Multiple sequence alignment - TraesCS7B01G098600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G098600 chr7B 100.000 3558 0 0 1 3558 113194640 113198197 0.000000e+00 6571.0
1 TraesCS7B01G098600 chr7B 80.479 292 49 8 19 306 100223449 100223162 2.150000e-52 217.0
2 TraesCS7B01G098600 chr7A 88.163 1377 76 38 691 2020 150987161 150988497 0.000000e+00 1559.0
3 TraesCS7B01G098600 chr7A 88.000 925 67 23 2067 2966 150988500 150989405 0.000000e+00 1053.0
4 TraesCS7B01G098600 chr7A 95.455 88 4 0 331 418 70252343 70252430 1.330000e-29 141.0
5 TraesCS7B01G098600 chr7A 79.006 181 32 5 331 508 4558944 4559121 6.240000e-23 119.0
6 TraesCS7B01G098600 chr7A 94.444 72 4 0 1587 1658 107668406 107668335 1.040000e-20 111.0
7 TraesCS7B01G098600 chr7A 94.444 72 4 0 1587 1658 652373912 652373983 1.040000e-20 111.0
8 TraesCS7B01G098600 chr7D 85.392 1376 130 39 1709 3056 151316353 151317685 0.000000e+00 1362.0
9 TraesCS7B01G098600 chr7D 90.041 974 47 14 727 1666 151314157 151315114 0.000000e+00 1216.0
10 TraesCS7B01G098600 chr7D 82.949 217 23 5 3343 3558 151317887 151318090 2.180000e-42 183.0
11 TraesCS7B01G098600 chr7D 86.813 91 9 3 605 693 36064263 36064174 8.130000e-17 99.0
12 TraesCS7B01G098600 chr1D 88.889 306 34 0 1 306 100659320 100659625 9.320000e-101 377.0
13 TraesCS7B01G098600 chr1A 85.294 306 43 2 1 306 540209858 540210161 7.410000e-82 315.0
14 TraesCS7B01G098600 chr1A 86.716 271 23 7 332 591 540210331 540210599 4.490000e-74 289.0
15 TraesCS7B01G098600 chr1A 74.590 366 55 16 330 684 21342441 21342779 3.730000e-25 126.0
16 TraesCS7B01G098600 chr5B 84.775 289 42 2 18 305 604739883 604739596 4.490000e-74 289.0
17 TraesCS7B01G098600 chr5B 93.056 72 5 0 1587 1658 531179837 531179766 4.860000e-19 106.0
18 TraesCS7B01G098600 chr5D 84.083 289 44 2 18 305 501055108 501054821 9.730000e-71 278.0
19 TraesCS7B01G098600 chr5D 75.749 367 45 21 331 684 448169308 448168973 1.030000e-30 145.0
20 TraesCS7B01G098600 chr4D 81.944 288 49 2 19 305 470968383 470968098 1.280000e-59 241.0
21 TraesCS7B01G098600 chr3B 81.443 291 46 7 19 306 659799588 659799873 7.680000e-57 231.0
22 TraesCS7B01G098600 chr3B 78.309 272 41 13 331 591 5363373 5363109 3.680000e-35 159.0
23 TraesCS7B01G098600 chr3B 85.106 94 9 3 605 694 529674020 529674112 1.360000e-14 91.6
24 TraesCS7B01G098600 chr2A 80.623 289 54 2 19 306 644060999 644060712 4.620000e-54 222.0
25 TraesCS7B01G098600 chr2A 82.114 246 34 7 1709 1951 63680274 63680512 6.020000e-48 202.0
26 TraesCS7B01G098600 chr2A 75.431 232 42 14 370 594 78555706 78555483 8.130000e-17 99.0
27 TraesCS7B01G098600 chr6A 82.117 274 34 7 334 594 588412045 588411774 1.660000e-53 220.0
28 TraesCS7B01G098600 chr5A 79.935 309 53 9 3 306 594984246 594984550 5.980000e-53 219.0
29 TraesCS7B01G098600 chr5A 82.114 246 34 7 1709 1951 660302448 660302686 6.020000e-48 202.0
30 TraesCS7B01G098600 chr5A 81.707 246 35 7 1709 1951 6907050 6906812 2.800000e-46 196.0
31 TraesCS7B01G098600 chr5A 84.259 108 16 1 348 455 391774585 391774479 1.750000e-18 104.0
32 TraesCS7B01G098600 chr2D 82.677 254 32 4 334 576 108630125 108629873 7.740000e-52 215.0
33 TraesCS7B01G098600 chr2D 80.608 263 39 11 331 584 607087944 607087685 3.620000e-45 193.0
34 TraesCS7B01G098600 chr2D 78.467 274 44 13 331 593 433686703 433686434 7.900000e-37 165.0
35 TraesCS7B01G098600 chr2D 86.735 98 8 5 605 699 636588991 636588896 1.750000e-18 104.0
36 TraesCS7B01G098600 chr4A 84.615 208 25 5 1709 1916 216407012 216406812 2.170000e-47 200.0
37 TraesCS7B01G098600 chr4A 84.211 133 19 2 331 462 661428208 661428077 1.040000e-25 128.0
38 TraesCS7B01G098600 chr4A 93.056 72 5 0 1587 1658 660154157 660154086 4.860000e-19 106.0
39 TraesCS7B01G098600 chr4A 88.889 81 8 1 604 684 723608455 723608534 8.130000e-17 99.0
40 TraesCS7B01G098600 chr4A 84.615 91 14 0 605 695 703690200 703690290 1.360000e-14 91.6
41 TraesCS7B01G098600 chr3D 77.992 259 43 10 334 581 582707768 582707513 2.210000e-32 150.0
42 TraesCS7B01G098600 chrUn 94.444 72 4 0 1587 1658 468338716 468338645 1.040000e-20 111.0
43 TraesCS7B01G098600 chr4B 94.444 72 4 0 1587 1658 154977939 154977868 1.040000e-20 111.0
44 TraesCS7B01G098600 chr3A 94.286 70 4 0 1587 1656 22386211 22386142 1.350000e-19 108.0
45 TraesCS7B01G098600 chr6B 97.297 37 1 0 3139 3175 36358719 36358755 2.970000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G098600 chr7B 113194640 113198197 3557 False 6571.000000 6571 100.000000 1 3558 1 chr7B.!!$F1 3557
1 TraesCS7B01G098600 chr7A 150987161 150989405 2244 False 1306.000000 1559 88.081500 691 2966 2 chr7A.!!$F4 2275
2 TraesCS7B01G098600 chr7D 151314157 151318090 3933 False 920.333333 1362 86.127333 727 3558 3 chr7D.!!$F1 2831
3 TraesCS7B01G098600 chr1A 540209858 540210599 741 False 302.000000 315 86.005000 1 591 2 chr1A.!!$F2 590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.178068 TGTGCTCCCTTATCTTCGGC 59.822 55.0 0.00 0.0 0.0 5.54 F
1609 1817 0.179051 CCAGATTCAGAGCAGGCTCC 60.179 60.0 17.16 2.3 43.7 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1952 3371 0.040058 TGCTTGCCCATCCTTCACAT 59.960 50.0 0.0 0.0 0.0 3.21 R
2940 4391 0.031994 GCAGGCAAAAATGTCACGGT 59.968 50.0 0.0 0.0 0.0 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.808945 CGCCAAGTCTTTGATCTGCTT 59.191 47.619 0.00 0.00 36.36 3.91
30 31 4.458295 CCAAGTCTTTGATCTGCTTCATGT 59.542 41.667 0.00 0.00 36.36 3.21
32 33 6.444633 CAAGTCTTTGATCTGCTTCATGTTT 58.555 36.000 0.00 0.00 36.36 2.83
35 36 3.581024 TTGATCTGCTTCATGTTTGCC 57.419 42.857 0.00 0.00 0.00 4.52
37 38 2.751259 TGATCTGCTTCATGTTTGCCTC 59.249 45.455 0.00 0.00 0.00 4.70
53 54 1.101635 CCTCCTCGATCTGTACGCCA 61.102 60.000 0.00 0.00 0.00 5.69
74 75 0.317479 CGAGTTCCGGTGTTCCTCTT 59.683 55.000 0.00 0.00 33.91 2.85
75 76 1.542915 CGAGTTCCGGTGTTCCTCTTA 59.457 52.381 0.00 0.00 33.91 2.10
76 77 2.029649 CGAGTTCCGGTGTTCCTCTTAA 60.030 50.000 0.00 0.00 33.91 1.85
81 82 4.903045 TCCGGTGTTCCTCTTAAAGATT 57.097 40.909 0.00 0.00 0.00 2.40
86 87 5.932303 CGGTGTTCCTCTTAAAGATTTCTGA 59.068 40.000 0.00 0.00 0.00 3.27
89 90 7.391833 GGTGTTCCTCTTAAAGATTTCTGATGT 59.608 37.037 0.00 0.00 0.00 3.06
100 101 4.456911 AGATTTCTGATGTTTGACGCATGT 59.543 37.500 0.00 0.00 0.00 3.21
122 123 6.062095 TGTCGTCACTGGATATCTAGATCAA 58.938 40.000 21.71 0.00 0.00 2.57
150 151 0.527817 CGGTCGTGTGCTCCCTTATC 60.528 60.000 0.00 0.00 0.00 1.75
151 152 0.824759 GGTCGTGTGCTCCCTTATCT 59.175 55.000 0.00 0.00 0.00 1.98
154 155 1.134367 TCGTGTGCTCCCTTATCTTCG 59.866 52.381 0.00 0.00 0.00 3.79
156 157 0.178068 TGTGCTCCCTTATCTTCGGC 59.822 55.000 0.00 0.00 0.00 5.54
161 162 2.565841 CTCCCTTATCTTCGGCCAAAG 58.434 52.381 2.24 0.00 0.00 2.77
176 177 1.684248 CCAAAGAGGCTTCATGAGGGG 60.684 57.143 6.99 0.00 0.00 4.79
180 181 1.229951 AGGCTTCATGAGGGGGTGA 60.230 57.895 6.99 0.00 0.00 4.02
237 238 6.939163 GGACATGTCTAAGCATAGATTTCCAT 59.061 38.462 24.50 0.00 40.21 3.41
246 247 5.700722 GCATAGATTTCCATGCATTGAGA 57.299 39.130 0.00 0.00 45.51 3.27
247 248 6.080648 GCATAGATTTCCATGCATTGAGAA 57.919 37.500 0.00 0.00 45.51 2.87
252 253 4.459390 TTTCCATGCATTGAGAATGGTG 57.541 40.909 0.00 0.00 41.41 4.17
254 255 3.905968 TCCATGCATTGAGAATGGTGAT 58.094 40.909 0.00 0.00 41.41 3.06
269 270 2.754552 TGGTGATGAAAGTTATGGCAGC 59.245 45.455 0.00 0.00 0.00 5.25
272 273 2.424601 TGATGAAAGTTATGGCAGCTGC 59.575 45.455 30.88 30.88 41.14 5.25
277 278 0.877649 AGTTATGGCAGCTGCGATCG 60.878 55.000 35.30 11.69 43.26 3.69
291 292 1.502231 CGATCGGAGGCTTGTAATGG 58.498 55.000 7.38 0.00 0.00 3.16
294 295 2.180204 CGGAGGCTTGTAATGGCGG 61.180 63.158 0.00 0.00 41.67 6.13
295 296 1.223487 GGAGGCTTGTAATGGCGGA 59.777 57.895 0.00 0.00 41.67 5.54
306 307 2.586648 AATGGCGGAGAGGAGTTTTT 57.413 45.000 0.00 0.00 0.00 1.94
308 309 0.250727 TGGCGGAGAGGAGTTTTTGG 60.251 55.000 0.00 0.00 0.00 3.28
309 310 1.587043 GGCGGAGAGGAGTTTTTGGC 61.587 60.000 0.00 0.00 0.00 4.52
311 312 1.604604 CGGAGAGGAGTTTTTGGCAA 58.395 50.000 0.00 0.00 0.00 4.52
312 313 2.162681 CGGAGAGGAGTTTTTGGCAAT 58.837 47.619 0.00 0.00 0.00 3.56
313 314 2.095059 CGGAGAGGAGTTTTTGGCAATG 60.095 50.000 0.00 0.00 0.00 2.82
314 315 2.232208 GGAGAGGAGTTTTTGGCAATGG 59.768 50.000 0.00 0.00 0.00 3.16
315 316 1.620323 AGAGGAGTTTTTGGCAATGGC 59.380 47.619 0.00 0.00 40.13 4.40
328 329 1.072173 GCAATGGCCTTTTTGAACCCT 59.928 47.619 3.32 0.00 0.00 4.34
329 330 2.487086 GCAATGGCCTTTTTGAACCCTT 60.487 45.455 3.32 0.00 0.00 3.95
330 331 3.819368 CAATGGCCTTTTTGAACCCTTT 58.181 40.909 3.32 0.00 0.00 3.11
338 483 2.926778 TTTGAACCCTTTGGCAATGG 57.073 45.000 21.85 21.85 33.59 3.16
392 537 5.504173 CGGTCTTTCTTCAAGGTGAAAACTC 60.504 44.000 0.00 0.00 35.73 3.01
399 544 6.356556 TCTTCAAGGTGAAAACTCAAGATCA 58.643 36.000 0.00 0.00 35.73 2.92
412 557 1.528586 CAAGATCATTGATCGGGCGAC 59.471 52.381 18.52 0.00 43.17 5.19
413 558 0.752658 AGATCATTGATCGGGCGACA 59.247 50.000 18.52 0.00 43.17 4.35
438 583 3.520569 ACGCTTGTGCATTGTTTTCTTT 58.479 36.364 0.00 0.00 39.64 2.52
463 609 1.503818 GGCGTCGCTTTGAAGAACCA 61.504 55.000 18.11 0.00 0.00 3.67
493 639 4.134563 GGTATGAGTGTTGTCTTTGGTGT 58.865 43.478 0.00 0.00 0.00 4.16
500 646 4.157105 AGTGTTGTCTTTGGTGTTGGTTAC 59.843 41.667 0.00 0.00 0.00 2.50
510 665 4.193090 TGGTGTTGGTTACAGTGTTAGTG 58.807 43.478 0.00 0.00 37.45 2.74
527 682 2.771089 AGTGTTTCATCACTGCGACAT 58.229 42.857 0.00 0.00 45.40 3.06
529 684 2.480037 GTGTTTCATCACTGCGACATGA 59.520 45.455 0.00 0.00 35.68 3.07
532 687 2.965572 TCATCACTGCGACATGATCA 57.034 45.000 0.00 0.00 33.18 2.92
536 691 1.667212 TCACTGCGACATGATCATTGC 59.333 47.619 5.16 11.07 0.00 3.56
541 696 4.395854 ACTGCGACATGATCATTGCTTTTA 59.604 37.500 19.46 4.70 0.00 1.52
542 697 5.066893 ACTGCGACATGATCATTGCTTTTAT 59.933 36.000 19.46 4.37 0.00 1.40
578 734 8.507470 TTTTTATTTTGTTTTTGGTTGTGTGC 57.493 26.923 0.00 0.00 0.00 4.57
580 736 5.893897 ATTTTGTTTTTGGTTGTGTGCAT 57.106 30.435 0.00 0.00 0.00 3.96
581 737 5.695851 TTTTGTTTTTGGTTGTGTGCATT 57.304 30.435 0.00 0.00 0.00 3.56
585 741 4.180057 GTTTTTGGTTGTGTGCATTCTGA 58.820 39.130 0.00 0.00 0.00 3.27
591 747 3.254166 GGTTGTGTGCATTCTGAATGTCT 59.746 43.478 26.22 0.00 41.01 3.41
592 748 4.261741 GGTTGTGTGCATTCTGAATGTCTT 60.262 41.667 26.22 0.00 41.01 3.01
593 749 5.284079 GTTGTGTGCATTCTGAATGTCTTT 58.716 37.500 26.22 0.00 41.01 2.52
594 750 5.518848 TGTGTGCATTCTGAATGTCTTTT 57.481 34.783 26.22 0.00 41.01 2.27
595 751 5.522456 TGTGTGCATTCTGAATGTCTTTTC 58.478 37.500 26.22 12.57 41.01 2.29
596 752 5.300034 TGTGTGCATTCTGAATGTCTTTTCT 59.700 36.000 26.22 0.00 41.01 2.52
597 753 5.855395 GTGTGCATTCTGAATGTCTTTTCTC 59.145 40.000 26.22 12.85 41.01 2.87
598 754 5.084722 GTGCATTCTGAATGTCTTTTCTCG 58.915 41.667 26.22 3.11 41.01 4.04
599 755 4.996758 TGCATTCTGAATGTCTTTTCTCGA 59.003 37.500 26.22 3.70 41.01 4.04
600 756 5.469760 TGCATTCTGAATGTCTTTTCTCGAA 59.530 36.000 26.22 3.15 41.01 3.71
601 757 6.149973 TGCATTCTGAATGTCTTTTCTCGAAT 59.850 34.615 26.22 0.00 41.01 3.34
602 758 7.334171 TGCATTCTGAATGTCTTTTCTCGAATA 59.666 33.333 26.22 2.19 41.01 1.75
603 759 8.341173 GCATTCTGAATGTCTTTTCTCGAATAT 58.659 33.333 26.22 0.00 41.01 1.28
607 763 9.698309 TCTGAATGTCTTTTCTCGAATATATCC 57.302 33.333 0.00 0.00 0.00 2.59
608 764 9.703892 CTGAATGTCTTTTCTCGAATATATCCT 57.296 33.333 0.00 0.00 0.00 3.24
609 765 9.481340 TGAATGTCTTTTCTCGAATATATCCTG 57.519 33.333 0.00 0.00 0.00 3.86
610 766 9.698309 GAATGTCTTTTCTCGAATATATCCTGA 57.302 33.333 0.00 0.00 0.00 3.86
613 769 9.481340 TGTCTTTTCTCGAATATATCCTGAATG 57.519 33.333 0.00 0.00 0.00 2.67
614 770 9.482627 GTCTTTTCTCGAATATATCCTGAATGT 57.517 33.333 0.00 0.00 0.00 2.71
615 771 9.698309 TCTTTTCTCGAATATATCCTGAATGTC 57.302 33.333 0.00 0.00 0.00 3.06
616 772 9.703892 CTTTTCTCGAATATATCCTGAATGTCT 57.296 33.333 0.00 0.00 0.00 3.41
619 775 9.698309 TTCTCGAATATATCCTGAATGTCTTTC 57.302 33.333 0.00 0.00 34.72 2.62
620 776 8.023706 TCTCGAATATATCCTGAATGTCTTTCG 58.976 37.037 0.00 0.00 37.13 3.46
621 777 7.882179 TCGAATATATCCTGAATGTCTTTCGA 58.118 34.615 0.00 0.00 37.13 3.71
622 778 7.808381 TCGAATATATCCTGAATGTCTTTCGAC 59.192 37.037 0.00 0.00 40.64 4.20
635 791 5.927030 TGTCTTTCGACATCTTATTTGTGC 58.073 37.500 0.00 0.00 44.85 4.57
636 792 5.468409 TGTCTTTCGACATCTTATTTGTGCA 59.532 36.000 0.00 0.00 44.85 4.57
637 793 6.017933 GTCTTTCGACATCTTATTTGTGCAG 58.982 40.000 0.00 0.00 39.98 4.41
638 794 4.944962 TTCGACATCTTATTTGTGCAGG 57.055 40.909 0.00 0.00 0.00 4.85
639 795 3.270027 TCGACATCTTATTTGTGCAGGG 58.730 45.455 0.00 0.00 0.00 4.45
640 796 2.355756 CGACATCTTATTTGTGCAGGGG 59.644 50.000 0.00 0.00 0.00 4.79
641 797 2.099756 GACATCTTATTTGTGCAGGGGC 59.900 50.000 0.00 0.00 41.68 5.80
642 798 2.291800 ACATCTTATTTGTGCAGGGGCT 60.292 45.455 0.00 0.00 41.91 5.19
643 799 1.838112 TCTTATTTGTGCAGGGGCTG 58.162 50.000 0.00 0.00 41.91 4.85
644 800 0.819582 CTTATTTGTGCAGGGGCTGG 59.180 55.000 0.00 0.00 41.91 4.85
645 801 0.614415 TTATTTGTGCAGGGGCTGGG 60.614 55.000 0.00 0.00 41.91 4.45
646 802 1.799157 TATTTGTGCAGGGGCTGGGT 61.799 55.000 0.00 0.00 41.91 4.51
647 803 3.964153 TATTTGTGCAGGGGCTGGGTG 62.964 57.143 0.00 0.00 41.91 4.61
649 805 3.646715 GTGCAGGGGCTGGGTGTA 61.647 66.667 0.00 0.00 41.91 2.90
650 806 2.856494 TGCAGGGGCTGGGTGTAA 60.856 61.111 0.00 0.00 41.91 2.41
651 807 2.237965 TGCAGGGGCTGGGTGTAAT 61.238 57.895 0.00 0.00 41.91 1.89
652 808 1.000359 GCAGGGGCTGGGTGTAATT 60.000 57.895 0.00 0.00 36.96 1.40
653 809 1.322538 GCAGGGGCTGGGTGTAATTG 61.323 60.000 0.00 0.00 36.96 2.32
654 810 0.684153 CAGGGGCTGGGTGTAATTGG 60.684 60.000 0.00 0.00 0.00 3.16
655 811 1.146544 AGGGGCTGGGTGTAATTGGT 61.147 55.000 0.00 0.00 0.00 3.67
656 812 0.626916 GGGGCTGGGTGTAATTGGTA 59.373 55.000 0.00 0.00 0.00 3.25
657 813 1.216930 GGGGCTGGGTGTAATTGGTAT 59.783 52.381 0.00 0.00 0.00 2.73
658 814 2.583143 GGGCTGGGTGTAATTGGTATC 58.417 52.381 0.00 0.00 0.00 2.24
659 815 2.174854 GGGCTGGGTGTAATTGGTATCT 59.825 50.000 0.00 0.00 0.00 1.98
660 816 3.372675 GGGCTGGGTGTAATTGGTATCTT 60.373 47.826 0.00 0.00 0.00 2.40
661 817 3.883489 GGCTGGGTGTAATTGGTATCTTC 59.117 47.826 0.00 0.00 0.00 2.87
662 818 3.560068 GCTGGGTGTAATTGGTATCTTCG 59.440 47.826 0.00 0.00 0.00 3.79
663 819 4.766375 CTGGGTGTAATTGGTATCTTCGT 58.234 43.478 0.00 0.00 0.00 3.85
664 820 4.509616 TGGGTGTAATTGGTATCTTCGTG 58.490 43.478 0.00 0.00 0.00 4.35
665 821 4.223255 TGGGTGTAATTGGTATCTTCGTGA 59.777 41.667 0.00 0.00 0.00 4.35
666 822 5.104693 TGGGTGTAATTGGTATCTTCGTGAT 60.105 40.000 0.00 0.21 39.11 3.06
667 823 6.098552 TGGGTGTAATTGGTATCTTCGTGATA 59.901 38.462 0.00 0.00 36.65 2.15
668 824 7.159372 GGGTGTAATTGGTATCTTCGTGATAT 58.841 38.462 4.73 0.00 39.56 1.63
669 825 7.660208 GGGTGTAATTGGTATCTTCGTGATATT 59.340 37.037 4.73 0.00 39.56 1.28
670 826 9.701098 GGTGTAATTGGTATCTTCGTGATATTA 57.299 33.333 4.73 0.00 39.56 0.98
717 873 5.757850 AAGCATCCCAAAATCGAGTTATC 57.242 39.130 0.00 0.00 0.00 1.75
718 874 5.041191 AGCATCCCAAAATCGAGTTATCT 57.959 39.130 0.00 0.00 0.00 1.98
719 875 4.818546 AGCATCCCAAAATCGAGTTATCTG 59.181 41.667 0.00 0.00 0.00 2.90
720 876 4.555511 GCATCCCAAAATCGAGTTATCTGC 60.556 45.833 0.00 1.01 0.00 4.26
721 877 4.214986 TCCCAAAATCGAGTTATCTGCA 57.785 40.909 0.00 0.00 0.00 4.41
765 921 6.090898 CGTGAAGACTTACATTTAAGACCAGG 59.909 42.308 5.64 0.00 37.49 4.45
801 961 9.996554 AAAAATGTATAAAAAGGACAGAAAGGG 57.003 29.630 0.00 0.00 0.00 3.95
873 1034 1.285950 GGTCAGCGTTGAAAAGGGC 59.714 57.895 2.60 0.00 34.49 5.19
945 1112 1.996291 AGGGGAAGGAAGAAAGGGAAG 59.004 52.381 0.00 0.00 0.00 3.46
1339 1542 2.687436 GATTCGCGTTCGACGGTG 59.313 61.111 5.77 0.08 45.43 4.94
1360 1563 2.956987 CTTTGTTGCGCCTGGGAG 59.043 61.111 4.18 0.00 0.00 4.30
1364 1567 4.373116 GTTGCGCCTGGGAGTCGA 62.373 66.667 4.18 0.00 0.00 4.20
1403 1606 1.578926 CGGTTTTCGCAATGCAGGA 59.421 52.632 5.91 0.00 0.00 3.86
1580 1783 1.416772 GGCTCCACTGGTTAGTATCCC 59.583 57.143 0.00 0.00 34.74 3.85
1581 1784 1.416772 GCTCCACTGGTTAGTATCCCC 59.583 57.143 0.00 0.00 34.74 4.81
1582 1785 2.960104 GCTCCACTGGTTAGTATCCCCT 60.960 54.545 0.00 0.00 34.74 4.79
1609 1817 0.179051 CCAGATTCAGAGCAGGCTCC 60.179 60.000 17.16 2.30 43.70 4.70
1660 1868 5.738619 TTTCTGACAGGTCACTAGCAATA 57.261 39.130 1.81 0.00 35.46 1.90
1679 3006 5.268544 CAATATGATGCTGAGGTGTTTTCG 58.731 41.667 0.00 0.00 0.00 3.46
1683 3010 2.842208 TGCTGAGGTGTTTTCGTTTG 57.158 45.000 0.00 0.00 0.00 2.93
1701 3114 4.491676 GTTTGTCGGTGCTGAGAATAGTA 58.508 43.478 0.00 0.00 0.00 1.82
1702 3115 3.777465 TGTCGGTGCTGAGAATAGTAC 57.223 47.619 0.00 0.00 33.23 2.73
1703 3116 3.353557 TGTCGGTGCTGAGAATAGTACT 58.646 45.455 0.00 0.00 34.28 2.73
1704 3117 3.128764 TGTCGGTGCTGAGAATAGTACTG 59.871 47.826 5.39 0.00 39.94 2.74
1705 3118 3.128938 GTCGGTGCTGAGAATAGTACTGT 59.871 47.826 5.39 0.00 39.67 3.55
1706 3119 4.334759 GTCGGTGCTGAGAATAGTACTGTA 59.665 45.833 5.39 0.00 39.67 2.74
1707 3120 4.334759 TCGGTGCTGAGAATAGTACTGTAC 59.665 45.833 9.93 9.93 39.67 2.90
1708 3121 4.599047 GGTGCTGAGAATAGTACTGTACG 58.401 47.826 11.97 0.00 34.28 3.67
1709 3122 4.096081 GGTGCTGAGAATAGTACTGTACGT 59.904 45.833 11.97 0.00 34.28 3.57
1752 3165 5.654209 AGATGGAATTCTTGCTTTAAGGGTC 59.346 40.000 5.23 0.00 37.01 4.46
1755 3168 5.010617 TGGAATTCTTGCTTTAAGGGTCAAC 59.989 40.000 5.23 0.00 37.01 3.18
1768 3181 4.993705 AGGGTCAACTCCTGTCATTTTA 57.006 40.909 0.00 0.00 32.53 1.52
1792 3205 0.376152 GAATGCTGACATGAGTGCCG 59.624 55.000 0.00 0.00 36.36 5.69
1816 3229 6.382608 GCTTGAATCCTTAGAGTTGGTTTTC 58.617 40.000 0.00 0.00 0.00 2.29
1827 3240 6.635030 AGAGTTGGTTTTCATTTCAGTACC 57.365 37.500 0.00 0.00 0.00 3.34
1828 3241 6.126409 AGAGTTGGTTTTCATTTCAGTACCA 58.874 36.000 0.00 0.00 34.08 3.25
1830 3243 6.748132 AGTTGGTTTTCATTTCAGTACCATG 58.252 36.000 0.00 0.00 35.74 3.66
1831 3244 6.323739 AGTTGGTTTTCATTTCAGTACCATGT 59.676 34.615 0.00 0.00 35.74 3.21
1832 3245 7.504238 AGTTGGTTTTCATTTCAGTACCATGTA 59.496 33.333 0.00 0.00 35.74 2.29
1833 3246 7.209471 TGGTTTTCATTTCAGTACCATGTAC 57.791 36.000 0.00 0.00 31.14 2.90
1834 3247 7.001674 TGGTTTTCATTTCAGTACCATGTACT 58.998 34.615 1.14 1.14 31.14 2.73
1835 3248 8.158132 TGGTTTTCATTTCAGTACCATGTACTA 58.842 33.333 6.59 0.00 31.14 1.82
1836 3249 8.665685 GGTTTTCATTTCAGTACCATGTACTAG 58.334 37.037 6.59 0.00 0.00 2.57
1837 3250 9.216117 GTTTTCATTTCAGTACCATGTACTAGT 57.784 33.333 6.59 0.00 0.00 2.57
1840 3253 8.004087 TCATTTCAGTACCATGTACTAGTACC 57.996 38.462 26.41 12.37 37.64 3.34
1843 3256 7.779754 TTCAGTACCATGTACTAGTACCAAA 57.220 36.000 26.41 11.60 37.64 3.28
1844 3257 7.966339 TCAGTACCATGTACTAGTACCAAAT 57.034 36.000 26.41 13.25 37.64 2.32
1879 3295 8.877864 TTTGTCATAGTTTATGAATTGGGAGT 57.122 30.769 0.64 0.00 45.91 3.85
1926 3345 2.167281 TCTTATGAGTCAGGTCTGCAGC 59.833 50.000 9.47 4.04 0.00 5.25
1927 3346 1.857965 TATGAGTCAGGTCTGCAGCT 58.142 50.000 9.47 0.00 0.00 4.24
1928 3347 0.536260 ATGAGTCAGGTCTGCAGCTC 59.464 55.000 9.47 9.28 0.00 4.09
1944 3363 4.895889 TGCAGCTCTTATCTTTAGCTAGGA 59.104 41.667 0.00 0.00 44.58 2.94
1951 3370 8.093927 GCTCTTATCTTTAGCTAGGATTGTGAT 58.906 37.037 13.84 5.85 33.40 3.06
1957 3376 8.250143 TCTTTAGCTAGGATTGTGATATGTGA 57.750 34.615 0.00 0.00 0.00 3.58
1963 3382 6.370994 GCTAGGATTGTGATATGTGAAGGATG 59.629 42.308 0.00 0.00 0.00 3.51
1990 3409 6.349280 GCAAGCACCTTACTTATCATTGAACA 60.349 38.462 0.00 0.00 0.00 3.18
1992 3411 5.351465 AGCACCTTACTTATCATTGAACACG 59.649 40.000 0.00 0.00 0.00 4.49
2025 3445 5.357878 TCAGTTGTTTTGCTGAACTCATCTT 59.642 36.000 0.00 0.00 38.61 2.40
2027 3447 7.066887 TCAGTTGTTTTGCTGAACTCATCTTTA 59.933 33.333 0.00 0.00 38.61 1.85
2028 3448 7.864379 CAGTTGTTTTGCTGAACTCATCTTTAT 59.136 33.333 4.78 0.00 34.87 1.40
2034 3454 9.912634 TTTTGCTGAACTCATCTTTATTTTAGG 57.087 29.630 0.00 0.00 0.00 2.69
2035 3455 7.630242 TGCTGAACTCATCTTTATTTTAGGG 57.370 36.000 0.00 0.00 0.00 3.53
2036 3456 7.402054 TGCTGAACTCATCTTTATTTTAGGGA 58.598 34.615 0.00 0.00 0.00 4.20
2037 3457 8.055181 TGCTGAACTCATCTTTATTTTAGGGAT 58.945 33.333 0.00 0.00 0.00 3.85
2038 3458 8.563732 GCTGAACTCATCTTTATTTTAGGGATC 58.436 37.037 0.00 0.00 0.00 3.36
2039 3459 8.980481 TGAACTCATCTTTATTTTAGGGATCC 57.020 34.615 1.92 1.92 0.00 3.36
2040 3460 7.998964 TGAACTCATCTTTATTTTAGGGATCCC 59.001 37.037 24.59 24.59 0.00 3.85
2053 3473 4.526438 AGGGATCCCTTATTTCAGTTGG 57.474 45.455 28.96 0.00 45.70 3.77
2055 3475 4.294970 AGGGATCCCTTATTTCAGTTGGTT 59.705 41.667 28.96 0.00 45.70 3.67
2056 3476 4.645136 GGGATCCCTTATTTCAGTTGGTTC 59.355 45.833 24.69 0.00 0.00 3.62
2061 3481 4.277423 CCCTTATTTCAGTTGGTTCGTTGT 59.723 41.667 0.00 0.00 0.00 3.32
2069 3489 4.454847 TCAGTTGGTTCGTTGTGTGTTTTA 59.545 37.500 0.00 0.00 0.00 1.52
2070 3490 4.555747 CAGTTGGTTCGTTGTGTGTTTTAC 59.444 41.667 0.00 0.00 0.00 2.01
2074 3494 3.001127 GGTTCGTTGTGTGTTTTACGCTA 59.999 43.478 0.00 0.00 40.47 4.26
2075 3495 4.318974 GGTTCGTTGTGTGTTTTACGCTAT 60.319 41.667 0.00 0.00 40.47 2.97
2081 3502 5.487153 TGTGTGTTTTACGCTATTGTTGT 57.513 34.783 0.00 0.00 40.47 3.32
2083 3504 5.294799 TGTGTGTTTTACGCTATTGTTGTCT 59.705 36.000 0.00 0.00 40.47 3.41
2103 3524 2.892852 CTCATCCCTTGCTCAACCAAAA 59.107 45.455 0.00 0.00 0.00 2.44
2107 3528 3.103742 TCCCTTGCTCAACCAAAAGTTT 58.896 40.909 0.00 0.00 36.18 2.66
2117 3538 6.175712 TCAACCAAAAGTTTTTGCAATGTC 57.824 33.333 0.00 0.00 44.62 3.06
2135 3556 3.620488 TGTCAACTGTTTTTGCTCTCCT 58.380 40.909 0.00 0.00 0.00 3.69
2136 3557 4.016444 TGTCAACTGTTTTTGCTCTCCTT 58.984 39.130 0.00 0.00 0.00 3.36
2168 3589 8.836268 ATTGTGTAAAATTTGAGATGTGCAAT 57.164 26.923 0.00 0.00 0.00 3.56
2170 3591 8.296799 TGTGTAAAATTTGAGATGTGCAATTC 57.703 30.769 0.00 0.00 0.00 2.17
2171 3592 8.143193 TGTGTAAAATTTGAGATGTGCAATTCT 58.857 29.630 0.00 0.00 0.00 2.40
2172 3593 8.642020 GTGTAAAATTTGAGATGTGCAATTCTC 58.358 33.333 16.57 16.57 39.07 2.87
2174 3595 9.415544 GTAAAATTTGAGATGTGCAATTCTCTT 57.584 29.630 21.41 12.87 39.30 2.85
2175 3596 8.897872 AAAATTTGAGATGTGCAATTCTCTTT 57.102 26.923 21.41 13.87 39.30 2.52
2176 3597 9.985730 AAAATTTGAGATGTGCAATTCTCTTTA 57.014 25.926 21.41 11.27 39.30 1.85
2177 3598 9.635520 AAATTTGAGATGTGCAATTCTCTTTAG 57.364 29.630 21.41 0.00 39.30 1.85
2181 3608 9.671279 TTGAGATGTGCAATTCTCTTTAGATTA 57.329 29.630 21.41 3.30 39.30 1.75
2254 3681 4.082026 AGTTTCAGGTTTCCATATGCTTGC 60.082 41.667 0.00 0.00 0.00 4.01
2333 3764 7.801547 ACATACTCAATTCAGCAAAAATTCG 57.198 32.000 0.00 0.00 0.00 3.34
2377 3811 1.134699 TGATCCTCTCGGTTGTCATGC 60.135 52.381 0.00 0.00 0.00 4.06
2451 3886 0.684805 CTGCCTCTTCCCTACTCGGT 60.685 60.000 0.00 0.00 0.00 4.69
2462 3897 2.010582 CTACTCGGTGCTGAGCTCCC 62.011 65.000 18.81 11.28 38.79 4.30
2486 3921 1.002921 ATCATCCCCGTCCCACTGA 59.997 57.895 0.00 0.00 0.00 3.41
2487 3922 0.620410 ATCATCCCCGTCCCACTGAA 60.620 55.000 0.00 0.00 0.00 3.02
2517 3953 4.495844 GCCTACGATTACATTGCAAGGAAC 60.496 45.833 19.41 5.00 0.00 3.62
2733 4182 5.298989 TGGTTAGTTTGACTTAAGCCTGA 57.701 39.130 1.29 0.00 0.00 3.86
2739 4188 6.378710 AGTTTGACTTAAGCCTGAAACTTC 57.621 37.500 1.29 0.00 31.26 3.01
2783 4232 4.790962 AGTGCTGGCTGGGATGCG 62.791 66.667 0.00 0.00 0.00 4.73
2790 4239 1.604593 GGCTGGGATGCGGCATATT 60.605 57.895 16.66 0.00 0.00 1.28
2839 4290 5.701290 ACTTTGCGTGCTAACTTTTAGATCT 59.299 36.000 0.00 0.00 0.00 2.75
2878 4329 2.621668 GGGGAGAGTTTTTGGATCTGGG 60.622 54.545 0.00 0.00 0.00 4.45
2897 4348 3.146066 GGGTTATCTCACAGTGCAACAA 58.854 45.455 0.00 0.00 41.43 2.83
2904 4355 2.090760 TCACAGTGCAACAAGCTTTGA 58.909 42.857 0.00 0.00 45.94 2.69
2937 4388 4.279420 GGGCTTGTCAAGTTTCTCAAGATT 59.721 41.667 14.03 0.00 39.39 2.40
2940 4391 6.460123 GGCTTGTCAAGTTTCTCAAGATTTGA 60.460 38.462 14.03 0.00 39.39 2.69
2942 4393 6.377327 TGTCAAGTTTCTCAAGATTTGACC 57.623 37.500 19.14 9.76 38.29 4.02
2949 4400 4.271696 TCTCAAGATTTGACCGTGACAT 57.728 40.909 0.00 0.00 35.46 3.06
2970 4421 0.463620 TTTGCCTGCAACTTTGGACC 59.536 50.000 3.64 0.00 35.46 4.46
2975 4426 0.535102 CTGCAACTTTGGACCGTCCT 60.535 55.000 18.54 0.00 37.46 3.85
2976 4427 0.106918 TGCAACTTTGGACCGTCCTT 60.107 50.000 18.54 1.60 37.46 3.36
2984 4435 1.890876 TGGACCGTCCTTTGTTGATG 58.109 50.000 18.54 0.00 37.46 3.07
2985 4436 1.165270 GGACCGTCCTTTGTTGATGG 58.835 55.000 10.59 0.00 43.30 3.51
2996 4447 7.413000 CGTCCTTTGTTGATGGTTATTCTGTAG 60.413 40.741 0.00 0.00 0.00 2.74
3019 4470 6.322491 AGTAAATGACTTTAAGGCGCATTTC 58.678 36.000 14.42 4.75 39.22 2.17
3026 4477 6.205853 TGACTTTAAGGCGCATTTCTTTCTTA 59.794 34.615 14.42 3.33 0.00 2.10
3030 4481 9.226345 CTTTAAGGCGCATTTCTTTCTTATTAG 57.774 33.333 14.42 3.84 0.00 1.73
3036 4487 7.255277 GGCGCATTTCTTTCTTATTAGATTCCT 60.255 37.037 10.83 0.00 0.00 3.36
3056 4508 7.880160 TTCCTGAAAACACCATCTTATATGG 57.120 36.000 2.46 2.46 44.54 2.74
3057 4509 6.364701 TCCTGAAAACACCATCTTATATGGG 58.635 40.000 8.78 1.01 43.32 4.00
3062 4514 7.448161 TGAAAACACCATCTTATATGGGCATAG 59.552 37.037 8.78 0.00 43.32 2.23
3063 4515 6.454223 AACACCATCTTATATGGGCATAGT 57.546 37.500 8.78 0.00 43.32 2.12
3064 4516 6.454223 ACACCATCTTATATGGGCATAGTT 57.546 37.500 8.78 0.00 43.32 2.24
3065 4517 6.240894 ACACCATCTTATATGGGCATAGTTG 58.759 40.000 8.78 0.00 43.32 3.16
3076 4528 0.107654 GCATAGTTGCCGAAGACCCT 60.108 55.000 0.00 0.00 43.38 4.34
3077 4529 1.656652 CATAGTTGCCGAAGACCCTG 58.343 55.000 0.00 0.00 0.00 4.45
3080 4532 1.070786 GTTGCCGAAGACCCTGTGA 59.929 57.895 0.00 0.00 0.00 3.58
3081 4533 0.321653 GTTGCCGAAGACCCTGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
3082 4534 0.321564 TTGCCGAAGACCCTGTGATG 60.322 55.000 0.00 0.00 0.00 3.07
3084 4536 0.535335 GCCGAAGACCCTGTGATGTA 59.465 55.000 0.00 0.00 0.00 2.29
3085 4537 1.739371 GCCGAAGACCCTGTGATGTAC 60.739 57.143 0.00 0.00 0.00 2.90
3087 4539 3.021695 CCGAAGACCCTGTGATGTACTA 58.978 50.000 0.00 0.00 0.00 1.82
3089 4541 4.499865 CCGAAGACCCTGTGATGTACTATG 60.500 50.000 0.00 0.00 0.00 2.23
3090 4542 4.338400 CGAAGACCCTGTGATGTACTATGA 59.662 45.833 0.00 0.00 0.00 2.15
3091 4543 5.163550 CGAAGACCCTGTGATGTACTATGAA 60.164 44.000 0.00 0.00 0.00 2.57
3093 4545 6.814954 AGACCCTGTGATGTACTATGAATT 57.185 37.500 0.00 0.00 0.00 2.17
3095 4547 8.497910 AGACCCTGTGATGTACTATGAATTAT 57.502 34.615 0.00 0.00 0.00 1.28
3096 4548 8.370940 AGACCCTGTGATGTACTATGAATTATG 58.629 37.037 0.00 0.00 0.00 1.90
3097 4549 7.453393 ACCCTGTGATGTACTATGAATTATGG 58.547 38.462 0.00 0.00 0.00 2.74
3098 4550 6.372659 CCCTGTGATGTACTATGAATTATGGC 59.627 42.308 0.00 0.00 0.00 4.40
3099 4551 6.936335 CCTGTGATGTACTATGAATTATGGCA 59.064 38.462 0.00 0.00 0.00 4.92
3100 4552 7.095060 CCTGTGATGTACTATGAATTATGGCAC 60.095 40.741 0.00 0.00 0.00 5.01
3101 4553 7.508687 TGTGATGTACTATGAATTATGGCACT 58.491 34.615 0.00 0.00 0.00 4.40
3102 4554 7.657354 TGTGATGTACTATGAATTATGGCACTC 59.343 37.037 0.00 0.00 0.00 3.51
3103 4555 7.657354 GTGATGTACTATGAATTATGGCACTCA 59.343 37.037 0.00 0.00 0.00 3.41
3104 4556 7.657354 TGATGTACTATGAATTATGGCACTCAC 59.343 37.037 0.00 0.00 0.00 3.51
3105 4557 5.983118 TGTACTATGAATTATGGCACTCACG 59.017 40.000 0.00 0.00 0.00 4.35
3106 4558 3.809832 ACTATGAATTATGGCACTCACGC 59.190 43.478 0.00 0.00 0.00 5.34
3107 4559 2.401583 TGAATTATGGCACTCACGCT 57.598 45.000 0.00 0.00 0.00 5.07
3108 4560 3.535280 TGAATTATGGCACTCACGCTA 57.465 42.857 0.00 0.00 0.00 4.26
3109 4561 3.194861 TGAATTATGGCACTCACGCTAC 58.805 45.455 0.00 0.00 0.00 3.58
3110 4562 2.979814 ATTATGGCACTCACGCTACA 57.020 45.000 0.00 0.00 0.00 2.74
3111 4563 2.979814 TTATGGCACTCACGCTACAT 57.020 45.000 0.00 0.00 0.00 2.29
3112 4564 2.979814 TATGGCACTCACGCTACATT 57.020 45.000 0.00 0.00 0.00 2.71
3113 4565 2.979814 ATGGCACTCACGCTACATTA 57.020 45.000 0.00 0.00 0.00 1.90
3114 4566 2.979814 TGGCACTCACGCTACATTAT 57.020 45.000 0.00 0.00 0.00 1.28
3115 4567 2.821546 TGGCACTCACGCTACATTATC 58.178 47.619 0.00 0.00 0.00 1.75
3116 4568 2.430694 TGGCACTCACGCTACATTATCT 59.569 45.455 0.00 0.00 0.00 1.98
3117 4569 2.797156 GGCACTCACGCTACATTATCTG 59.203 50.000 0.00 0.00 0.00 2.90
3118 4570 3.490933 GGCACTCACGCTACATTATCTGA 60.491 47.826 0.00 0.00 0.00 3.27
3119 4571 4.112634 GCACTCACGCTACATTATCTGAA 58.887 43.478 0.00 0.00 0.00 3.02
3120 4572 4.208047 GCACTCACGCTACATTATCTGAAG 59.792 45.833 0.00 0.00 0.00 3.02
3121 4573 4.208047 CACTCACGCTACATTATCTGAAGC 59.792 45.833 0.00 0.00 0.00 3.86
3122 4574 4.142160 ACTCACGCTACATTATCTGAAGCA 60.142 41.667 0.00 0.00 32.69 3.91
3123 4575 4.363138 TCACGCTACATTATCTGAAGCAG 58.637 43.478 0.00 0.00 32.69 4.24
3124 4576 3.060003 CACGCTACATTATCTGAAGCAGC 60.060 47.826 0.00 0.00 32.69 5.25
3125 4577 3.126073 CGCTACATTATCTGAAGCAGCA 58.874 45.455 0.00 0.00 32.69 4.41
3126 4578 3.744942 CGCTACATTATCTGAAGCAGCAT 59.255 43.478 0.00 0.00 32.69 3.79
3127 4579 4.377124 CGCTACATTATCTGAAGCAGCATG 60.377 45.833 0.00 0.00 40.87 4.06
3128 4580 4.514441 GCTACATTATCTGAAGCAGCATGT 59.486 41.667 0.00 0.00 39.31 3.21
3129 4581 5.008415 GCTACATTATCTGAAGCAGCATGTT 59.992 40.000 0.00 0.00 39.31 2.71
3130 4582 5.909621 ACATTATCTGAAGCAGCATGTTT 57.090 34.783 0.00 0.00 44.25 2.83
3131 4583 6.276832 ACATTATCTGAAGCAGCATGTTTT 57.723 33.333 0.00 0.00 40.56 2.43
3132 4584 6.327934 ACATTATCTGAAGCAGCATGTTTTC 58.672 36.000 0.00 0.00 40.56 2.29
3133 4585 6.152323 ACATTATCTGAAGCAGCATGTTTTCT 59.848 34.615 0.00 0.00 40.56 2.52
3134 4586 3.909776 TCTGAAGCAGCATGTTTTCTG 57.090 42.857 0.00 0.00 40.56 3.02
3135 4587 3.479489 TCTGAAGCAGCATGTTTTCTGA 58.521 40.909 0.00 1.86 40.56 3.27
3136 4588 3.884693 TCTGAAGCAGCATGTTTTCTGAA 59.115 39.130 0.00 0.00 40.56 3.02
3137 4589 4.338964 TCTGAAGCAGCATGTTTTCTGAAA 59.661 37.500 0.00 0.00 40.56 2.69
3138 4590 5.010314 TCTGAAGCAGCATGTTTTCTGAAAT 59.990 36.000 3.31 0.00 40.56 2.17
3139 4591 5.603596 TGAAGCAGCATGTTTTCTGAAATT 58.396 33.333 3.31 0.00 40.56 1.82
3140 4592 6.050432 TGAAGCAGCATGTTTTCTGAAATTT 58.950 32.000 3.31 0.00 40.56 1.82
3141 4593 7.208777 TGAAGCAGCATGTTTTCTGAAATTTA 58.791 30.769 3.31 0.00 40.56 1.40
3142 4594 7.169645 TGAAGCAGCATGTTTTCTGAAATTTAC 59.830 33.333 3.31 0.31 40.56 2.01
3143 4595 6.752168 AGCAGCATGTTTTCTGAAATTTACT 58.248 32.000 3.31 0.00 39.31 2.24
3144 4596 7.885297 AGCAGCATGTTTTCTGAAATTTACTA 58.115 30.769 3.31 0.00 39.31 1.82
3145 4597 7.809806 AGCAGCATGTTTTCTGAAATTTACTAC 59.190 33.333 3.31 0.00 39.31 2.73
3146 4598 7.809806 GCAGCATGTTTTCTGAAATTTACTACT 59.190 33.333 3.31 0.00 39.31 2.57
3147 4599 9.334693 CAGCATGTTTTCTGAAATTTACTACTC 57.665 33.333 3.31 0.00 32.26 2.59
3148 4600 8.515414 AGCATGTTTTCTGAAATTTACTACTCC 58.485 33.333 3.31 0.00 0.00 3.85
3149 4601 7.755373 GCATGTTTTCTGAAATTTACTACTCCC 59.245 37.037 3.31 0.00 0.00 4.30
3150 4602 9.014297 CATGTTTTCTGAAATTTACTACTCCCT 57.986 33.333 3.31 0.00 0.00 4.20
3151 4603 8.990163 TGTTTTCTGAAATTTACTACTCCCTT 57.010 30.769 3.31 0.00 0.00 3.95
3152 4604 9.063615 TGTTTTCTGAAATTTACTACTCCCTTC 57.936 33.333 3.31 0.00 0.00 3.46
3153 4605 7.900782 TTTCTGAAATTTACTACTCCCTTCG 57.099 36.000 0.00 0.00 0.00 3.79
3154 4606 6.845758 TCTGAAATTTACTACTCCCTTCGA 57.154 37.500 0.00 0.00 0.00 3.71
3155 4607 7.419711 TCTGAAATTTACTACTCCCTTCGAT 57.580 36.000 0.00 0.00 0.00 3.59
3156 4608 7.490000 TCTGAAATTTACTACTCCCTTCGATC 58.510 38.462 0.00 0.00 0.00 3.69
3157 4609 7.342284 TCTGAAATTTACTACTCCCTTCGATCT 59.658 37.037 0.00 0.00 0.00 2.75
3158 4610 8.529424 TGAAATTTACTACTCCCTTCGATCTA 57.471 34.615 0.00 0.00 0.00 1.98
3159 4611 9.144298 TGAAATTTACTACTCCCTTCGATCTAT 57.856 33.333 0.00 0.00 0.00 1.98
3167 4619 9.233649 ACTACTCCCTTCGATCTATATTACTTG 57.766 37.037 0.00 0.00 0.00 3.16
3168 4620 6.926313 ACTCCCTTCGATCTATATTACTTGC 58.074 40.000 0.00 0.00 0.00 4.01
3169 4621 6.071278 ACTCCCTTCGATCTATATTACTTGCC 60.071 42.308 0.00 0.00 0.00 4.52
3170 4622 6.017192 TCCCTTCGATCTATATTACTTGCCT 58.983 40.000 0.00 0.00 0.00 4.75
3171 4623 6.153000 TCCCTTCGATCTATATTACTTGCCTC 59.847 42.308 0.00 0.00 0.00 4.70
3172 4624 6.153680 CCCTTCGATCTATATTACTTGCCTCT 59.846 42.308 0.00 0.00 0.00 3.69
3173 4625 7.254852 CCTTCGATCTATATTACTTGCCTCTC 58.745 42.308 0.00 0.00 0.00 3.20
3174 4626 7.094162 CCTTCGATCTATATTACTTGCCTCTCA 60.094 40.741 0.00 0.00 0.00 3.27
3175 4627 7.946381 TCGATCTATATTACTTGCCTCTCAT 57.054 36.000 0.00 0.00 0.00 2.90
3176 4628 8.354711 TCGATCTATATTACTTGCCTCTCATT 57.645 34.615 0.00 0.00 0.00 2.57
3177 4629 8.462811 TCGATCTATATTACTTGCCTCTCATTC 58.537 37.037 0.00 0.00 0.00 2.67
3178 4630 8.246871 CGATCTATATTACTTGCCTCTCATTCA 58.753 37.037 0.00 0.00 0.00 2.57
3179 4631 9.585099 GATCTATATTACTTGCCTCTCATTCAG 57.415 37.037 0.00 0.00 0.00 3.02
3180 4632 8.712228 TCTATATTACTTGCCTCTCATTCAGA 57.288 34.615 0.00 0.00 0.00 3.27
3189 4641 2.244486 TCTCATTCAGAGGGAGTGCT 57.756 50.000 0.00 0.00 44.81 4.40
3190 4642 1.829849 TCTCATTCAGAGGGAGTGCTG 59.170 52.381 0.00 0.00 44.81 4.41
3191 4643 1.554160 CTCATTCAGAGGGAGTGCTGT 59.446 52.381 0.00 0.00 40.84 4.40
3192 4644 2.762887 CTCATTCAGAGGGAGTGCTGTA 59.237 50.000 0.00 0.00 40.84 2.74
3193 4645 3.378512 TCATTCAGAGGGAGTGCTGTAT 58.621 45.455 0.00 0.00 33.54 2.29
3194 4646 3.776969 TCATTCAGAGGGAGTGCTGTATT 59.223 43.478 0.00 0.00 33.54 1.89
3195 4647 4.225942 TCATTCAGAGGGAGTGCTGTATTT 59.774 41.667 0.00 0.00 33.54 1.40
3196 4648 4.640771 TTCAGAGGGAGTGCTGTATTTT 57.359 40.909 0.00 0.00 33.90 1.82
3197 4649 4.640771 TCAGAGGGAGTGCTGTATTTTT 57.359 40.909 0.00 0.00 33.90 1.94
3198 4650 5.755409 TCAGAGGGAGTGCTGTATTTTTA 57.245 39.130 0.00 0.00 33.90 1.52
3199 4651 6.313519 TCAGAGGGAGTGCTGTATTTTTAT 57.686 37.500 0.00 0.00 33.90 1.40
3200 4652 6.721318 TCAGAGGGAGTGCTGTATTTTTATT 58.279 36.000 0.00 0.00 33.90 1.40
3201 4653 7.857456 TCAGAGGGAGTGCTGTATTTTTATTA 58.143 34.615 0.00 0.00 33.90 0.98
3202 4654 8.494433 TCAGAGGGAGTGCTGTATTTTTATTAT 58.506 33.333 0.00 0.00 33.90 1.28
3203 4655 9.778741 CAGAGGGAGTGCTGTATTTTTATTATA 57.221 33.333 0.00 0.00 0.00 0.98
3204 4656 9.780186 AGAGGGAGTGCTGTATTTTTATTATAC 57.220 33.333 0.00 0.00 0.00 1.47
3205 4657 9.780186 GAGGGAGTGCTGTATTTTTATTATACT 57.220 33.333 0.00 0.00 31.30 2.12
3206 4658 9.780186 AGGGAGTGCTGTATTTTTATTATACTC 57.220 33.333 0.00 0.00 31.30 2.59
3207 4659 9.000486 GGGAGTGCTGTATTTTTATTATACTCC 58.000 37.037 0.00 0.00 45.96 3.85
3208 4660 9.780186 GGAGTGCTGTATTTTTATTATACTCCT 57.220 33.333 0.00 0.00 44.27 3.69
3210 4662 9.057089 AGTGCTGTATTTTTATTATACTCCTGC 57.943 33.333 0.00 0.00 31.30 4.85
3211 4663 9.057089 GTGCTGTATTTTTATTATACTCCTGCT 57.943 33.333 0.00 0.00 31.30 4.24
3212 4664 9.627123 TGCTGTATTTTTATTATACTCCTGCTT 57.373 29.630 0.00 0.00 31.30 3.91
3216 4668 9.595357 GTATTTTTATTATACTCCTGCTTTCGC 57.405 33.333 0.00 0.00 0.00 4.70
3217 4669 6.613755 TTTTATTATACTCCTGCTTTCGCC 57.386 37.500 0.00 0.00 34.43 5.54
3218 4670 5.546621 TTATTATACTCCTGCTTTCGCCT 57.453 39.130 0.00 0.00 34.43 5.52
3219 4671 2.890808 TATACTCCTGCTTTCGCCTG 57.109 50.000 0.00 0.00 34.43 4.85
3220 4672 0.462759 ATACTCCTGCTTTCGCCTGC 60.463 55.000 0.00 0.00 34.43 4.85
3221 4673 1.826340 TACTCCTGCTTTCGCCTGCA 61.826 55.000 0.00 0.00 37.63 4.41
3250 4702 5.328886 GCAGTTGCAAAGTAAAAACCATC 57.671 39.130 0.00 0.00 41.59 3.51
3254 4706 3.971150 TGCAAAGTAAAAACCATCGTGG 58.029 40.909 2.92 2.92 45.02 4.94
3261 4713 1.626686 AAAACCATCGTGGCCATTGA 58.373 45.000 9.72 11.42 42.67 2.57
3280 4732 2.616842 TGAGAAGGCAAAGAAAACGGTC 59.383 45.455 0.00 0.00 0.00 4.79
3285 4737 1.397567 GGCAAAGAAAACGGTCGTACG 60.398 52.381 9.53 9.53 40.31 3.67
3295 4747 2.253603 ACGGTCGTACGACAAAATAGC 58.746 47.619 39.96 24.16 46.20 2.97
3298 4750 3.722780 CGGTCGTACGACAAAATAGCTAG 59.277 47.826 39.96 18.49 46.20 3.42
3300 4752 5.335127 GGTCGTACGACAAAATAGCTAGAA 58.665 41.667 39.96 4.45 46.20 2.10
3302 4754 6.237411 GGTCGTACGACAAAATAGCTAGAAAC 60.237 42.308 39.96 19.12 46.20 2.78
3303 4755 6.525976 GTCGTACGACAAAATAGCTAGAAACT 59.474 38.462 36.60 0.00 44.02 2.66
3304 4756 7.061557 GTCGTACGACAAAATAGCTAGAAACTT 59.938 37.037 36.60 0.00 44.02 2.66
3305 4757 7.061441 TCGTACGACAAAATAGCTAGAAACTTG 59.939 37.037 15.28 1.10 0.00 3.16
3309 4761 6.147164 CGACAAAATAGCTAGAAACTTGTCCA 59.853 38.462 19.67 0.00 38.49 4.02
3322 4774 3.470709 ACTTGTCCATAGATTCATGCGG 58.529 45.455 0.00 0.00 0.00 5.69
3325 4777 2.224597 TGTCCATAGATTCATGCGGCAT 60.225 45.455 10.23 10.23 0.00 4.40
3326 4778 2.161012 GTCCATAGATTCATGCGGCATG 59.839 50.000 31.85 31.85 42.60 4.06
3340 4793 1.760192 GGCATGAGCAACATTCTCCT 58.240 50.000 0.00 0.00 44.61 3.69
3341 4794 2.097825 GGCATGAGCAACATTCTCCTT 58.902 47.619 0.00 0.00 44.61 3.36
3346 4841 3.338249 TGAGCAACATTCTCCTTACTGC 58.662 45.455 0.00 0.00 0.00 4.40
3347 4842 2.680339 GAGCAACATTCTCCTTACTGCC 59.320 50.000 0.00 0.00 0.00 4.85
3372 4867 5.796350 ACAGTACAACAGAGAACAACAAC 57.204 39.130 0.00 0.00 0.00 3.32
3376 4871 7.224753 ACAGTACAACAGAGAACAACAACTATG 59.775 37.037 0.00 0.00 0.00 2.23
3382 4877 6.150318 ACAGAGAACAACAACTATGTACGAG 58.850 40.000 0.00 0.00 39.40 4.18
3385 4880 3.955650 ACAACAACTATGTACGAGCCT 57.044 42.857 0.00 0.00 39.40 4.58
3390 4885 0.747255 ACTATGTACGAGCCTGCCAG 59.253 55.000 0.00 0.00 0.00 4.85
3396 4891 1.035932 TACGAGCCTGCCAGACTACC 61.036 60.000 0.00 0.00 0.00 3.18
3397 4892 2.496817 GAGCCTGCCAGACTACCG 59.503 66.667 0.00 0.00 0.00 4.02
3399 4894 2.184579 GCCTGCCAGACTACCGTC 59.815 66.667 0.00 0.00 40.54 4.79
3410 4905 2.685100 GACTACCGTCTCCAACAAAGG 58.315 52.381 0.00 0.00 37.19 3.11
3411 4906 2.036862 GACTACCGTCTCCAACAAAGGT 59.963 50.000 0.00 0.00 37.19 3.50
3412 4907 2.436911 ACTACCGTCTCCAACAAAGGTT 59.563 45.455 0.00 0.00 37.87 3.50
3413 4908 2.430248 ACCGTCTCCAACAAAGGTTT 57.570 45.000 0.00 0.00 34.21 3.27
3414 4909 2.021457 ACCGTCTCCAACAAAGGTTTG 58.979 47.619 0.77 0.77 43.62 2.93
3415 4910 1.269051 CCGTCTCCAACAAAGGTTTGC 60.269 52.381 2.27 0.00 41.79 3.68
3416 4911 1.676006 CGTCTCCAACAAAGGTTTGCT 59.324 47.619 2.27 0.00 41.79 3.91
3417 4912 2.541588 CGTCTCCAACAAAGGTTTGCTG 60.542 50.000 2.27 0.94 41.79 4.41
3423 4918 3.869948 CAACAAAGGTTTGCTGCACAGC 61.870 50.000 15.68 15.68 44.45 4.40
3435 4930 1.006922 GCACAGCCTTGGAAACAGC 60.007 57.895 0.00 0.00 44.54 4.40
3443 4938 1.168714 CTTGGAAACAGCTACCAGCC 58.831 55.000 0.00 0.00 43.77 4.85
3460 4955 4.077184 CGGCCTGCGGTACAAGGA 62.077 66.667 11.56 0.00 0.00 3.36
3461 4956 2.125106 GGCCTGCGGTACAAGGAG 60.125 66.667 11.56 7.27 0.00 3.69
3462 4957 2.656069 GGCCTGCGGTACAAGGAGA 61.656 63.158 11.56 0.00 0.00 3.71
3464 4959 0.741221 GCCTGCGGTACAAGGAGAAG 60.741 60.000 11.56 0.00 0.00 2.85
3471 4966 3.139077 CGGTACAAGGAGAAGCAAAACT 58.861 45.455 0.00 0.00 0.00 2.66
3477 4972 5.133221 ACAAGGAGAAGCAAAACTACACAT 58.867 37.500 0.00 0.00 0.00 3.21
3479 4974 3.503748 AGGAGAAGCAAAACTACACATGC 59.496 43.478 0.00 0.00 39.06 4.06
3506 5001 5.278957 GGCAAAGCTACATTTTCCTTCAGAA 60.279 40.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.446907 AGCAGATCAAAGACTTGGCG 58.553 50.000 0.00 0.00 33.01 5.69
16 17 2.751259 GAGGCAAACATGAAGCAGATCA 59.249 45.455 0.00 0.00 0.00 2.92
25 26 1.833630 AGATCGAGGAGGCAAACATGA 59.166 47.619 0.00 0.00 0.00 3.07
30 31 1.134367 CGTACAGATCGAGGAGGCAAA 59.866 52.381 0.00 0.00 0.00 3.68
32 33 1.725557 GCGTACAGATCGAGGAGGCA 61.726 60.000 11.61 0.00 0.00 4.75
35 36 0.738975 TTGGCGTACAGATCGAGGAG 59.261 55.000 0.00 0.00 0.00 3.69
37 38 0.866061 CGTTGGCGTACAGATCGAGG 60.866 60.000 0.00 0.00 0.00 4.63
53 54 0.033090 GAGGAACACCGGAACTCGTT 59.967 55.000 9.46 2.80 37.11 3.85
66 67 9.617975 CAAACATCAGAAATCTTTAAGAGGAAC 57.382 33.333 0.03 0.00 0.00 3.62
69 70 7.959651 CGTCAAACATCAGAAATCTTTAAGAGG 59.040 37.037 0.03 0.00 0.00 3.69
74 75 6.552859 TGCGTCAAACATCAGAAATCTTTA 57.447 33.333 0.00 0.00 0.00 1.85
75 76 5.437289 TGCGTCAAACATCAGAAATCTTT 57.563 34.783 0.00 0.00 0.00 2.52
76 77 5.048504 ACATGCGTCAAACATCAGAAATCTT 60.049 36.000 0.00 0.00 0.00 2.40
81 82 2.157474 CGACATGCGTCAAACATCAGAA 59.843 45.455 0.00 0.00 42.74 3.02
100 101 7.582667 TTTTGATCTAGATATCCAGTGACGA 57.417 36.000 4.89 0.00 0.00 4.20
103 104 8.409358 TCGATTTTGATCTAGATATCCAGTGA 57.591 34.615 4.89 0.00 0.00 3.41
130 131 1.255667 ATAAGGGAGCACACGACCGT 61.256 55.000 0.00 0.00 0.00 4.83
137 138 0.178068 GCCGAAGATAAGGGAGCACA 59.822 55.000 0.00 0.00 0.00 4.57
156 157 1.684248 CCCCTCATGAAGCCTCTTTGG 60.684 57.143 0.00 0.00 39.35 3.28
161 162 1.225704 CACCCCCTCATGAAGCCTC 59.774 63.158 0.00 0.00 0.00 4.70
166 167 2.668632 GCGTCACCCCCTCATGAA 59.331 61.111 0.00 0.00 0.00 2.57
176 177 1.289109 TAGCAAAGCTTCGCGTCACC 61.289 55.000 5.77 0.00 40.44 4.02
180 181 1.394917 CAAGATAGCAAAGCTTCGCGT 59.605 47.619 5.77 0.00 40.44 6.01
189 190 1.312371 GGCACCGGCAAGATAGCAAA 61.312 55.000 0.00 0.00 43.71 3.68
225 226 7.090808 CCATTCTCAATGCATGGAAATCTATG 58.909 38.462 5.04 4.80 40.10 2.23
226 227 6.781014 ACCATTCTCAATGCATGGAAATCTAT 59.219 34.615 5.04 0.00 40.10 1.98
237 238 4.768448 ACTTTCATCACCATTCTCAATGCA 59.232 37.500 0.00 0.00 37.57 3.96
245 246 5.581126 TGCCATAACTTTCATCACCATTC 57.419 39.130 0.00 0.00 0.00 2.67
246 247 4.142093 GCTGCCATAACTTTCATCACCATT 60.142 41.667 0.00 0.00 0.00 3.16
247 248 3.382546 GCTGCCATAACTTTCATCACCAT 59.617 43.478 0.00 0.00 0.00 3.55
252 253 2.540361 CGCAGCTGCCATAACTTTCATC 60.540 50.000 32.07 0.44 37.91 2.92
254 255 0.804364 CGCAGCTGCCATAACTTTCA 59.196 50.000 32.07 0.00 37.91 2.69
269 270 0.179111 TTACAAGCCTCCGATCGCAG 60.179 55.000 10.32 3.73 0.00 5.18
272 273 1.502231 CCATTACAAGCCTCCGATCG 58.498 55.000 8.51 8.51 0.00 3.69
277 278 0.815615 CTCCGCCATTACAAGCCTCC 60.816 60.000 0.00 0.00 0.00 4.30
291 292 0.889186 TGCCAAAAACTCCTCTCCGC 60.889 55.000 0.00 0.00 0.00 5.54
294 295 2.353109 GCCATTGCCAAAAACTCCTCTC 60.353 50.000 0.00 0.00 0.00 3.20
295 296 1.620323 GCCATTGCCAAAAACTCCTCT 59.380 47.619 0.00 0.00 0.00 3.69
308 309 1.072173 AGGGTTCAAAAAGGCCATTGC 59.928 47.619 5.01 0.00 0.00 3.56
309 310 3.490439 AAGGGTTCAAAAAGGCCATTG 57.510 42.857 5.01 7.61 0.00 2.82
311 312 2.106338 CCAAAGGGTTCAAAAAGGCCAT 59.894 45.455 5.01 0.00 0.00 4.40
312 313 1.488393 CCAAAGGGTTCAAAAAGGCCA 59.512 47.619 5.01 0.00 0.00 5.36
313 314 1.813862 GCCAAAGGGTTCAAAAAGGCC 60.814 52.381 0.00 0.00 34.94 5.19
314 315 1.134250 TGCCAAAGGGTTCAAAAAGGC 60.134 47.619 0.00 0.00 41.15 4.35
315 316 2.998316 TGCCAAAGGGTTCAAAAAGG 57.002 45.000 0.00 0.00 36.17 3.11
316 317 3.565063 CCATTGCCAAAGGGTTCAAAAAG 59.435 43.478 0.00 0.00 32.39 2.27
317 318 3.549794 CCATTGCCAAAGGGTTCAAAAA 58.450 40.909 0.00 0.00 32.39 1.94
318 319 2.747799 GCCATTGCCAAAGGGTTCAAAA 60.748 45.455 0.27 0.00 39.51 2.44
319 320 1.202746 GCCATTGCCAAAGGGTTCAAA 60.203 47.619 0.27 0.00 39.51 2.69
320 321 0.396060 GCCATTGCCAAAGGGTTCAA 59.604 50.000 0.27 0.00 39.51 2.69
344 489 3.749665 TCCCAAAAACAATGCCTTCAG 57.250 42.857 0.00 0.00 0.00 3.02
356 501 4.367039 AGAAAGACCGAGATCCCAAAAA 57.633 40.909 0.00 0.00 0.00 1.94
392 537 1.528586 GTCGCCCGATCAATGATCTTG 59.471 52.381 19.62 11.86 36.96 3.02
399 544 0.802494 GTTGTTGTCGCCCGATCAAT 59.198 50.000 0.00 0.00 0.00 2.57
438 583 0.816018 TTCAAAGCGACGCCTCCAAA 60.816 50.000 17.79 2.11 0.00 3.28
463 609 4.141251 AGACAACACTCATACCCCAAAAGT 60.141 41.667 0.00 0.00 0.00 2.66
470 616 3.502211 CACCAAAGACAACACTCATACCC 59.498 47.826 0.00 0.00 0.00 3.69
474 620 3.381272 CCAACACCAAAGACAACACTCAT 59.619 43.478 0.00 0.00 0.00 2.90
493 639 6.824196 TGATGAAACACTAACACTGTAACCAA 59.176 34.615 0.00 0.00 0.00 3.67
510 665 3.371898 TGATCATGTCGCAGTGATGAAAC 59.628 43.478 0.00 0.00 35.33 2.78
566 722 4.141981 ACATTCAGAATGCACACAACCAAA 60.142 37.500 21.22 0.00 42.69 3.28
571 727 5.518848 AAAGACATTCAGAATGCACACAA 57.481 34.783 21.22 0.00 42.69 3.33
581 737 9.698309 GGATATATTCGAGAAAAGACATTCAGA 57.302 33.333 0.00 0.00 0.00 3.27
593 749 9.698309 GAAAGACATTCAGGATATATTCGAGAA 57.302 33.333 4.92 4.92 37.99 2.87
594 750 8.023706 CGAAAGACATTCAGGATATATTCGAGA 58.976 37.037 0.00 0.00 38.44 4.04
595 751 8.023706 TCGAAAGACATTCAGGATATATTCGAG 58.976 37.037 0.00 0.00 39.67 4.04
596 752 7.882179 TCGAAAGACATTCAGGATATATTCGA 58.118 34.615 0.00 0.00 41.50 3.71
614 770 5.122239 CCTGCACAAATAAGATGTCGAAAGA 59.878 40.000 0.00 0.00 38.16 2.52
615 771 5.327091 CCTGCACAAATAAGATGTCGAAAG 58.673 41.667 0.00 0.00 0.00 2.62
616 772 4.155826 CCCTGCACAAATAAGATGTCGAAA 59.844 41.667 0.00 0.00 0.00 3.46
617 773 3.689161 CCCTGCACAAATAAGATGTCGAA 59.311 43.478 0.00 0.00 0.00 3.71
618 774 3.270027 CCCTGCACAAATAAGATGTCGA 58.730 45.455 0.00 0.00 0.00 4.20
619 775 2.355756 CCCCTGCACAAATAAGATGTCG 59.644 50.000 0.00 0.00 0.00 4.35
620 776 2.099756 GCCCCTGCACAAATAAGATGTC 59.900 50.000 0.00 0.00 37.47 3.06
621 777 2.102578 GCCCCTGCACAAATAAGATGT 58.897 47.619 0.00 0.00 37.47 3.06
622 778 2.100252 CAGCCCCTGCACAAATAAGATG 59.900 50.000 0.00 0.00 41.13 2.90
623 779 2.381911 CAGCCCCTGCACAAATAAGAT 58.618 47.619 0.00 0.00 41.13 2.40
624 780 1.616725 CCAGCCCCTGCACAAATAAGA 60.617 52.381 0.00 0.00 41.13 2.10
625 781 0.819582 CCAGCCCCTGCACAAATAAG 59.180 55.000 0.00 0.00 41.13 1.73
626 782 0.614415 CCCAGCCCCTGCACAAATAA 60.614 55.000 0.00 0.00 41.13 1.40
627 783 1.000233 CCCAGCCCCTGCACAAATA 60.000 57.895 0.00 0.00 41.13 1.40
628 784 2.284112 CCCAGCCCCTGCACAAAT 60.284 61.111 0.00 0.00 41.13 2.32
629 785 3.831637 ACCCAGCCCCTGCACAAA 61.832 61.111 0.00 0.00 41.13 2.83
630 786 4.601794 CACCCAGCCCCTGCACAA 62.602 66.667 0.00 0.00 41.13 3.33
632 788 2.499303 ATTACACCCAGCCCCTGCAC 62.499 60.000 0.00 0.00 41.13 4.57
633 789 1.799157 AATTACACCCAGCCCCTGCA 61.799 55.000 0.00 0.00 41.13 4.41
634 790 1.000359 AATTACACCCAGCCCCTGC 60.000 57.895 0.00 0.00 37.95 4.85
635 791 0.684153 CCAATTACACCCAGCCCCTG 60.684 60.000 0.00 0.00 0.00 4.45
636 792 1.146544 ACCAATTACACCCAGCCCCT 61.147 55.000 0.00 0.00 0.00 4.79
637 793 0.626916 TACCAATTACACCCAGCCCC 59.373 55.000 0.00 0.00 0.00 5.80
638 794 2.174854 AGATACCAATTACACCCAGCCC 59.825 50.000 0.00 0.00 0.00 5.19
639 795 3.577805 AGATACCAATTACACCCAGCC 57.422 47.619 0.00 0.00 0.00 4.85
640 796 3.560068 CGAAGATACCAATTACACCCAGC 59.440 47.826 0.00 0.00 0.00 4.85
641 797 4.570772 CACGAAGATACCAATTACACCCAG 59.429 45.833 0.00 0.00 0.00 4.45
642 798 4.223255 TCACGAAGATACCAATTACACCCA 59.777 41.667 0.00 0.00 0.00 4.51
643 799 4.761975 TCACGAAGATACCAATTACACCC 58.238 43.478 0.00 0.00 0.00 4.61
644 800 8.603242 AATATCACGAAGATACCAATTACACC 57.397 34.615 0.00 0.00 41.81 4.16
692 848 4.871933 ACTCGATTTTGGGATGCTTTTT 57.128 36.364 0.00 0.00 0.00 1.94
693 849 4.871933 AACTCGATTTTGGGATGCTTTT 57.128 36.364 0.00 0.00 0.00 2.27
694 850 5.888161 AGATAACTCGATTTTGGGATGCTTT 59.112 36.000 0.00 0.00 0.00 3.51
695 851 5.297776 CAGATAACTCGATTTTGGGATGCTT 59.702 40.000 0.00 0.00 0.00 3.91
696 852 4.818546 CAGATAACTCGATTTTGGGATGCT 59.181 41.667 0.00 0.00 0.00 3.79
697 853 4.555511 GCAGATAACTCGATTTTGGGATGC 60.556 45.833 0.00 0.00 0.00 3.91
698 854 4.576053 TGCAGATAACTCGATTTTGGGATG 59.424 41.667 0.00 0.00 0.00 3.51
700 856 4.214986 TGCAGATAACTCGATTTTGGGA 57.785 40.909 0.00 0.00 0.00 4.37
801 961 0.608035 TCGAATGTGGTGGGCCTTTC 60.608 55.000 4.53 0.00 35.27 2.62
905 1069 0.522180 CTGCTTCAGGCTGCTGAAAG 59.478 55.000 10.34 9.42 42.02 2.62
906 1070 0.109153 TCTGCTTCAGGCTGCTGAAA 59.891 50.000 10.34 0.00 42.02 2.69
945 1112 0.036294 GGTTCTACACAGGTCTGGGC 60.036 60.000 0.00 0.00 37.55 5.36
1297 1500 1.944234 GCCCAAATTAGGCCACGGTG 61.944 60.000 5.01 0.00 45.16 4.94
1339 1542 2.732094 CAGGCGCAACAAAGCAGC 60.732 61.111 10.83 0.00 34.76 5.25
1360 1563 2.095853 ACAATTCGCCATCACAATCGAC 59.904 45.455 0.00 0.00 0.00 4.20
1364 1567 3.135414 CGAACAATTCGCCATCACAAT 57.865 42.857 0.00 0.00 46.97 2.71
1392 1595 0.167470 CACTTCACTCCTGCATTGCG 59.833 55.000 3.84 0.00 0.00 4.85
1403 1606 1.141053 GTCCTGAACACCCACTTCACT 59.859 52.381 0.00 0.00 0.00 3.41
1517 1720 3.144120 GATGAAGAGAACGCGGCGC 62.144 63.158 24.21 24.21 0.00 6.53
1580 1783 2.699846 CTCTGAATCTGGAGGAGGAAGG 59.300 54.545 0.00 0.00 0.00 3.46
1581 1784 2.102925 GCTCTGAATCTGGAGGAGGAAG 59.897 54.545 6.12 0.00 0.00 3.46
1582 1785 2.114616 GCTCTGAATCTGGAGGAGGAA 58.885 52.381 6.12 0.00 0.00 3.36
1609 1817 4.058817 GACAGGACACACTTAACCAAGAG 58.941 47.826 0.00 0.00 35.60 2.85
1660 1868 2.783135 ACGAAAACACCTCAGCATCAT 58.217 42.857 0.00 0.00 0.00 2.45
1679 3006 3.326747 ACTATTCTCAGCACCGACAAAC 58.673 45.455 0.00 0.00 0.00 2.93
1683 3010 3.128938 ACAGTACTATTCTCAGCACCGAC 59.871 47.826 0.00 0.00 0.00 4.79
1701 3114 3.442625 TGATGCTACTTGCTACGTACAGT 59.557 43.478 0.00 0.00 43.37 3.55
1702 3115 3.791887 GTGATGCTACTTGCTACGTACAG 59.208 47.826 0.00 0.00 43.37 2.74
1703 3116 3.428452 GGTGATGCTACTTGCTACGTACA 60.428 47.826 0.00 0.00 43.37 2.90
1704 3117 3.114065 GGTGATGCTACTTGCTACGTAC 58.886 50.000 0.00 0.00 43.37 3.67
1705 3118 3.021695 AGGTGATGCTACTTGCTACGTA 58.978 45.455 0.00 0.00 43.37 3.57
1706 3119 1.825474 AGGTGATGCTACTTGCTACGT 59.175 47.619 0.00 0.00 43.37 3.57
1707 3120 2.159240 TCAGGTGATGCTACTTGCTACG 60.159 50.000 0.00 0.00 43.37 3.51
1708 3121 3.131223 TCTCAGGTGATGCTACTTGCTAC 59.869 47.826 0.00 0.00 43.37 3.58
1709 3122 3.365472 TCTCAGGTGATGCTACTTGCTA 58.635 45.455 0.00 0.00 43.37 3.49
1752 3165 5.885230 TCTGCATAAAATGACAGGAGTTG 57.115 39.130 0.00 0.00 36.08 3.16
1755 3168 5.279384 GCATTCTGCATAAAATGACAGGAG 58.721 41.667 16.48 0.00 44.26 3.69
1780 3193 1.063174 GATTCAAGCGGCACTCATGTC 59.937 52.381 1.45 0.00 0.00 3.06
1792 3205 5.966742 AAACCAACTCTAAGGATTCAAGC 57.033 39.130 0.00 0.00 0.00 4.01
1816 3229 7.778083 TGGTACTAGTACATGGTACTGAAATG 58.222 38.462 29.38 6.56 43.47 2.32
1863 3279 6.766467 AGGTAATCGACTCCCAATTCATAAAC 59.234 38.462 0.00 0.00 0.00 2.01
1879 3295 2.304761 ACAAGAAGGGCAAGGTAATCGA 59.695 45.455 0.00 0.00 0.00 3.59
1944 3363 4.147321 GCCCATCCTTCACATATCACAAT 58.853 43.478 0.00 0.00 0.00 2.71
1951 3370 1.284491 TGCTTGCCCATCCTTCACATA 59.716 47.619 0.00 0.00 0.00 2.29
1952 3371 0.040058 TGCTTGCCCATCCTTCACAT 59.960 50.000 0.00 0.00 0.00 3.21
1953 3372 0.895100 GTGCTTGCCCATCCTTCACA 60.895 55.000 0.00 0.00 0.00 3.58
1954 3373 1.598701 GGTGCTTGCCCATCCTTCAC 61.599 60.000 0.00 0.00 0.00 3.18
1955 3374 1.304381 GGTGCTTGCCCATCCTTCA 60.304 57.895 0.00 0.00 0.00 3.02
1956 3375 0.613012 AAGGTGCTTGCCCATCCTTC 60.613 55.000 0.00 0.00 33.92 3.46
1957 3376 0.704076 TAAGGTGCTTGCCCATCCTT 59.296 50.000 0.00 0.00 40.83 3.36
1963 3382 2.999331 TGATAAGTAAGGTGCTTGCCC 58.001 47.619 0.00 0.00 0.00 5.36
1990 3409 7.172532 TCAGCAAAACAACTGAAATATAGACGT 59.827 33.333 0.00 0.00 39.89 4.34
2034 3454 4.335594 CGAACCAACTGAAATAAGGGATCC 59.664 45.833 1.92 1.92 0.00 3.36
2035 3455 4.941873 ACGAACCAACTGAAATAAGGGATC 59.058 41.667 0.00 0.00 0.00 3.36
2036 3456 4.918588 ACGAACCAACTGAAATAAGGGAT 58.081 39.130 0.00 0.00 0.00 3.85
2037 3457 4.360951 ACGAACCAACTGAAATAAGGGA 57.639 40.909 0.00 0.00 0.00 4.20
2038 3458 4.277423 ACAACGAACCAACTGAAATAAGGG 59.723 41.667 0.00 0.00 0.00 3.95
2039 3459 5.212194 CACAACGAACCAACTGAAATAAGG 58.788 41.667 0.00 0.00 0.00 2.69
2040 3460 5.681105 CACACAACGAACCAACTGAAATAAG 59.319 40.000 0.00 0.00 0.00 1.73
2041 3461 5.124138 ACACACAACGAACCAACTGAAATAA 59.876 36.000 0.00 0.00 0.00 1.40
2053 3473 3.042311 AGCGTAAAACACACAACGAAC 57.958 42.857 0.00 0.00 37.53 3.95
2055 3475 4.270566 ACAATAGCGTAAAACACACAACGA 59.729 37.500 0.00 0.00 37.53 3.85
2056 3476 4.520078 ACAATAGCGTAAAACACACAACG 58.480 39.130 0.00 0.00 38.34 4.10
2061 3481 5.524281 TGAGACAACAATAGCGTAAAACACA 59.476 36.000 0.00 0.00 0.00 3.72
2069 3489 2.501723 AGGGATGAGACAACAATAGCGT 59.498 45.455 0.00 0.00 0.00 5.07
2070 3490 3.185246 AGGGATGAGACAACAATAGCG 57.815 47.619 0.00 0.00 0.00 4.26
2074 3494 3.245016 TGAGCAAGGGATGAGACAACAAT 60.245 43.478 0.00 0.00 0.00 2.71
2075 3495 2.106338 TGAGCAAGGGATGAGACAACAA 59.894 45.455 0.00 0.00 0.00 2.83
2081 3502 1.361204 TGGTTGAGCAAGGGATGAGA 58.639 50.000 0.00 0.00 0.00 3.27
2083 3504 2.673775 TTTGGTTGAGCAAGGGATGA 57.326 45.000 0.00 0.00 0.00 2.92
2103 3524 6.799926 AAAACAGTTGACATTGCAAAAACT 57.200 29.167 1.71 8.66 0.00 2.66
2107 3528 4.694509 AGCAAAAACAGTTGACATTGCAAA 59.305 33.333 19.95 0.00 44.08 3.68
2117 3538 4.096984 AGTGAAGGAGAGCAAAAACAGTTG 59.903 41.667 0.00 0.00 0.00 3.16
2181 3608 8.034313 TGCCTCAAGGACTGATTAAACTATAT 57.966 34.615 0.00 0.00 37.39 0.86
2254 3681 9.903682 AGCATAGCTATTGTTTATAATTTGCAG 57.096 29.630 2.64 0.00 36.99 4.41
2298 3727 9.677567 GCTGAATTGAGTATGTTTTTCAGTTTA 57.322 29.630 10.95 0.00 41.18 2.01
2330 3761 9.373603 ACTACAATGCAATAATTGTACTACGAA 57.626 29.630 6.54 0.00 46.41 3.85
2331 3762 8.936070 ACTACAATGCAATAATTGTACTACGA 57.064 30.769 6.54 0.00 46.41 3.43
2332 3763 9.420966 CAACTACAATGCAATAATTGTACTACG 57.579 33.333 6.54 1.45 46.41 3.51
2377 3811 7.710475 ACCAAAAATGTTAAGAATGTTCAGTGG 59.290 33.333 0.00 0.00 0.00 4.00
2462 3897 1.070445 GGACGGGGATGATCAGCAG 59.930 63.158 13.85 6.06 0.00 4.24
2486 3921 1.475280 TGTAATCGTAGGCTGCGTCTT 59.525 47.619 23.83 19.30 0.00 3.01
2487 3922 1.100510 TGTAATCGTAGGCTGCGTCT 58.899 50.000 23.83 14.48 0.00 4.18
2628 4064 2.386661 ACAGCGGTGGTCAATAAGAG 57.613 50.000 20.20 0.00 0.00 2.85
2733 4182 3.279434 ACTGAAAACGGAGCTGAAGTTT 58.721 40.909 0.00 0.00 39.45 2.66
2739 4188 3.368236 GCTACTTACTGAAAACGGAGCTG 59.632 47.826 0.00 0.00 0.00 4.24
2783 4232 0.238289 CCGATGGTGCGAAATATGCC 59.762 55.000 0.00 0.00 0.00 4.40
2790 4239 0.460109 CATCTGACCGATGGTGCGAA 60.460 55.000 0.00 0.00 44.69 4.70
2839 4290 2.109304 CCCCTTCCTTGGAAGTTAACCA 59.891 50.000 23.12 0.00 35.47 3.67
2862 4313 6.094186 GTGAGATAACCCAGATCCAAAAACTC 59.906 42.308 0.00 0.00 0.00 3.01
2878 4329 3.499918 AGCTTGTTGCACTGTGAGATAAC 59.500 43.478 12.86 10.56 45.94 1.89
2897 4348 0.978907 CCCAGGGCATTTTCAAAGCT 59.021 50.000 0.00 0.00 0.00 3.74
2937 4388 2.028130 AGGCAAAAATGTCACGGTCAA 58.972 42.857 0.00 0.00 0.00 3.18
2940 4391 0.031994 GCAGGCAAAAATGTCACGGT 59.968 50.000 0.00 0.00 0.00 4.83
2942 4393 1.522258 GTTGCAGGCAAAAATGTCACG 59.478 47.619 8.47 0.00 37.70 4.35
2949 4400 2.626840 GTCCAAAGTTGCAGGCAAAAA 58.373 42.857 8.47 0.00 37.70 1.94
2970 4421 5.181245 ACAGAATAACCATCAACAAAGGACG 59.819 40.000 0.00 0.00 0.00 4.79
2996 4447 6.322491 AGAAATGCGCCTTAAAGTCATTTAC 58.678 36.000 4.18 0.00 37.45 2.01
3002 4453 5.048153 AGAAAGAAATGCGCCTTAAAGTC 57.952 39.130 4.18 0.00 0.00 3.01
3008 4459 7.573968 ATCTAATAAGAAAGAAATGCGCCTT 57.426 32.000 4.18 0.00 34.73 4.35
3010 4461 6.858478 GGAATCTAATAAGAAAGAAATGCGCC 59.142 38.462 4.18 0.00 34.73 6.53
3011 4462 7.589221 CAGGAATCTAATAAGAAAGAAATGCGC 59.411 37.037 0.00 0.00 34.73 6.09
3012 4463 8.830580 TCAGGAATCTAATAAGAAAGAAATGCG 58.169 33.333 0.00 0.00 34.73 4.73
3026 4477 9.927081 ATAAGATGGTGTTTTCAGGAATCTAAT 57.073 29.630 0.00 0.00 0.00 1.73
3030 4481 8.571336 CCATATAAGATGGTGTTTTCAGGAATC 58.429 37.037 0.00 0.00 34.56 2.52
3036 4487 5.514169 TGCCCATATAAGATGGTGTTTTCA 58.486 37.500 2.54 0.00 37.48 2.69
3042 4493 6.748333 CAACTATGCCCATATAAGATGGTG 57.252 41.667 2.54 0.00 37.48 4.17
3062 4514 0.321653 ATCACAGGGTCTTCGGCAAC 60.322 55.000 0.00 0.00 0.00 4.17
3063 4515 0.321564 CATCACAGGGTCTTCGGCAA 60.322 55.000 0.00 0.00 0.00 4.52
3064 4516 1.296392 CATCACAGGGTCTTCGGCA 59.704 57.895 0.00 0.00 0.00 5.69
3065 4517 0.535335 TACATCACAGGGTCTTCGGC 59.465 55.000 0.00 0.00 0.00 5.54
3066 4518 1.825474 AGTACATCACAGGGTCTTCGG 59.175 52.381 0.00 0.00 0.00 4.30
3067 4519 4.338400 TCATAGTACATCACAGGGTCTTCG 59.662 45.833 0.00 0.00 0.00 3.79
3068 4520 5.854010 TCATAGTACATCACAGGGTCTTC 57.146 43.478 0.00 0.00 0.00 2.87
3070 4522 6.814954 AATTCATAGTACATCACAGGGTCT 57.185 37.500 0.00 0.00 0.00 3.85
3071 4523 7.604164 CCATAATTCATAGTACATCACAGGGTC 59.396 40.741 0.00 0.00 0.00 4.46
3073 4525 6.372659 GCCATAATTCATAGTACATCACAGGG 59.627 42.308 0.00 0.00 0.00 4.45
3074 4526 6.936335 TGCCATAATTCATAGTACATCACAGG 59.064 38.462 0.00 0.00 0.00 4.00
3076 4528 7.508687 AGTGCCATAATTCATAGTACATCACA 58.491 34.615 0.00 0.00 0.00 3.58
3077 4529 7.657354 TGAGTGCCATAATTCATAGTACATCAC 59.343 37.037 0.00 0.00 0.00 3.06
3080 4532 6.646653 CGTGAGTGCCATAATTCATAGTACAT 59.353 38.462 0.00 0.00 0.00 2.29
3081 4533 5.983118 CGTGAGTGCCATAATTCATAGTACA 59.017 40.000 0.00 0.00 0.00 2.90
3082 4534 5.107453 GCGTGAGTGCCATAATTCATAGTAC 60.107 44.000 0.00 0.00 0.00 2.73
3084 4536 3.809832 GCGTGAGTGCCATAATTCATAGT 59.190 43.478 0.00 0.00 0.00 2.12
3085 4537 4.060900 AGCGTGAGTGCCATAATTCATAG 58.939 43.478 0.00 0.00 34.65 2.23
3087 4539 2.923121 AGCGTGAGTGCCATAATTCAT 58.077 42.857 0.00 0.00 34.65 2.57
3089 4541 3.194861 TGTAGCGTGAGTGCCATAATTC 58.805 45.455 0.00 0.00 34.65 2.17
3090 4542 3.260475 TGTAGCGTGAGTGCCATAATT 57.740 42.857 0.00 0.00 34.65 1.40
3091 4543 2.979814 TGTAGCGTGAGTGCCATAAT 57.020 45.000 0.00 0.00 34.65 1.28
3093 4545 2.979814 AATGTAGCGTGAGTGCCATA 57.020 45.000 0.00 0.00 34.65 2.74
3095 4547 2.430694 AGATAATGTAGCGTGAGTGCCA 59.569 45.455 0.00 0.00 34.65 4.92
3096 4548 2.797156 CAGATAATGTAGCGTGAGTGCC 59.203 50.000 0.00 0.00 34.65 5.01
3097 4549 3.706698 TCAGATAATGTAGCGTGAGTGC 58.293 45.455 0.00 0.00 0.00 4.40
3098 4550 4.208047 GCTTCAGATAATGTAGCGTGAGTG 59.792 45.833 0.00 0.00 41.66 3.51
3099 4551 4.363999 GCTTCAGATAATGTAGCGTGAGT 58.636 43.478 0.00 0.00 41.66 3.41
3100 4552 4.963237 GCTTCAGATAATGTAGCGTGAG 57.037 45.455 0.00 0.00 41.66 3.51
3106 4558 6.615264 AACATGCTGCTTCAGATAATGTAG 57.385 37.500 0.00 0.00 33.63 2.74
3107 4559 7.337689 AGAAAACATGCTGCTTCAGATAATGTA 59.662 33.333 0.00 0.00 33.63 2.29
3108 4560 5.909621 AAACATGCTGCTTCAGATAATGT 57.090 34.783 0.00 0.00 35.03 2.71
3109 4561 6.472486 CAGAAAACATGCTGCTTCAGATAATG 59.528 38.462 0.00 0.00 32.44 1.90
3110 4562 6.376299 TCAGAAAACATGCTGCTTCAGATAAT 59.624 34.615 0.00 0.00 32.44 1.28
3111 4563 5.706833 TCAGAAAACATGCTGCTTCAGATAA 59.293 36.000 0.00 0.00 32.44 1.75
3112 4564 5.247862 TCAGAAAACATGCTGCTTCAGATA 58.752 37.500 0.00 0.00 32.44 1.98
3113 4565 4.077108 TCAGAAAACATGCTGCTTCAGAT 58.923 39.130 0.00 0.00 32.44 2.90
3114 4566 3.479489 TCAGAAAACATGCTGCTTCAGA 58.521 40.909 0.00 0.00 32.44 3.27
3115 4567 3.909776 TCAGAAAACATGCTGCTTCAG 57.090 42.857 0.00 0.00 32.27 3.02
3116 4568 4.652421 TTTCAGAAAACATGCTGCTTCA 57.348 36.364 0.00 0.00 32.27 3.02
3117 4569 6.535274 AAATTTCAGAAAACATGCTGCTTC 57.465 33.333 0.00 0.00 32.27 3.86
3118 4570 7.212274 AGTAAATTTCAGAAAACATGCTGCTT 58.788 30.769 0.00 0.00 32.27 3.91
3119 4571 6.752168 AGTAAATTTCAGAAAACATGCTGCT 58.248 32.000 0.00 0.00 32.27 4.24
3120 4572 7.809806 AGTAGTAAATTTCAGAAAACATGCTGC 59.190 33.333 0.00 0.00 32.27 5.25
3121 4573 9.334693 GAGTAGTAAATTTCAGAAAACATGCTG 57.665 33.333 0.00 0.00 0.00 4.41
3122 4574 8.515414 GGAGTAGTAAATTTCAGAAAACATGCT 58.485 33.333 0.00 1.46 0.00 3.79
3123 4575 7.755373 GGGAGTAGTAAATTTCAGAAAACATGC 59.245 37.037 0.00 0.00 0.00 4.06
3124 4576 9.014297 AGGGAGTAGTAAATTTCAGAAAACATG 57.986 33.333 0.00 0.00 0.00 3.21
3125 4577 9.588096 AAGGGAGTAGTAAATTTCAGAAAACAT 57.412 29.630 0.00 0.00 0.00 2.71
3126 4578 8.990163 AAGGGAGTAGTAAATTTCAGAAAACA 57.010 30.769 0.00 0.00 0.00 2.83
3127 4579 8.228464 CGAAGGGAGTAGTAAATTTCAGAAAAC 58.772 37.037 0.00 0.00 0.00 2.43
3128 4580 8.152246 TCGAAGGGAGTAGTAAATTTCAGAAAA 58.848 33.333 0.00 0.00 0.00 2.29
3129 4581 7.673180 TCGAAGGGAGTAGTAAATTTCAGAAA 58.327 34.615 0.00 0.00 0.00 2.52
3130 4582 7.235935 TCGAAGGGAGTAGTAAATTTCAGAA 57.764 36.000 0.00 0.00 0.00 3.02
3131 4583 6.845758 TCGAAGGGAGTAGTAAATTTCAGA 57.154 37.500 0.00 0.00 0.00 3.27
3132 4584 7.493367 AGATCGAAGGGAGTAGTAAATTTCAG 58.507 38.462 0.00 0.00 0.00 3.02
3133 4585 7.419711 AGATCGAAGGGAGTAGTAAATTTCA 57.580 36.000 0.00 0.00 0.00 2.69
3141 4593 9.233649 CAAGTAATATAGATCGAAGGGAGTAGT 57.766 37.037 0.00 0.00 0.00 2.73
3142 4594 8.185505 GCAAGTAATATAGATCGAAGGGAGTAG 58.814 40.741 0.00 0.00 0.00 2.57
3143 4595 7.122353 GGCAAGTAATATAGATCGAAGGGAGTA 59.878 40.741 0.00 0.00 0.00 2.59
3144 4596 6.071278 GGCAAGTAATATAGATCGAAGGGAGT 60.071 42.308 0.00 0.00 0.00 3.85
3145 4597 6.153680 AGGCAAGTAATATAGATCGAAGGGAG 59.846 42.308 0.00 0.00 0.00 4.30
3146 4598 6.017192 AGGCAAGTAATATAGATCGAAGGGA 58.983 40.000 0.00 0.00 0.00 4.20
3147 4599 6.153680 AGAGGCAAGTAATATAGATCGAAGGG 59.846 42.308 0.00 0.00 0.00 3.95
3148 4600 7.094162 TGAGAGGCAAGTAATATAGATCGAAGG 60.094 40.741 0.00 0.00 0.00 3.46
3149 4601 7.821652 TGAGAGGCAAGTAATATAGATCGAAG 58.178 38.462 0.00 0.00 0.00 3.79
3150 4602 7.761038 TGAGAGGCAAGTAATATAGATCGAA 57.239 36.000 0.00 0.00 0.00 3.71
3151 4603 7.946381 ATGAGAGGCAAGTAATATAGATCGA 57.054 36.000 0.00 0.00 0.00 3.59
3152 4604 8.246871 TGAATGAGAGGCAAGTAATATAGATCG 58.753 37.037 0.00 0.00 0.00 3.69
3153 4605 9.585099 CTGAATGAGAGGCAAGTAATATAGATC 57.415 37.037 0.00 0.00 0.00 2.75
3154 4606 9.319060 TCTGAATGAGAGGCAAGTAATATAGAT 57.681 33.333 0.00 0.00 0.00 1.98
3155 4607 8.712228 TCTGAATGAGAGGCAAGTAATATAGA 57.288 34.615 0.00 0.00 0.00 1.98
3156 4608 8.984891 CTCTGAATGAGAGGCAAGTAATATAG 57.015 38.462 0.00 0.00 44.25 1.31
3170 4622 1.829849 CAGCACTCCCTCTGAATGAGA 59.170 52.381 9.37 0.00 45.39 3.27
3171 4623 1.554160 ACAGCACTCCCTCTGAATGAG 59.446 52.381 0.00 2.52 42.30 2.90
3172 4624 1.649321 ACAGCACTCCCTCTGAATGA 58.351 50.000 0.00 0.00 34.57 2.57
3173 4625 3.834489 ATACAGCACTCCCTCTGAATG 57.166 47.619 0.00 0.00 34.57 2.67
3174 4626 4.851639 AAATACAGCACTCCCTCTGAAT 57.148 40.909 0.00 0.00 34.57 2.57
3175 4627 4.640771 AAAATACAGCACTCCCTCTGAA 57.359 40.909 0.00 0.00 34.57 3.02
3176 4628 4.640771 AAAAATACAGCACTCCCTCTGA 57.359 40.909 0.00 0.00 34.57 3.27
3177 4629 8.682936 ATAATAAAAATACAGCACTCCCTCTG 57.317 34.615 0.00 0.00 36.45 3.35
3178 4630 9.780186 GTATAATAAAAATACAGCACTCCCTCT 57.220 33.333 0.00 0.00 31.43 3.69
3179 4631 9.780186 AGTATAATAAAAATACAGCACTCCCTC 57.220 33.333 0.00 0.00 33.15 4.30
3180 4632 9.780186 GAGTATAATAAAAATACAGCACTCCCT 57.220 33.333 0.00 0.00 33.15 4.20
3181 4633 9.000486 GGAGTATAATAAAAATACAGCACTCCC 58.000 37.037 0.00 0.00 41.50 4.30
3182 4634 9.780186 AGGAGTATAATAAAAATACAGCACTCC 57.220 33.333 0.00 0.00 45.58 3.85
3184 4636 9.057089 GCAGGAGTATAATAAAAATACAGCACT 57.943 33.333 0.00 0.00 33.15 4.40
3185 4637 9.057089 AGCAGGAGTATAATAAAAATACAGCAC 57.943 33.333 0.00 0.00 33.15 4.40
3186 4638 9.627123 AAGCAGGAGTATAATAAAAATACAGCA 57.373 29.630 0.00 0.00 33.15 4.41
3210 4662 3.911989 CAGCTATTGCAGGCGAAAG 57.088 52.632 1.12 0.00 42.74 2.62
3240 4692 3.157881 TCAATGGCCACGATGGTTTTTA 58.842 40.909 8.16 0.00 40.46 1.52
3241 4693 1.967066 TCAATGGCCACGATGGTTTTT 59.033 42.857 8.16 0.00 40.46 1.94
3245 4697 0.327924 TTCTCAATGGCCACGATGGT 59.672 50.000 8.16 0.00 40.46 3.55
3247 4699 1.019673 CCTTCTCAATGGCCACGATG 58.980 55.000 8.16 8.31 0.00 3.84
3248 4700 0.749454 GCCTTCTCAATGGCCACGAT 60.749 55.000 8.16 0.00 43.11 3.73
3249 4701 1.377202 GCCTTCTCAATGGCCACGA 60.377 57.895 8.16 7.13 43.11 4.35
3250 4702 3.190878 GCCTTCTCAATGGCCACG 58.809 61.111 8.16 1.50 43.11 4.94
3261 4713 1.602377 CGACCGTTTTCTTTGCCTTCT 59.398 47.619 0.00 0.00 0.00 2.85
3272 4724 4.376311 GCTATTTTGTCGTACGACCGTTTT 60.376 41.667 37.57 23.35 43.97 2.43
3273 4725 3.121778 GCTATTTTGTCGTACGACCGTTT 59.878 43.478 37.57 24.53 43.97 3.60
3274 4726 2.663119 GCTATTTTGTCGTACGACCGTT 59.337 45.455 37.57 24.23 43.97 4.44
3275 4727 2.095059 AGCTATTTTGTCGTACGACCGT 60.095 45.455 37.57 24.67 43.97 4.83
3280 4732 6.866179 AGTTTCTAGCTATTTTGTCGTACG 57.134 37.500 9.53 9.53 0.00 3.67
3285 4737 7.435068 TGGACAAGTTTCTAGCTATTTTGTC 57.565 36.000 18.11 18.11 41.12 3.18
3295 4747 7.307042 CGCATGAATCTATGGACAAGTTTCTAG 60.307 40.741 0.00 0.00 0.00 2.43
3298 4750 5.504665 CCGCATGAATCTATGGACAAGTTTC 60.505 44.000 0.00 0.00 0.00 2.78
3300 4752 3.879295 CCGCATGAATCTATGGACAAGTT 59.121 43.478 0.00 0.00 0.00 2.66
3302 4754 2.225019 GCCGCATGAATCTATGGACAAG 59.775 50.000 0.00 0.00 0.00 3.16
3303 4755 2.221169 GCCGCATGAATCTATGGACAA 58.779 47.619 0.00 0.00 0.00 3.18
3304 4756 1.140652 TGCCGCATGAATCTATGGACA 59.859 47.619 0.00 0.00 0.00 4.02
3305 4757 1.882912 TGCCGCATGAATCTATGGAC 58.117 50.000 0.00 0.00 0.00 4.02
3322 4774 3.944015 AGTAAGGAGAATGTTGCTCATGC 59.056 43.478 0.00 0.00 36.81 4.06
3325 4777 3.338249 GCAGTAAGGAGAATGTTGCTCA 58.662 45.455 0.00 0.00 34.07 4.26
3326 4778 2.680339 GGCAGTAAGGAGAATGTTGCTC 59.320 50.000 0.00 0.00 0.00 4.26
3327 4779 2.619074 GGGCAGTAAGGAGAATGTTGCT 60.619 50.000 0.00 0.00 0.00 3.91
3328 4780 1.745653 GGGCAGTAAGGAGAATGTTGC 59.254 52.381 0.00 0.00 0.00 4.17
3346 4841 4.866508 TGTTCTCTGTTGTACTGTAGGG 57.133 45.455 0.00 0.00 0.00 3.53
3347 4842 5.597806 TGTTGTTCTCTGTTGTACTGTAGG 58.402 41.667 0.00 0.00 0.00 3.18
3353 4848 7.478520 ACATAGTTGTTGTTCTCTGTTGTAC 57.521 36.000 0.00 0.00 29.55 2.90
3372 4867 1.032794 TCTGGCAGGCTCGTACATAG 58.967 55.000 15.73 0.00 0.00 2.23
3376 4871 0.100861 GTAGTCTGGCAGGCTCGTAC 59.899 60.000 27.25 15.01 29.80 3.67
3382 4877 2.184579 GACGGTAGTCTGGCAGGC 59.815 66.667 12.08 12.08 43.80 4.85
3390 4885 3.493873 AACCTTTGTTGGAGACGGTAGTC 60.494 47.826 0.00 0.00 39.39 2.59
3396 4891 1.676006 AGCAAACCTTTGTTGGAGACG 59.324 47.619 0.00 0.00 40.24 4.18
3397 4892 2.799562 GCAGCAAACCTTTGTTGGAGAC 60.800 50.000 14.21 0.00 45.67 3.36
3399 4894 1.136695 TGCAGCAAACCTTTGTTGGAG 59.863 47.619 14.21 0.00 45.67 3.86
3400 4895 1.134848 GTGCAGCAAACCTTTGTTGGA 60.135 47.619 14.21 9.90 45.67 3.53
3415 4910 0.313043 CTGTTTCCAAGGCTGTGCAG 59.687 55.000 0.00 0.00 0.00 4.41
3416 4911 1.737355 GCTGTTTCCAAGGCTGTGCA 61.737 55.000 0.00 0.00 0.00 4.57
3417 4912 1.006922 GCTGTTTCCAAGGCTGTGC 60.007 57.895 0.00 0.00 0.00 4.57
3423 4918 1.168714 GCTGGTAGCTGTTTCCAAGG 58.831 55.000 0.00 0.00 38.45 3.61
3424 4919 1.168714 GGCTGGTAGCTGTTTCCAAG 58.831 55.000 0.00 0.00 41.99 3.61
3453 4948 5.676552 TGTGTAGTTTTGCTTCTCCTTGTA 58.323 37.500 0.00 0.00 0.00 2.41
3458 4953 3.503748 AGCATGTGTAGTTTTGCTTCTCC 59.496 43.478 0.00 0.00 42.52 3.71
3464 4959 2.061028 GCCAAGCATGTGTAGTTTTGC 58.939 47.619 0.00 0.00 35.34 3.68
3479 4974 4.525912 AGGAAAATGTAGCTTTGCCAAG 57.474 40.909 0.00 0.00 36.40 3.61
3480 4975 4.343526 TGAAGGAAAATGTAGCTTTGCCAA 59.656 37.500 0.00 0.00 36.40 4.52
3496 4991 8.528643 TGAACGAAATCTATAGTTCTGAAGGAA 58.471 33.333 0.00 0.00 42.29 3.36
3506 5001 7.147724 TGGAACCTCATGAACGAAATCTATAGT 60.148 37.037 0.00 0.00 0.00 2.12
3516 5011 3.056107 CCTACTTGGAACCTCATGAACGA 60.056 47.826 0.00 0.00 38.35 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.