Multiple sequence alignment - TraesCS7B01G097600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G097600 chr7B 100.000 3721 0 0 1 3721 112340499 112336779 0.000000e+00 6872
1 TraesCS7B01G097600 chr7B 90.433 554 47 6 3171 3721 67901707 67902257 0.000000e+00 725
2 TraesCS7B01G097600 chr7B 88.645 546 61 1 3177 3721 167582244 167581699 0.000000e+00 664
3 TraesCS7B01G097600 chr7B 71.788 1074 218 67 1681 2706 112297817 112296781 3.740000e-55 226
4 TraesCS7B01G097600 chr4B 97.666 1971 38 3 906 2875 402764164 402762201 0.000000e+00 3378
5 TraesCS7B01G097600 chr4B 90.476 546 50 2 3177 3721 107240772 107240228 0.000000e+00 719
6 TraesCS7B01G097600 chr4B 96.806 407 4 4 2880 3281 402762162 402761760 0.000000e+00 671
7 TraesCS7B01G097600 chr4B 92.857 210 15 0 378 587 586765933 586765724 4.670000e-79 305
8 TraesCS7B01G097600 chr4B 90.952 210 19 0 378 587 586766213 586766004 2.190000e-72 283
9 TraesCS7B01G097600 chr4B 72.104 1079 205 78 1681 2706 402738372 402737337 1.730000e-58 237
10 TraesCS7B01G097600 chr7A 93.375 1434 61 14 1354 2767 150420151 150418732 0.000000e+00 2091
11 TraesCS7B01G097600 chr7A 86.771 446 22 9 906 1324 150420584 150420149 2.620000e-126 462
12 TraesCS7B01G097600 chr7A 90.323 155 14 1 228 382 89388146 89388299 6.300000e-48 202
13 TraesCS7B01G097600 chr7A 71.402 1077 220 74 1681 2706 150329510 150328471 6.300000e-48 202
14 TraesCS7B01G097600 chr7D 94.882 1270 53 5 1616 2875 150604049 150602782 0.000000e+00 1975
15 TraesCS7B01G097600 chr7D 91.273 825 38 11 587 1390 150605167 150604356 0.000000e+00 1094
16 TraesCS7B01G097600 chr7D 92.395 263 15 3 2880 3140 150602743 150602484 1.630000e-98 370
17 TraesCS7B01G097600 chr7D 92.118 203 16 0 30 232 551804713 551804915 1.690000e-73 287
18 TraesCS7B01G097600 chr7D 92.040 201 14 2 33 232 151402164 151401965 7.870000e-72 281
19 TraesCS7B01G097600 chr7D 91.626 203 17 0 30 232 637225682 637225884 7.870000e-72 281
20 TraesCS7B01G097600 chr7D 71.241 1064 230 62 1687 2706 149849626 149848595 2.270000e-47 200
21 TraesCS7B01G097600 chr7D 85.246 122 13 5 1446 1563 150604169 150604049 1.820000e-23 121
22 TraesCS7B01G097600 chr6B 90.710 549 45 5 3177 3721 703221755 703221209 0.000000e+00 726
23 TraesCS7B01G097600 chr6B 88.022 551 58 7 3173 3721 136109412 136108868 0.000000e+00 645
24 TraesCS7B01G097600 chr6B 94.000 200 12 0 33 232 713043764 713043565 1.680000e-78 303
25 TraesCS7B01G097600 chr6B 90.850 153 13 1 228 380 585903979 585904130 1.750000e-48 204
26 TraesCS7B01G097600 chr5B 90.328 548 53 0 3174 3721 418312796 418313343 0.000000e+00 719
27 TraesCS7B01G097600 chr5B 90.995 211 17 2 378 587 348580601 348580810 2.190000e-72 283
28 TraesCS7B01G097600 chr5B 89.238 223 22 2 378 599 75336720 75336499 1.020000e-70 278
29 TraesCS7B01G097600 chr5B 90.047 211 20 1 378 587 411086487 411086277 4.740000e-69 272
30 TraesCS7B01G097600 chr5B 89.671 213 16 6 378 587 560447280 560447071 2.200000e-67 267
31 TraesCS7B01G097600 chr5B 93.151 146 9 1 228 373 397682649 397682505 2.910000e-51 213
32 TraesCS7B01G097600 chr5B 91.503 153 12 1 228 380 269946423 269946272 3.770000e-50 209
33 TraesCS7B01G097600 chr2B 90.293 546 52 1 3177 3721 56073186 56072641 0.000000e+00 713
34 TraesCS7B01G097600 chr2B 88.160 549 63 2 3174 3721 785095221 785095768 0.000000e+00 652
35 TraesCS7B01G097600 chr2B 93.919 148 9 0 234 381 694533817 694533964 1.340000e-54 224
36 TraesCS7B01G097600 chr2B 91.391 151 13 0 229 379 608941098 608941248 1.350000e-49 207
37 TraesCS7B01G097600 chr2B 90.000 160 13 3 227 385 59081066 59081223 1.750000e-48 204
38 TraesCS7B01G097600 chr1B 88.909 550 53 3 3177 3719 612924893 612924345 0.000000e+00 671
39 TraesCS7B01G097600 chr1B 81.944 144 26 0 55 198 646169499 646169642 5.050000e-24 122
40 TraesCS7B01G097600 chr3B 93.103 232 16 0 1 232 530776071 530776302 1.280000e-89 340
41 TraesCS7B01G097600 chr3B 88.797 241 19 5 348 581 96073075 96073314 4.700000e-74 289
42 TraesCS7B01G097600 chr3B 86.056 251 30 5 337 586 154763524 154763770 7.920000e-67 265
43 TraesCS7B01G097600 chr3B 92.208 154 11 1 228 381 575219609 575219761 2.250000e-52 217
44 TraesCS7B01G097600 chr3B 90.446 157 15 0 229 385 659778766 659778922 1.350000e-49 207
45 TraesCS7B01G097600 chr1D 91.133 203 18 0 30 232 250594181 250594383 3.660000e-70 276
46 TraesCS7B01G097600 chr5D 91.000 200 18 0 33 232 480550928 480550729 1.700000e-68 270
47 TraesCS7B01G097600 chr5A 89.623 212 18 4 378 587 510187669 510187878 2.200000e-67 267
48 TraesCS7B01G097600 chr5A 90.816 196 18 0 1 196 680875993 680875798 2.850000e-66 263
49 TraesCS7B01G097600 chr5A 94.483 145 8 0 234 378 441172755 441172899 1.340000e-54 224
50 TraesCS7B01G097600 chr5A 94.483 145 8 0 234 378 673688715 673688859 1.340000e-54 224
51 TraesCS7B01G097600 chr5A 93.836 146 9 0 234 379 510187734 510187879 1.740000e-53 220
52 TraesCS7B01G097600 chr3A 80.882 340 58 7 256 590 716097015 716097352 1.030000e-65 261
53 TraesCS7B01G097600 chr2A 94.340 159 9 0 1 159 231365361 231365519 1.030000e-60 244
54 TraesCS7B01G097600 chr2A 92.903 155 11 0 235 389 652999334 652999180 3.740000e-55 226
55 TraesCS7B01G097600 chr2A 93.289 149 10 0 234 382 459967884 459968032 1.740000e-53 220
56 TraesCS7B01G097600 chr6A 94.079 152 9 0 234 385 566424004 566424155 8.040000e-57 231
57 TraesCS7B01G097600 chr6A 93.421 152 9 1 234 384 320737710 320737559 1.340000e-54 224
58 TraesCS7B01G097600 chr2D 89.071 183 19 1 9 191 270847581 270847400 3.740000e-55 226
59 TraesCS7B01G097600 chr4A 91.781 146 11 1 228 373 587156211 587156355 6.300000e-48 202


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G097600 chr7B 112336779 112340499 3720 True 6872.0 6872 100.000 1 3721 1 chr7B.!!$R2 3720
1 TraesCS7B01G097600 chr7B 67901707 67902257 550 False 725.0 725 90.433 3171 3721 1 chr7B.!!$F1 550
2 TraesCS7B01G097600 chr7B 167581699 167582244 545 True 664.0 664 88.645 3177 3721 1 chr7B.!!$R3 544
3 TraesCS7B01G097600 chr7B 112296781 112297817 1036 True 226.0 226 71.788 1681 2706 1 chr7B.!!$R1 1025
4 TraesCS7B01G097600 chr4B 402761760 402764164 2404 True 2024.5 3378 97.236 906 3281 2 chr4B.!!$R3 2375
5 TraesCS7B01G097600 chr4B 107240228 107240772 544 True 719.0 719 90.476 3177 3721 1 chr4B.!!$R1 544
6 TraesCS7B01G097600 chr4B 402737337 402738372 1035 True 237.0 237 72.104 1681 2706 1 chr4B.!!$R2 1025
7 TraesCS7B01G097600 chr7A 150418732 150420584 1852 True 1276.5 2091 90.073 906 2767 2 chr7A.!!$R2 1861
8 TraesCS7B01G097600 chr7A 150328471 150329510 1039 True 202.0 202 71.402 1681 2706 1 chr7A.!!$R1 1025
9 TraesCS7B01G097600 chr7D 150602484 150605167 2683 True 890.0 1975 90.949 587 3140 4 chr7D.!!$R3 2553
10 TraesCS7B01G097600 chr6B 703221209 703221755 546 True 726.0 726 90.710 3177 3721 1 chr6B.!!$R2 544
11 TraesCS7B01G097600 chr6B 136108868 136109412 544 True 645.0 645 88.022 3173 3721 1 chr6B.!!$R1 548
12 TraesCS7B01G097600 chr5B 418312796 418313343 547 False 719.0 719 90.328 3174 3721 1 chr5B.!!$F2 547
13 TraesCS7B01G097600 chr2B 56072641 56073186 545 True 713.0 713 90.293 3177 3721 1 chr2B.!!$R1 544
14 TraesCS7B01G097600 chr2B 785095221 785095768 547 False 652.0 652 88.160 3174 3721 1 chr2B.!!$F4 547
15 TraesCS7B01G097600 chr1B 612924345 612924893 548 True 671.0 671 88.909 3177 3719 1 chr1B.!!$R1 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.033796 AGTTCGGTGGATCGAGGGTA 60.034 55.0 0.00 0.00 40.42 3.69 F
88 89 0.101939 GTTCGGTGGATCGAGGGTAC 59.898 60.0 0.00 0.00 40.42 3.34 F
440 441 0.184933 CCTCTTTTGTGTGGGTCCCA 59.815 55.0 6.47 6.47 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1991 2204 0.034896 GCCGGAACTTGTTCTCCTCA 59.965 55.000 5.05 0.0 0.0 3.86 R
2444 2687 2.355193 GCCCAGCTCCTTCTCGTCT 61.355 63.158 0.00 0.0 0.0 4.18 R
2875 3135 0.106967 TACCAAAGCACACCACAGCA 60.107 50.000 0.00 0.0 0.0 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.483954 GCAGCTGGCAAGATAGGAA 57.516 52.632 17.12 0.00 43.97 3.36
40 41 1.978454 GCAGCTGGCAAGATAGGAAT 58.022 50.000 17.12 0.00 43.97 3.01
41 42 2.305009 GCAGCTGGCAAGATAGGAATT 58.695 47.619 17.12 0.00 43.97 2.17
42 43 3.480470 GCAGCTGGCAAGATAGGAATTA 58.520 45.455 17.12 0.00 43.97 1.40
43 44 3.501445 GCAGCTGGCAAGATAGGAATTAG 59.499 47.826 17.12 0.00 43.97 1.73
44 45 4.070716 CAGCTGGCAAGATAGGAATTAGG 58.929 47.826 5.57 0.00 0.00 2.69
45 46 3.718956 AGCTGGCAAGATAGGAATTAGGT 59.281 43.478 0.00 0.00 0.00 3.08
46 47 3.817647 GCTGGCAAGATAGGAATTAGGTG 59.182 47.826 0.00 0.00 0.00 4.00
47 48 4.687219 GCTGGCAAGATAGGAATTAGGTGT 60.687 45.833 0.00 0.00 0.00 4.16
48 49 5.036117 TGGCAAGATAGGAATTAGGTGTC 57.964 43.478 0.00 0.00 0.00 3.67
49 50 4.473196 TGGCAAGATAGGAATTAGGTGTCA 59.527 41.667 0.00 0.00 0.00 3.58
50 51 5.059833 GGCAAGATAGGAATTAGGTGTCAG 58.940 45.833 0.00 0.00 0.00 3.51
51 52 5.059833 GCAAGATAGGAATTAGGTGTCAGG 58.940 45.833 0.00 0.00 0.00 3.86
52 53 4.965200 AGATAGGAATTAGGTGTCAGGC 57.035 45.455 0.00 0.00 0.00 4.85
53 54 3.648545 AGATAGGAATTAGGTGTCAGGCC 59.351 47.826 0.00 0.00 0.00 5.19
54 55 1.972588 AGGAATTAGGTGTCAGGCCT 58.027 50.000 0.00 0.00 40.00 5.19
55 56 1.840635 AGGAATTAGGTGTCAGGCCTC 59.159 52.381 0.00 0.00 37.54 4.70
56 57 1.473434 GGAATTAGGTGTCAGGCCTCG 60.473 57.143 0.00 0.00 37.54 4.63
57 58 0.541863 AATTAGGTGTCAGGCCTCGG 59.458 55.000 0.00 0.00 37.54 4.63
58 59 0.617820 ATTAGGTGTCAGGCCTCGGT 60.618 55.000 0.00 0.00 37.54 4.69
59 60 1.541310 TTAGGTGTCAGGCCTCGGTG 61.541 60.000 0.00 0.00 37.54 4.94
60 61 2.725127 TAGGTGTCAGGCCTCGGTGT 62.725 60.000 0.00 0.00 37.54 4.16
61 62 2.426023 GTGTCAGGCCTCGGTGTT 59.574 61.111 0.00 0.00 0.00 3.32
62 63 1.227853 GTGTCAGGCCTCGGTGTTT 60.228 57.895 0.00 0.00 0.00 2.83
63 64 1.070786 TGTCAGGCCTCGGTGTTTC 59.929 57.895 0.00 0.00 0.00 2.78
64 65 2.027625 GTCAGGCCTCGGTGTTTCG 61.028 63.158 0.00 0.00 0.00 3.46
65 66 2.742372 CAGGCCTCGGTGTTTCGG 60.742 66.667 0.00 0.00 0.00 4.30
66 67 3.239253 AGGCCTCGGTGTTTCGGT 61.239 61.111 0.00 0.00 0.00 4.69
67 68 2.741211 GGCCTCGGTGTTTCGGTC 60.741 66.667 0.00 0.00 0.00 4.79
68 69 2.029964 GCCTCGGTGTTTCGGTCA 59.970 61.111 0.00 0.00 0.00 4.02
69 70 2.027625 GCCTCGGTGTTTCGGTCAG 61.028 63.158 0.00 0.00 0.00 3.51
70 71 1.366366 CCTCGGTGTTTCGGTCAGT 59.634 57.895 0.00 0.00 0.00 3.41
71 72 0.249741 CCTCGGTGTTTCGGTCAGTT 60.250 55.000 0.00 0.00 0.00 3.16
72 73 1.137513 CTCGGTGTTTCGGTCAGTTC 58.862 55.000 0.00 0.00 0.00 3.01
73 74 0.595567 TCGGTGTTTCGGTCAGTTCG 60.596 55.000 0.00 0.00 0.00 3.95
74 75 1.554042 CGGTGTTTCGGTCAGTTCGG 61.554 60.000 0.00 0.00 0.00 4.30
75 76 0.531311 GGTGTTTCGGTCAGTTCGGT 60.531 55.000 0.00 0.00 0.00 4.69
76 77 0.580104 GTGTTTCGGTCAGTTCGGTG 59.420 55.000 0.00 0.00 0.00 4.94
77 78 0.531090 TGTTTCGGTCAGTTCGGTGG 60.531 55.000 0.00 0.00 0.00 4.61
78 79 0.249573 GTTTCGGTCAGTTCGGTGGA 60.250 55.000 0.00 0.00 0.00 4.02
79 80 0.682852 TTTCGGTCAGTTCGGTGGAT 59.317 50.000 0.00 0.00 0.00 3.41
80 81 0.245539 TTCGGTCAGTTCGGTGGATC 59.754 55.000 0.00 0.00 0.00 3.36
81 82 1.516386 CGGTCAGTTCGGTGGATCG 60.516 63.158 0.00 0.00 0.00 3.69
82 83 1.888018 GGTCAGTTCGGTGGATCGA 59.112 57.895 0.00 0.00 37.38 3.59
83 84 0.179134 GGTCAGTTCGGTGGATCGAG 60.179 60.000 0.00 0.00 40.42 4.04
84 85 0.179134 GTCAGTTCGGTGGATCGAGG 60.179 60.000 0.00 0.00 40.42 4.63
85 86 1.141881 CAGTTCGGTGGATCGAGGG 59.858 63.158 0.00 0.00 40.42 4.30
86 87 1.305046 AGTTCGGTGGATCGAGGGT 60.305 57.895 0.00 0.00 40.42 4.34
87 88 0.033796 AGTTCGGTGGATCGAGGGTA 60.034 55.000 0.00 0.00 40.42 3.69
88 89 0.101939 GTTCGGTGGATCGAGGGTAC 59.898 60.000 0.00 0.00 40.42 3.34
89 90 0.323633 TTCGGTGGATCGAGGGTACA 60.324 55.000 0.00 0.00 40.42 2.90
90 91 0.750546 TCGGTGGATCGAGGGTACAG 60.751 60.000 0.00 0.00 34.82 2.74
91 92 0.750546 CGGTGGATCGAGGGTACAGA 60.751 60.000 0.00 0.00 0.00 3.41
92 93 0.745468 GGTGGATCGAGGGTACAGAC 59.255 60.000 0.00 0.00 0.00 3.51
93 94 0.745468 GTGGATCGAGGGTACAGACC 59.255 60.000 0.00 0.00 46.13 3.85
103 104 1.636988 GGTACAGACCGAATTCACCG 58.363 55.000 6.22 0.00 35.52 4.94
104 105 1.203052 GGTACAGACCGAATTCACCGA 59.797 52.381 6.22 0.00 35.52 4.69
105 106 2.353011 GGTACAGACCGAATTCACCGAA 60.353 50.000 6.22 0.00 35.52 4.30
106 107 1.792006 ACAGACCGAATTCACCGAAC 58.208 50.000 6.22 0.00 0.00 3.95
107 108 1.343465 ACAGACCGAATTCACCGAACT 59.657 47.619 6.22 0.00 0.00 3.01
108 109 2.224209 ACAGACCGAATTCACCGAACTT 60.224 45.455 6.22 0.00 0.00 2.66
109 110 3.006110 ACAGACCGAATTCACCGAACTTA 59.994 43.478 6.22 0.00 0.00 2.24
110 111 3.991773 CAGACCGAATTCACCGAACTTAA 59.008 43.478 6.22 0.00 0.00 1.85
111 112 4.630069 CAGACCGAATTCACCGAACTTAAT 59.370 41.667 6.22 0.00 0.00 1.40
112 113 5.121768 CAGACCGAATTCACCGAACTTAATT 59.878 40.000 6.22 0.00 0.00 1.40
113 114 5.350640 AGACCGAATTCACCGAACTTAATTC 59.649 40.000 6.22 0.00 35.80 2.17
129 130 8.965986 AACTTAATTCGGTCTTTTAGAATTGC 57.034 30.769 11.48 0.00 42.44 3.56
130 131 8.336801 ACTTAATTCGGTCTTTTAGAATTGCT 57.663 30.769 11.48 0.00 42.44 3.91
131 132 9.444600 ACTTAATTCGGTCTTTTAGAATTGCTA 57.555 29.630 11.48 0.00 42.44 3.49
134 135 6.490566 TTCGGTCTTTTAGAATTGCTAACC 57.509 37.500 0.00 0.00 38.76 2.85
135 136 4.628333 TCGGTCTTTTAGAATTGCTAACCG 59.372 41.667 6.39 6.39 44.99 4.44
136 137 4.628333 CGGTCTTTTAGAATTGCTAACCGA 59.372 41.667 6.78 0.00 45.82 4.69
137 138 5.220416 CGGTCTTTTAGAATTGCTAACCGAG 60.220 44.000 6.78 0.00 45.82 4.63
148 149 2.642139 CTAACCGAGCTTTGTACCGA 57.358 50.000 0.00 0.00 0.00 4.69
149 150 2.950433 CTAACCGAGCTTTGTACCGAA 58.050 47.619 0.00 0.00 0.00 4.30
150 151 1.792006 AACCGAGCTTTGTACCGAAG 58.208 50.000 0.00 0.00 0.00 3.79
166 167 1.585297 GAAGGTTTCGGTTTCGGTCA 58.415 50.000 0.00 0.00 36.95 4.02
167 168 1.262417 GAAGGTTTCGGTTTCGGTCAC 59.738 52.381 0.00 0.00 36.95 3.67
168 169 0.466963 AGGTTTCGGTTTCGGTCACT 59.533 50.000 0.00 0.00 36.95 3.41
169 170 1.134310 AGGTTTCGGTTTCGGTCACTT 60.134 47.619 0.00 0.00 36.95 3.16
170 171 1.262417 GGTTTCGGTTTCGGTCACTTC 59.738 52.381 0.00 0.00 36.95 3.01
171 172 1.071041 GTTTCGGTTTCGGTCACTTCG 60.071 52.381 0.00 0.00 36.95 3.79
172 173 0.598158 TTCGGTTTCGGTCACTTCGG 60.598 55.000 0.00 0.00 36.95 4.30
173 174 2.664436 CGGTTTCGGTCACTTCGGC 61.664 63.158 0.00 0.00 0.00 5.54
174 175 1.301479 GGTTTCGGTCACTTCGGCT 60.301 57.895 0.00 0.00 0.00 5.52
175 176 0.883370 GGTTTCGGTCACTTCGGCTT 60.883 55.000 0.00 0.00 0.00 4.35
176 177 0.511653 GTTTCGGTCACTTCGGCTTC 59.488 55.000 0.00 0.00 0.00 3.86
177 178 0.942410 TTTCGGTCACTTCGGCTTCG 60.942 55.000 0.00 0.00 0.00 3.79
178 179 2.758770 TTCGGTCACTTCGGCTTCGG 62.759 60.000 0.00 0.00 34.13 4.30
179 180 2.342648 GGTCACTTCGGCTTCGGT 59.657 61.111 0.00 0.00 34.13 4.69
180 181 1.737008 GGTCACTTCGGCTTCGGTC 60.737 63.158 0.00 0.00 34.13 4.79
181 182 1.737008 GTCACTTCGGCTTCGGTCC 60.737 63.158 0.00 0.00 34.13 4.46
182 183 2.204461 TCACTTCGGCTTCGGTCCA 61.204 57.895 0.00 0.00 34.13 4.02
183 184 1.738099 CACTTCGGCTTCGGTCCAG 60.738 63.158 0.00 0.00 34.13 3.86
184 185 2.815647 CTTCGGCTTCGGTCCAGC 60.816 66.667 0.00 0.00 36.45 4.85
185 186 3.302347 CTTCGGCTTCGGTCCAGCT 62.302 63.158 1.50 0.00 37.43 4.24
186 187 2.788191 CTTCGGCTTCGGTCCAGCTT 62.788 60.000 1.50 0.00 37.43 3.74
187 188 1.537814 TTCGGCTTCGGTCCAGCTTA 61.538 55.000 1.50 0.00 37.43 3.09
188 189 1.079405 CGGCTTCGGTCCAGCTTAA 60.079 57.895 1.50 0.00 37.43 1.85
189 190 0.672401 CGGCTTCGGTCCAGCTTAAA 60.672 55.000 1.50 0.00 37.43 1.52
190 191 1.751437 GGCTTCGGTCCAGCTTAAAT 58.249 50.000 1.50 0.00 37.43 1.40
191 192 1.671328 GGCTTCGGTCCAGCTTAAATC 59.329 52.381 1.50 0.00 37.43 2.17
192 193 1.327764 GCTTCGGTCCAGCTTAAATCG 59.672 52.381 0.00 0.00 34.15 3.34
193 194 1.933853 CTTCGGTCCAGCTTAAATCGG 59.066 52.381 0.00 0.00 0.00 4.18
194 195 0.899720 TCGGTCCAGCTTAAATCGGT 59.100 50.000 0.00 0.00 0.00 4.69
195 196 1.276989 TCGGTCCAGCTTAAATCGGTT 59.723 47.619 0.00 0.00 0.00 4.44
196 197 1.664151 CGGTCCAGCTTAAATCGGTTC 59.336 52.381 0.00 0.00 0.00 3.62
197 198 1.664151 GGTCCAGCTTAAATCGGTTCG 59.336 52.381 0.00 0.00 0.00 3.95
198 199 2.613691 GTCCAGCTTAAATCGGTTCGA 58.386 47.619 0.00 0.00 41.13 3.71
200 201 4.365723 GTCCAGCTTAAATCGGTTCGATA 58.634 43.478 3.16 0.00 46.30 2.92
201 202 4.807304 GTCCAGCTTAAATCGGTTCGATAA 59.193 41.667 3.16 0.00 46.30 1.75
202 203 5.292589 GTCCAGCTTAAATCGGTTCGATAAA 59.707 40.000 3.16 1.58 46.30 1.40
203 204 6.018180 GTCCAGCTTAAATCGGTTCGATAAAT 60.018 38.462 3.16 0.00 46.30 1.40
204 205 6.202188 TCCAGCTTAAATCGGTTCGATAAATC 59.798 38.462 3.16 0.00 46.30 2.17
205 206 6.065153 CAGCTTAAATCGGTTCGATAAATCG 58.935 40.000 6.01 6.01 46.30 3.34
206 207 5.176958 AGCTTAAATCGGTTCGATAAATCGG 59.823 40.000 12.09 0.00 46.30 4.18
207 208 5.050567 GCTTAAATCGGTTCGATAAATCGGT 60.051 40.000 12.09 0.00 46.30 4.69
208 209 6.510638 GCTTAAATCGGTTCGATAAATCGGTT 60.511 38.462 12.09 0.00 46.58 4.44
209 210 5.806366 AAATCGGTTCGATAAATCGGTTT 57.194 34.783 12.09 0.00 43.90 3.27
210 211 5.806366 AATCGGTTCGATAAATCGGTTTT 57.194 34.783 12.09 0.00 42.04 2.43
211 212 5.803118 AATCGGTTCGATAAATCGGTTTTC 58.197 37.500 12.09 0.00 42.04 2.29
212 213 5.501252 AATCGGTTCGATAAATCGGTTTTCG 60.501 40.000 12.09 15.16 42.04 3.46
213 214 8.355974 AATCGGTTCGATAAATCGGTTTTCGG 62.356 42.308 18.73 8.51 42.04 4.30
218 219 5.662211 CGATAAATCGGTTTTCGGGTTAT 57.338 39.130 0.00 0.00 45.93 1.89
219 220 6.768029 CGATAAATCGGTTTTCGGGTTATA 57.232 37.500 0.00 0.00 45.93 0.98
220 221 7.355332 CGATAAATCGGTTTTCGGGTTATAT 57.645 36.000 0.00 0.00 45.93 0.86
221 222 7.231607 CGATAAATCGGTTTTCGGGTTATATG 58.768 38.462 0.00 0.00 45.93 1.78
222 223 7.095523 CGATAAATCGGTTTTCGGGTTATATGT 60.096 37.037 0.00 0.00 45.93 2.29
223 224 6.762702 AAATCGGTTTTCGGGTTATATGTT 57.237 33.333 0.00 0.00 39.77 2.71
224 225 5.996669 ATCGGTTTTCGGGTTATATGTTC 57.003 39.130 0.00 0.00 39.77 3.18
225 226 4.829968 TCGGTTTTCGGGTTATATGTTCA 58.170 39.130 0.00 0.00 39.77 3.18
226 227 4.630940 TCGGTTTTCGGGTTATATGTTCAC 59.369 41.667 0.00 0.00 39.77 3.18
227 228 4.201841 CGGTTTTCGGGTTATATGTTCACC 60.202 45.833 0.00 0.00 34.75 4.02
228 229 4.096833 GGTTTTCGGGTTATATGTTCACCC 59.903 45.833 0.01 0.01 46.17 4.61
229 230 3.564053 TTCGGGTTATATGTTCACCCC 57.436 47.619 4.31 0.00 46.86 4.95
230 231 2.766736 TCGGGTTATATGTTCACCCCT 58.233 47.619 4.31 0.00 46.86 4.79
231 232 3.926198 TCGGGTTATATGTTCACCCCTA 58.074 45.455 4.31 0.00 46.86 3.53
232 233 4.495565 TCGGGTTATATGTTCACCCCTAT 58.504 43.478 4.31 0.00 46.86 2.57
233 234 4.529377 TCGGGTTATATGTTCACCCCTATC 59.471 45.833 4.31 0.00 46.86 2.08
234 235 4.285003 CGGGTTATATGTTCACCCCTATCA 59.715 45.833 4.31 0.00 46.86 2.15
235 236 5.557866 GGGTTATATGTTCACCCCTATCAC 58.442 45.833 0.00 0.00 44.16 3.06
236 237 5.514310 GGGTTATATGTTCACCCCTATCACC 60.514 48.000 0.00 0.00 44.16 4.02
237 238 5.309806 GGTTATATGTTCACCCCTATCACCT 59.690 44.000 0.00 0.00 0.00 4.00
238 239 4.982241 ATATGTTCACCCCTATCACCTG 57.018 45.455 0.00 0.00 0.00 4.00
239 240 0.618458 TGTTCACCCCTATCACCTGC 59.382 55.000 0.00 0.00 0.00 4.85
240 241 0.618458 GTTCACCCCTATCACCTGCA 59.382 55.000 0.00 0.00 0.00 4.41
241 242 1.212935 GTTCACCCCTATCACCTGCAT 59.787 52.381 0.00 0.00 0.00 3.96
242 243 0.839277 TCACCCCTATCACCTGCATG 59.161 55.000 0.00 0.00 0.00 4.06
243 244 0.839277 CACCCCTATCACCTGCATGA 59.161 55.000 0.00 0.00 0.00 3.07
244 245 1.422781 CACCCCTATCACCTGCATGAT 59.577 52.381 7.87 7.87 42.13 2.45
245 246 1.422781 ACCCCTATCACCTGCATGATG 59.577 52.381 12.16 0.00 39.68 3.07
246 247 1.422781 CCCCTATCACCTGCATGATGT 59.577 52.381 12.16 0.00 39.68 3.06
247 248 2.158564 CCCCTATCACCTGCATGATGTT 60.159 50.000 12.16 0.00 39.68 2.71
248 249 2.882761 CCCTATCACCTGCATGATGTTG 59.117 50.000 12.16 3.82 39.68 3.33
249 250 3.434024 CCCTATCACCTGCATGATGTTGA 60.434 47.826 12.16 0.00 39.68 3.18
250 251 4.395625 CCTATCACCTGCATGATGTTGAT 58.604 43.478 12.16 5.75 39.68 2.57
251 252 4.825634 CCTATCACCTGCATGATGTTGATT 59.174 41.667 12.16 0.00 39.68 2.57
252 253 4.649088 ATCACCTGCATGATGTTGATTG 57.351 40.909 1.96 0.00 37.93 2.67
253 254 2.756207 TCACCTGCATGATGTTGATTGG 59.244 45.455 0.00 0.00 0.00 3.16
254 255 2.494471 CACCTGCATGATGTTGATTGGT 59.506 45.455 0.00 0.00 0.00 3.67
255 256 2.494471 ACCTGCATGATGTTGATTGGTG 59.506 45.455 0.00 0.00 0.00 4.17
256 257 2.494471 CCTGCATGATGTTGATTGGTGT 59.506 45.455 0.00 0.00 0.00 4.16
257 258 3.507786 CTGCATGATGTTGATTGGTGTG 58.492 45.455 0.00 0.00 0.00 3.82
258 259 2.231721 TGCATGATGTTGATTGGTGTGG 59.768 45.455 0.00 0.00 0.00 4.17
259 260 2.492881 GCATGATGTTGATTGGTGTGGA 59.507 45.455 0.00 0.00 0.00 4.02
260 261 3.056678 GCATGATGTTGATTGGTGTGGAA 60.057 43.478 0.00 0.00 0.00 3.53
261 262 4.561123 GCATGATGTTGATTGGTGTGGAAA 60.561 41.667 0.00 0.00 0.00 3.13
262 263 4.852134 TGATGTTGATTGGTGTGGAAAG 57.148 40.909 0.00 0.00 0.00 2.62
263 264 3.573538 TGATGTTGATTGGTGTGGAAAGG 59.426 43.478 0.00 0.00 0.00 3.11
264 265 3.025322 TGTTGATTGGTGTGGAAAGGT 57.975 42.857 0.00 0.00 0.00 3.50
265 266 2.692557 TGTTGATTGGTGTGGAAAGGTG 59.307 45.455 0.00 0.00 0.00 4.00
266 267 2.693074 GTTGATTGGTGTGGAAAGGTGT 59.307 45.455 0.00 0.00 0.00 4.16
267 268 2.305928 TGATTGGTGTGGAAAGGTGTG 58.694 47.619 0.00 0.00 0.00 3.82
268 269 2.306847 GATTGGTGTGGAAAGGTGTGT 58.693 47.619 0.00 0.00 0.00 3.72
269 270 1.757682 TTGGTGTGGAAAGGTGTGTC 58.242 50.000 0.00 0.00 0.00 3.67
270 271 0.621082 TGGTGTGGAAAGGTGTGTCA 59.379 50.000 0.00 0.00 0.00 3.58
271 272 1.308998 GGTGTGGAAAGGTGTGTCAG 58.691 55.000 0.00 0.00 0.00 3.51
272 273 1.134220 GGTGTGGAAAGGTGTGTCAGA 60.134 52.381 0.00 0.00 0.00 3.27
273 274 2.487265 GGTGTGGAAAGGTGTGTCAGAT 60.487 50.000 0.00 0.00 0.00 2.90
274 275 2.549754 GTGTGGAAAGGTGTGTCAGATG 59.450 50.000 0.00 0.00 0.00 2.90
275 276 2.437651 TGTGGAAAGGTGTGTCAGATGA 59.562 45.455 0.00 0.00 0.00 2.92
276 277 2.808543 GTGGAAAGGTGTGTCAGATGAC 59.191 50.000 6.01 6.01 44.97 3.06
277 278 2.705658 TGGAAAGGTGTGTCAGATGACT 59.294 45.455 13.74 0.00 44.99 3.41
278 279 3.136443 TGGAAAGGTGTGTCAGATGACTT 59.864 43.478 13.74 0.00 44.99 3.01
279 280 4.346709 TGGAAAGGTGTGTCAGATGACTTA 59.653 41.667 13.74 0.82 44.99 2.24
280 281 5.013079 TGGAAAGGTGTGTCAGATGACTTAT 59.987 40.000 13.74 0.00 44.99 1.73
281 282 6.212589 TGGAAAGGTGTGTCAGATGACTTATA 59.787 38.462 13.74 0.00 44.99 0.98
282 283 7.103641 GGAAAGGTGTGTCAGATGACTTATAA 58.896 38.462 13.74 0.00 44.99 0.98
283 284 7.606456 GGAAAGGTGTGTCAGATGACTTATAAA 59.394 37.037 13.74 0.00 44.99 1.40
284 285 9.167311 GAAAGGTGTGTCAGATGACTTATAAAT 57.833 33.333 13.74 0.00 44.99 1.40
285 286 8.723942 AAGGTGTGTCAGATGACTTATAAATC 57.276 34.615 13.74 0.00 44.99 2.17
286 287 7.851228 AGGTGTGTCAGATGACTTATAAATCA 58.149 34.615 13.74 0.00 44.99 2.57
287 288 7.984050 AGGTGTGTCAGATGACTTATAAATCAG 59.016 37.037 13.74 0.00 44.99 2.90
288 289 7.225538 GGTGTGTCAGATGACTTATAAATCAGG 59.774 40.741 13.74 0.00 44.99 3.86
289 290 7.766278 GTGTGTCAGATGACTTATAAATCAGGT 59.234 37.037 13.74 0.00 44.99 4.00
290 291 7.765819 TGTGTCAGATGACTTATAAATCAGGTG 59.234 37.037 13.74 2.98 44.99 4.00
291 292 7.981789 GTGTCAGATGACTTATAAATCAGGTGA 59.018 37.037 13.74 5.12 44.99 4.02
292 293 7.981789 TGTCAGATGACTTATAAATCAGGTGAC 59.018 37.037 22.48 22.48 44.99 3.67
293 294 7.981789 GTCAGATGACTTATAAATCAGGTGACA 59.018 37.037 23.44 5.41 39.29 3.58
294 295 8.539544 TCAGATGACTTATAAATCAGGTGACAA 58.460 33.333 2.76 0.00 0.00 3.18
295 296 8.607459 CAGATGACTTATAAATCAGGTGACAAC 58.393 37.037 2.76 0.00 0.00 3.32
305 306 3.250220 GGTGACAACCAAACAAGCG 57.750 52.632 0.00 0.00 46.75 4.68
306 307 0.454196 GGTGACAACCAAACAAGCGT 59.546 50.000 0.00 0.00 46.75 5.07
307 308 1.544686 GTGACAACCAAACAAGCGTG 58.455 50.000 0.00 0.00 0.00 5.34
308 309 1.131504 GTGACAACCAAACAAGCGTGA 59.868 47.619 6.65 0.00 0.00 4.35
309 310 1.131504 TGACAACCAAACAAGCGTGAC 59.868 47.619 6.65 0.00 0.00 3.67
310 311 1.400494 GACAACCAAACAAGCGTGACT 59.600 47.619 6.65 0.00 0.00 3.41
311 312 1.816224 ACAACCAAACAAGCGTGACTT 59.184 42.857 6.65 0.00 40.05 3.01
312 313 3.011119 ACAACCAAACAAGCGTGACTTA 58.989 40.909 6.65 0.00 36.04 2.24
313 314 3.630312 ACAACCAAACAAGCGTGACTTAT 59.370 39.130 6.65 0.00 36.04 1.73
314 315 4.817464 ACAACCAAACAAGCGTGACTTATA 59.183 37.500 6.65 0.00 36.04 0.98
315 316 5.297278 ACAACCAAACAAGCGTGACTTATAA 59.703 36.000 6.65 0.00 36.04 0.98
316 317 6.183360 ACAACCAAACAAGCGTGACTTATAAA 60.183 34.615 6.65 0.00 36.04 1.40
317 318 6.569179 ACCAAACAAGCGTGACTTATAAAT 57.431 33.333 6.65 0.00 36.04 1.40
318 319 6.608610 ACCAAACAAGCGTGACTTATAAATC 58.391 36.000 6.65 0.00 36.04 2.17
319 320 6.205853 ACCAAACAAGCGTGACTTATAAATCA 59.794 34.615 6.65 0.00 36.04 2.57
320 321 6.523201 CCAAACAAGCGTGACTTATAAATCAC 59.477 38.462 15.43 15.43 41.54 3.06
321 322 7.298122 CAAACAAGCGTGACTTATAAATCACT 58.702 34.615 21.09 4.60 42.56 3.41
322 323 8.440059 CAAACAAGCGTGACTTATAAATCACTA 58.560 33.333 21.09 0.00 42.56 2.74
323 324 7.757097 ACAAGCGTGACTTATAAATCACTAG 57.243 36.000 21.09 10.43 42.56 2.57
324 325 7.321153 ACAAGCGTGACTTATAAATCACTAGT 58.679 34.615 21.09 12.60 42.56 2.57
325 326 7.817962 ACAAGCGTGACTTATAAATCACTAGTT 59.182 33.333 21.09 10.93 42.56 2.24
326 327 8.656849 CAAGCGTGACTTATAAATCACTAGTTT 58.343 33.333 21.09 10.49 42.56 2.66
327 328 8.773404 AGCGTGACTTATAAATCACTAGTTTT 57.227 30.769 21.09 0.00 42.56 2.43
328 329 9.865321 AGCGTGACTTATAAATCACTAGTTTTA 57.135 29.630 21.09 0.00 42.56 1.52
340 341 9.574516 AAATCACTAGTTTTAAATCACCTGACT 57.425 29.630 0.00 0.00 0.00 3.41
341 342 9.574516 AATCACTAGTTTTAAATCACCTGACTT 57.425 29.630 0.00 0.00 0.00 3.01
367 368 4.067972 GTCAGGTGACTTACTGAAACCA 57.932 45.455 2.72 0.00 44.53 3.67
368 369 4.448210 GTCAGGTGACTTACTGAAACCAA 58.552 43.478 2.72 0.00 44.53 3.67
369 370 4.879545 GTCAGGTGACTTACTGAAACCAAA 59.120 41.667 2.72 0.00 44.53 3.28
370 371 4.879545 TCAGGTGACTTACTGAAACCAAAC 59.120 41.667 0.00 0.00 40.51 2.93
371 372 4.638421 CAGGTGACTTACTGAAACCAAACA 59.362 41.667 0.00 0.00 40.21 2.83
372 373 4.881850 AGGTGACTTACTGAAACCAAACAG 59.118 41.667 0.00 0.00 37.44 3.16
373 374 4.036380 GGTGACTTACTGAAACCAAACAGG 59.964 45.833 0.00 0.00 45.67 4.00
374 375 4.036380 GTGACTTACTGAAACCAAACAGGG 59.964 45.833 0.00 0.00 43.89 4.45
375 376 2.956333 ACTTACTGAAACCAAACAGGGC 59.044 45.455 0.00 0.00 43.89 5.19
376 377 1.989706 TACTGAAACCAAACAGGGCC 58.010 50.000 0.00 0.00 43.89 5.80
377 378 0.261696 ACTGAAACCAAACAGGGCCT 59.738 50.000 0.00 0.00 43.89 5.19
378 379 1.497286 ACTGAAACCAAACAGGGCCTA 59.503 47.619 5.28 0.00 43.89 3.93
379 380 2.091555 ACTGAAACCAAACAGGGCCTAA 60.092 45.455 5.28 0.00 43.89 2.69
380 381 2.558359 CTGAAACCAAACAGGGCCTAAG 59.442 50.000 5.28 0.00 43.89 2.18
381 382 2.091555 TGAAACCAAACAGGGCCTAAGT 60.092 45.455 5.28 0.00 43.89 2.24
382 383 2.287977 AACCAAACAGGGCCTAAGTC 57.712 50.000 5.28 0.00 43.89 3.01
383 384 1.145571 ACCAAACAGGGCCTAAGTCA 58.854 50.000 5.28 0.00 43.89 3.41
384 385 1.710809 ACCAAACAGGGCCTAAGTCAT 59.289 47.619 5.28 0.00 43.89 3.06
385 386 2.916934 ACCAAACAGGGCCTAAGTCATA 59.083 45.455 5.28 0.00 43.89 2.15
386 387 3.332485 ACCAAACAGGGCCTAAGTCATAA 59.668 43.478 5.28 0.00 43.89 1.90
387 388 3.947834 CCAAACAGGGCCTAAGTCATAAG 59.052 47.826 5.28 0.00 0.00 1.73
388 389 4.567747 CCAAACAGGGCCTAAGTCATAAGT 60.568 45.833 5.28 0.00 0.00 2.24
389 390 4.929146 AACAGGGCCTAAGTCATAAGTT 57.071 40.909 5.28 0.00 0.00 2.66
390 391 4.222124 ACAGGGCCTAAGTCATAAGTTG 57.778 45.455 5.28 0.00 0.00 3.16
391 392 2.945668 CAGGGCCTAAGTCATAAGTTGC 59.054 50.000 5.28 0.00 0.00 4.17
392 393 2.846827 AGGGCCTAAGTCATAAGTTGCT 59.153 45.455 2.82 0.00 0.00 3.91
393 394 3.118223 AGGGCCTAAGTCATAAGTTGCTC 60.118 47.826 2.82 0.00 0.00 4.26
394 395 3.206964 GGCCTAAGTCATAAGTTGCTCC 58.793 50.000 0.00 0.00 0.00 4.70
395 396 3.370527 GGCCTAAGTCATAAGTTGCTCCA 60.371 47.826 0.00 0.00 0.00 3.86
396 397 3.623510 GCCTAAGTCATAAGTTGCTCCAC 59.376 47.826 0.00 0.00 0.00 4.02
397 398 4.192317 CCTAAGTCATAAGTTGCTCCACC 58.808 47.826 0.00 0.00 0.00 4.61
398 399 2.789409 AGTCATAAGTTGCTCCACCC 57.211 50.000 0.00 0.00 0.00 4.61
399 400 1.282157 AGTCATAAGTTGCTCCACCCC 59.718 52.381 0.00 0.00 0.00 4.95
400 401 1.004277 GTCATAAGTTGCTCCACCCCA 59.996 52.381 0.00 0.00 0.00 4.96
401 402 1.707989 TCATAAGTTGCTCCACCCCAA 59.292 47.619 0.00 0.00 0.00 4.12
402 403 1.818674 CATAAGTTGCTCCACCCCAAC 59.181 52.381 0.00 0.00 41.13 3.77
403 404 3.674278 AGTTGCTCCACCCCAACT 58.326 55.556 0.56 0.56 44.86 3.16
404 405 1.930520 AGTTGCTCCACCCCAACTT 59.069 52.632 0.56 0.00 46.86 2.66
405 406 1.145571 AGTTGCTCCACCCCAACTTA 58.854 50.000 0.56 0.00 46.86 2.24
406 407 1.497286 AGTTGCTCCACCCCAACTTAA 59.503 47.619 0.56 0.00 46.86 1.85
407 408 2.091555 AGTTGCTCCACCCCAACTTAAA 60.092 45.455 0.56 0.00 46.86 1.52
408 409 2.696187 GTTGCTCCACCCCAACTTAAAA 59.304 45.455 0.00 0.00 38.55 1.52
409 410 2.312390 TGCTCCACCCCAACTTAAAAC 58.688 47.619 0.00 0.00 0.00 2.43
410 411 2.091555 TGCTCCACCCCAACTTAAAACT 60.092 45.455 0.00 0.00 0.00 2.66
411 412 2.963101 GCTCCACCCCAACTTAAAACTT 59.037 45.455 0.00 0.00 0.00 2.66
412 413 4.146564 GCTCCACCCCAACTTAAAACTTA 58.853 43.478 0.00 0.00 0.00 2.24
413 414 4.770531 GCTCCACCCCAACTTAAAACTTAT 59.229 41.667 0.00 0.00 0.00 1.73
414 415 5.947566 GCTCCACCCCAACTTAAAACTTATA 59.052 40.000 0.00 0.00 0.00 0.98
415 416 6.434965 GCTCCACCCCAACTTAAAACTTATAA 59.565 38.462 0.00 0.00 0.00 0.98
416 417 7.362660 GCTCCACCCCAACTTAAAACTTATAAG 60.363 40.741 11.05 11.05 36.62 1.73
417 418 7.528675 TCCACCCCAACTTAAAACTTATAAGT 58.471 34.615 12.50 12.50 43.57 2.24
418 419 7.666804 TCCACCCCAACTTAAAACTTATAAGTC 59.333 37.037 18.28 0.00 41.49 3.01
419 420 7.449086 CCACCCCAACTTAAAACTTATAAGTCA 59.551 37.037 18.28 4.72 41.49 3.41
420 421 8.294577 CACCCCAACTTAAAACTTATAAGTCAC 58.705 37.037 18.28 0.00 41.49 3.67
421 422 7.449395 ACCCCAACTTAAAACTTATAAGTCACC 59.551 37.037 18.28 0.00 41.49 4.02
422 423 7.094075 CCCCAACTTAAAACTTATAAGTCACCC 60.094 40.741 18.28 0.00 41.49 4.61
423 424 7.668469 CCCAACTTAAAACTTATAAGTCACCCT 59.332 37.037 18.28 0.00 41.49 4.34
424 425 8.727910 CCAACTTAAAACTTATAAGTCACCCTC 58.272 37.037 18.28 0.00 41.49 4.30
425 426 9.503399 CAACTTAAAACTTATAAGTCACCCTCT 57.497 33.333 18.28 0.00 41.49 3.69
430 431 8.762481 AAAACTTATAAGTCACCCTCTTTTGT 57.238 30.769 18.28 0.00 38.57 2.83
431 432 7.745620 AACTTATAAGTCACCCTCTTTTGTG 57.254 36.000 18.28 0.00 38.57 3.33
432 433 6.838382 ACTTATAAGTCACCCTCTTTTGTGT 58.162 36.000 12.50 0.00 32.86 3.72
433 434 6.710744 ACTTATAAGTCACCCTCTTTTGTGTG 59.289 38.462 12.50 0.00 32.86 3.82
434 435 2.348411 AGTCACCCTCTTTTGTGTGG 57.652 50.000 0.00 0.00 34.14 4.17
435 436 1.133792 AGTCACCCTCTTTTGTGTGGG 60.134 52.381 0.00 0.00 44.89 4.61
438 439 3.036431 CCCTCTTTTGTGTGGGTCC 57.964 57.895 0.00 0.00 35.13 4.46
439 440 0.539669 CCCTCTTTTGTGTGGGTCCC 60.540 60.000 0.00 0.00 35.13 4.46
440 441 0.184933 CCTCTTTTGTGTGGGTCCCA 59.815 55.000 6.47 6.47 0.00 4.37
449 450 3.181530 TGGGTCCCACCACATGCA 61.182 61.111 6.47 0.00 41.02 3.96
450 451 2.360191 GGGTCCCACCACATGCAT 59.640 61.111 1.78 0.00 41.02 3.96
451 452 2.053865 GGGTCCCACCACATGCATG 61.054 63.158 25.09 25.09 41.02 4.06
452 453 1.001020 GGTCCCACCACATGCATGA 60.001 57.895 32.75 5.74 38.42 3.07
453 454 0.396139 GGTCCCACCACATGCATGAT 60.396 55.000 32.75 14.29 38.42 2.45
454 455 0.742505 GTCCCACCACATGCATGATG 59.257 55.000 32.75 23.69 38.15 3.07
455 456 0.332293 TCCCACCACATGCATGATGT 59.668 50.000 32.75 23.54 46.98 3.06
466 467 5.827666 ACATGCATGATGTGTATTGATGTG 58.172 37.500 32.75 1.79 44.12 3.21
467 468 4.904253 TGCATGATGTGTATTGATGTGG 57.096 40.909 0.00 0.00 0.00 4.17
468 469 3.633065 TGCATGATGTGTATTGATGTGGG 59.367 43.478 0.00 0.00 0.00 4.61
469 470 3.884693 GCATGATGTGTATTGATGTGGGA 59.115 43.478 0.00 0.00 0.00 4.37
470 471 4.338964 GCATGATGTGTATTGATGTGGGAA 59.661 41.667 0.00 0.00 0.00 3.97
471 472 5.506815 GCATGATGTGTATTGATGTGGGAAG 60.507 44.000 0.00 0.00 0.00 3.46
472 473 4.525996 TGATGTGTATTGATGTGGGAAGG 58.474 43.478 0.00 0.00 0.00 3.46
473 474 4.018506 TGATGTGTATTGATGTGGGAAGGT 60.019 41.667 0.00 0.00 0.00 3.50
474 475 3.684908 TGTGTATTGATGTGGGAAGGTG 58.315 45.455 0.00 0.00 0.00 4.00
475 476 3.073798 TGTGTATTGATGTGGGAAGGTGT 59.926 43.478 0.00 0.00 0.00 4.16
476 477 4.079253 GTGTATTGATGTGGGAAGGTGTT 58.921 43.478 0.00 0.00 0.00 3.32
477 478 4.078537 TGTATTGATGTGGGAAGGTGTTG 58.921 43.478 0.00 0.00 0.00 3.33
478 479 2.746279 TTGATGTGGGAAGGTGTTGT 57.254 45.000 0.00 0.00 0.00 3.32
479 480 2.270352 TGATGTGGGAAGGTGTTGTC 57.730 50.000 0.00 0.00 0.00 3.18
480 481 1.492599 TGATGTGGGAAGGTGTTGTCA 59.507 47.619 0.00 0.00 0.00 3.58
481 482 2.092158 TGATGTGGGAAGGTGTTGTCAA 60.092 45.455 0.00 0.00 0.00 3.18
482 483 2.051334 TGTGGGAAGGTGTTGTCAAG 57.949 50.000 0.00 0.00 0.00 3.02
483 484 1.283613 TGTGGGAAGGTGTTGTCAAGT 59.716 47.619 0.00 0.00 0.00 3.16
484 485 1.676006 GTGGGAAGGTGTTGTCAAGTG 59.324 52.381 0.00 0.00 0.00 3.16
485 486 1.562008 TGGGAAGGTGTTGTCAAGTGA 59.438 47.619 0.00 0.00 0.00 3.41
486 487 1.947456 GGGAAGGTGTTGTCAAGTGAC 59.053 52.381 4.43 4.43 44.97 3.67
487 488 2.421529 GGGAAGGTGTTGTCAAGTGACT 60.422 50.000 12.43 0.00 44.99 3.41
488 489 3.279434 GGAAGGTGTTGTCAAGTGACTT 58.721 45.455 12.43 0.00 44.99 3.01
489 490 4.448210 GGAAGGTGTTGTCAAGTGACTTA 58.552 43.478 12.43 0.00 44.99 2.24
490 491 4.879545 GGAAGGTGTTGTCAAGTGACTTAA 59.120 41.667 12.43 0.00 44.99 1.85
491 492 5.355910 GGAAGGTGTTGTCAAGTGACTTAAA 59.644 40.000 12.43 0.00 44.99 1.52
492 493 6.127842 GGAAGGTGTTGTCAAGTGACTTAAAA 60.128 38.462 12.43 0.00 44.99 1.52
493 494 6.827586 AGGTGTTGTCAAGTGACTTAAAAA 57.172 33.333 12.43 0.00 44.99 1.94
494 495 7.404671 AGGTGTTGTCAAGTGACTTAAAAAT 57.595 32.000 12.43 0.00 44.99 1.82
495 496 8.514330 AGGTGTTGTCAAGTGACTTAAAAATA 57.486 30.769 12.43 0.00 44.99 1.40
496 497 8.621286 AGGTGTTGTCAAGTGACTTAAAAATAG 58.379 33.333 12.43 0.00 44.99 1.73
497 498 8.617809 GGTGTTGTCAAGTGACTTAAAAATAGA 58.382 33.333 12.43 0.00 44.99 1.98
516 517 9.537192 AAAATAGATGATAACCAAACATGCATG 57.463 29.630 25.09 25.09 0.00 4.06
517 518 8.467963 AATAGATGATAACCAAACATGCATGA 57.532 30.769 32.75 9.14 0.00 3.07
518 519 6.140303 AGATGATAACCAAACATGCATGAC 57.860 37.500 32.75 11.66 0.00 3.06
519 520 5.889853 AGATGATAACCAAACATGCATGACT 59.110 36.000 32.75 16.19 0.00 3.41
520 521 5.981088 TGATAACCAAACATGCATGACTT 57.019 34.783 32.75 20.81 0.00 3.01
521 522 7.557358 AGATGATAACCAAACATGCATGACTTA 59.443 33.333 32.75 17.72 0.00 2.24
522 523 7.643569 TGATAACCAAACATGCATGACTTAT 57.356 32.000 32.75 20.84 0.00 1.73
523 524 8.744568 TGATAACCAAACATGCATGACTTATA 57.255 30.769 32.75 16.95 0.00 0.98
524 525 9.183368 TGATAACCAAACATGCATGACTTATAA 57.817 29.630 32.75 14.07 0.00 0.98
525 526 9.669353 GATAACCAAACATGCATGACTTATAAG 57.331 33.333 32.75 11.05 0.00 1.73
526 527 7.466746 AACCAAACATGCATGACTTATAAGT 57.533 32.000 32.75 18.05 43.16 2.24
545 546 9.802039 TTATAAGTCACTGGTTTTAAATCACCT 57.198 29.630 9.85 0.00 33.76 4.00
546 547 6.391227 AAGTCACTGGTTTTAAATCACCTG 57.609 37.500 12.12 12.12 37.86 4.00
547 548 5.690865 AGTCACTGGTTTTAAATCACCTGA 58.309 37.500 17.91 8.98 35.95 3.86
548 549 5.531287 AGTCACTGGTTTTAAATCACCTGAC 59.469 40.000 17.91 17.14 38.02 3.51
549 550 5.531287 GTCACTGGTTTTAAATCACCTGACT 59.469 40.000 17.91 0.27 36.22 3.41
550 551 6.039382 GTCACTGGTTTTAAATCACCTGACTT 59.961 38.462 17.91 0.00 36.22 3.01
551 552 7.227910 GTCACTGGTTTTAAATCACCTGACTTA 59.772 37.037 17.91 3.30 36.22 2.24
552 553 7.942341 TCACTGGTTTTAAATCACCTGACTTAT 59.058 33.333 17.91 0.00 35.95 1.73
553 554 9.226606 CACTGGTTTTAAATCACCTGACTTATA 57.773 33.333 17.91 0.00 35.95 0.98
554 555 9.802039 ACTGGTTTTAAATCACCTGACTTATAA 57.198 29.630 17.91 0.00 35.95 0.98
556 557 9.802039 TGGTTTTAAATCACCTGACTTATAAGT 57.198 29.630 18.05 18.05 36.57 2.24
560 561 9.802039 TTTAAATCACCTGACTTATAAGTTGGT 57.198 29.630 25.73 25.73 42.63 3.67
576 577 5.836024 AGTTGGTGACTTATTTAGACCCA 57.164 39.130 0.00 0.00 33.92 4.51
577 578 6.195600 AGTTGGTGACTTATTTAGACCCAA 57.804 37.500 0.00 0.00 33.92 4.12
578 579 6.607019 AGTTGGTGACTTATTTAGACCCAAA 58.393 36.000 0.00 0.00 33.92 3.28
579 580 6.489022 AGTTGGTGACTTATTTAGACCCAAAC 59.511 38.462 0.00 0.00 33.92 2.93
580 581 5.942961 TGGTGACTTATTTAGACCCAAACA 58.057 37.500 0.00 0.00 0.00 2.83
581 582 6.001460 TGGTGACTTATTTAGACCCAAACAG 58.999 40.000 0.00 0.00 0.00 3.16
582 583 5.414765 GGTGACTTATTTAGACCCAAACAGG 59.585 44.000 0.00 0.00 37.03 4.00
583 584 5.007682 TGACTTATTTAGACCCAAACAGGC 58.992 41.667 0.00 0.00 35.39 4.85
584 585 4.341487 ACTTATTTAGACCCAAACAGGCC 58.659 43.478 0.00 0.00 35.39 5.19
585 586 2.231716 ATTTAGACCCAAACAGGCCC 57.768 50.000 0.00 0.00 35.39 5.80
621 622 2.501261 GAACTCCCGCTTAAACCTTGT 58.499 47.619 0.00 0.00 0.00 3.16
719 723 5.987953 AGTATATCAACACAGCACTGCTATG 59.012 40.000 7.80 7.80 39.20 2.23
749 753 4.034742 GTCAAAGAGAAAAACACTGCCGTA 59.965 41.667 0.00 0.00 0.00 4.02
769 773 1.075374 AGGCTGTTTGGGCTATGTGAA 59.925 47.619 0.00 0.00 40.37 3.18
779 783 0.465460 GCTATGTGAATCGGGCCCAA 60.465 55.000 24.92 2.23 0.00 4.12
857 866 2.227626 TCTTTCTCTCTGTCTGTCGCAG 59.772 50.000 1.02 1.02 35.43 5.18
863 872 2.623416 TCTCTGTCTGTCGCAGAAAAGA 59.377 45.455 10.46 13.74 42.46 2.52
875 884 3.430218 CGCAGAAAAGAACAGACAGTAGG 59.570 47.826 0.00 0.00 0.00 3.18
900 909 3.414549 AAAACATTTGTGTTCGCGACT 57.585 38.095 9.15 0.00 0.00 4.18
901 910 2.663279 AACATTTGTGTTCGCGACTC 57.337 45.000 9.15 5.84 0.00 3.36
902 911 0.506932 ACATTTGTGTTCGCGACTCG 59.493 50.000 9.15 0.00 40.15 4.18
938 951 0.466124 CCTCGATCCCCTTCTTGACC 59.534 60.000 0.00 0.00 0.00 4.02
976 994 4.631740 TCCCTCTCCCCGTGCACA 62.632 66.667 18.64 0.00 0.00 4.57
1043 1061 2.358737 CCACCTCCAGAACACGCC 60.359 66.667 0.00 0.00 0.00 5.68
1256 1304 4.016706 CCGAGGGGGCGAAGTGTT 62.017 66.667 0.00 0.00 0.00 3.32
1257 1305 2.742372 CGAGGGGGCGAAGTGTTG 60.742 66.667 0.00 0.00 0.00 3.33
1258 1306 2.359975 GAGGGGGCGAAGTGTTGG 60.360 66.667 0.00 0.00 0.00 3.77
1259 1307 4.660938 AGGGGGCGAAGTGTTGGC 62.661 66.667 0.00 0.00 0.00 4.52
1260 1308 4.966787 GGGGGCGAAGTGTTGGCA 62.967 66.667 0.00 0.00 35.96 4.92
1261 1309 2.676471 GGGGCGAAGTGTTGGCAT 60.676 61.111 0.00 0.00 35.96 4.40
1282 1330 0.978907 GGGGGAAACTCAAGGTACGA 59.021 55.000 0.00 0.00 0.00 3.43
1351 1400 0.522626 CAATGTGCTGTGCGGATTCA 59.477 50.000 0.00 0.00 0.00 2.57
1525 1708 4.045783 GTGGTTTTACGGTTGAAATGTGG 58.954 43.478 0.00 0.00 0.00 4.17
1584 1777 1.146774 TGGGAGATTGTTTGGGCAAGA 59.853 47.619 0.00 0.00 0.00 3.02
2877 3137 1.759994 CGAGATAGGTCGTGATGTGC 58.240 55.000 0.00 0.00 35.14 4.57
2878 3138 1.335182 CGAGATAGGTCGTGATGTGCT 59.665 52.381 0.00 0.00 35.14 4.40
3011 3305 1.684386 TTGTGTTTTGCCTGCCTGGG 61.684 55.000 0.00 0.00 36.00 4.45
3087 3383 1.212935 CCCTCGTCTCATTTTGGGGAT 59.787 52.381 0.00 0.00 34.71 3.85
3091 3387 4.040952 CCTCGTCTCATTTTGGGGATATCT 59.959 45.833 2.05 0.00 0.00 1.98
3093 3389 5.368145 TCGTCTCATTTTGGGGATATCTTG 58.632 41.667 2.05 0.00 0.00 3.02
3095 3391 5.449553 GTCTCATTTTGGGGATATCTTGGT 58.550 41.667 2.05 0.00 0.00 3.67
3096 3392 6.601332 GTCTCATTTTGGGGATATCTTGGTA 58.399 40.000 2.05 0.00 0.00 3.25
3412 3712 4.807039 CGGTCGCCCAACTACCCG 62.807 72.222 0.00 0.00 30.14 5.28
3413 3713 3.698820 GGTCGCCCAACTACCCGT 61.699 66.667 0.00 0.00 0.00 5.28
3521 3823 1.084370 CGTCTTCATCCACTTCCCGC 61.084 60.000 0.00 0.00 0.00 6.13
3522 3824 0.036388 GTCTTCATCCACTTCCCGCA 60.036 55.000 0.00 0.00 0.00 5.69
3577 3880 1.435346 AAGCAAACCCTAGCCACCCT 61.435 55.000 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.328093 TATCTTGCCAGCTGCCGCA 62.328 57.895 12.91 12.91 40.16 5.69
18 19 2.514592 TATCTTGCCAGCTGCCGC 60.515 61.111 8.66 8.22 40.16 6.53
19 20 1.890979 CCTATCTTGCCAGCTGCCG 60.891 63.158 8.66 0.00 40.16 5.69
20 21 0.107017 TTCCTATCTTGCCAGCTGCC 60.107 55.000 8.66 0.00 40.16 4.85
21 22 1.978454 ATTCCTATCTTGCCAGCTGC 58.022 50.000 8.66 4.57 41.77 5.25
22 23 4.070716 CCTAATTCCTATCTTGCCAGCTG 58.929 47.826 6.78 6.78 0.00 4.24
23 24 3.718956 ACCTAATTCCTATCTTGCCAGCT 59.281 43.478 0.00 0.00 0.00 4.24
24 25 3.817647 CACCTAATTCCTATCTTGCCAGC 59.182 47.826 0.00 0.00 0.00 4.85
25 26 5.041191 ACACCTAATTCCTATCTTGCCAG 57.959 43.478 0.00 0.00 0.00 4.85
26 27 4.473196 TGACACCTAATTCCTATCTTGCCA 59.527 41.667 0.00 0.00 0.00 4.92
27 28 5.036117 TGACACCTAATTCCTATCTTGCC 57.964 43.478 0.00 0.00 0.00 4.52
28 29 5.059833 CCTGACACCTAATTCCTATCTTGC 58.940 45.833 0.00 0.00 0.00 4.01
29 30 5.059833 GCCTGACACCTAATTCCTATCTTG 58.940 45.833 0.00 0.00 0.00 3.02
30 31 4.103311 GGCCTGACACCTAATTCCTATCTT 59.897 45.833 0.00 0.00 0.00 2.40
31 32 3.648545 GGCCTGACACCTAATTCCTATCT 59.351 47.826 0.00 0.00 0.00 1.98
32 33 3.648545 AGGCCTGACACCTAATTCCTATC 59.351 47.826 3.11 0.00 35.10 2.08
33 34 3.648545 GAGGCCTGACACCTAATTCCTAT 59.351 47.826 12.00 0.00 37.77 2.57
34 35 3.039011 GAGGCCTGACACCTAATTCCTA 58.961 50.000 12.00 0.00 37.77 2.94
35 36 1.840635 GAGGCCTGACACCTAATTCCT 59.159 52.381 12.00 0.00 37.77 3.36
36 37 1.473434 CGAGGCCTGACACCTAATTCC 60.473 57.143 12.00 0.00 37.77 3.01
37 38 1.473434 CCGAGGCCTGACACCTAATTC 60.473 57.143 12.00 0.00 37.77 2.17
38 39 0.541863 CCGAGGCCTGACACCTAATT 59.458 55.000 12.00 0.00 37.77 1.40
39 40 0.617820 ACCGAGGCCTGACACCTAAT 60.618 55.000 12.00 0.00 37.77 1.73
40 41 1.229082 ACCGAGGCCTGACACCTAA 60.229 57.895 12.00 0.00 37.77 2.69
41 42 1.982395 CACCGAGGCCTGACACCTA 60.982 63.158 12.00 0.00 37.77 3.08
42 43 3.314331 CACCGAGGCCTGACACCT 61.314 66.667 12.00 0.00 41.41 4.00
43 44 2.676163 AAACACCGAGGCCTGACACC 62.676 60.000 12.00 0.00 0.00 4.16
44 45 1.227853 AAACACCGAGGCCTGACAC 60.228 57.895 12.00 0.00 0.00 3.67
45 46 1.070786 GAAACACCGAGGCCTGACA 59.929 57.895 12.00 0.00 0.00 3.58
46 47 2.027625 CGAAACACCGAGGCCTGAC 61.028 63.158 12.00 0.00 0.00 3.51
47 48 2.342279 CGAAACACCGAGGCCTGA 59.658 61.111 12.00 0.00 0.00 3.86
48 49 2.742372 CCGAAACACCGAGGCCTG 60.742 66.667 12.00 0.00 0.00 4.85
49 50 3.236003 GACCGAAACACCGAGGCCT 62.236 63.158 3.86 3.86 0.00 5.19
50 51 2.741211 GACCGAAACACCGAGGCC 60.741 66.667 0.00 0.00 0.00 5.19
51 52 2.027625 CTGACCGAAACACCGAGGC 61.028 63.158 0.00 0.00 0.00 4.70
52 53 0.249741 AACTGACCGAAACACCGAGG 60.250 55.000 0.00 0.00 0.00 4.63
53 54 1.137513 GAACTGACCGAAACACCGAG 58.862 55.000 0.00 0.00 0.00 4.63
54 55 0.595567 CGAACTGACCGAAACACCGA 60.596 55.000 0.00 0.00 0.00 4.69
55 56 1.554042 CCGAACTGACCGAAACACCG 61.554 60.000 0.00 0.00 0.00 4.94
56 57 0.531311 ACCGAACTGACCGAAACACC 60.531 55.000 0.00 0.00 0.00 4.16
57 58 0.580104 CACCGAACTGACCGAAACAC 59.420 55.000 0.00 0.00 0.00 3.32
58 59 0.531090 CCACCGAACTGACCGAAACA 60.531 55.000 0.00 0.00 0.00 2.83
59 60 0.249573 TCCACCGAACTGACCGAAAC 60.250 55.000 0.00 0.00 0.00 2.78
60 61 0.682852 ATCCACCGAACTGACCGAAA 59.317 50.000 0.00 0.00 0.00 3.46
61 62 0.245539 GATCCACCGAACTGACCGAA 59.754 55.000 0.00 0.00 0.00 4.30
62 63 1.888018 GATCCACCGAACTGACCGA 59.112 57.895 0.00 0.00 0.00 4.69
63 64 1.516386 CGATCCACCGAACTGACCG 60.516 63.158 0.00 0.00 0.00 4.79
64 65 0.179134 CTCGATCCACCGAACTGACC 60.179 60.000 0.00 0.00 38.17 4.02
65 66 0.179134 CCTCGATCCACCGAACTGAC 60.179 60.000 0.00 0.00 38.17 3.51
66 67 1.320344 CCCTCGATCCACCGAACTGA 61.320 60.000 0.00 0.00 38.17 3.41
67 68 1.141881 CCCTCGATCCACCGAACTG 59.858 63.158 0.00 0.00 38.17 3.16
68 69 0.033796 TACCCTCGATCCACCGAACT 60.034 55.000 0.00 0.00 38.17 3.01
69 70 0.101939 GTACCCTCGATCCACCGAAC 59.898 60.000 0.00 0.00 38.17 3.95
70 71 0.323633 TGTACCCTCGATCCACCGAA 60.324 55.000 0.00 0.00 38.17 4.30
71 72 0.750546 CTGTACCCTCGATCCACCGA 60.751 60.000 0.00 0.00 37.03 4.69
72 73 0.750546 TCTGTACCCTCGATCCACCG 60.751 60.000 0.00 0.00 0.00 4.94
73 74 0.745468 GTCTGTACCCTCGATCCACC 59.255 60.000 0.00 0.00 0.00 4.61
74 75 0.745468 GGTCTGTACCCTCGATCCAC 59.255 60.000 0.00 0.00 40.21 4.02
75 76 0.750546 CGGTCTGTACCCTCGATCCA 60.751 60.000 0.00 0.00 43.54 3.41
76 77 0.465097 TCGGTCTGTACCCTCGATCC 60.465 60.000 0.00 0.00 43.54 3.36
77 78 1.386533 TTCGGTCTGTACCCTCGATC 58.613 55.000 0.00 0.00 43.54 3.69
78 79 2.068834 ATTCGGTCTGTACCCTCGAT 57.931 50.000 0.00 0.00 43.54 3.59
79 80 1.747355 GAATTCGGTCTGTACCCTCGA 59.253 52.381 0.00 0.00 43.54 4.04
80 81 1.475280 TGAATTCGGTCTGTACCCTCG 59.525 52.381 0.04 0.00 43.54 4.63
81 82 2.418334 GGTGAATTCGGTCTGTACCCTC 60.418 54.545 0.04 0.00 43.54 4.30
82 83 1.553704 GGTGAATTCGGTCTGTACCCT 59.446 52.381 0.04 0.00 43.54 4.34
83 84 1.738030 CGGTGAATTCGGTCTGTACCC 60.738 57.143 0.04 0.00 43.54 3.69
84 85 1.203052 TCGGTGAATTCGGTCTGTACC 59.797 52.381 0.04 0.00 42.95 3.34
85 86 2.642139 TCGGTGAATTCGGTCTGTAC 57.358 50.000 0.04 0.00 0.00 2.90
86 87 2.559668 AGTTCGGTGAATTCGGTCTGTA 59.440 45.455 0.04 0.00 0.00 2.74
87 88 1.343465 AGTTCGGTGAATTCGGTCTGT 59.657 47.619 0.04 0.00 0.00 3.41
88 89 2.080286 AGTTCGGTGAATTCGGTCTG 57.920 50.000 0.04 0.00 0.00 3.51
89 90 2.833631 AAGTTCGGTGAATTCGGTCT 57.166 45.000 0.04 0.00 0.00 3.85
90 91 5.541098 AATTAAGTTCGGTGAATTCGGTC 57.459 39.130 0.04 0.00 0.00 4.79
91 92 5.541098 GAATTAAGTTCGGTGAATTCGGT 57.459 39.130 0.04 0.00 30.90 4.69
103 104 9.062674 GCAATTCTAAAAGACCGAATTAAGTTC 57.937 33.333 0.00 0.00 36.06 3.01
104 105 8.793592 AGCAATTCTAAAAGACCGAATTAAGTT 58.206 29.630 0.00 0.00 36.06 2.66
105 106 8.336801 AGCAATTCTAAAAGACCGAATTAAGT 57.663 30.769 0.00 0.00 36.06 2.24
108 109 8.671028 GGTTAGCAATTCTAAAAGACCGAATTA 58.329 33.333 0.00 0.00 38.86 1.40
109 110 7.535997 GGTTAGCAATTCTAAAAGACCGAATT 58.464 34.615 0.00 0.00 38.86 2.17
110 111 6.183360 CGGTTAGCAATTCTAAAAGACCGAAT 60.183 38.462 14.31 0.00 44.64 3.34
111 112 5.121142 CGGTTAGCAATTCTAAAAGACCGAA 59.879 40.000 14.31 0.00 44.64 4.30
112 113 4.628333 CGGTTAGCAATTCTAAAAGACCGA 59.372 41.667 14.31 0.00 44.64 4.69
113 114 4.628333 TCGGTTAGCAATTCTAAAAGACCG 59.372 41.667 13.78 13.78 43.87 4.79
114 115 6.108097 CTCGGTTAGCAATTCTAAAAGACC 57.892 41.667 0.00 0.00 38.86 3.85
129 130 2.642139 TCGGTACAAAGCTCGGTTAG 57.358 50.000 0.00 0.00 0.00 2.34
130 131 2.353011 CCTTCGGTACAAAGCTCGGTTA 60.353 50.000 0.00 0.00 0.00 2.85
131 132 1.607251 CCTTCGGTACAAAGCTCGGTT 60.607 52.381 0.00 0.00 0.00 4.44
132 133 0.037605 CCTTCGGTACAAAGCTCGGT 60.038 55.000 0.00 0.00 0.00 4.69
133 134 0.037605 ACCTTCGGTACAAAGCTCGG 60.038 55.000 0.00 0.00 32.11 4.63
134 135 1.792006 AACCTTCGGTACAAAGCTCG 58.208 50.000 0.00 0.00 33.12 5.03
135 136 3.808116 GAAACCTTCGGTACAAAGCTC 57.192 47.619 0.00 0.00 33.12 4.09
147 148 1.262417 GTGACCGAAACCGAAACCTTC 59.738 52.381 0.00 0.00 0.00 3.46
148 149 1.134310 AGTGACCGAAACCGAAACCTT 60.134 47.619 0.00 0.00 0.00 3.50
149 150 0.466963 AGTGACCGAAACCGAAACCT 59.533 50.000 0.00 0.00 0.00 3.50
150 151 1.262417 GAAGTGACCGAAACCGAAACC 59.738 52.381 0.00 0.00 0.00 3.27
151 152 1.071041 CGAAGTGACCGAAACCGAAAC 60.071 52.381 0.00 0.00 0.00 2.78
152 153 1.210870 CGAAGTGACCGAAACCGAAA 58.789 50.000 0.00 0.00 0.00 3.46
153 154 0.598158 CCGAAGTGACCGAAACCGAA 60.598 55.000 0.00 0.00 0.00 4.30
154 155 1.007038 CCGAAGTGACCGAAACCGA 60.007 57.895 0.00 0.00 0.00 4.69
155 156 2.664436 GCCGAAGTGACCGAAACCG 61.664 63.158 0.00 0.00 0.00 4.44
156 157 0.883370 AAGCCGAAGTGACCGAAACC 60.883 55.000 0.00 0.00 0.00 3.27
157 158 0.511653 GAAGCCGAAGTGACCGAAAC 59.488 55.000 0.00 0.00 0.00 2.78
158 159 0.942410 CGAAGCCGAAGTGACCGAAA 60.942 55.000 0.00 0.00 38.22 3.46
159 160 1.372499 CGAAGCCGAAGTGACCGAA 60.372 57.895 0.00 0.00 38.22 4.30
160 161 2.257371 CGAAGCCGAAGTGACCGA 59.743 61.111 0.00 0.00 38.22 4.69
161 162 2.809601 CCGAAGCCGAAGTGACCG 60.810 66.667 0.00 0.00 38.22 4.79
162 163 1.737008 GACCGAAGCCGAAGTGACC 60.737 63.158 0.00 0.00 38.22 4.02
163 164 1.737008 GGACCGAAGCCGAAGTGAC 60.737 63.158 0.00 0.00 38.22 3.67
164 165 2.154798 CTGGACCGAAGCCGAAGTGA 62.155 60.000 0.00 0.00 38.22 3.41
165 166 1.738099 CTGGACCGAAGCCGAAGTG 60.738 63.158 0.00 0.00 38.22 3.16
166 167 2.657237 CTGGACCGAAGCCGAAGT 59.343 61.111 0.00 0.00 38.22 3.01
167 168 2.788191 AAGCTGGACCGAAGCCGAAG 62.788 60.000 0.24 0.00 41.82 3.79
168 169 1.537814 TAAGCTGGACCGAAGCCGAA 61.538 55.000 0.24 0.00 41.82 4.30
169 170 1.537814 TTAAGCTGGACCGAAGCCGA 61.538 55.000 0.24 0.00 41.82 5.54
170 171 0.672401 TTTAAGCTGGACCGAAGCCG 60.672 55.000 0.24 0.00 41.82 5.52
171 172 1.671328 GATTTAAGCTGGACCGAAGCC 59.329 52.381 0.24 0.00 41.82 4.35
172 173 1.327764 CGATTTAAGCTGGACCGAAGC 59.672 52.381 0.00 0.00 41.15 3.86
173 174 1.933853 CCGATTTAAGCTGGACCGAAG 59.066 52.381 0.00 0.00 0.00 3.79
174 175 1.276989 ACCGATTTAAGCTGGACCGAA 59.723 47.619 0.00 0.00 0.00 4.30
175 176 0.899720 ACCGATTTAAGCTGGACCGA 59.100 50.000 0.00 0.00 0.00 4.69
176 177 1.664151 GAACCGATTTAAGCTGGACCG 59.336 52.381 0.00 0.00 0.00 4.79
177 178 1.664151 CGAACCGATTTAAGCTGGACC 59.336 52.381 0.00 0.00 0.00 4.46
178 179 2.613691 TCGAACCGATTTAAGCTGGAC 58.386 47.619 0.00 0.00 0.00 4.02
179 180 3.536956 ATCGAACCGATTTAAGCTGGA 57.463 42.857 0.00 0.00 44.59 3.86
180 181 5.728351 TTTATCGAACCGATTTAAGCTGG 57.272 39.130 7.17 0.00 44.59 4.85
197 198 8.091385 ACATATAACCCGAAAACCGATTTATC 57.909 34.615 0.00 0.00 41.76 1.75
198 199 8.454570 AACATATAACCCGAAAACCGATTTAT 57.545 30.769 0.00 0.00 41.76 1.40
199 200 7.551974 TGAACATATAACCCGAAAACCGATTTA 59.448 33.333 0.00 0.00 41.76 1.40
200 201 6.374894 TGAACATATAACCCGAAAACCGATTT 59.625 34.615 0.00 0.00 41.76 2.17
201 202 5.881443 TGAACATATAACCCGAAAACCGATT 59.119 36.000 0.00 0.00 41.76 3.34
202 203 5.295045 GTGAACATATAACCCGAAAACCGAT 59.705 40.000 0.00 0.00 41.76 4.18
203 204 4.630940 GTGAACATATAACCCGAAAACCGA 59.369 41.667 0.00 0.00 41.76 4.69
204 205 4.201841 GGTGAACATATAACCCGAAAACCG 60.202 45.833 0.00 0.00 38.18 4.44
205 206 4.096833 GGGTGAACATATAACCCGAAAACC 59.903 45.833 0.00 0.00 44.02 3.27
206 207 5.239359 GGGTGAACATATAACCCGAAAAC 57.761 43.478 0.00 0.00 44.02 2.43
213 214 5.309806 AGGTGATAGGGGTGAACATATAACC 59.690 44.000 0.00 0.00 31.54 2.85
214 215 6.231211 CAGGTGATAGGGGTGAACATATAAC 58.769 44.000 0.00 0.00 0.00 1.89
215 216 5.221843 GCAGGTGATAGGGGTGAACATATAA 60.222 44.000 0.00 0.00 0.00 0.98
216 217 4.286032 GCAGGTGATAGGGGTGAACATATA 59.714 45.833 0.00 0.00 0.00 0.86
217 218 3.073062 GCAGGTGATAGGGGTGAACATAT 59.927 47.826 0.00 0.00 0.00 1.78
218 219 2.438021 GCAGGTGATAGGGGTGAACATA 59.562 50.000 0.00 0.00 0.00 2.29
219 220 1.212935 GCAGGTGATAGGGGTGAACAT 59.787 52.381 0.00 0.00 0.00 2.71
220 221 0.618458 GCAGGTGATAGGGGTGAACA 59.382 55.000 0.00 0.00 0.00 3.18
221 222 0.618458 TGCAGGTGATAGGGGTGAAC 59.382 55.000 0.00 0.00 0.00 3.18
222 223 1.212688 CATGCAGGTGATAGGGGTGAA 59.787 52.381 0.00 0.00 0.00 3.18
223 224 0.839277 CATGCAGGTGATAGGGGTGA 59.161 55.000 0.00 0.00 0.00 4.02
224 225 0.839277 TCATGCAGGTGATAGGGGTG 59.161 55.000 0.00 0.00 0.00 4.61
225 226 1.422781 CATCATGCAGGTGATAGGGGT 59.577 52.381 2.53 0.00 36.72 4.95
226 227 1.422781 ACATCATGCAGGTGATAGGGG 59.577 52.381 2.53 0.00 36.72 4.79
227 228 2.882761 CAACATCATGCAGGTGATAGGG 59.117 50.000 2.53 0.00 36.72 3.53
228 229 3.812262 TCAACATCATGCAGGTGATAGG 58.188 45.455 2.53 0.00 36.72 2.57
229 230 5.278315 CCAATCAACATCATGCAGGTGATAG 60.278 44.000 15.27 8.61 36.72 2.08
230 231 4.581409 CCAATCAACATCATGCAGGTGATA 59.419 41.667 15.27 0.00 36.72 2.15
231 232 3.383505 CCAATCAACATCATGCAGGTGAT 59.616 43.478 10.76 10.76 39.34 3.06
232 233 2.756207 CCAATCAACATCATGCAGGTGA 59.244 45.455 7.30 7.30 0.00 4.02
233 234 2.494471 ACCAATCAACATCATGCAGGTG 59.506 45.455 0.00 0.00 0.00 4.00
234 235 2.494471 CACCAATCAACATCATGCAGGT 59.506 45.455 0.00 0.00 0.00 4.00
235 236 2.494471 ACACCAATCAACATCATGCAGG 59.506 45.455 0.00 0.00 0.00 4.85
236 237 3.507786 CACACCAATCAACATCATGCAG 58.492 45.455 0.00 0.00 0.00 4.41
237 238 2.231721 CCACACCAATCAACATCATGCA 59.768 45.455 0.00 0.00 0.00 3.96
238 239 2.492881 TCCACACCAATCAACATCATGC 59.507 45.455 0.00 0.00 0.00 4.06
239 240 4.787260 TTCCACACCAATCAACATCATG 57.213 40.909 0.00 0.00 0.00 3.07
240 241 4.221262 CCTTTCCACACCAATCAACATCAT 59.779 41.667 0.00 0.00 0.00 2.45
241 242 3.573538 CCTTTCCACACCAATCAACATCA 59.426 43.478 0.00 0.00 0.00 3.07
242 243 3.573967 ACCTTTCCACACCAATCAACATC 59.426 43.478 0.00 0.00 0.00 3.06
243 244 3.321682 CACCTTTCCACACCAATCAACAT 59.678 43.478 0.00 0.00 0.00 2.71
244 245 2.692557 CACCTTTCCACACCAATCAACA 59.307 45.455 0.00 0.00 0.00 3.33
245 246 2.693074 ACACCTTTCCACACCAATCAAC 59.307 45.455 0.00 0.00 0.00 3.18
246 247 2.692557 CACACCTTTCCACACCAATCAA 59.307 45.455 0.00 0.00 0.00 2.57
247 248 2.305928 CACACCTTTCCACACCAATCA 58.694 47.619 0.00 0.00 0.00 2.57
248 249 2.293399 GACACACCTTTCCACACCAATC 59.707 50.000 0.00 0.00 0.00 2.67
249 250 2.306847 GACACACCTTTCCACACCAAT 58.693 47.619 0.00 0.00 0.00 3.16
250 251 1.004862 TGACACACCTTTCCACACCAA 59.995 47.619 0.00 0.00 0.00 3.67
251 252 0.621082 TGACACACCTTTCCACACCA 59.379 50.000 0.00 0.00 0.00 4.17
252 253 1.134220 TCTGACACACCTTTCCACACC 60.134 52.381 0.00 0.00 0.00 4.16
253 254 2.325583 TCTGACACACCTTTCCACAC 57.674 50.000 0.00 0.00 0.00 3.82
254 255 2.437651 TCATCTGACACACCTTTCCACA 59.562 45.455 0.00 0.00 0.00 4.17
255 256 2.808543 GTCATCTGACACACCTTTCCAC 59.191 50.000 5.46 0.00 44.18 4.02
256 257 3.126001 GTCATCTGACACACCTTTCCA 57.874 47.619 5.46 0.00 44.18 3.53
267 268 7.981789 TGTCACCTGATTTATAAGTCATCTGAC 59.018 37.037 24.16 24.16 45.08 3.51
268 269 8.078060 TGTCACCTGATTTATAAGTCATCTGA 57.922 34.615 10.71 10.88 0.00 3.27
269 270 8.607459 GTTGTCACCTGATTTATAAGTCATCTG 58.393 37.037 10.71 9.09 0.00 2.90
270 271 7.770897 GGTTGTCACCTGATTTATAAGTCATCT 59.229 37.037 10.71 0.00 40.44 2.90
271 272 7.552687 TGGTTGTCACCTGATTTATAAGTCATC 59.447 37.037 10.71 0.54 44.61 2.92
272 273 7.402054 TGGTTGTCACCTGATTTATAAGTCAT 58.598 34.615 10.71 0.00 44.61 3.06
273 274 6.774673 TGGTTGTCACCTGATTTATAAGTCA 58.225 36.000 9.97 9.97 44.61 3.41
274 275 7.681939 TTGGTTGTCACCTGATTTATAAGTC 57.318 36.000 1.17 1.17 44.61 3.01
275 276 7.504238 TGTTTGGTTGTCACCTGATTTATAAGT 59.496 33.333 0.00 0.00 44.61 2.24
276 277 7.881142 TGTTTGGTTGTCACCTGATTTATAAG 58.119 34.615 0.00 0.00 44.61 1.73
277 278 7.825331 TGTTTGGTTGTCACCTGATTTATAA 57.175 32.000 0.00 0.00 44.61 0.98
278 279 7.523052 GCTTGTTTGGTTGTCACCTGATTTATA 60.523 37.037 0.00 0.00 44.61 0.98
279 280 6.723298 TTGTTTGGTTGTCACCTGATTTAT 57.277 33.333 0.00 0.00 44.61 1.40
280 281 5.451242 GCTTGTTTGGTTGTCACCTGATTTA 60.451 40.000 0.00 0.00 44.61 1.40
281 282 4.680440 GCTTGTTTGGTTGTCACCTGATTT 60.680 41.667 0.00 0.00 44.61 2.17
282 283 3.181476 GCTTGTTTGGTTGTCACCTGATT 60.181 43.478 0.00 0.00 44.61 2.57
283 284 2.362077 GCTTGTTTGGTTGTCACCTGAT 59.638 45.455 0.00 0.00 44.61 2.90
284 285 1.748493 GCTTGTTTGGTTGTCACCTGA 59.252 47.619 0.00 0.00 44.61 3.86
285 286 1.533756 CGCTTGTTTGGTTGTCACCTG 60.534 52.381 0.00 0.00 44.61 4.00
286 287 0.738389 CGCTTGTTTGGTTGTCACCT 59.262 50.000 0.00 0.00 44.61 4.00
287 288 0.454196 ACGCTTGTTTGGTTGTCACC 59.546 50.000 0.00 0.00 44.56 4.02
288 289 1.131504 TCACGCTTGTTTGGTTGTCAC 59.868 47.619 0.00 0.00 0.00 3.67
289 290 1.131504 GTCACGCTTGTTTGGTTGTCA 59.868 47.619 0.00 0.00 0.00 3.58
290 291 1.400494 AGTCACGCTTGTTTGGTTGTC 59.600 47.619 0.00 0.00 0.00 3.18
291 292 1.459450 AGTCACGCTTGTTTGGTTGT 58.541 45.000 0.00 0.00 0.00 3.32
292 293 2.559998 AAGTCACGCTTGTTTGGTTG 57.440 45.000 0.00 0.00 35.80 3.77
293 294 6.380095 TTTATAAGTCACGCTTGTTTGGTT 57.620 33.333 0.00 0.00 38.05 3.67
294 295 6.205853 TGATTTATAAGTCACGCTTGTTTGGT 59.794 34.615 6.58 0.00 38.05 3.67
295 296 6.523201 GTGATTTATAAGTCACGCTTGTTTGG 59.477 38.462 21.01 0.00 38.05 3.28
296 297 7.479070 GTGATTTATAAGTCACGCTTGTTTG 57.521 36.000 21.01 0.00 38.05 2.93
314 315 9.574516 AGTCAGGTGATTTAAAACTAGTGATTT 57.425 29.630 0.00 0.00 0.00 2.17
315 316 9.574516 AAGTCAGGTGATTTAAAACTAGTGATT 57.425 29.630 0.00 0.00 0.00 2.57
346 347 4.067972 TGGTTTCAGTAAGTCACCTGAC 57.932 45.455 0.00 0.00 45.08 3.51
347 348 4.764050 TTGGTTTCAGTAAGTCACCTGA 57.236 40.909 0.00 0.00 0.00 3.86
348 349 4.638421 TGTTTGGTTTCAGTAAGTCACCTG 59.362 41.667 0.00 0.00 0.00 4.00
349 350 4.850680 TGTTTGGTTTCAGTAAGTCACCT 58.149 39.130 0.00 0.00 0.00 4.00
350 351 4.036380 CCTGTTTGGTTTCAGTAAGTCACC 59.964 45.833 0.00 0.00 0.00 4.02
351 352 4.036380 CCCTGTTTGGTTTCAGTAAGTCAC 59.964 45.833 0.00 0.00 0.00 3.67
352 353 4.204012 CCCTGTTTGGTTTCAGTAAGTCA 58.796 43.478 0.00 0.00 0.00 3.41
353 354 3.004419 GCCCTGTTTGGTTTCAGTAAGTC 59.996 47.826 0.00 0.00 0.00 3.01
354 355 2.956333 GCCCTGTTTGGTTTCAGTAAGT 59.044 45.455 0.00 0.00 0.00 2.24
355 356 2.296190 GGCCCTGTTTGGTTTCAGTAAG 59.704 50.000 0.00 0.00 0.00 2.34
356 357 2.091555 AGGCCCTGTTTGGTTTCAGTAA 60.092 45.455 0.00 0.00 0.00 2.24
357 358 1.497286 AGGCCCTGTTTGGTTTCAGTA 59.503 47.619 0.00 0.00 0.00 2.74
358 359 0.261696 AGGCCCTGTTTGGTTTCAGT 59.738 50.000 0.00 0.00 0.00 3.41
359 360 2.286365 TAGGCCCTGTTTGGTTTCAG 57.714 50.000 0.00 0.00 0.00 3.02
360 361 2.091555 ACTTAGGCCCTGTTTGGTTTCA 60.092 45.455 0.00 0.00 0.00 2.69
361 362 2.557056 GACTTAGGCCCTGTTTGGTTTC 59.443 50.000 0.00 0.00 0.00 2.78
362 363 2.091555 TGACTTAGGCCCTGTTTGGTTT 60.092 45.455 0.00 0.00 0.00 3.27
363 364 1.497286 TGACTTAGGCCCTGTTTGGTT 59.503 47.619 0.00 0.00 0.00 3.67
364 365 1.145571 TGACTTAGGCCCTGTTTGGT 58.854 50.000 0.00 0.00 0.00 3.67
365 366 2.514458 ATGACTTAGGCCCTGTTTGG 57.486 50.000 0.00 0.00 0.00 3.28
366 367 4.589908 ACTTATGACTTAGGCCCTGTTTG 58.410 43.478 0.00 0.00 0.00 2.93
367 368 4.929146 ACTTATGACTTAGGCCCTGTTT 57.071 40.909 0.00 0.00 0.00 2.83
368 369 4.589908 CAACTTATGACTTAGGCCCTGTT 58.410 43.478 0.00 0.00 0.00 3.16
369 370 3.622455 GCAACTTATGACTTAGGCCCTGT 60.622 47.826 0.00 0.00 0.00 4.00
370 371 2.945668 GCAACTTATGACTTAGGCCCTG 59.054 50.000 0.00 0.00 0.00 4.45
371 372 2.846827 AGCAACTTATGACTTAGGCCCT 59.153 45.455 0.00 0.00 0.00 5.19
372 373 3.206964 GAGCAACTTATGACTTAGGCCC 58.793 50.000 0.00 0.00 0.00 5.80
373 374 3.206964 GGAGCAACTTATGACTTAGGCC 58.793 50.000 0.00 0.00 0.00 5.19
374 375 3.623510 GTGGAGCAACTTATGACTTAGGC 59.376 47.826 0.00 0.00 0.00 3.93
375 376 4.192317 GGTGGAGCAACTTATGACTTAGG 58.808 47.826 0.00 0.00 0.00 2.69
376 377 4.192317 GGGTGGAGCAACTTATGACTTAG 58.808 47.826 0.00 0.00 0.00 2.18
377 378 3.054655 GGGGTGGAGCAACTTATGACTTA 60.055 47.826 0.00 0.00 0.00 2.24
378 379 2.290960 GGGGTGGAGCAACTTATGACTT 60.291 50.000 0.00 0.00 0.00 3.01
379 380 1.282157 GGGGTGGAGCAACTTATGACT 59.718 52.381 0.00 0.00 0.00 3.41
380 381 1.004277 TGGGGTGGAGCAACTTATGAC 59.996 52.381 0.00 0.00 0.00 3.06
381 382 1.367346 TGGGGTGGAGCAACTTATGA 58.633 50.000 0.00 0.00 0.00 2.15
382 383 1.818674 GTTGGGGTGGAGCAACTTATG 59.181 52.381 0.00 0.00 0.00 1.90
383 384 1.710809 AGTTGGGGTGGAGCAACTTAT 59.289 47.619 0.00 0.00 34.63 1.73
384 385 1.145571 AGTTGGGGTGGAGCAACTTA 58.854 50.000 0.00 0.00 34.63 2.24
385 386 0.261696 AAGTTGGGGTGGAGCAACTT 59.738 50.000 0.00 0.00 41.36 2.66
386 387 1.145571 TAAGTTGGGGTGGAGCAACT 58.854 50.000 0.00 0.00 39.27 3.16
387 388 1.989706 TTAAGTTGGGGTGGAGCAAC 58.010 50.000 0.00 0.00 0.00 4.17
388 389 2.696187 GTTTTAAGTTGGGGTGGAGCAA 59.304 45.455 0.00 0.00 0.00 3.91
389 390 2.091555 AGTTTTAAGTTGGGGTGGAGCA 60.092 45.455 0.00 0.00 0.00 4.26
390 391 2.594131 AGTTTTAAGTTGGGGTGGAGC 58.406 47.619 0.00 0.00 0.00 4.70
391 392 7.668469 ACTTATAAGTTTTAAGTTGGGGTGGAG 59.332 37.037 12.50 0.00 36.70 3.86
392 393 7.528675 ACTTATAAGTTTTAAGTTGGGGTGGA 58.471 34.615 12.50 0.00 36.70 4.02
393 394 7.449086 TGACTTATAAGTTTTAAGTTGGGGTGG 59.551 37.037 18.96 0.00 39.40 4.61
394 395 8.294577 GTGACTTATAAGTTTTAAGTTGGGGTG 58.705 37.037 18.96 0.00 39.40 4.61
395 396 7.449395 GGTGACTTATAAGTTTTAAGTTGGGGT 59.551 37.037 18.96 0.00 39.40 4.95
396 397 7.094075 GGGTGACTTATAAGTTTTAAGTTGGGG 60.094 40.741 18.96 0.00 39.40 4.96
397 398 7.668469 AGGGTGACTTATAAGTTTTAAGTTGGG 59.332 37.037 18.96 0.00 39.40 4.12
398 399 8.631480 AGGGTGACTTATAAGTTTTAAGTTGG 57.369 34.615 18.96 0.00 39.40 3.77
399 400 9.503399 AGAGGGTGACTTATAAGTTTTAAGTTG 57.497 33.333 18.96 0.00 39.40 3.16
404 405 9.856162 ACAAAAGAGGGTGACTTATAAGTTTTA 57.144 29.630 18.96 6.80 39.88 1.52
405 406 8.630037 CACAAAAGAGGGTGACTTATAAGTTTT 58.370 33.333 18.96 10.67 39.88 2.43
406 407 7.778382 ACACAAAAGAGGGTGACTTATAAGTTT 59.222 33.333 18.96 5.24 39.88 2.66
407 408 7.228706 CACACAAAAGAGGGTGACTTATAAGTT 59.771 37.037 18.96 3.04 39.88 2.66
408 409 6.710744 CACACAAAAGAGGGTGACTTATAAGT 59.289 38.462 18.05 18.05 43.16 2.24
409 410 6.149474 CCACACAAAAGAGGGTGACTTATAAG 59.851 42.308 11.05 11.05 38.38 1.73
410 411 6.001460 CCACACAAAAGAGGGTGACTTATAA 58.999 40.000 0.00 0.00 38.38 0.98
411 412 5.514136 CCCACACAAAAGAGGGTGACTTATA 60.514 44.000 0.00 0.00 38.38 0.98
412 413 4.398319 CCACACAAAAGAGGGTGACTTAT 58.602 43.478 0.00 0.00 38.38 1.73
413 414 3.434453 CCCACACAAAAGAGGGTGACTTA 60.434 47.826 0.00 0.00 38.38 2.24
414 415 2.654863 CCACACAAAAGAGGGTGACTT 58.345 47.619 0.00 0.00 38.38 3.01
415 416 1.133792 CCCACACAAAAGAGGGTGACT 60.134 52.381 0.00 0.00 38.38 3.41
416 417 1.318576 CCCACACAAAAGAGGGTGAC 58.681 55.000 0.00 0.00 38.38 3.67
417 418 3.819245 CCCACACAAAAGAGGGTGA 57.181 52.632 0.00 0.00 38.38 4.02
420 421 0.539669 GGGACCCACACAAAAGAGGG 60.540 60.000 5.33 0.00 44.11 4.30
421 422 0.184933 TGGGACCCACACAAAAGAGG 59.815 55.000 9.95 0.00 0.00 3.69
422 423 3.819245 TGGGACCCACACAAAAGAG 57.181 52.632 9.95 0.00 0.00 2.85
432 433 2.546643 ATGCATGTGGTGGGACCCA 61.547 57.895 9.95 9.95 37.50 4.51
433 434 2.053865 CATGCATGTGGTGGGACCC 61.054 63.158 18.91 2.45 37.50 4.46
434 435 0.396139 ATCATGCATGTGGTGGGACC 60.396 55.000 25.43 0.00 39.22 4.46
435 436 0.742505 CATCATGCATGTGGTGGGAC 59.257 55.000 25.43 0.00 0.00 4.46
436 437 0.332293 ACATCATGCATGTGGTGGGA 59.668 50.000 25.43 5.50 44.70 4.37
437 438 2.890612 ACATCATGCATGTGGTGGG 58.109 52.632 25.43 12.15 44.70 4.61
444 445 5.219633 CCACATCAATACACATCATGCATG 58.780 41.667 21.07 21.07 38.64 4.06
445 446 4.279922 CCCACATCAATACACATCATGCAT 59.720 41.667 0.00 0.00 0.00 3.96
446 447 3.633065 CCCACATCAATACACATCATGCA 59.367 43.478 0.00 0.00 0.00 3.96
447 448 3.884693 TCCCACATCAATACACATCATGC 59.115 43.478 0.00 0.00 0.00 4.06
448 449 5.009310 CCTTCCCACATCAATACACATCATG 59.991 44.000 0.00 0.00 0.00 3.07
449 450 5.135383 CCTTCCCACATCAATACACATCAT 58.865 41.667 0.00 0.00 0.00 2.45
450 451 4.018506 ACCTTCCCACATCAATACACATCA 60.019 41.667 0.00 0.00 0.00 3.07
451 452 4.336433 CACCTTCCCACATCAATACACATC 59.664 45.833 0.00 0.00 0.00 3.06
452 453 4.263905 ACACCTTCCCACATCAATACACAT 60.264 41.667 0.00 0.00 0.00 3.21
453 454 3.073798 ACACCTTCCCACATCAATACACA 59.926 43.478 0.00 0.00 0.00 3.72
454 455 3.686016 ACACCTTCCCACATCAATACAC 58.314 45.455 0.00 0.00 0.00 2.90
455 456 4.078537 CAACACCTTCCCACATCAATACA 58.921 43.478 0.00 0.00 0.00 2.29
456 457 4.079253 ACAACACCTTCCCACATCAATAC 58.921 43.478 0.00 0.00 0.00 1.89
457 458 4.202514 TGACAACACCTTCCCACATCAATA 60.203 41.667 0.00 0.00 0.00 1.90
458 459 3.157087 GACAACACCTTCCCACATCAAT 58.843 45.455 0.00 0.00 0.00 2.57
459 460 2.092158 TGACAACACCTTCCCACATCAA 60.092 45.455 0.00 0.00 0.00 2.57
460 461 1.492599 TGACAACACCTTCCCACATCA 59.507 47.619 0.00 0.00 0.00 3.07
461 462 2.270352 TGACAACACCTTCCCACATC 57.730 50.000 0.00 0.00 0.00 3.06
462 463 2.091885 ACTTGACAACACCTTCCCACAT 60.092 45.455 0.00 0.00 0.00 3.21
463 464 1.283613 ACTTGACAACACCTTCCCACA 59.716 47.619 0.00 0.00 0.00 4.17
464 465 1.676006 CACTTGACAACACCTTCCCAC 59.324 52.381 0.00 0.00 0.00 4.61
465 466 1.562008 TCACTTGACAACACCTTCCCA 59.438 47.619 0.00 0.00 0.00 4.37
466 467 1.947456 GTCACTTGACAACACCTTCCC 59.053 52.381 4.43 0.00 44.18 3.97
490 491 9.537192 CATGCATGTTTGGTTATCATCTATTTT 57.463 29.630 18.91 0.00 0.00 1.82
491 492 8.916062 TCATGCATGTTTGGTTATCATCTATTT 58.084 29.630 25.43 0.00 0.00 1.40
492 493 8.355169 GTCATGCATGTTTGGTTATCATCTATT 58.645 33.333 25.43 0.00 0.00 1.73
493 494 7.722728 AGTCATGCATGTTTGGTTATCATCTAT 59.277 33.333 25.43 0.00 0.00 1.98
494 495 7.056006 AGTCATGCATGTTTGGTTATCATCTA 58.944 34.615 25.43 0.00 0.00 1.98
495 496 5.889853 AGTCATGCATGTTTGGTTATCATCT 59.110 36.000 25.43 1.36 0.00 2.90
496 497 6.140303 AGTCATGCATGTTTGGTTATCATC 57.860 37.500 25.43 0.00 0.00 2.92
497 498 6.534475 AAGTCATGCATGTTTGGTTATCAT 57.466 33.333 25.43 0.00 0.00 2.45
498 499 5.981088 AAGTCATGCATGTTTGGTTATCA 57.019 34.783 25.43 0.00 0.00 2.15
499 500 9.669353 CTTATAAGTCATGCATGTTTGGTTATC 57.331 33.333 25.43 6.94 0.00 1.75
500 501 9.189156 ACTTATAAGTCATGCATGTTTGGTTAT 57.811 29.630 25.43 20.33 32.86 1.89
501 502 8.574251 ACTTATAAGTCATGCATGTTTGGTTA 57.426 30.769 25.43 15.93 32.86 2.85
502 503 7.466746 ACTTATAAGTCATGCATGTTTGGTT 57.533 32.000 25.43 14.50 32.86 3.67
519 520 9.802039 AGGTGATTTAAAACCAGTGACTTATAA 57.198 29.630 10.89 0.00 39.05 0.98
520 521 9.226606 CAGGTGATTTAAAACCAGTGACTTATA 57.773 33.333 10.89 0.00 39.05 0.98
521 522 7.942341 TCAGGTGATTTAAAACCAGTGACTTAT 59.058 33.333 10.89 0.00 39.05 1.73
522 523 7.227910 GTCAGGTGATTTAAAACCAGTGACTTA 59.772 37.037 16.74 0.00 38.06 2.24
523 524 6.039382 GTCAGGTGATTTAAAACCAGTGACTT 59.961 38.462 16.74 0.00 38.06 3.01
524 525 5.531287 GTCAGGTGATTTAAAACCAGTGACT 59.469 40.000 16.74 0.00 38.06 3.41
525 526 5.531287 AGTCAGGTGATTTAAAACCAGTGAC 59.469 40.000 16.49 16.49 39.87 3.67
526 527 5.690865 AGTCAGGTGATTTAAAACCAGTGA 58.309 37.500 10.89 4.87 39.05 3.41
527 528 6.391227 AAGTCAGGTGATTTAAAACCAGTG 57.609 37.500 10.89 2.89 39.05 3.66
528 529 9.802039 TTATAAGTCAGGTGATTTAAAACCAGT 57.198 29.630 10.89 0.00 39.05 4.00
530 531 9.802039 ACTTATAAGTCAGGTGATTTAAAACCA 57.198 29.630 12.50 1.47 34.94 3.67
534 535 9.802039 ACCAACTTATAAGTCAGGTGATTTAAA 57.198 29.630 28.42 0.00 42.29 1.52
542 543 6.435292 AAGTCACCAACTTATAAGTCAGGT 57.565 37.500 25.67 25.67 46.55 4.00
554 555 5.836024 TGGGTCTAAATAAGTCACCAACT 57.164 39.130 0.00 0.00 41.10 3.16
555 556 6.263617 TGTTTGGGTCTAAATAAGTCACCAAC 59.736 38.462 0.00 0.00 35.01 3.77
556 557 6.366340 TGTTTGGGTCTAAATAAGTCACCAA 58.634 36.000 0.00 0.00 34.15 3.67
557 558 5.942961 TGTTTGGGTCTAAATAAGTCACCA 58.057 37.500 0.00 0.00 0.00 4.17
558 559 5.414765 CCTGTTTGGGTCTAAATAAGTCACC 59.585 44.000 0.00 0.00 0.00 4.02
559 560 5.106277 GCCTGTTTGGGTCTAAATAAGTCAC 60.106 44.000 0.00 0.00 36.00 3.67
560 561 5.007682 GCCTGTTTGGGTCTAAATAAGTCA 58.992 41.667 0.00 0.00 36.00 3.41
561 562 4.398358 GGCCTGTTTGGGTCTAAATAAGTC 59.602 45.833 0.00 0.00 36.00 3.01
562 563 4.341487 GGCCTGTTTGGGTCTAAATAAGT 58.659 43.478 0.00 0.00 36.00 2.24
563 564 3.699538 GGGCCTGTTTGGGTCTAAATAAG 59.300 47.826 0.84 0.00 36.00 1.73
564 565 3.335484 AGGGCCTGTTTGGGTCTAAATAA 59.665 43.478 4.50 0.00 36.00 1.40
565 566 2.923629 AGGGCCTGTTTGGGTCTAAATA 59.076 45.455 4.50 0.00 36.00 1.40
566 567 1.716503 AGGGCCTGTTTGGGTCTAAAT 59.283 47.619 4.50 0.00 36.00 1.40
567 568 1.074889 GAGGGCCTGTTTGGGTCTAAA 59.925 52.381 12.95 0.00 36.00 1.85
568 569 0.696501 GAGGGCCTGTTTGGGTCTAA 59.303 55.000 12.95 0.00 36.00 2.10
569 570 0.474854 TGAGGGCCTGTTTGGGTCTA 60.475 55.000 12.95 0.00 36.00 2.59
570 571 1.360393 TTGAGGGCCTGTTTGGGTCT 61.360 55.000 12.95 0.00 36.00 3.85
571 572 0.251787 ATTGAGGGCCTGTTTGGGTC 60.252 55.000 12.95 0.00 36.00 4.46
572 573 0.251787 GATTGAGGGCCTGTTTGGGT 60.252 55.000 12.95 0.00 36.00 4.51
573 574 1.315257 CGATTGAGGGCCTGTTTGGG 61.315 60.000 12.95 0.00 36.00 4.12
574 575 1.315257 CCGATTGAGGGCCTGTTTGG 61.315 60.000 12.95 4.67 39.35 3.28
575 576 0.609131 ACCGATTGAGGGCCTGTTTG 60.609 55.000 12.95 0.00 35.02 2.93
576 577 0.322546 GACCGATTGAGGGCCTGTTT 60.323 55.000 12.95 0.00 31.48 2.83
577 578 1.201429 AGACCGATTGAGGGCCTGTT 61.201 55.000 12.95 0.00 41.33 3.16
578 579 1.613630 AGACCGATTGAGGGCCTGT 60.614 57.895 12.95 0.00 41.33 4.00
579 580 1.144936 GAGACCGATTGAGGGCCTG 59.855 63.158 12.95 0.00 41.33 4.85
580 581 0.692419 ATGAGACCGATTGAGGGCCT 60.692 55.000 5.25 5.25 41.33 5.19
581 582 0.250081 GATGAGACCGATTGAGGGCC 60.250 60.000 0.00 0.00 41.33 5.80
582 583 0.598680 CGATGAGACCGATTGAGGGC 60.599 60.000 0.00 0.00 40.48 5.19
583 584 1.032794 TCGATGAGACCGATTGAGGG 58.967 55.000 0.00 0.00 35.02 4.30
584 585 2.099921 AGTTCGATGAGACCGATTGAGG 59.900 50.000 0.00 0.00 35.84 3.86
585 586 3.367607 GAGTTCGATGAGACCGATTGAG 58.632 50.000 0.00 0.00 35.84 3.02
621 622 4.644234 TCAGCTTTGGTTCTCAACAATTGA 59.356 37.500 13.59 0.00 38.17 2.57
684 687 7.334421 GCTGTGTTGATATACTCTCCTGAAAAA 59.666 37.037 0.00 0.00 0.00 1.94
719 723 4.566759 GTGTTTTTCTCTTTGACCAAAGGC 59.433 41.667 18.93 5.53 45.80 4.35
749 753 0.698238 TCACATAGCCCAAACAGCCT 59.302 50.000 0.00 0.00 0.00 4.58
769 773 2.361610 CTGCTTGTTGGGCCCGAT 60.362 61.111 17.05 0.00 0.00 4.18
779 783 3.494223 GGGTTTGTTAAATGGCTGCTTGT 60.494 43.478 0.00 0.00 0.00 3.16
812 817 0.246635 TTTCTCTACTGGCCGCTGTC 59.753 55.000 0.00 0.00 0.00 3.51
817 822 3.600388 AGAATGTTTTCTCTACTGGCCG 58.400 45.455 0.00 0.00 37.69 6.13
847 852 3.123804 TCTGTTCTTTTCTGCGACAGAC 58.876 45.455 8.73 0.00 40.46 3.51
883 892 0.506932 CGAGTCGCGAACACAAATGT 59.493 50.000 12.06 0.00 44.57 2.71
884 893 0.785708 GCGAGTCGCGAACACAAATG 60.786 55.000 23.39 0.00 44.55 2.32
885 894 1.491563 GCGAGTCGCGAACACAAAT 59.508 52.632 23.39 0.00 44.55 2.32
886 895 2.925352 GCGAGTCGCGAACACAAA 59.075 55.556 23.39 0.00 44.55 2.83
896 905 2.026301 GGGAATCCTCGCGAGTCG 59.974 66.667 32.41 19.49 36.41 4.18
960 978 3.190738 TTTGTGCACGGGGAGAGGG 62.191 63.158 13.13 0.00 0.00 4.30
1043 1061 1.965754 CTTCCTGGGGAGCGAGAAGG 61.966 65.000 0.00 0.00 31.21 3.46
1108 1126 2.904434 GGTTGAAGAGGAGGTAGTGGAA 59.096 50.000 0.00 0.00 0.00 3.53
1256 1304 0.189574 TTGAGTTTCCCCCAATGCCA 59.810 50.000 0.00 0.00 0.00 4.92
1257 1305 0.897621 CTTGAGTTTCCCCCAATGCC 59.102 55.000 0.00 0.00 0.00 4.40
1258 1306 0.897621 CCTTGAGTTTCCCCCAATGC 59.102 55.000 0.00 0.00 0.00 3.56
1259 1307 2.309136 ACCTTGAGTTTCCCCCAATG 57.691 50.000 0.00 0.00 0.00 2.82
1260 1308 2.290705 CGTACCTTGAGTTTCCCCCAAT 60.291 50.000 0.00 0.00 0.00 3.16
1261 1309 1.072648 CGTACCTTGAGTTTCCCCCAA 59.927 52.381 0.00 0.00 0.00 4.12
1282 1330 5.192927 TCAATCGATTGGAAAACCTAGCAT 58.807 37.500 32.03 0.00 38.30 3.79
1351 1400 1.071385 CCAGCTAAATCGCCCAGAGAT 59.929 52.381 0.00 0.00 0.00 2.75
1404 1453 4.022849 GGGGGAAATTTATCATCGAAGCAG 60.023 45.833 0.00 0.00 0.00 4.24
1584 1777 1.616159 ACTACGCCAAACTGCCATTT 58.384 45.000 0.00 0.00 0.00 2.32
1683 1881 2.576317 GTCGGAGTAGTCGCACGC 60.576 66.667 0.00 0.00 0.00 5.34
1991 2204 0.034896 GCCGGAACTTGTTCTCCTCA 59.965 55.000 5.05 0.00 0.00 3.86
2444 2687 2.355193 GCCCAGCTCCTTCTCGTCT 61.355 63.158 0.00 0.00 0.00 4.18
2875 3135 0.106967 TACCAAAGCACACCACAGCA 60.107 50.000 0.00 0.00 0.00 4.41
2877 3137 1.068333 GCATACCAAAGCACACCACAG 60.068 52.381 0.00 0.00 0.00 3.66
2878 3138 0.958091 GCATACCAAAGCACACCACA 59.042 50.000 0.00 0.00 0.00 4.17
3011 3305 7.535599 GCGGCTAATAAGAATGAAAAAGATAGC 59.464 37.037 0.00 0.00 33.17 2.97
3014 3308 6.513393 CGGCGGCTAATAAGAATGAAAAAGAT 60.513 38.462 7.61 0.00 0.00 2.40
3087 3383 5.516044 TCCTCTTGCAGTACTACCAAGATA 58.484 41.667 25.95 18.72 42.65 1.98
3091 3387 3.644265 TGTTCCTCTTGCAGTACTACCAA 59.356 43.478 0.00 1.45 0.00 3.67
3093 3389 3.955650 TGTTCCTCTTGCAGTACTACC 57.044 47.619 0.00 0.00 0.00 3.18
3095 3391 6.206634 CCAAAATTGTTCCTCTTGCAGTACTA 59.793 38.462 0.00 0.00 0.00 1.82
3096 3392 5.010012 CCAAAATTGTTCCTCTTGCAGTACT 59.990 40.000 0.00 0.00 0.00 2.73
3232 3532 2.031870 GTTGGGCCTTCACTTTTGTCT 58.968 47.619 4.53 0.00 0.00 3.41
3412 3712 1.617947 AAGCTGACCGATGAGGGGAC 61.618 60.000 0.00 0.00 46.96 4.46
3413 3713 0.032515 TAAGCTGACCGATGAGGGGA 60.033 55.000 0.00 0.00 46.96 4.81
3506 3808 1.002624 GGTGCGGGAAGTGGATGAA 60.003 57.895 0.00 0.00 0.00 2.57
3521 3823 0.179000 GAGTGTGGCCTAGATGGGTG 59.821 60.000 3.32 0.00 36.00 4.61
3522 3824 1.330655 CGAGTGTGGCCTAGATGGGT 61.331 60.000 3.32 0.00 36.00 4.51
3641 3952 1.152204 TGAACTCCACGGGGAAGGA 60.152 57.895 8.34 0.00 44.38 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.