666 AATACGTGTCTCAACCTTAGTACA 57.420 37.500 0.00 0.00 0.00 2.90
3324 3461 7.148689 CCAAAATACGTGTCTCAACCTTAGTAC 60.149 40.741 0.00 0.00 0.00 2.73
3325 3462 6.869913 CCAAAATACGTGTCTCAACCTTAGTA 59.130 38.462 0.00 0.00 0.00 1.82
3326 3463 5.699458 CCAAAATACGTGTCTCAACCTTAGT 59.301 40.000 0.00 0.00 0.00 2.24
3327 3464 5.121768 CCCAAAATACGTGTCTCAACCTTAG 59.878 44.000 0.00 0.00 0.00 2.18
3328 3465 4.998672 CCCAAAATACGTGTCTCAACCTTA 59.001 41.667 0.00 0.00 0.00 2.69
3329 3466 3.818773 CCCAAAATACGTGTCTCAACCTT 59.181 43.478 0.00 0.00 0.00 3.50
3330 3467 3.071892 TCCCAAAATACGTGTCTCAACCT 59.928 43.478 0.00 0.00 0.00 3.50
3331 3468 3.187842 GTCCCAAAATACGTGTCTCAACC 59.812 47.826 0.00 0.00 0.00 3.77
3332 3469 3.120786 CGTCCCAAAATACGTGTCTCAAC 60.121 47.826 0.00 0.00 34.48 3.18
3333 3470 3.061322 CGTCCCAAAATACGTGTCTCAA 58.939 45.455 0.00 0.00 34.48 3.02
3334 3471 2.610976 CCGTCCCAAAATACGTGTCTCA 60.611 50.000 0.00 0.00 37.40 3.27
3335 3472 1.997606 CCGTCCCAAAATACGTGTCTC 59.002 52.381 0.00 0.00 37.40 3.36
3336 3473 1.619827 TCCGTCCCAAAATACGTGTCT 59.380 47.619 0.00 0.00 37.40 3.41
3337 3474 1.997606 CTCCGTCCCAAAATACGTGTC 59.002 52.381 0.00 0.00 37.40 3.67
3338 3475 1.338389 CCTCCGTCCCAAAATACGTGT 60.338 52.381 0.00 0.00 37.40 4.49
3339 3476 1.365699 CCTCCGTCCCAAAATACGTG 58.634 55.000 0.00 0.00 37.40 4.49
3340 3477 0.251073 CCCTCCGTCCCAAAATACGT 59.749 55.000 0.00 0.00 37.40 3.57
3341 3478 0.538118 TCCCTCCGTCCCAAAATACG 59.462 55.000 0.00 0.00 38.80 3.06
3342 3479 1.558294 ACTCCCTCCGTCCCAAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
3343 3480 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3344 3481 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3345 3482 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
3346 3483 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
3347 3484 2.023695 ACTAATACTCCCTCCGTCCCAA 60.024 50.000 0.00 0.00 0.00 4.12
3348 3485 1.572415 ACTAATACTCCCTCCGTCCCA 59.428 52.381 0.00 0.00 0.00 4.37
3349 3486 2.378378 ACTAATACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
3350 3487 4.468713 AGTAACTAATACTCCCTCCGTCC 58.531 47.826 0.00 0.00 41.04 4.79
3351 3488 6.529220 TCTAGTAACTAATACTCCCTCCGTC 58.471 44.000 0.00 0.00 43.87 4.79
3352 3489 6.506538 TCTAGTAACTAATACTCCCTCCGT 57.493 41.667 0.00 0.00 43.87 4.69
3353 3490 7.999450 AATCTAGTAACTAATACTCCCTCCG 57.001 40.000 0.00 0.00 43.87 4.63
3464 3603 3.378512 ACTCACTCCAGGCAAGATATCA 58.621 45.455 5.32 0.00 0.00 2.15
3562 3701 7.246311 AGAATCACGCATGACAAATTTTAGAG 58.754 34.615 0.00 0.00 37.79 2.43
3579 3718 6.480524 TGTCACCTTCAAATAAGAATCACG 57.519 37.500 0.00 0.00 0.00 4.35
3644 3783 8.490311 TGAGTAATTACAATATCCATGTCACCA 58.510 33.333 17.65 0.00 32.27 4.17
3759 3898 5.012561 GGACCATAGAAGCATACATTCTCCT 59.987 44.000 0.00 0.00 38.05 3.69
3921 4061 9.225436 TGCAAGTTACAATGAGTTGATACAATA 57.775 29.630 0.00 0.00 38.71 1.90
3984 4125 7.064134 ACTGTTCTTGCATAAATACGAATCGAA 59.936 33.333 10.55 0.00 0.00 3.71
3987 4128 8.895932 AAACTGTTCTTGCATAAATACGAATC 57.104 30.769 0.00 0.00 0.00 2.52
4013 4154 7.413438 GCCTGATTCACAACTTCTTGTACTATG 60.413 40.741 0.00 0.00 38.66 2.23
4014 4155 6.595716 GCCTGATTCACAACTTCTTGTACTAT 59.404 38.462 0.00 0.00 38.66 2.12
4120 4261 7.491372 TCAATACTGTTTACGCTGAAGATAAGG 59.509 37.037 0.00 0.00 0.00 2.69
4133 4274 7.224167 GTGGCTACATACCTCAATACTGTTTAC 59.776 40.741 0.00 0.00 0.00 2.01
4296 4528 7.394816 TGCTAGCTAACTCAAACCTTCTTAAT 58.605 34.615 17.23 0.00 0.00 1.40
4319 4551 2.287427 CCTGCATTTCATCGAGGAATGC 60.287 50.000 26.00 26.00 34.65 3.56
4325 4557 2.353889 CAGTTCCCTGCATTTCATCGAG 59.646 50.000 0.00 0.00 0.00 4.04
4328 4560 3.084039 TGTCAGTTCCCTGCATTTCATC 58.916 45.455 0.00 0.00 38.66 2.92
4381 4613 1.227380 CAGCTCACGCCCAGGATAC 60.227 63.158 0.00 0.00 36.60 2.24
4414 4646 4.078639 GGAATCACTCCATACCTTGAGG 57.921 50.000 0.00 0.00 44.67 3.86
4449 4681 9.436957 AAAACGTCAATATAACTCTGATGTCTT 57.563 29.630 0.00 0.00 38.15 3.01
4450 4682 9.436957 AAAAACGTCAATATAACTCTGATGTCT 57.563 29.630 0.00 0.00 38.15 3.41
4493 4725 7.518731 TTTCAGTTCCAAAAGAAACAAATCG 57.481 32.000 0.00 0.00 35.85 3.34
4519 4751 3.262420 GCCGACATGAAGTGAACTATGT 58.738 45.455 0.00 0.00 36.54 2.29
4524 4756 0.438830 GACGCCGACATGAAGTGAAC 59.561 55.000 0.00 0.00 0.00 3.18
4529 4761 3.084579 GCAGACGCCGACATGAAG 58.915 61.111 0.00 0.00 0.00 3.02
4548 4780 5.250200 TGGGTATACCTGTCAACATCAAAC 58.750 41.667 21.25 0.33 41.11 2.93
4553 4785 4.108570 TCCTTGGGTATACCTGTCAACAT 58.891 43.478 21.25 0.00 41.11 2.71
4559 4791 3.798515 TCTGTTCCTTGGGTATACCTGT 58.201 45.455 21.25 0.00 41.11 4.00
4679 4911 7.654022 AGTTATTCCCAAAAGAACAAAGTCA 57.346 32.000 0.00 0.00 0.00 3.41
4686 4918 5.596845 TGCACAAGTTATTCCCAAAAGAAC 58.403 37.500 0.00 0.00 0.00 3.01
4696 4928 7.116090 TGCATGTTGTAATTGCACAAGTTATTC 59.884 33.333 0.00 0.00 41.18 1.75
4707 4939 5.643664 TCTCAATCTGCATGTTGTAATTGC 58.356 37.500 10.03 0.00 36.91 3.56
4821 5053 7.429340 CAGAATTGTAATAACCGATGAACAAGC 59.571 37.037 0.00 0.00 31.33 4.01
4829 5061 7.565680 AGGAAGACAGAATTGTAATAACCGAT 58.434 34.615 0.00 0.00 37.76 4.18
4901 5133 7.232534 CAGTTAACTATAGCTTCTGATCTCCCT 59.767 40.741 8.04 0.00 0.00 4.20
4998 5230 5.278957 GGCAAAGCTACATTTTCCTTCAGAA 60.279 40.000 0.00 0.00 0.00 3.02
5025 5257 3.503748 AGGAGAAGCAAAACTACACATGC 59.496 43.478 0.00 0.00 39.06 4.06
5027 5259 5.133221 ACAAGGAGAAGCAAAACTACACAT 58.867 37.500 0.00 0.00 0.00 3.21
5040 5272 0.741221 GCCTGCGGTACAAGGAGAAG 60.741 60.000 11.56 0.00 0.00 2.85
5042 5274 2.656069 GGCCTGCGGTACAAGGAGA 61.656 63.158 11.56 0.00 0.00 3.71
5043 5275 2.125106 GGCCTGCGGTACAAGGAG 60.125 66.667 11.56 7.27 0.00 3.69
5044 5276 4.077184 CGGCCTGCGGTACAAGGA 62.077 66.667 11.56 0.00 0.00 3.36
5061 5293 1.168714 CTTGGAAACAGCTACCAGCC 58.831 55.000 0.00 0.00 43.77 4.85
5081 5313 3.869948 CAACAAAGGTTTGCTGCACAGC 61.870 50.000 15.68 15.68 44.45 4.40
5087 5319 2.541588 CGTCTCCAACAAAGGTTTGCTG 60.542 50.000 2.27 0.94 41.79 4.41
5088 5320 1.676006 CGTCTCCAACAAAGGTTTGCT 59.324 47.619 2.27 0.00 41.79 3.91
5089 5321 1.269051 CCGTCTCCAACAAAGGTTTGC 60.269 52.381 2.27 0.00 41.79 3.68
5090 5322 2.021457 ACCGTCTCCAACAAAGGTTTG 58.979 47.619 0.77 0.77 43.62 2.93
5091 5323 2.430248 ACCGTCTCCAACAAAGGTTT 57.570 45.000 0.00 0.00 34.21 3.27
5092 5324 2.436911 ACTACCGTCTCCAACAAAGGTT 59.563 45.455 0.00 0.00 37.87 3.50
5094 5326 2.685100 GACTACCGTCTCCAACAAAGG 58.315 52.381 0.00 0.00 37.19 3.11
5105 5337 2.184579 GCCTGCCAGACTACCGTC 59.815 66.667 0.00 0.00 40.54 4.79
5106 5338 2.283966 AGCCTGCCAGACTACCGT 60.284 61.111 0.00 0.00 0.00 4.83
5107 5339 2.496817 GAGCCTGCCAGACTACCG 59.503 66.667 0.00 0.00 0.00 4.02
5108 5340 1.035932 TACGAGCCTGCCAGACTACC 61.036 60.000 0.00 0.00 0.00 3.18
5114 5346 0.747255 ACTATGTACGAGCCTGCCAG 59.253 55.000 0.00 0.00 0.00 4.85
5119 5351 3.955650 ACAACAACTATGTACGAGCCT 57.044 42.857 0.00 0.00 39.40 4.58
5122 5354 6.150318 ACAGAGAACAACAACTATGTACGAG 58.850 40.000 0.00 0.00 39.40 4.18
5128 5360 7.224753 ACAGTACAACAGAGAACAACAACTATG 59.775 37.037 0.00 0.00 0.00 2.23
5132 5364 5.796350 ACAGTACAACAGAGAACAACAAC 57.204 39.130 0.00 0.00 0.00 3.32
5157 5430 2.680339 GAGCAACATTCTCCTTACTGCC 59.320 50.000 0.00 0.00 0.00 4.85
5158 5431 3.338249 TGAGCAACATTCTCCTTACTGC 58.662 45.455 0.00 0.00 0.00 4.40
5164 5437 1.760192 GGCATGAGCAACATTCTCCT 58.240 50.000 0.00 0.00 44.61 3.69
5167 5440 0.961857 TGCGGCATGAGCAACATTCT 60.962 50.000 12.87 0.00 44.61 2.40
5179 5453 2.224597 TGTCCATAGATTCATGCGGCAT 60.225 45.455 10.23 10.23 0.00 4.40
5182 5457 3.470709 ACTTGTCCATAGATTCATGCGG 58.529 45.455 0.00 0.00 0.00 5.69
5195 5470 6.147164 CGACAAAATAGCTAGAAACTTGTCCA 59.853 38.462 19.67 0.00 38.49 4.02
5204 5479 5.335127 GGTCGTACGACAAAATAGCTAGAA 58.665 41.667 39.96 4.45 46.20 2.10
5206 5481 3.722780 CGGTCGTACGACAAAATAGCTAG 59.277 47.826 39.96 18.49 46.20 3.42
5209 5484 2.253603 ACGGTCGTACGACAAAATAGC 58.746 47.619 39.96 24.16 46.20 2.97
5219 5494 1.397567 GGCAAAGAAAACGGTCGTACG 60.398 52.381 9.53 9.53 40.31 3.67
5224 5501 2.616842 TGAGAAGGCAAAGAAAACGGTC 59.383 45.455 0.00 0.00 0.00 4.79
5243 5520 1.626686 AAAACCATCGTGGCCATTGA 58.373 45.000 9.72 11.42 42.67 2.57
5250 5527 3.971150 TGCAAAGTAAAAACCATCGTGG 58.029 40.909 2.92 2.92 45.02 4.94
5254 5531 5.328886 GCAGTTGCAAAGTAAAAACCATC 57.671 39.130 0.00 0.00 41.59 3.51
5283 5560 1.826340 TACTCCTGCTTTCGCCTGCA 61.826 55.000 0.00 0.00 37.63 4.41
5284 5561 0.462759 ATACTCCTGCTTTCGCCTGC 60.463 55.000 0.00 0.00 34.43 4.85
5287 5564 6.613755 TTTTATTATACTCCTGCTTTCGCC 57.386 37.500 0.00 0.00 34.43 5.54
5294 5571 9.057089 AGTGCTGTATTTTTATTATACTCCTGC 57.943 33.333 0.00 0.00 31.30 4.85
5297 5574 9.000486 GGGAGTGCTGTATTTTTATTATACTCC 58.000 37.037 0.00 0.00 45.96 3.85
5298 5575 9.780186 AGGGAGTGCTGTATTTTTATTATACTC 57.220 33.333 0.00 0.00 31.30 2.59
5299 5576 9.780186 GAGGGAGTGCTGTATTTTTATTATACT 57.220 33.333 0.00 0.00 31.30 2.12
5300 5577 9.780186 AGAGGGAGTGCTGTATTTTTATTATAC 57.220 33.333 0.00 0.00 0.00 1.47
5301 5578 9.778741 CAGAGGGAGTGCTGTATTTTTATTATA 57.221 33.333 0.00 0.00 0.00 0.98
5303 5580 7.857456 TCAGAGGGAGTGCTGTATTTTTATTA 58.143 34.615 0.00 0.00 33.90 0.98
5305 5582 6.313519 TCAGAGGGAGTGCTGTATTTTTAT 57.686 37.500 0.00 0.00 33.90 1.40
5306 5583 5.755409 TCAGAGGGAGTGCTGTATTTTTA 57.245 39.130 0.00 0.00 33.90 1.52
5307 5584 4.640771 TCAGAGGGAGTGCTGTATTTTT 57.359 40.909 0.00 0.00 33.90 1.94
5308 5585 4.640771 TTCAGAGGGAGTGCTGTATTTT 57.359 40.909 0.00 0.00 33.90 1.82
5309 5586 4.225942 TCATTCAGAGGGAGTGCTGTATTT 59.774 41.667 0.00 0.00 33.54 1.40
5310 5587 3.776969 TCATTCAGAGGGAGTGCTGTATT 59.223 43.478 0.00 0.00 33.54 1.89
5311 5588 3.378512 TCATTCAGAGGGAGTGCTGTAT 58.621 45.455 0.00 0.00 33.54 2.29
5313 5590 1.554160 CTCATTCAGAGGGAGTGCTGT 59.446 52.381 0.00 0.00 40.84 4.40
5315 5592 2.244486 TCTCATTCAGAGGGAGTGCT 57.756 50.000 0.00 0.00 44.81 4.40
5324 5601 8.712228 TCTATATTACTTGCCTCTCATTCAGA 57.288 34.615 0.00 0.00 0.00 3.27
5325 5602 9.585099 GATCTATATTACTTGCCTCTCATTCAG 57.415 37.037 0.00 0.00 0.00 3.02
5326 5603 8.246871 CGATCTATATTACTTGCCTCTCATTCA 58.753 37.037 0.00 0.00 0.00 2.57
5327 5604 8.462811 TCGATCTATATTACTTGCCTCTCATTC 58.537 37.037 0.00 0.00 0.00 2.67
5328 5605 8.354711 TCGATCTATATTACTTGCCTCTCATT 57.645 34.615 0.00 0.00 0.00 2.57
5329 5606 7.946381 TCGATCTATATTACTTGCCTCTCAT 57.054 36.000 0.00 0.00 0.00 2.90
5330 5607 7.094162 CCTTCGATCTATATTACTTGCCTCTCA 60.094 40.741 0.00 0.00 0.00 3.27
5331 5608 7.254852 CCTTCGATCTATATTACTTGCCTCTC 58.745 42.308 0.00 0.00 0.00 3.20
5332 5609 6.153680 CCCTTCGATCTATATTACTTGCCTCT 59.846 42.308 0.00 0.00 0.00 3.69
5333 5610 6.153000 TCCCTTCGATCTATATTACTTGCCTC 59.847 42.308 0.00 0.00 0.00 4.70
5334 5611 6.017192 TCCCTTCGATCTATATTACTTGCCT 58.983 40.000 0.00 0.00 0.00 4.75
5335 5612 6.071278 ACTCCCTTCGATCTATATTACTTGCC 60.071 42.308 0.00 0.00 0.00 4.52
5336 5613 6.926313 ACTCCCTTCGATCTATATTACTTGC 58.074 40.000 0.00 0.00 0.00 4.01
5337 5614 9.233649 ACTACTCCCTTCGATCTATATTACTTG 57.766 37.037 0.00 0.00 0.00 3.16
5345 5622 9.144298 TGAAATTTACTACTCCCTTCGATCTAT 57.856 33.333 0.00 0.00 0.00 1.98
5346 5623 8.529424 TGAAATTTACTACTCCCTTCGATCTA 57.471 34.615 0.00 0.00 0.00 1.98
5347 5624 7.342284 TCTGAAATTTACTACTCCCTTCGATCT 59.658 37.037 0.00 0.00 0.00 2.75
5348 5625 7.490000 TCTGAAATTTACTACTCCCTTCGATC 58.510 38.462 0.00 0.00 0.00 3.69
5349 5626 7.419711 TCTGAAATTTACTACTCCCTTCGAT 57.580 36.000 0.00 0.00 0.00 3.59
5350 5627 6.845758 TCTGAAATTTACTACTCCCTTCGA 57.154 37.500 0.00 0.00 0.00 3.71
5351 5628 7.900782 TTTCTGAAATTTACTACTCCCTTCG 57.099 36.000 0.00 0.00 0.00 3.79
5352 5629 9.063615 TGTTTTCTGAAATTTACTACTCCCTTC 57.936 33.333 3.31 0.00 0.00 3.46
5353 5630 8.990163 TGTTTTCTGAAATTTACTACTCCCTT 57.010 30.769 3.31 0.00 0.00 3.95
5354 5631 9.014297 CATGTTTTCTGAAATTTACTACTCCCT 57.986 33.333 3.31 0.00 0.00 4.20
5355 5632 7.755373 GCATGTTTTCTGAAATTTACTACTCCC 59.245 37.037 3.31 0.00 0.00 4.30
5356 5633 8.515414 AGCATGTTTTCTGAAATTTACTACTCC 58.485 33.333 3.31 0.00 0.00 3.85
5357 5634 9.334693 CAGCATGTTTTCTGAAATTTACTACTC 57.665 33.333 3.31 0.00 32.26 2.59
5358 5635 7.809806 GCAGCATGTTTTCTGAAATTTACTACT 59.190 33.333 3.31 0.00 39.31 2.57
5359 5636 7.809806 AGCAGCATGTTTTCTGAAATTTACTAC 59.190 33.333 3.31 0.00 39.31 2.73
5360 5637 7.885297 AGCAGCATGTTTTCTGAAATTTACTA 58.115 30.769 3.31 0.00 39.31 1.82
5361 5638 6.752168 AGCAGCATGTTTTCTGAAATTTACT 58.248 32.000 3.31 0.00 39.31 2.24
5362 5639 7.169645 TGAAGCAGCATGTTTTCTGAAATTTAC 59.830 33.333 3.31 0.31 40.56 2.01
5363 5640 7.208777 TGAAGCAGCATGTTTTCTGAAATTTA 58.791 30.769 3.31 0.00 40.56 1.40
5364 5641 6.050432 TGAAGCAGCATGTTTTCTGAAATTT 58.950 32.000 3.31 0.00 40.56 1.82
5365 5642 5.603596 TGAAGCAGCATGTTTTCTGAAATT 58.396 33.333 3.31 0.00 40.56 1.82
5366 5643 5.010314 TCTGAAGCAGCATGTTTTCTGAAAT 59.990 36.000 3.31 0.00 40.56 2.17
5367 5644 4.338964 TCTGAAGCAGCATGTTTTCTGAAA 59.661 37.500 0.00 0.00 40.56 2.69
5368 5645 3.884693 TCTGAAGCAGCATGTTTTCTGAA 59.115 39.130 0.00 0.00 40.56 3.02
5369 5646 3.479489 TCTGAAGCAGCATGTTTTCTGA 58.521 40.909 0.00 1.86 40.56 3.27
5370 5647 3.909776 TCTGAAGCAGCATGTTTTCTG 57.090 42.857 0.00 0.00 40.56 3.02
5371 5648 6.152323 ACATTATCTGAAGCAGCATGTTTTCT 59.848 34.615 0.00 0.00 40.56 2.52
5372 5649 6.327934 ACATTATCTGAAGCAGCATGTTTTC 58.672 36.000 0.00 0.00 40.56 2.29
5373 5650 6.276832 ACATTATCTGAAGCAGCATGTTTT 57.723 33.333 0.00 0.00 40.56 2.43
5374 5651 5.909621 ACATTATCTGAAGCAGCATGTTT 57.090 34.783 0.00 0.00 44.25 2.83
5375 5652 5.008415 GCTACATTATCTGAAGCAGCATGTT 59.992 40.000 0.00 0.00 39.31 2.71
5376 5653 4.514441 GCTACATTATCTGAAGCAGCATGT 59.486 41.667 0.00 0.00 39.31 3.21
5377 5654 4.377124 CGCTACATTATCTGAAGCAGCATG 60.377 45.833 0.00 0.00 40.87 4.06
5378 5655 3.744942 CGCTACATTATCTGAAGCAGCAT 59.255 43.478 0.00 0.00 32.69 3.79
5379 5656 3.126073 CGCTACATTATCTGAAGCAGCA 58.874 45.455 0.00 0.00 32.69 4.41
5380 5657 3.060003 CACGCTACATTATCTGAAGCAGC 60.060 47.826 0.00 0.00 32.69 5.25
5381 5658 4.363138 TCACGCTACATTATCTGAAGCAG 58.637 43.478 0.00 0.00 32.69 4.24
5382 5659 4.142160 ACTCACGCTACATTATCTGAAGCA 60.142 41.667 0.00 0.00 32.69 3.91
5383 5660 4.208047 CACTCACGCTACATTATCTGAAGC 59.792 45.833 0.00 0.00 0.00 3.86
5384 5661 4.208047 GCACTCACGCTACATTATCTGAAG 59.792 45.833 0.00 0.00 0.00 3.02
5385 5662 4.112634 GCACTCACGCTACATTATCTGAA 58.887 43.478 0.00 0.00 0.00 3.02
5386 5663 3.490933 GGCACTCACGCTACATTATCTGA 60.491 47.826 0.00 0.00 0.00 3.27
5387 5664 2.797156 GGCACTCACGCTACATTATCTG 59.203 50.000 0.00 0.00 0.00 2.90
5388 5665 2.430694 TGGCACTCACGCTACATTATCT 59.569 45.455 0.00 0.00 0.00 1.98
5389 5666 2.821546 TGGCACTCACGCTACATTATC 58.178 47.619 0.00 0.00 0.00 1.75
5390 5667 2.979814 TGGCACTCACGCTACATTAT 57.020 45.000 0.00 0.00 0.00 1.28
5391 5668 2.979814 ATGGCACTCACGCTACATTA 57.020 45.000 0.00 0.00 0.00 1.90
5392 5669 2.979814 TATGGCACTCACGCTACATT 57.020 45.000 0.00 0.00 0.00 2.71
5393 5670 2.979814 TTATGGCACTCACGCTACAT 57.020 45.000 0.00 0.00 0.00 2.29
5394 5671 2.979814 ATTATGGCACTCACGCTACA 57.020 45.000 0.00 0.00 0.00 2.74
5395 5672 3.194861 TGAATTATGGCACTCACGCTAC 58.805 45.455 0.00 0.00 0.00 3.58
5396 5673 3.535280 TGAATTATGGCACTCACGCTA 57.465 42.857 0.00 0.00 0.00 4.26
5397 5674 2.401583 TGAATTATGGCACTCACGCT 57.598 45.000 0.00 0.00 0.00 5.07
5398 5675 3.809832 ACTATGAATTATGGCACTCACGC 59.190 43.478 0.00 0.00 0.00 5.34
5399 5676 5.983118 TGTACTATGAATTATGGCACTCACG 59.017 40.000 0.00 0.00 0.00 4.35
5400 5677 7.657354 TGATGTACTATGAATTATGGCACTCAC 59.343 37.037 0.00 0.00 0.00 3.51
5401 5678 7.657354 GTGATGTACTATGAATTATGGCACTCA 59.343 37.037 0.00 0.00 0.00 3.41
5402 5679 7.657354 TGTGATGTACTATGAATTATGGCACTC 59.343 37.037 0.00 0.00 0.00 3.51
5403 5680 7.508687 TGTGATGTACTATGAATTATGGCACT 58.491 34.615 0.00 0.00 0.00 4.40
5404 5681 7.095060 CCTGTGATGTACTATGAATTATGGCAC 60.095 40.741 0.00 0.00 0.00 5.01
5405 5682 6.936335 CCTGTGATGTACTATGAATTATGGCA 59.064 38.462 0.00 0.00 0.00 4.92
5406 5683 6.372659 CCCTGTGATGTACTATGAATTATGGC 59.627 42.308 0.00 0.00 0.00 4.40
5407 5684 7.453393 ACCCTGTGATGTACTATGAATTATGG 58.547 38.462 0.00 0.00 0.00 2.74
5408 5685 8.370940 AGACCCTGTGATGTACTATGAATTATG 58.629 37.037 0.00 0.00 0.00 1.90
5409 5686 8.497910 AGACCCTGTGATGTACTATGAATTAT 57.502 34.615 0.00 0.00 0.00 1.28
5410 5687 7.914427 AGACCCTGTGATGTACTATGAATTA 57.086 36.000 0.00 0.00 0.00 1.40
5411 5688 6.814954 AGACCCTGTGATGTACTATGAATT 57.185 37.500 0.00 0.00 0.00 2.17
5412 5689 6.461648 CGAAGACCCTGTGATGTACTATGAAT 60.462 42.308 0.00 0.00 0.00 2.57
5413 5690 5.163550 CGAAGACCCTGTGATGTACTATGAA 60.164 44.000 0.00 0.00 0.00 2.57
5414 5691 4.338400 CGAAGACCCTGTGATGTACTATGA 59.662 45.833 0.00 0.00 0.00 2.15
5415 5692 4.499865 CCGAAGACCCTGTGATGTACTATG 60.500 50.000 0.00 0.00 0.00 2.23
5416 5693 3.637229 CCGAAGACCCTGTGATGTACTAT 59.363 47.826 0.00 0.00 0.00 2.12
5417 5694 3.021695 CCGAAGACCCTGTGATGTACTA 58.978 50.000 0.00 0.00 0.00 1.82
5418 5695 1.825474 CCGAAGACCCTGTGATGTACT 59.175 52.381 0.00 0.00 0.00 2.73
5419 5696 1.739371 GCCGAAGACCCTGTGATGTAC 60.739 57.143 0.00 0.00 0.00 2.90
5420 5697 0.535335 GCCGAAGACCCTGTGATGTA 59.465 55.000 0.00 0.00 0.00 2.29
5421 5698 1.296715 GCCGAAGACCCTGTGATGT 59.703 57.895 0.00 0.00 0.00 3.06
5422 5699 0.321564 TTGCCGAAGACCCTGTGATG 60.322 55.000 0.00 0.00 0.00 3.07
5423 5700 0.321653 GTTGCCGAAGACCCTGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
5424 5701 1.070786 GTTGCCGAAGACCCTGTGA 59.929 57.895 0.00 0.00 0.00 3.58
5425 5702 0.320374 TAGTTGCCGAAGACCCTGTG 59.680 55.000 0.00 0.00 0.00 3.66
5426 5703 1.066143 CATAGTTGCCGAAGACCCTGT 60.066 52.381 0.00 0.00 0.00 4.00
5427 5704 1.656652 CATAGTTGCCGAAGACCCTG 58.343 55.000 0.00 0.00 0.00 4.45
5428 5705 0.107654 GCATAGTTGCCGAAGACCCT 60.108 55.000 0.00 0.00 43.38 4.34
5429 5706 2.394604 GCATAGTTGCCGAAGACCC 58.605 57.895 0.00 0.00 43.38 4.46
5439 5716 6.240894 ACACCATCTTATATGGGCATAGTTG 58.759 40.000 8.78 0.00 43.32 3.16
5440 5717 6.454223 ACACCATCTTATATGGGCATAGTT 57.546 37.500 8.78 0.00 43.32 2.24
5441 5718 6.454223 AACACCATCTTATATGGGCATAGT 57.546 37.500 8.78 0.00 43.32 2.12
5442 5719 7.448161 TGAAAACACCATCTTATATGGGCATAG 59.552 37.037 8.78 0.00 43.32 2.23
5447 5724 6.364701 TCCTGAAAACACCATCTTATATGGG 58.635 40.000 8.78 1.01 43.32 4.00
5468 5746 7.255277 GGCGCATTTCTTTCTTATTAGATTCCT 60.255 37.037 10.83 0.00 0.00 3.36
5474 5752 9.226345 CTTTAAGGCGCATTTCTTTCTTATTAG 57.774 33.333 14.42 3.84 0.00 1.73
5478 5756 6.205853 TGACTTTAAGGCGCATTTCTTTCTTA 59.794 34.615 14.42 3.33 0.00 2.10
5508 5786 7.413000 CGTCCTTTGTTGATGGTTATTCTGTAG 60.413 40.741 0.00 0.00 0.00 2.74
5519 5797 1.165270 GGACCGTCCTTTGTTGATGG 58.835 55.000 10.59 0.00 43.30 3.51
5520 5798 1.890876 TGGACCGTCCTTTGTTGATG 58.109 50.000 18.54 0.00 37.46 3.07
5528 5806 0.106918 TGCAACTTTGGACCGTCCTT 60.107 50.000 18.54 1.60 37.46 3.36
5529 5807 0.535102 CTGCAACTTTGGACCGTCCT 60.535 55.000 18.54 0.00 37.46 3.85
5534 5812 0.463620 TTTGCCTGCAACTTTGGACC 59.536 50.000 3.64 0.00 35.46 4.46
5555 5833 4.271696 TCTCAAGATTTGACCGTGACAT 57.728 40.909 0.00 0.00 35.46 3.06
5556 5834 3.744238 TCTCAAGATTTGACCGTGACA 57.256 42.857 0.00 0.00 35.46 3.58
5557 5835 4.511826 AGTTTCTCAAGATTTGACCGTGAC 59.488 41.667 0.00 0.00 35.46 3.67
5558 5836 4.703897 AGTTTCTCAAGATTTGACCGTGA 58.296 39.130 0.00 0.00 35.46 4.35
5559 5837 5.007626 TCAAGTTTCTCAAGATTTGACCGTG 59.992 40.000 0.00 0.00 35.46 4.94
5560 5838 5.007724 GTCAAGTTTCTCAAGATTTGACCGT 59.992 40.000 14.96 0.00 35.99 4.83
5561 5839 5.007626 TGTCAAGTTTCTCAAGATTTGACCG 59.992 40.000 19.14 0.00 38.29 4.79
5564 5842 6.460123 GGCTTGTCAAGTTTCTCAAGATTTGA 60.460 38.462 14.03 0.00 39.39 2.69
5567 5845 4.279420 GGGCTTGTCAAGTTTCTCAAGATT 59.721 41.667 14.03 0.00 39.39 2.40
5600 5878 2.090760 TCACAGTGCAACAAGCTTTGA 58.909 42.857 0.00 0.00 45.94 2.69
5607 5885 3.146066 GGGTTATCTCACAGTGCAACAA 58.854 45.455 0.00 0.00 41.43 2.83
5626 5904 2.621668 GGGGAGAGTTTTTGGATCTGGG 60.622 54.545 0.00 0.00 0.00 4.45
5665 5943 5.701290 ACTTTGCGTGCTAACTTTTAGATCT 59.299 36.000 0.00 0.00 0.00 2.75
5714 5994 1.604593 GGCTGGGATGCGGCATATT 60.605 57.895 16.66 0.00 0.00 1.28
5721 6001 4.790962 AGTGCTGGCTGGGATGCG 62.791 66.667 0.00 0.00 0.00 4.73
5765 6045 6.378710 AGTTTGACTTAAGCCTGAAACTTC 57.621 37.500 1.29 0.00 31.26 3.01
5771 6051 5.298989 TGGTTAGTTTGACTTAAGCCTGA 57.701 39.130 1.29 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.