Multiple sequence alignment - TraesCS7B01G097400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G097400 chr7B 100.000 3026 0 0 1 3026 112115201 112112176 0.000000e+00 5589.0
1 TraesCS7B01G097400 chr7B 94.005 1151 44 12 1215 2360 112297820 112296690 0.000000e+00 1720.0
2 TraesCS7B01G097400 chr7B 98.464 586 9 0 1467 2052 727232958 727232373 0.000000e+00 1033.0
3 TraesCS7B01G097400 chr7B 85.066 683 61 23 535 1203 112298570 112297915 0.000000e+00 658.0
4 TraesCS7B01G097400 chr7B 88.889 306 25 6 40 338 680675460 680675763 4.770000e-98 368.0
5 TraesCS7B01G097400 chr7B 92.593 189 11 1 153 338 439595882 439595694 4.970000e-68 268.0
6 TraesCS7B01G097400 chr7A 90.652 1626 90 24 845 2430 150329911 150328308 0.000000e+00 2104.0
7 TraesCS7B01G097400 chr7D 92.532 1232 69 11 1214 2429 149849635 149848411 0.000000e+00 1744.0
8 TraesCS7B01G097400 chr7D 91.252 583 50 1 2445 3026 191502140 191501558 0.000000e+00 793.0
9 TraesCS7B01G097400 chr7D 85.227 352 21 17 845 1196 149850063 149849743 1.740000e-87 333.0
10 TraesCS7B01G097400 chr7D 84.615 234 29 5 534 762 149850352 149850121 3.040000e-55 226.0
11 TraesCS7B01G097400 chr7D 100.000 30 0 0 866 895 149850267 149850296 4.210000e-04 56.5
12 TraesCS7B01G097400 chr4B 94.189 1153 43 13 1215 2360 402738375 402737240 0.000000e+00 1736.0
13 TraesCS7B01G097400 chr4B 92.295 584 44 1 2444 3026 338422046 338422629 0.000000e+00 828.0
14 TraesCS7B01G097400 chr4B 92.110 583 45 1 2444 3026 394598631 394599212 0.000000e+00 821.0
15 TraesCS7B01G097400 chr4B 92.096 582 46 0 2445 3026 421706411 421706992 0.000000e+00 821.0
16 TraesCS7B01G097400 chr4B 84.919 683 61 24 535 1203 402739124 402738470 0.000000e+00 652.0
17 TraesCS7B01G097400 chr4B 80.579 242 31 14 289 517 646254196 646253958 4.010000e-39 172.0
18 TraesCS7B01G097400 chr4B 92.647 68 3 2 452 518 580501537 580501471 2.480000e-16 97.1
19 TraesCS7B01G097400 chr4B 88.333 60 7 0 1000 1059 62871467 62871526 4.180000e-09 73.1
20 TraesCS7B01G097400 chr2B 96.353 521 15 2 1 518 22663807 22663288 0.000000e+00 854.0
21 TraesCS7B01G097400 chr2B 89.062 256 13 8 96 338 794431514 794431261 1.360000e-78 303.0
22 TraesCS7B01G097400 chr4A 96.146 519 15 3 1 516 696167335 696166819 0.000000e+00 843.0
23 TraesCS7B01G097400 chr1B 95.769 520 19 1 1 517 676117071 676117590 0.000000e+00 835.0
24 TraesCS7B01G097400 chr1B 95.522 67 1 2 452 517 74119993 74119928 4.130000e-19 106.0
25 TraesCS7B01G097400 chr4D 92.295 584 43 2 2445 3026 381394324 381393741 0.000000e+00 828.0
26 TraesCS7B01G097400 chr2D 92.308 572 43 1 2456 3026 118326800 118326229 0.000000e+00 811.0
27 TraesCS7B01G097400 chr2D 91.776 304 22 2 38 338 542306549 542306852 1.300000e-113 420.0
28 TraesCS7B01G097400 chr2D 91.694 301 24 1 37 336 38529439 38529739 1.680000e-112 416.0
29 TraesCS7B01G097400 chrUn 91.767 583 47 1 2445 3026 73965438 73966020 0.000000e+00 809.0
30 TraesCS7B01G097400 chr3B 91.424 583 48 2 2445 3026 384313011 384313592 0.000000e+00 798.0
31 TraesCS7B01G097400 chr3B 91.161 577 49 2 2445 3021 284663602 284664176 0.000000e+00 782.0
32 TraesCS7B01G097400 chr3B 82.308 130 21 2 390 518 805349306 805349178 8.870000e-21 111.0
33 TraesCS7B01G097400 chr1A 88.000 250 21 5 96 338 310351774 310351527 1.370000e-73 287.0
34 TraesCS7B01G097400 chr6A 83.846 130 19 2 390 518 74984085 74984213 4.100000e-24 122.0
35 TraesCS7B01G097400 chr3D 83.721 129 19 2 390 517 47798341 47798468 1.470000e-23 121.0
36 TraesCS7B01G097400 chr6B 88.333 60 7 0 1000 1059 663786049 663785990 4.180000e-09 73.1
37 TraesCS7B01G097400 chr6B 85.938 64 9 0 1000 1063 45729772 45729835 5.410000e-08 69.4
38 TraesCS7B01G097400 chr2A 84.127 63 10 0 1000 1062 53332096 53332034 9.060000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G097400 chr7B 112112176 112115201 3025 True 5589.000000 5589 100.0000 1 3026 1 chr7B.!!$R1 3025
1 TraesCS7B01G097400 chr7B 112296690 112298570 1880 True 1189.000000 1720 89.5355 535 2360 2 chr7B.!!$R4 1825
2 TraesCS7B01G097400 chr7B 727232373 727232958 585 True 1033.000000 1033 98.4640 1467 2052 1 chr7B.!!$R3 585
3 TraesCS7B01G097400 chr7A 150328308 150329911 1603 True 2104.000000 2104 90.6520 845 2430 1 chr7A.!!$R1 1585
4 TraesCS7B01G097400 chr7D 191501558 191502140 582 True 793.000000 793 91.2520 2445 3026 1 chr7D.!!$R1 581
5 TraesCS7B01G097400 chr7D 149848411 149850352 1941 True 767.666667 1744 87.4580 534 2429 3 chr7D.!!$R2 1895
6 TraesCS7B01G097400 chr4B 402737240 402739124 1884 True 1194.000000 1736 89.5540 535 2360 2 chr4B.!!$R3 1825
7 TraesCS7B01G097400 chr4B 338422046 338422629 583 False 828.000000 828 92.2950 2444 3026 1 chr4B.!!$F2 582
8 TraesCS7B01G097400 chr4B 394598631 394599212 581 False 821.000000 821 92.1100 2444 3026 1 chr4B.!!$F3 582
9 TraesCS7B01G097400 chr4B 421706411 421706992 581 False 821.000000 821 92.0960 2445 3026 1 chr4B.!!$F4 581
10 TraesCS7B01G097400 chr2B 22663288 22663807 519 True 854.000000 854 96.3530 1 518 1 chr2B.!!$R1 517
11 TraesCS7B01G097400 chr4A 696166819 696167335 516 True 843.000000 843 96.1460 1 516 1 chr4A.!!$R1 515
12 TraesCS7B01G097400 chr1B 676117071 676117590 519 False 835.000000 835 95.7690 1 517 1 chr1B.!!$F1 516
13 TraesCS7B01G097400 chr4D 381393741 381394324 583 True 828.000000 828 92.2950 2445 3026 1 chr4D.!!$R1 581
14 TraesCS7B01G097400 chr2D 118326229 118326800 571 True 811.000000 811 92.3080 2456 3026 1 chr2D.!!$R1 570
15 TraesCS7B01G097400 chrUn 73965438 73966020 582 False 809.000000 809 91.7670 2445 3026 1 chrUn.!!$F1 581
16 TraesCS7B01G097400 chr3B 384313011 384313592 581 False 798.000000 798 91.4240 2445 3026 1 chr3B.!!$F2 581
17 TraesCS7B01G097400 chr3B 284663602 284664176 574 False 782.000000 782 91.1610 2445 3021 1 chr3B.!!$F1 576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
394 395 0.029433 TCGATGCAGACGAAGATCCG 59.971 55.0 14.67 0.0 36.84 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2381 2545 1.212688 CACCATCCCAATCAGGTAGCA 59.787 52.381 0.0 0.0 34.66 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.682306 GAGAGAGAGAGCGCGAAC 57.318 61.111 12.10 1.76 0.00 3.95
18 19 1.063488 GAGAGAGAGAGCGCGAACC 59.937 63.158 12.10 0.00 0.00 3.62
19 20 2.103340 GAGAGAGAGCGCGAACCC 59.897 66.667 12.10 0.00 0.00 4.11
20 21 2.361865 AGAGAGAGCGCGAACCCT 60.362 61.111 12.10 0.00 0.00 4.34
21 22 1.077644 AGAGAGAGCGCGAACCCTA 60.078 57.895 12.10 0.00 0.00 3.53
22 23 1.098712 AGAGAGAGCGCGAACCCTAG 61.099 60.000 12.10 0.00 0.00 3.02
23 24 2.278923 GAGAGCGCGAACCCTAGC 60.279 66.667 12.10 0.00 0.00 3.42
24 25 3.776659 GAGAGCGCGAACCCTAGCC 62.777 68.421 12.10 0.00 0.00 3.93
47 48 3.578272 CGACGCGGAGGAGGAGAG 61.578 72.222 12.47 0.00 0.00 3.20
48 49 3.213402 GACGCGGAGGAGGAGAGG 61.213 72.222 12.47 0.00 0.00 3.69
49 50 3.700831 GACGCGGAGGAGGAGAGGA 62.701 68.421 12.47 0.00 0.00 3.71
50 51 2.904866 CGCGGAGGAGGAGAGGAG 60.905 72.222 0.00 0.00 0.00 3.69
51 52 2.520741 GCGGAGGAGGAGAGGAGG 60.521 72.222 0.00 0.00 0.00 4.30
52 53 3.063197 GCGGAGGAGGAGAGGAGGA 62.063 68.421 0.00 0.00 0.00 3.71
53 54 1.150536 CGGAGGAGGAGAGGAGGAG 59.849 68.421 0.00 0.00 0.00 3.69
54 55 1.541672 GGAGGAGGAGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
55 56 1.541672 GAGGAGGAGAGGAGGAGGG 59.458 68.421 0.00 0.00 0.00 4.30
56 57 0.996762 GAGGAGGAGAGGAGGAGGGA 60.997 65.000 0.00 0.00 0.00 4.20
57 58 0.998945 AGGAGGAGAGGAGGAGGGAG 60.999 65.000 0.00 0.00 0.00 4.30
58 59 1.541672 GAGGAGAGGAGGAGGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
59 60 2.123033 GGAGAGGAGGAGGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
60 61 2.520741 GAGAGGAGGAGGGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
61 62 4.150454 AGAGGAGGAGGGAGGCGG 62.150 72.222 0.00 0.00 0.00 6.13
62 63 4.467107 GAGGAGGAGGGAGGCGGT 62.467 72.222 0.00 0.00 0.00 5.68
63 64 4.787280 AGGAGGAGGGAGGCGGTG 62.787 72.222 0.00 0.00 0.00 4.94
67 68 4.864334 GGAGGGAGGCGGTGCATG 62.864 72.222 0.00 0.00 0.00 4.06
68 69 3.785859 GAGGGAGGCGGTGCATGA 61.786 66.667 0.00 0.00 0.00 3.07
69 70 3.746949 GAGGGAGGCGGTGCATGAG 62.747 68.421 0.00 0.00 0.00 2.90
70 71 4.864334 GGGAGGCGGTGCATGAGG 62.864 72.222 0.00 0.00 0.00 3.86
71 72 4.864334 GGAGGCGGTGCATGAGGG 62.864 72.222 0.00 0.00 0.00 4.30
96 97 3.494378 CATGCCGTGCTCCTCTTG 58.506 61.111 0.00 0.00 0.00 3.02
97 98 2.437359 ATGCCGTGCTCCTCTTGC 60.437 61.111 0.00 0.00 0.00 4.01
98 99 2.964310 ATGCCGTGCTCCTCTTGCT 61.964 57.895 0.00 0.00 0.00 3.91
99 100 3.123620 GCCGTGCTCCTCTTGCTG 61.124 66.667 0.00 0.00 0.00 4.41
100 101 2.659016 CCGTGCTCCTCTTGCTGA 59.341 61.111 0.00 0.00 0.00 4.26
101 102 1.447489 CCGTGCTCCTCTTGCTGAG 60.447 63.158 1.17 1.17 42.30 3.35
114 115 4.869440 CTGAGCAGCGAGAGGGCG 62.869 72.222 0.00 0.00 38.18 6.13
130 131 4.089757 CGGGGAGGAGGGGAAGGA 62.090 72.222 0.00 0.00 0.00 3.36
131 132 2.040359 GGGGAGGAGGGGAAGGAG 60.040 72.222 0.00 0.00 0.00 3.69
132 133 2.770475 GGGAGGAGGGGAAGGAGC 60.770 72.222 0.00 0.00 0.00 4.70
133 134 3.157949 GGAGGAGGGGAAGGAGCG 61.158 72.222 0.00 0.00 0.00 5.03
134 135 2.042843 GAGGAGGGGAAGGAGCGA 60.043 66.667 0.00 0.00 0.00 4.93
135 136 2.364448 AGGAGGGGAAGGAGCGAC 60.364 66.667 0.00 0.00 0.00 5.19
136 137 3.839432 GGAGGGGAAGGAGCGACG 61.839 72.222 0.00 0.00 0.00 5.12
137 138 3.839432 GAGGGGAAGGAGCGACGG 61.839 72.222 0.00 0.00 0.00 4.79
141 142 4.856607 GGAAGGAGCGACGGCGAG 62.857 72.222 18.90 8.50 46.35 5.03
142 143 4.117661 GAAGGAGCGACGGCGAGT 62.118 66.667 18.90 0.00 46.35 4.18
143 144 4.421479 AAGGAGCGACGGCGAGTG 62.421 66.667 18.90 3.31 46.35 3.51
156 157 4.408821 GAGTGGGCATGGTGGCGA 62.409 66.667 0.00 0.00 44.78 5.54
195 196 2.511600 GGCGACGTGGAGAATGGG 60.512 66.667 0.11 0.00 0.00 4.00
196 197 3.195698 GCGACGTGGAGAATGGGC 61.196 66.667 0.11 0.00 0.00 5.36
197 198 2.579201 CGACGTGGAGAATGGGCT 59.421 61.111 0.00 0.00 0.00 5.19
198 199 1.813859 CGACGTGGAGAATGGGCTA 59.186 57.895 0.00 0.00 0.00 3.93
199 200 0.249073 CGACGTGGAGAATGGGCTAG 60.249 60.000 0.00 0.00 0.00 3.42
200 201 0.105039 GACGTGGAGAATGGGCTAGG 59.895 60.000 0.00 0.00 0.00 3.02
201 202 1.338136 ACGTGGAGAATGGGCTAGGG 61.338 60.000 0.00 0.00 0.00 3.53
202 203 1.338136 CGTGGAGAATGGGCTAGGGT 61.338 60.000 0.00 0.00 0.00 4.34
203 204 0.919710 GTGGAGAATGGGCTAGGGTT 59.080 55.000 0.00 0.00 0.00 4.11
204 205 2.124411 GTGGAGAATGGGCTAGGGTTA 58.876 52.381 0.00 0.00 0.00 2.85
205 206 2.104963 GTGGAGAATGGGCTAGGGTTAG 59.895 54.545 0.00 0.00 0.00 2.34
206 207 1.700186 GGAGAATGGGCTAGGGTTAGG 59.300 57.143 0.00 0.00 0.00 2.69
207 208 1.700186 GAGAATGGGCTAGGGTTAGGG 59.300 57.143 0.00 0.00 0.00 3.53
208 209 0.771755 GAATGGGCTAGGGTTAGGGG 59.228 60.000 0.00 0.00 0.00 4.79
209 210 0.349091 AATGGGCTAGGGTTAGGGGA 59.651 55.000 0.00 0.00 0.00 4.81
210 211 0.349091 ATGGGCTAGGGTTAGGGGAA 59.651 55.000 0.00 0.00 0.00 3.97
211 212 0.349091 TGGGCTAGGGTTAGGGGAAT 59.651 55.000 0.00 0.00 0.00 3.01
212 213 0.771755 GGGCTAGGGTTAGGGGAATG 59.228 60.000 0.00 0.00 0.00 2.67
213 214 1.697945 GGGCTAGGGTTAGGGGAATGA 60.698 57.143 0.00 0.00 0.00 2.57
214 215 1.700186 GGCTAGGGTTAGGGGAATGAG 59.300 57.143 0.00 0.00 0.00 2.90
215 216 1.700186 GCTAGGGTTAGGGGAATGAGG 59.300 57.143 0.00 0.00 0.00 3.86
216 217 2.696158 GCTAGGGTTAGGGGAATGAGGA 60.696 54.545 0.00 0.00 0.00 3.71
217 218 2.198334 AGGGTTAGGGGAATGAGGAG 57.802 55.000 0.00 0.00 0.00 3.69
218 219 0.474614 GGGTTAGGGGAATGAGGAGC 59.525 60.000 0.00 0.00 0.00 4.70
219 220 0.106894 GGTTAGGGGAATGAGGAGCG 59.893 60.000 0.00 0.00 0.00 5.03
220 221 0.106894 GTTAGGGGAATGAGGAGCGG 59.893 60.000 0.00 0.00 0.00 5.52
221 222 1.054406 TTAGGGGAATGAGGAGCGGG 61.054 60.000 0.00 0.00 0.00 6.13
222 223 2.965226 TAGGGGAATGAGGAGCGGGG 62.965 65.000 0.00 0.00 0.00 5.73
223 224 3.878667 GGGAATGAGGAGCGGGGG 61.879 72.222 0.00 0.00 0.00 5.40
238 239 3.324246 GGGGGAAGTGAGGAGATGA 57.676 57.895 0.00 0.00 0.00 2.92
239 240 1.127343 GGGGGAAGTGAGGAGATGAG 58.873 60.000 0.00 0.00 0.00 2.90
240 241 1.127343 GGGGAAGTGAGGAGATGAGG 58.873 60.000 0.00 0.00 0.00 3.86
241 242 1.343478 GGGGAAGTGAGGAGATGAGGA 60.343 57.143 0.00 0.00 0.00 3.71
242 243 2.038659 GGGAAGTGAGGAGATGAGGAG 58.961 57.143 0.00 0.00 0.00 3.69
243 244 2.358721 GGGAAGTGAGGAGATGAGGAGA 60.359 54.545 0.00 0.00 0.00 3.71
244 245 2.958355 GGAAGTGAGGAGATGAGGAGAG 59.042 54.545 0.00 0.00 0.00 3.20
245 246 2.754012 AGTGAGGAGATGAGGAGAGG 57.246 55.000 0.00 0.00 0.00 3.69
246 247 2.213310 AGTGAGGAGATGAGGAGAGGA 58.787 52.381 0.00 0.00 0.00 3.71
247 248 2.091885 AGTGAGGAGATGAGGAGAGGAC 60.092 54.545 0.00 0.00 0.00 3.85
248 249 1.133945 TGAGGAGATGAGGAGAGGACG 60.134 57.143 0.00 0.00 0.00 4.79
249 250 1.142060 GAGGAGATGAGGAGAGGACGA 59.858 57.143 0.00 0.00 0.00 4.20
250 251 1.133915 AGGAGATGAGGAGAGGACGAC 60.134 57.143 0.00 0.00 0.00 4.34
251 252 0.941542 GAGATGAGGAGAGGACGACG 59.058 60.000 0.00 0.00 0.00 5.12
252 253 1.098712 AGATGAGGAGAGGACGACGC 61.099 60.000 0.00 0.00 0.00 5.19
253 254 1.077357 ATGAGGAGAGGACGACGCT 60.077 57.895 0.00 0.00 0.00 5.07
254 255 1.380403 ATGAGGAGAGGACGACGCTG 61.380 60.000 0.00 0.00 0.00 5.18
255 256 2.034376 AGGAGAGGACGACGCTGT 59.966 61.111 0.00 0.00 0.00 4.40
256 257 1.984321 GAGGAGAGGACGACGCTGTC 61.984 65.000 0.00 0.00 38.17 3.51
269 270 3.592814 CTGTCGGCGCCCTATCGA 61.593 66.667 23.46 11.68 0.00 3.59
271 272 4.642542 GTCGGCGCCCTATCGACC 62.643 72.222 23.46 5.45 44.96 4.79
276 277 3.303928 CGCCCTATCGACCCCCTC 61.304 72.222 0.00 0.00 0.00 4.30
277 278 2.201771 GCCCTATCGACCCCCTCT 59.798 66.667 0.00 0.00 0.00 3.69
278 279 1.909287 GCCCTATCGACCCCCTCTC 60.909 68.421 0.00 0.00 0.00 3.20
279 280 1.228925 CCCTATCGACCCCCTCTCC 60.229 68.421 0.00 0.00 0.00 3.71
280 281 1.731324 CCCTATCGACCCCCTCTCCT 61.731 65.000 0.00 0.00 0.00 3.69
281 282 0.540830 CCTATCGACCCCCTCTCCTG 60.541 65.000 0.00 0.00 0.00 3.86
282 283 0.186386 CTATCGACCCCCTCTCCTGT 59.814 60.000 0.00 0.00 0.00 4.00
283 284 0.106167 TATCGACCCCCTCTCCTGTG 60.106 60.000 0.00 0.00 0.00 3.66
284 285 1.875422 ATCGACCCCCTCTCCTGTGA 61.875 60.000 0.00 0.00 0.00 3.58
285 286 1.381872 CGACCCCCTCTCCTGTGAT 60.382 63.158 0.00 0.00 0.00 3.06
286 287 1.680522 CGACCCCCTCTCCTGTGATG 61.681 65.000 0.00 0.00 0.00 3.07
287 288 1.977293 GACCCCCTCTCCTGTGATGC 61.977 65.000 0.00 0.00 0.00 3.91
288 289 2.503061 CCCCTCTCCTGTGATGCG 59.497 66.667 0.00 0.00 0.00 4.73
289 290 2.060383 CCCCTCTCCTGTGATGCGA 61.060 63.158 0.00 0.00 0.00 5.10
290 291 1.617018 CCCCTCTCCTGTGATGCGAA 61.617 60.000 0.00 0.00 0.00 4.70
291 292 0.250234 CCCTCTCCTGTGATGCGAAA 59.750 55.000 0.00 0.00 0.00 3.46
292 293 1.339055 CCCTCTCCTGTGATGCGAAAA 60.339 52.381 0.00 0.00 0.00 2.29
293 294 2.005451 CCTCTCCTGTGATGCGAAAAG 58.995 52.381 0.00 0.00 0.00 2.27
294 295 2.354103 CCTCTCCTGTGATGCGAAAAGA 60.354 50.000 0.00 0.00 0.00 2.52
295 296 2.670414 CTCTCCTGTGATGCGAAAAGAC 59.330 50.000 0.00 0.00 0.00 3.01
296 297 1.391485 CTCCTGTGATGCGAAAAGACG 59.609 52.381 0.00 0.00 0.00 4.18
297 298 1.000394 TCCTGTGATGCGAAAAGACGA 60.000 47.619 0.00 0.00 35.09 4.20
298 299 1.391485 CCTGTGATGCGAAAAGACGAG 59.609 52.381 0.00 0.00 35.09 4.18
299 300 2.328473 CTGTGATGCGAAAAGACGAGA 58.672 47.619 0.00 0.00 35.09 4.04
300 301 2.731451 CTGTGATGCGAAAAGACGAGAA 59.269 45.455 0.00 0.00 35.09 2.87
301 302 3.325870 TGTGATGCGAAAAGACGAGAAT 58.674 40.909 0.00 0.00 35.09 2.40
302 303 4.490743 TGTGATGCGAAAAGACGAGAATA 58.509 39.130 0.00 0.00 35.09 1.75
303 304 4.326278 TGTGATGCGAAAAGACGAGAATAC 59.674 41.667 0.00 0.00 35.09 1.89
304 305 3.863424 TGATGCGAAAAGACGAGAATACC 59.137 43.478 0.00 0.00 35.09 2.73
305 306 2.613691 TGCGAAAAGACGAGAATACCC 58.386 47.619 0.00 0.00 35.09 3.69
306 307 2.232941 TGCGAAAAGACGAGAATACCCT 59.767 45.455 0.00 0.00 35.09 4.34
307 308 2.858941 GCGAAAAGACGAGAATACCCTC 59.141 50.000 0.00 0.00 35.09 4.30
321 322 3.083349 CCTCGGTGGGGCATGAGA 61.083 66.667 0.00 0.00 0.00 3.27
322 323 2.446848 CCTCGGTGGGGCATGAGAT 61.447 63.158 0.00 0.00 0.00 2.75
323 324 1.528824 CTCGGTGGGGCATGAGATT 59.471 57.895 0.00 0.00 0.00 2.40
324 325 0.107017 CTCGGTGGGGCATGAGATTT 60.107 55.000 0.00 0.00 0.00 2.17
325 326 1.140852 CTCGGTGGGGCATGAGATTTA 59.859 52.381 0.00 0.00 0.00 1.40
326 327 1.134220 TCGGTGGGGCATGAGATTTAC 60.134 52.381 0.00 0.00 0.00 2.01
327 328 1.408127 CGGTGGGGCATGAGATTTACA 60.408 52.381 0.00 0.00 0.00 2.41
328 329 2.301346 GGTGGGGCATGAGATTTACAG 58.699 52.381 0.00 0.00 0.00 2.74
329 330 2.301346 GTGGGGCATGAGATTTACAGG 58.699 52.381 0.00 0.00 0.00 4.00
330 331 1.322442 GGGGCATGAGATTTACAGGC 58.678 55.000 0.00 0.00 42.94 4.85
331 332 0.947244 GGGCATGAGATTTACAGGCG 59.053 55.000 0.00 0.00 44.27 5.52
332 333 0.947244 GGCATGAGATTTACAGGCGG 59.053 55.000 0.00 0.00 44.27 6.13
333 334 1.668419 GCATGAGATTTACAGGCGGT 58.332 50.000 0.00 0.00 35.53 5.68
334 335 1.331756 GCATGAGATTTACAGGCGGTG 59.668 52.381 0.00 0.00 35.53 4.94
335 336 1.942657 CATGAGATTTACAGGCGGTGG 59.057 52.381 0.00 0.00 0.00 4.61
336 337 0.392461 TGAGATTTACAGGCGGTGGC 60.392 55.000 0.00 0.00 38.90 5.01
337 338 0.392461 GAGATTTACAGGCGGTGGCA 60.392 55.000 0.00 0.00 42.47 4.92
338 339 0.676782 AGATTTACAGGCGGTGGCAC 60.677 55.000 9.70 9.70 42.47 5.01
339 340 1.654023 GATTTACAGGCGGTGGCACC 61.654 60.000 26.95 26.95 42.47 5.01
340 341 2.419011 ATTTACAGGCGGTGGCACCA 62.419 55.000 34.11 14.26 38.47 4.17
341 342 3.835790 TTACAGGCGGTGGCACCAC 62.836 63.158 34.11 25.82 45.49 4.16
349 350 3.918544 GTGGCACCACACAACAGT 58.081 55.556 14.97 0.00 45.53 3.55
350 351 1.433064 GTGGCACCACACAACAGTG 59.567 57.895 14.97 0.00 45.53 3.66
351 352 1.001517 TGGCACCACACAACAGTGT 60.002 52.632 0.00 0.00 46.90 3.55
352 353 0.610509 TGGCACCACACAACAGTGTT 60.611 50.000 1.64 1.64 43.66 3.32
353 354 0.530288 GGCACCACACAACAGTGTTT 59.470 50.000 5.57 0.00 43.66 2.83
354 355 1.067213 GGCACCACACAACAGTGTTTT 60.067 47.619 5.57 0.00 43.66 2.43
355 356 1.991965 GCACCACACAACAGTGTTTTG 59.008 47.619 18.38 18.38 43.66 2.44
356 357 2.609244 GCACCACACAACAGTGTTTTGT 60.609 45.455 19.62 19.62 43.66 2.83
357 358 3.648009 CACCACACAACAGTGTTTTGTT 58.352 40.909 22.10 8.96 43.66 2.83
358 359 3.672867 CACCACACAACAGTGTTTTGTTC 59.327 43.478 22.10 0.00 43.66 3.18
359 360 2.914214 CCACACAACAGTGTTTTGTTCG 59.086 45.455 22.10 13.43 43.66 3.95
360 361 3.365465 CCACACAACAGTGTTTTGTTCGA 60.365 43.478 22.10 0.00 43.66 3.71
361 362 4.411327 CACACAACAGTGTTTTGTTCGAT 58.589 39.130 22.10 1.29 43.66 3.59
362 363 4.495472 CACACAACAGTGTTTTGTTCGATC 59.505 41.667 22.10 0.00 43.66 3.69
363 364 4.035017 CACAACAGTGTTTTGTTCGATCC 58.965 43.478 13.00 0.00 39.17 3.36
364 365 3.242608 ACAACAGTGTTTTGTTCGATCCG 60.243 43.478 5.57 0.00 39.17 4.18
365 366 2.828877 ACAGTGTTTTGTTCGATCCGA 58.171 42.857 0.00 0.00 0.00 4.55
366 367 2.542595 ACAGTGTTTTGTTCGATCCGAC 59.457 45.455 0.00 0.00 34.89 4.79
367 368 1.790623 AGTGTTTTGTTCGATCCGACG 59.209 47.619 0.00 0.00 34.89 5.12
368 369 1.136446 GTGTTTTGTTCGATCCGACGG 60.136 52.381 7.84 7.84 34.89 4.79
369 370 0.441145 GTTTTGTTCGATCCGACGGG 59.559 55.000 15.25 0.00 34.89 5.28
370 371 1.293267 TTTTGTTCGATCCGACGGGC 61.293 55.000 15.25 5.81 34.89 6.13
371 372 3.975083 TTGTTCGATCCGACGGGCG 62.975 63.158 15.25 17.81 34.89 6.13
384 385 3.928779 GGGCGGGATCGATGCAGA 61.929 66.667 20.34 0.00 39.00 4.26
385 386 2.663188 GGCGGGATCGATGCAGAC 60.663 66.667 20.34 14.33 39.00 3.51
386 387 3.032609 GCGGGATCGATGCAGACG 61.033 66.667 20.34 14.35 39.00 4.18
387 388 2.721859 CGGGATCGATGCAGACGA 59.278 61.111 19.14 18.23 43.65 4.20
388 389 1.065764 CGGGATCGATGCAGACGAA 59.934 57.895 19.14 6.74 42.80 3.85
389 390 0.936764 CGGGATCGATGCAGACGAAG 60.937 60.000 19.14 9.93 42.80 3.79
390 391 0.385751 GGGATCGATGCAGACGAAGA 59.614 55.000 19.14 1.57 42.80 2.87
391 392 1.000283 GGGATCGATGCAGACGAAGAT 60.000 52.381 19.14 6.62 42.80 2.40
392 393 2.323959 GGATCGATGCAGACGAAGATC 58.676 52.381 19.43 13.54 42.80 2.75
393 394 2.323959 GATCGATGCAGACGAAGATCC 58.676 52.381 19.43 6.50 42.80 3.36
394 395 0.029433 TCGATGCAGACGAAGATCCG 59.971 55.000 14.67 0.00 36.84 4.18
395 396 0.029433 CGATGCAGACGAAGATCCGA 59.971 55.000 9.93 0.00 0.00 4.55
396 397 1.482278 GATGCAGACGAAGATCCGAC 58.518 55.000 0.00 0.00 0.00 4.79
397 398 0.248661 ATGCAGACGAAGATCCGACG 60.249 55.000 0.00 0.79 0.00 5.12
398 399 1.586564 GCAGACGAAGATCCGACGG 60.587 63.158 7.84 7.84 0.00 4.79
399 400 1.586564 CAGACGAAGATCCGACGGC 60.587 63.158 9.66 0.00 35.11 5.68
400 401 2.278661 GACGAAGATCCGACGGCC 60.279 66.667 9.66 3.31 0.00 6.13
401 402 3.060020 GACGAAGATCCGACGGCCA 62.060 63.158 9.66 0.00 0.00 5.36
402 403 2.278857 CGAAGATCCGACGGCCAG 60.279 66.667 9.66 0.00 0.00 4.85
403 404 2.107141 GAAGATCCGACGGCCAGG 59.893 66.667 9.66 2.49 0.00 4.45
404 405 2.363795 AAGATCCGACGGCCAGGA 60.364 61.111 9.66 13.18 41.30 3.86
407 408 3.606662 ATCCGACGGCCAGGATCG 61.607 66.667 16.20 12.32 43.27 3.69
410 411 4.933064 CGACGGCCAGGATCGCTC 62.933 72.222 2.24 0.00 0.00 5.03
411 412 3.532155 GACGGCCAGGATCGCTCT 61.532 66.667 2.24 0.00 0.00 4.09
412 413 3.781770 GACGGCCAGGATCGCTCTG 62.782 68.421 2.24 0.00 0.00 3.35
417 418 3.514417 CAGGATCGCTCTGGACGA 58.486 61.111 0.00 0.00 44.75 4.20
418 419 1.809869 CAGGATCGCTCTGGACGAA 59.190 57.895 0.00 0.00 43.71 3.85
419 420 0.173481 CAGGATCGCTCTGGACGAAA 59.827 55.000 0.00 0.00 43.71 3.46
420 421 0.895530 AGGATCGCTCTGGACGAAAA 59.104 50.000 0.00 0.00 43.71 2.29
421 422 1.482593 AGGATCGCTCTGGACGAAAAT 59.517 47.619 0.00 0.00 43.71 1.82
422 423 1.861575 GGATCGCTCTGGACGAAAATC 59.138 52.381 0.00 0.00 43.71 2.17
423 424 1.861575 GATCGCTCTGGACGAAAATCC 59.138 52.381 0.00 0.00 43.71 3.01
424 425 0.457853 TCGCTCTGGACGAAAATCCG 60.458 55.000 0.00 0.00 42.24 4.18
425 426 0.457853 CGCTCTGGACGAAAATCCGA 60.458 55.000 0.00 0.00 42.24 4.55
426 427 1.000145 GCTCTGGACGAAAATCCGAC 59.000 55.000 0.00 0.00 42.24 4.79
427 428 1.269166 CTCTGGACGAAAATCCGACG 58.731 55.000 0.00 0.00 42.24 5.12
428 429 0.108992 TCTGGACGAAAATCCGACGG 60.109 55.000 7.84 7.84 42.24 4.79
429 430 1.693083 CTGGACGAAAATCCGACGGC 61.693 60.000 9.66 0.00 42.24 5.68
430 431 3.087176 GACGAAAATCCGACGGCC 58.913 61.111 9.66 0.00 0.00 6.13
431 432 2.435410 ACGAAAATCCGACGGCCC 60.435 61.111 9.66 0.00 0.00 5.80
432 433 3.199891 CGAAAATCCGACGGCCCC 61.200 66.667 9.66 0.00 0.00 5.80
433 434 3.199891 GAAAATCCGACGGCCCCG 61.200 66.667 9.66 4.96 46.03 5.73
434 435 3.668980 GAAAATCCGACGGCCCCGA 62.669 63.158 14.44 0.00 42.83 5.14
435 436 2.935627 GAAAATCCGACGGCCCCGAT 62.936 60.000 14.44 0.00 42.83 4.18
436 437 2.935627 AAAATCCGACGGCCCCGATC 62.936 60.000 14.44 6.49 42.83 3.69
440 441 4.143333 CGACGGCCCCGATCAGTT 62.143 66.667 14.44 0.00 42.83 3.16
441 442 2.267961 GACGGCCCCGATCAGTTT 59.732 61.111 14.44 0.00 42.83 2.66
442 443 2.046314 ACGGCCCCGATCAGTTTG 60.046 61.111 14.44 0.00 42.83 2.93
443 444 2.824041 CGGCCCCGATCAGTTTGG 60.824 66.667 0.00 0.00 42.83 3.28
444 445 2.674754 GGCCCCGATCAGTTTGGA 59.325 61.111 0.00 0.00 0.00 3.53
445 446 1.001393 GGCCCCGATCAGTTTGGAA 60.001 57.895 0.00 0.00 0.00 3.53
446 447 0.610785 GGCCCCGATCAGTTTGGAAA 60.611 55.000 0.00 0.00 0.00 3.13
447 448 0.811281 GCCCCGATCAGTTTGGAAAG 59.189 55.000 0.00 0.00 0.00 2.62
448 449 0.811281 CCCCGATCAGTTTGGAAAGC 59.189 55.000 0.00 0.00 0.00 3.51
449 450 1.614317 CCCCGATCAGTTTGGAAAGCT 60.614 52.381 0.00 0.00 38.16 3.74
450 451 2.355716 CCCCGATCAGTTTGGAAAGCTA 60.356 50.000 0.00 0.00 34.08 3.32
451 452 3.343617 CCCGATCAGTTTGGAAAGCTAA 58.656 45.455 0.00 0.00 34.08 3.09
452 453 3.947834 CCCGATCAGTTTGGAAAGCTAAT 59.052 43.478 0.00 0.00 34.08 1.73
453 454 4.035675 CCCGATCAGTTTGGAAAGCTAATC 59.964 45.833 0.00 0.00 34.08 1.75
454 455 4.035675 CCGATCAGTTTGGAAAGCTAATCC 59.964 45.833 10.80 10.80 34.08 3.01
455 456 4.260375 CGATCAGTTTGGAAAGCTAATCCG 60.260 45.833 12.46 0.52 34.08 4.18
456 457 4.280436 TCAGTTTGGAAAGCTAATCCGA 57.720 40.909 12.46 8.72 34.08 4.55
457 458 4.000988 TCAGTTTGGAAAGCTAATCCGAC 58.999 43.478 12.46 12.72 34.08 4.79
458 459 3.000727 AGTTTGGAAAGCTAATCCGACG 58.999 45.455 12.46 0.00 34.81 5.12
459 460 2.018542 TTGGAAAGCTAATCCGACGG 57.981 50.000 7.84 7.84 39.98 4.79
460 461 0.461339 TGGAAAGCTAATCCGACGGC 60.461 55.000 9.66 0.00 39.98 5.68
461 462 0.179081 GGAAAGCTAATCCGACGGCT 60.179 55.000 9.66 0.00 36.53 5.52
462 463 0.931005 GAAAGCTAATCCGACGGCTG 59.069 55.000 9.66 0.00 35.08 4.85
463 464 0.535335 AAAGCTAATCCGACGGCTGA 59.465 50.000 9.66 0.00 35.08 4.26
464 465 0.535335 AAGCTAATCCGACGGCTGAA 59.465 50.000 9.66 0.00 35.08 3.02
465 466 0.535335 AGCTAATCCGACGGCTGAAA 59.465 50.000 9.66 0.00 33.50 2.69
466 467 1.066430 AGCTAATCCGACGGCTGAAAA 60.066 47.619 9.66 0.00 33.50 2.29
467 468 1.940613 GCTAATCCGACGGCTGAAAAT 59.059 47.619 9.66 0.00 0.00 1.82
468 469 2.032808 GCTAATCCGACGGCTGAAAATC 60.033 50.000 9.66 0.00 0.00 2.17
469 470 1.379527 AATCCGACGGCTGAAAATCC 58.620 50.000 9.66 0.00 0.00 3.01
470 471 0.251916 ATCCGACGGCTGAAAATCCA 59.748 50.000 9.66 0.00 0.00 3.41
471 472 0.035598 TCCGACGGCTGAAAATCCAA 59.964 50.000 9.66 0.00 0.00 3.53
472 473 0.878416 CCGACGGCTGAAAATCCAAA 59.122 50.000 0.00 0.00 0.00 3.28
473 474 1.401018 CCGACGGCTGAAAATCCAAAC 60.401 52.381 0.00 0.00 0.00 2.93
474 475 1.724654 CGACGGCTGAAAATCCAAACG 60.725 52.381 0.00 0.00 0.00 3.60
475 476 0.039527 ACGGCTGAAAATCCAAACGC 60.040 50.000 0.00 0.00 0.00 4.84
476 477 0.039617 CGGCTGAAAATCCAAACGCA 60.040 50.000 0.00 0.00 0.00 5.24
477 478 1.418373 GGCTGAAAATCCAAACGCAC 58.582 50.000 0.00 0.00 0.00 5.34
478 479 1.052287 GCTGAAAATCCAAACGCACG 58.948 50.000 0.00 0.00 0.00 5.34
479 480 1.685302 CTGAAAATCCAAACGCACGG 58.315 50.000 0.00 0.00 0.00 4.94
480 481 0.312416 TGAAAATCCAAACGCACGGG 59.688 50.000 0.00 0.00 0.00 5.28
481 482 0.594110 GAAAATCCAAACGCACGGGA 59.406 50.000 0.00 0.00 34.70 5.14
482 483 0.596082 AAAATCCAAACGCACGGGAG 59.404 50.000 0.00 0.00 33.47 4.30
483 484 0.250553 AAATCCAAACGCACGGGAGA 60.251 50.000 0.00 0.00 33.47 3.71
484 485 0.673644 AATCCAAACGCACGGGAGAG 60.674 55.000 0.00 0.00 33.47 3.20
485 486 3.423154 CCAAACGCACGGGAGAGC 61.423 66.667 0.00 0.00 43.27 4.09
486 487 2.357517 CAAACGCACGGGAGAGCT 60.358 61.111 0.00 0.00 44.57 4.09
487 488 2.048127 AAACGCACGGGAGAGCTC 60.048 61.111 5.27 5.27 44.57 4.09
500 501 2.363683 GAGAGCTCCATTTTGGTCTGG 58.636 52.381 10.93 0.00 40.53 3.86
501 502 1.988107 AGAGCTCCATTTTGGTCTGGA 59.012 47.619 10.93 0.00 39.23 3.86
502 503 2.087646 GAGCTCCATTTTGGTCTGGAC 58.912 52.381 0.87 0.00 39.03 4.02
503 504 1.707427 AGCTCCATTTTGGTCTGGACT 59.293 47.619 0.67 0.00 39.03 3.85
504 505 2.087646 GCTCCATTTTGGTCTGGACTC 58.912 52.381 0.67 0.00 39.03 3.36
505 506 2.290577 GCTCCATTTTGGTCTGGACTCT 60.291 50.000 0.67 0.00 39.03 3.24
506 507 3.055094 GCTCCATTTTGGTCTGGACTCTA 60.055 47.826 0.67 0.00 39.03 2.43
507 508 4.565652 GCTCCATTTTGGTCTGGACTCTAA 60.566 45.833 0.67 0.00 39.03 2.10
508 509 4.906618 TCCATTTTGGTCTGGACTCTAAC 58.093 43.478 0.67 0.00 39.03 2.34
509 510 4.349636 TCCATTTTGGTCTGGACTCTAACA 59.650 41.667 0.67 0.00 39.03 2.41
510 511 5.070001 CCATTTTGGTCTGGACTCTAACAA 58.930 41.667 0.67 0.00 34.24 2.83
511 512 5.182001 CCATTTTGGTCTGGACTCTAACAAG 59.818 44.000 0.67 0.00 34.24 3.16
512 513 4.351874 TTTGGTCTGGACTCTAACAAGG 57.648 45.455 0.67 0.00 0.00 3.61
513 514 2.257207 TGGTCTGGACTCTAACAAGGG 58.743 52.381 0.67 0.00 0.00 3.95
514 515 1.555533 GGTCTGGACTCTAACAAGGGG 59.444 57.143 0.67 0.00 0.00 4.79
515 516 2.537143 GTCTGGACTCTAACAAGGGGA 58.463 52.381 0.00 0.00 0.00 4.81
516 517 3.108376 GTCTGGACTCTAACAAGGGGAT 58.892 50.000 0.00 0.00 0.00 3.85
517 518 3.107601 TCTGGACTCTAACAAGGGGATG 58.892 50.000 0.00 0.00 0.00 3.51
518 519 2.171448 CTGGACTCTAACAAGGGGATGG 59.829 54.545 0.00 0.00 0.00 3.51
519 520 1.134068 GGACTCTAACAAGGGGATGGC 60.134 57.143 0.00 0.00 0.00 4.40
520 521 0.919710 ACTCTAACAAGGGGATGGCC 59.080 55.000 0.00 0.00 0.00 5.36
521 522 0.918983 CTCTAACAAGGGGATGGCCA 59.081 55.000 8.56 8.56 35.15 5.36
522 523 1.284785 CTCTAACAAGGGGATGGCCAA 59.715 52.381 10.96 0.00 35.15 4.52
523 524 1.284785 TCTAACAAGGGGATGGCCAAG 59.715 52.381 10.96 0.00 35.15 3.61
524 525 1.005924 CTAACAAGGGGATGGCCAAGT 59.994 52.381 10.96 0.00 35.15 3.16
525 526 0.542702 AACAAGGGGATGGCCAAGTG 60.543 55.000 10.96 4.26 35.15 3.16
526 527 2.037847 AAGGGGATGGCCAAGTGC 59.962 61.111 10.96 0.00 40.16 4.40
527 528 3.944250 AAGGGGATGGCCAAGTGCG 62.944 63.158 10.96 0.00 42.61 5.34
611 612 8.840200 ACTATCCATCGATATAACCCTGTTAT 57.160 34.615 0.00 5.00 30.49 1.89
627 631 4.498323 CCTGTTATCTAAGCACGTACGTTC 59.502 45.833 20.23 14.95 0.00 3.95
633 637 1.292061 AAGCACGTACGTTCAGCAAA 58.708 45.000 25.18 0.00 0.00 3.68
635 639 1.260561 AGCACGTACGTTCAGCAAAAG 59.739 47.619 25.18 11.11 0.00 2.27
649 653 4.039488 TCAGCAAAAGAGCCATTGACAATT 59.961 37.500 0.00 0.00 34.23 2.32
728 736 1.520600 TAAGCTCACGTCTGACCGCA 61.521 55.000 1.55 0.00 0.00 5.69
733 741 3.598715 ACGTCTGACCGCAACCGA 61.599 61.111 1.55 0.00 36.29 4.69
735 743 2.654912 CGTCTGACCGCAACCGAAC 61.655 63.158 1.55 0.00 36.29 3.95
762 770 2.896854 CGCGGCCAGTGCACATAT 60.897 61.111 21.04 0.00 40.13 1.78
763 771 2.717485 GCGGCCAGTGCACATATG 59.283 61.111 21.04 8.69 40.13 1.78
800 808 2.511659 ACCTAGCTCTTCACGTGTACA 58.488 47.619 16.51 0.00 0.00 2.90
801 809 2.488545 ACCTAGCTCTTCACGTGTACAG 59.511 50.000 16.51 10.32 0.00 2.74
802 810 2.488545 CCTAGCTCTTCACGTGTACAGT 59.511 50.000 16.51 0.01 0.00 3.55
804 812 3.833545 AGCTCTTCACGTGTACAGTAG 57.166 47.619 16.51 7.03 0.00 2.57
805 813 3.147629 AGCTCTTCACGTGTACAGTAGT 58.852 45.455 16.51 0.00 0.00 2.73
806 814 4.321718 AGCTCTTCACGTGTACAGTAGTA 58.678 43.478 16.51 0.00 0.00 1.82
895 930 0.251341 AAGCCACCCACCATGAGTTC 60.251 55.000 0.00 0.00 0.00 3.01
896 931 1.678970 GCCACCCACCATGAGTTCC 60.679 63.158 0.00 0.00 0.00 3.62
898 933 0.322816 CCACCCACCATGAGTTCCTG 60.323 60.000 0.00 0.00 0.00 3.86
899 934 0.692476 CACCCACCATGAGTTCCTGA 59.308 55.000 0.00 0.00 0.00 3.86
902 937 2.187958 CCCACCATGAGTTCCTGACTA 58.812 52.381 0.00 0.00 39.19 2.59
903 938 2.093447 CCCACCATGAGTTCCTGACTAC 60.093 54.545 0.00 0.00 39.19 2.73
904 939 2.834549 CCACCATGAGTTCCTGACTACT 59.165 50.000 0.00 0.00 39.19 2.57
945 982 3.105283 GCTGAAAGGTAGAACTCCCCTA 58.895 50.000 0.00 0.00 0.00 3.53
956 999 2.046280 ACTCCCCTAGAAGCAACCTT 57.954 50.000 0.00 0.00 0.00 3.50
964 1015 0.472471 AGAAGCAACCTTCCACCGAA 59.528 50.000 0.17 0.00 46.97 4.30
1070 1127 1.812922 CTCACCATGGCAGAGTCGC 60.813 63.158 21.13 0.00 0.00 5.19
1132 1189 1.988956 CACCTCCTCTGCTGCTCCT 60.989 63.158 0.00 0.00 0.00 3.69
1198 1255 2.536066 ACATCACCAGCACCTACACTA 58.464 47.619 0.00 0.00 0.00 2.74
2052 2199 1.137825 CAGAGAAGAGACGACCGCC 59.862 63.158 0.00 0.00 0.00 6.13
2055 2202 4.415332 GAAGAGACGACCGCCGCA 62.415 66.667 0.00 0.00 43.32 5.69
2112 2259 1.292223 GCTGGACGTGACCAAGCTA 59.708 57.895 0.00 0.00 39.59 3.32
2154 2301 1.153249 CCCCGGCGTGTACATGAAT 60.153 57.895 19.38 0.00 0.00 2.57
2163 2310 0.179094 TGTACATGAATCGCGACCCC 60.179 55.000 12.93 3.82 0.00 4.95
2220 2367 2.581354 CTCCACTTCTGCCTCCCG 59.419 66.667 0.00 0.00 0.00 5.14
2255 2402 1.923204 CTTCAACGAGATTCTGCTCCG 59.077 52.381 0.00 0.00 0.00 4.63
2263 2410 2.691674 GATTCTGCTCCGGCTCCTCG 62.692 65.000 0.00 0.00 39.59 4.63
2301 2449 6.204301 AGTGAGACACTCAAAATCAACTGATG 59.796 38.462 2.98 0.00 41.21 3.07
2302 2450 6.203530 GTGAGACACTCAAAATCAACTGATGA 59.796 38.462 2.98 0.00 42.46 2.92
2303 2451 6.426025 TGAGACACTCAAAATCAACTGATGAG 59.574 38.462 7.09 7.09 38.37 2.90
2321 2469 6.941857 TGATGAGGTATTGCTTACTTACACA 58.058 36.000 0.00 0.00 0.00 3.72
2322 2470 7.564793 TGATGAGGTATTGCTTACTTACACAT 58.435 34.615 0.00 0.00 0.00 3.21
2323 2471 7.495606 TGATGAGGTATTGCTTACTTACACATG 59.504 37.037 0.00 0.00 0.00 3.21
2381 2545 6.265876 TCAAGAAATATACACATGGCATGCAT 59.734 34.615 26.70 18.57 0.00 3.96
2408 2580 1.352687 TGATTGGGATGGTGGACGAAA 59.647 47.619 0.00 0.00 0.00 3.46
2414 2586 2.027469 GGGATGGTGGACGAAACTAGTT 60.027 50.000 1.12 1.12 0.00 2.24
2430 2604 4.062991 ACTAGTTTGGAAACCATGTCGTC 58.937 43.478 0.00 0.00 39.71 4.20
2431 2605 2.227194 AGTTTGGAAACCATGTCGTCC 58.773 47.619 0.00 0.00 39.71 4.79
2432 2606 1.950909 GTTTGGAAACCATGTCGTCCA 59.049 47.619 4.76 4.76 38.39 4.02
2433 2607 1.890876 TTGGAAACCATGTCGTCCAG 58.109 50.000 8.11 0.00 41.10 3.86
2434 2608 0.605319 TGGAAACCATGTCGTCCAGC 60.605 55.000 4.76 0.00 35.22 4.85
2435 2609 0.321653 GGAAACCATGTCGTCCAGCT 60.322 55.000 0.00 0.00 0.00 4.24
2436 2610 1.079503 GAAACCATGTCGTCCAGCTC 58.920 55.000 0.00 0.00 0.00 4.09
2437 2611 0.687354 AAACCATGTCGTCCAGCTCT 59.313 50.000 0.00 0.00 0.00 4.09
2438 2612 0.687354 AACCATGTCGTCCAGCTCTT 59.313 50.000 0.00 0.00 0.00 2.85
2439 2613 0.247736 ACCATGTCGTCCAGCTCTTC 59.752 55.000 0.00 0.00 0.00 2.87
2440 2614 0.534412 CCATGTCGTCCAGCTCTTCT 59.466 55.000 0.00 0.00 0.00 2.85
2441 2615 1.470632 CCATGTCGTCCAGCTCTTCTC 60.471 57.143 0.00 0.00 0.00 2.87
2442 2616 1.203287 CATGTCGTCCAGCTCTTCTCA 59.797 52.381 0.00 0.00 0.00 3.27
2443 2617 0.598562 TGTCGTCCAGCTCTTCTCAC 59.401 55.000 0.00 0.00 0.00 3.51
2469 2643 4.794278 TTCTTAAGGTACGCTGATGACA 57.206 40.909 1.85 0.00 0.00 3.58
2477 2651 4.647853 AGGTACGCTGATGACATACCTTAA 59.352 41.667 0.26 0.00 42.39 1.85
2542 2717 4.381718 GCTAGTTAGGAGTCACAAACCGAT 60.382 45.833 0.00 0.00 0.00 4.18
2593 2768 3.120923 GCTCTACGCGACTACTCTATGAC 60.121 52.174 15.93 0.00 0.00 3.06
2618 2793 1.003355 TCCTCCAAAAGCTCCTGCG 60.003 57.895 0.00 0.00 45.42 5.18
2685 2860 0.108615 CTCGTTCTTGATCGTGCCCT 60.109 55.000 1.82 0.00 0.00 5.19
2695 2870 0.537188 ATCGTGCCCTTGTCGAAGAT 59.463 50.000 0.00 0.00 40.67 2.40
2868 3044 1.070758 CCATCCTAGTAATGCAGCGGT 59.929 52.381 0.00 0.00 0.00 5.68
2927 3104 2.100197 TGGTCAACTGTATCCTCCTCG 58.900 52.381 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.578272 CTCTCCTCCTCCGCGTCG 61.578 72.222 4.92 0.00 0.00 5.12
31 32 3.213402 CCTCTCCTCCTCCGCGTC 61.213 72.222 4.92 0.00 0.00 5.19
32 33 3.707640 CTCCTCTCCTCCTCCGCGT 62.708 68.421 4.92 0.00 0.00 6.01
33 34 2.904866 CTCCTCTCCTCCTCCGCG 60.905 72.222 0.00 0.00 0.00 6.46
34 35 2.520741 CCTCCTCTCCTCCTCCGC 60.521 72.222 0.00 0.00 0.00 5.54
35 36 1.150536 CTCCTCCTCTCCTCCTCCG 59.849 68.421 0.00 0.00 0.00 4.63
36 37 1.541672 CCTCCTCCTCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
37 38 0.996762 TCCCTCCTCCTCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
38 39 0.998945 CTCCCTCCTCCTCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
39 40 1.541672 CTCCCTCCTCCTCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
40 41 1.541672 CCTCCCTCCTCCTCTCCTC 59.458 68.421 0.00 0.00 0.00 3.71
41 42 2.710826 GCCTCCCTCCTCCTCTCCT 61.711 68.421 0.00 0.00 0.00 3.69
42 43 2.123033 GCCTCCCTCCTCCTCTCC 60.123 72.222 0.00 0.00 0.00 3.71
43 44 2.520741 CGCCTCCCTCCTCCTCTC 60.521 72.222 0.00 0.00 0.00 3.20
44 45 4.150454 CCGCCTCCCTCCTCCTCT 62.150 72.222 0.00 0.00 0.00 3.69
45 46 4.467107 ACCGCCTCCCTCCTCCTC 62.467 72.222 0.00 0.00 0.00 3.71
46 47 4.787280 CACCGCCTCCCTCCTCCT 62.787 72.222 0.00 0.00 0.00 3.69
50 51 4.864334 CATGCACCGCCTCCCTCC 62.864 72.222 0.00 0.00 0.00 4.30
51 52 3.746949 CTCATGCACCGCCTCCCTC 62.747 68.421 0.00 0.00 0.00 4.30
52 53 3.790437 CTCATGCACCGCCTCCCT 61.790 66.667 0.00 0.00 0.00 4.20
53 54 4.864334 CCTCATGCACCGCCTCCC 62.864 72.222 0.00 0.00 0.00 4.30
54 55 4.864334 CCCTCATGCACCGCCTCC 62.864 72.222 0.00 0.00 0.00 4.30
79 80 2.758089 GCAAGAGGAGCACGGCATG 61.758 63.158 0.00 0.00 0.00 4.06
80 81 2.437359 GCAAGAGGAGCACGGCAT 60.437 61.111 0.00 0.00 0.00 4.40
81 82 3.630013 AGCAAGAGGAGCACGGCA 61.630 61.111 0.00 0.00 0.00 5.69
82 83 3.123620 CAGCAAGAGGAGCACGGC 61.124 66.667 0.00 0.00 0.00 5.68
83 84 1.447489 CTCAGCAAGAGGAGCACGG 60.447 63.158 0.00 0.00 40.84 4.94
84 85 4.182132 CTCAGCAAGAGGAGCACG 57.818 61.111 0.00 0.00 40.84 5.34
97 98 4.869440 CGCCCTCTCGCTGCTCAG 62.869 72.222 0.00 0.00 0.00 3.35
113 114 4.089757 TCCTTCCCCTCCTCCCCG 62.090 72.222 0.00 0.00 0.00 5.73
114 115 2.040359 CTCCTTCCCCTCCTCCCC 60.040 72.222 0.00 0.00 0.00 4.81
115 116 2.770475 GCTCCTTCCCCTCCTCCC 60.770 72.222 0.00 0.00 0.00 4.30
116 117 3.157949 CGCTCCTTCCCCTCCTCC 61.158 72.222 0.00 0.00 0.00 4.30
117 118 2.042843 TCGCTCCTTCCCCTCCTC 60.043 66.667 0.00 0.00 0.00 3.71
118 119 2.364448 GTCGCTCCTTCCCCTCCT 60.364 66.667 0.00 0.00 0.00 3.69
119 120 3.839432 CGTCGCTCCTTCCCCTCC 61.839 72.222 0.00 0.00 0.00 4.30
120 121 3.839432 CCGTCGCTCCTTCCCCTC 61.839 72.222 0.00 0.00 0.00 4.30
124 125 4.856607 CTCGCCGTCGCTCCTTCC 62.857 72.222 0.00 0.00 35.26 3.46
125 126 4.117661 ACTCGCCGTCGCTCCTTC 62.118 66.667 0.00 0.00 35.26 3.46
126 127 4.421479 CACTCGCCGTCGCTCCTT 62.421 66.667 0.00 0.00 35.26 3.36
139 140 4.408821 TCGCCACCATGCCCACTC 62.409 66.667 0.00 0.00 0.00 3.51
140 141 4.722700 GTCGCCACCATGCCCACT 62.723 66.667 0.00 0.00 0.00 4.00
175 176 4.814294 ATTCTCCACGTCGCCGCC 62.814 66.667 0.00 0.00 37.70 6.13
176 177 3.554692 CATTCTCCACGTCGCCGC 61.555 66.667 0.00 0.00 37.70 6.53
177 178 2.885644 CCATTCTCCACGTCGCCG 60.886 66.667 0.00 0.00 40.83 6.46
178 179 2.511600 CCCATTCTCCACGTCGCC 60.512 66.667 0.00 0.00 0.00 5.54
179 180 2.292794 TAGCCCATTCTCCACGTCGC 62.293 60.000 0.00 0.00 0.00 5.19
180 181 0.249073 CTAGCCCATTCTCCACGTCG 60.249 60.000 0.00 0.00 0.00 5.12
181 182 0.105039 CCTAGCCCATTCTCCACGTC 59.895 60.000 0.00 0.00 0.00 4.34
182 183 1.338136 CCCTAGCCCATTCTCCACGT 61.338 60.000 0.00 0.00 0.00 4.49
183 184 1.338136 ACCCTAGCCCATTCTCCACG 61.338 60.000 0.00 0.00 0.00 4.94
184 185 0.919710 AACCCTAGCCCATTCTCCAC 59.080 55.000 0.00 0.00 0.00 4.02
185 186 2.408565 CTAACCCTAGCCCATTCTCCA 58.591 52.381 0.00 0.00 0.00 3.86
186 187 1.700186 CCTAACCCTAGCCCATTCTCC 59.300 57.143 0.00 0.00 0.00 3.71
187 188 1.700186 CCCTAACCCTAGCCCATTCTC 59.300 57.143 0.00 0.00 0.00 2.87
188 189 1.699257 CCCCTAACCCTAGCCCATTCT 60.699 57.143 0.00 0.00 0.00 2.40
189 190 0.771755 CCCCTAACCCTAGCCCATTC 59.228 60.000 0.00 0.00 0.00 2.67
190 191 0.349091 TCCCCTAACCCTAGCCCATT 59.651 55.000 0.00 0.00 0.00 3.16
191 192 0.349091 TTCCCCTAACCCTAGCCCAT 59.651 55.000 0.00 0.00 0.00 4.00
192 193 0.349091 ATTCCCCTAACCCTAGCCCA 59.651 55.000 0.00 0.00 0.00 5.36
193 194 0.771755 CATTCCCCTAACCCTAGCCC 59.228 60.000 0.00 0.00 0.00 5.19
194 195 1.700186 CTCATTCCCCTAACCCTAGCC 59.300 57.143 0.00 0.00 0.00 3.93
195 196 1.700186 CCTCATTCCCCTAACCCTAGC 59.300 57.143 0.00 0.00 0.00 3.42
196 197 3.243724 CTCCTCATTCCCCTAACCCTAG 58.756 54.545 0.00 0.00 0.00 3.02
197 198 2.696158 GCTCCTCATTCCCCTAACCCTA 60.696 54.545 0.00 0.00 0.00 3.53
198 199 1.977202 GCTCCTCATTCCCCTAACCCT 60.977 57.143 0.00 0.00 0.00 4.34
199 200 0.474614 GCTCCTCATTCCCCTAACCC 59.525 60.000 0.00 0.00 0.00 4.11
200 201 0.106894 CGCTCCTCATTCCCCTAACC 59.893 60.000 0.00 0.00 0.00 2.85
201 202 0.106894 CCGCTCCTCATTCCCCTAAC 59.893 60.000 0.00 0.00 0.00 2.34
202 203 1.054406 CCCGCTCCTCATTCCCCTAA 61.054 60.000 0.00 0.00 0.00 2.69
203 204 1.459539 CCCGCTCCTCATTCCCCTA 60.460 63.158 0.00 0.00 0.00 3.53
204 205 2.770048 CCCGCTCCTCATTCCCCT 60.770 66.667 0.00 0.00 0.00 4.79
205 206 3.878667 CCCCGCTCCTCATTCCCC 61.879 72.222 0.00 0.00 0.00 4.81
206 207 3.878667 CCCCCGCTCCTCATTCCC 61.879 72.222 0.00 0.00 0.00 3.97
220 221 1.127343 CTCATCTCCTCACTTCCCCC 58.873 60.000 0.00 0.00 0.00 5.40
221 222 1.127343 CCTCATCTCCTCACTTCCCC 58.873 60.000 0.00 0.00 0.00 4.81
222 223 2.038659 CTCCTCATCTCCTCACTTCCC 58.961 57.143 0.00 0.00 0.00 3.97
223 224 2.958355 CTCTCCTCATCTCCTCACTTCC 59.042 54.545 0.00 0.00 0.00 3.46
224 225 2.958355 CCTCTCCTCATCTCCTCACTTC 59.042 54.545 0.00 0.00 0.00 3.01
225 226 2.584965 TCCTCTCCTCATCTCCTCACTT 59.415 50.000 0.00 0.00 0.00 3.16
226 227 2.091885 GTCCTCTCCTCATCTCCTCACT 60.092 54.545 0.00 0.00 0.00 3.41
227 228 2.306847 GTCCTCTCCTCATCTCCTCAC 58.693 57.143 0.00 0.00 0.00 3.51
228 229 1.133945 CGTCCTCTCCTCATCTCCTCA 60.134 57.143 0.00 0.00 0.00 3.86
229 230 1.142060 TCGTCCTCTCCTCATCTCCTC 59.858 57.143 0.00 0.00 0.00 3.71
230 231 1.133915 GTCGTCCTCTCCTCATCTCCT 60.134 57.143 0.00 0.00 0.00 3.69
231 232 1.314730 GTCGTCCTCTCCTCATCTCC 58.685 60.000 0.00 0.00 0.00 3.71
232 233 0.941542 CGTCGTCCTCTCCTCATCTC 59.058 60.000 0.00 0.00 0.00 2.75
233 234 1.098712 GCGTCGTCCTCTCCTCATCT 61.099 60.000 0.00 0.00 0.00 2.90
234 235 1.098712 AGCGTCGTCCTCTCCTCATC 61.099 60.000 0.00 0.00 0.00 2.92
235 236 1.077357 AGCGTCGTCCTCTCCTCAT 60.077 57.895 0.00 0.00 0.00 2.90
236 237 2.041115 CAGCGTCGTCCTCTCCTCA 61.041 63.158 0.00 0.00 0.00 3.86
237 238 1.984321 GACAGCGTCGTCCTCTCCTC 61.984 65.000 0.00 0.00 0.00 3.71
238 239 2.034376 ACAGCGTCGTCCTCTCCT 59.966 61.111 0.00 0.00 0.00 3.69
239 240 2.486042 GACAGCGTCGTCCTCTCC 59.514 66.667 0.00 0.00 0.00 3.71
252 253 3.592814 TCGATAGGGCGCCGACAG 61.593 66.667 22.54 10.79 0.00 3.51
259 260 3.303928 GAGGGGGTCGATAGGGCG 61.304 72.222 0.00 0.00 0.00 6.13
260 261 1.909287 GAGAGGGGGTCGATAGGGC 60.909 68.421 0.00 0.00 0.00 5.19
261 262 1.228925 GGAGAGGGGGTCGATAGGG 60.229 68.421 0.00 0.00 0.00 3.53
262 263 0.540830 CAGGAGAGGGGGTCGATAGG 60.541 65.000 0.00 0.00 0.00 2.57
263 264 0.186386 ACAGGAGAGGGGGTCGATAG 59.814 60.000 0.00 0.00 0.00 2.08
264 265 0.106167 CACAGGAGAGGGGGTCGATA 60.106 60.000 0.00 0.00 0.00 2.92
265 266 1.381872 CACAGGAGAGGGGGTCGAT 60.382 63.158 0.00 0.00 0.00 3.59
266 267 1.875422 ATCACAGGAGAGGGGGTCGA 61.875 60.000 0.00 0.00 0.00 4.20
267 268 1.381872 ATCACAGGAGAGGGGGTCG 60.382 63.158 0.00 0.00 0.00 4.79
268 269 1.977293 GCATCACAGGAGAGGGGGTC 61.977 65.000 0.00 0.00 0.00 4.46
269 270 1.997874 GCATCACAGGAGAGGGGGT 60.998 63.158 0.00 0.00 0.00 4.95
270 271 2.914289 GCATCACAGGAGAGGGGG 59.086 66.667 0.00 0.00 0.00 5.40
271 272 1.617018 TTCGCATCACAGGAGAGGGG 61.617 60.000 0.00 0.00 34.14 4.79
272 273 0.250234 TTTCGCATCACAGGAGAGGG 59.750 55.000 0.00 0.00 0.00 4.30
273 274 2.005451 CTTTTCGCATCACAGGAGAGG 58.995 52.381 0.00 0.00 0.00 3.69
274 275 2.670414 GTCTTTTCGCATCACAGGAGAG 59.330 50.000 0.00 0.00 0.00 3.20
275 276 2.688507 GTCTTTTCGCATCACAGGAGA 58.311 47.619 0.00 0.00 0.00 3.71
276 277 1.391485 CGTCTTTTCGCATCACAGGAG 59.609 52.381 0.00 0.00 0.00 3.69
277 278 1.000394 TCGTCTTTTCGCATCACAGGA 60.000 47.619 0.00 0.00 0.00 3.86
278 279 1.391485 CTCGTCTTTTCGCATCACAGG 59.609 52.381 0.00 0.00 0.00 4.00
279 280 2.328473 TCTCGTCTTTTCGCATCACAG 58.672 47.619 0.00 0.00 0.00 3.66
280 281 2.432206 TCTCGTCTTTTCGCATCACA 57.568 45.000 0.00 0.00 0.00 3.58
281 282 3.999229 ATTCTCGTCTTTTCGCATCAC 57.001 42.857 0.00 0.00 0.00 3.06
282 283 3.863424 GGTATTCTCGTCTTTTCGCATCA 59.137 43.478 0.00 0.00 0.00 3.07
283 284 3.245519 GGGTATTCTCGTCTTTTCGCATC 59.754 47.826 0.00 0.00 0.00 3.91
284 285 3.118738 AGGGTATTCTCGTCTTTTCGCAT 60.119 43.478 0.00 0.00 0.00 4.73
285 286 2.232941 AGGGTATTCTCGTCTTTTCGCA 59.767 45.455 0.00 0.00 0.00 5.10
286 287 2.858941 GAGGGTATTCTCGTCTTTTCGC 59.141 50.000 0.00 0.00 0.00 4.70
304 305 1.987807 AATCTCATGCCCCACCGAGG 61.988 60.000 0.00 0.00 37.03 4.63
305 306 0.107017 AAATCTCATGCCCCACCGAG 60.107 55.000 0.00 0.00 0.00 4.63
306 307 1.134220 GTAAATCTCATGCCCCACCGA 60.134 52.381 0.00 0.00 0.00 4.69
307 308 1.308998 GTAAATCTCATGCCCCACCG 58.691 55.000 0.00 0.00 0.00 4.94
308 309 2.301346 CTGTAAATCTCATGCCCCACC 58.699 52.381 0.00 0.00 0.00 4.61
309 310 2.301346 CCTGTAAATCTCATGCCCCAC 58.699 52.381 0.00 0.00 0.00 4.61
310 311 1.410083 GCCTGTAAATCTCATGCCCCA 60.410 52.381 0.00 0.00 0.00 4.96
311 312 1.322442 GCCTGTAAATCTCATGCCCC 58.678 55.000 0.00 0.00 0.00 5.80
312 313 0.947244 CGCCTGTAAATCTCATGCCC 59.053 55.000 0.00 0.00 0.00 5.36
313 314 0.947244 CCGCCTGTAAATCTCATGCC 59.053 55.000 0.00 0.00 0.00 4.40
314 315 1.331756 CACCGCCTGTAAATCTCATGC 59.668 52.381 0.00 0.00 0.00 4.06
315 316 1.942657 CCACCGCCTGTAAATCTCATG 59.057 52.381 0.00 0.00 0.00 3.07
316 317 1.747206 GCCACCGCCTGTAAATCTCAT 60.747 52.381 0.00 0.00 0.00 2.90
317 318 0.392461 GCCACCGCCTGTAAATCTCA 60.392 55.000 0.00 0.00 0.00 3.27
318 319 0.392461 TGCCACCGCCTGTAAATCTC 60.392 55.000 0.00 0.00 0.00 2.75
319 320 0.676782 GTGCCACCGCCTGTAAATCT 60.677 55.000 0.00 0.00 0.00 2.40
320 321 1.654023 GGTGCCACCGCCTGTAAATC 61.654 60.000 0.00 0.00 38.62 2.17
321 322 1.677633 GGTGCCACCGCCTGTAAAT 60.678 57.895 0.00 0.00 38.62 1.40
322 323 2.281900 GGTGCCACCGCCTGTAAA 60.282 61.111 0.00 0.00 38.62 2.01
323 324 3.561241 TGGTGCCACCGCCTGTAA 61.561 61.111 9.78 0.00 42.58 2.41
324 325 4.323477 GTGGTGCCACCGCCTGTA 62.323 66.667 16.73 0.00 42.80 2.74
330 331 2.826287 TGTTGTGTGGTGCCACCG 60.826 61.111 17.65 0.00 45.63 4.94
331 332 1.752694 ACTGTTGTGTGGTGCCACC 60.753 57.895 17.65 7.01 45.63 4.61
332 333 1.433064 CACTGTTGTGTGGTGCCAC 59.567 57.895 14.04 14.04 46.33 5.01
333 334 3.917058 CACTGTTGTGTGGTGCCA 58.083 55.556 0.00 0.00 39.24 4.92
341 342 7.416901 TCGGATCGAACAAAACACTGTTGTG 62.417 44.000 10.15 10.15 39.63 3.33
342 343 3.242608 CGGATCGAACAAAACACTGTTGT 60.243 43.478 0.00 0.00 39.63 3.32
343 344 3.001838 TCGGATCGAACAAAACACTGTTG 59.998 43.478 0.00 0.00 39.63 3.33
344 345 3.001939 GTCGGATCGAACAAAACACTGTT 59.998 43.478 0.00 0.00 42.23 3.16
345 346 2.542595 GTCGGATCGAACAAAACACTGT 59.457 45.455 0.00 0.00 37.72 3.55
346 347 2.409752 CGTCGGATCGAACAAAACACTG 60.410 50.000 0.00 0.00 37.72 3.66
347 348 1.790623 CGTCGGATCGAACAAAACACT 59.209 47.619 0.00 0.00 37.72 3.55
348 349 1.136446 CCGTCGGATCGAACAAAACAC 60.136 52.381 4.91 0.00 37.72 3.32
349 350 1.141645 CCGTCGGATCGAACAAAACA 58.858 50.000 4.91 0.00 37.72 2.83
350 351 0.441145 CCCGTCGGATCGAACAAAAC 59.559 55.000 14.39 0.00 37.72 2.43
351 352 1.293267 GCCCGTCGGATCGAACAAAA 61.293 55.000 14.39 0.00 37.72 2.44
352 353 1.738830 GCCCGTCGGATCGAACAAA 60.739 57.895 14.39 0.00 37.72 2.83
353 354 2.125832 GCCCGTCGGATCGAACAA 60.126 61.111 14.39 0.00 37.72 2.83
354 355 4.485834 CGCCCGTCGGATCGAACA 62.486 66.667 14.39 0.00 37.72 3.18
367 368 3.928779 TCTGCATCGATCCCGCCC 61.929 66.667 0.00 0.00 35.37 6.13
368 369 2.663188 GTCTGCATCGATCCCGCC 60.663 66.667 0.00 0.00 35.37 6.13
369 370 2.954020 TTCGTCTGCATCGATCCCGC 62.954 60.000 13.34 0.00 37.18 6.13
370 371 0.936764 CTTCGTCTGCATCGATCCCG 60.937 60.000 13.34 0.00 37.18 5.14
371 372 0.385751 TCTTCGTCTGCATCGATCCC 59.614 55.000 13.34 0.00 37.18 3.85
372 373 2.323959 GATCTTCGTCTGCATCGATCC 58.676 52.381 13.34 0.00 37.18 3.36
373 374 2.323959 GGATCTTCGTCTGCATCGATC 58.676 52.381 13.34 9.06 37.18 3.69
374 375 1.335415 CGGATCTTCGTCTGCATCGAT 60.335 52.381 13.34 0.00 37.18 3.59
375 376 0.029433 CGGATCTTCGTCTGCATCGA 59.971 55.000 9.50 9.50 35.50 3.59
376 377 0.029433 TCGGATCTTCGTCTGCATCG 59.971 55.000 5.29 5.29 0.00 3.84
377 378 1.482278 GTCGGATCTTCGTCTGCATC 58.518 55.000 0.00 0.00 0.00 3.91
378 379 0.248661 CGTCGGATCTTCGTCTGCAT 60.249 55.000 0.00 0.00 0.00 3.96
379 380 1.136774 CGTCGGATCTTCGTCTGCA 59.863 57.895 0.00 0.00 0.00 4.41
380 381 1.586564 CCGTCGGATCTTCGTCTGC 60.587 63.158 4.91 0.00 0.00 4.26
381 382 1.586564 GCCGTCGGATCTTCGTCTG 60.587 63.158 17.49 0.00 0.00 3.51
382 383 2.772691 GGCCGTCGGATCTTCGTCT 61.773 63.158 17.49 0.00 0.00 4.18
383 384 2.278661 GGCCGTCGGATCTTCGTC 60.279 66.667 17.49 0.00 0.00 4.20
384 385 3.064987 CTGGCCGTCGGATCTTCGT 62.065 63.158 17.49 0.00 0.00 3.85
385 386 2.278857 CTGGCCGTCGGATCTTCG 60.279 66.667 17.49 0.00 0.00 3.79
386 387 1.749334 ATCCTGGCCGTCGGATCTTC 61.749 60.000 17.49 0.00 35.08 2.87
387 388 1.762460 ATCCTGGCCGTCGGATCTT 60.762 57.895 17.49 0.00 35.08 2.40
388 389 2.123251 ATCCTGGCCGTCGGATCT 60.123 61.111 17.49 0.00 35.08 2.75
389 390 2.340443 GATCCTGGCCGTCGGATC 59.660 66.667 24.24 24.24 46.22 3.36
390 391 3.606662 CGATCCTGGCCGTCGGAT 61.607 66.667 17.49 17.95 42.55 4.18
393 394 4.933064 GAGCGATCCTGGCCGTCG 62.933 72.222 13.27 13.27 38.34 5.12
394 395 3.532155 AGAGCGATCCTGGCCGTC 61.532 66.667 0.00 0.00 0.00 4.79
395 396 3.842923 CAGAGCGATCCTGGCCGT 61.843 66.667 0.00 0.00 0.00 5.68
396 397 4.598894 CCAGAGCGATCCTGGCCG 62.599 72.222 0.00 4.35 43.93 6.13
400 401 0.173481 TTTCGTCCAGAGCGATCCTG 59.827 55.000 0.00 0.00 38.21 3.86
401 402 0.895530 TTTTCGTCCAGAGCGATCCT 59.104 50.000 0.00 0.00 38.21 3.24
402 403 1.861575 GATTTTCGTCCAGAGCGATCC 59.138 52.381 0.00 0.00 38.21 3.36
403 404 1.861575 GGATTTTCGTCCAGAGCGATC 59.138 52.381 0.00 0.00 38.21 3.69
404 405 1.802880 CGGATTTTCGTCCAGAGCGAT 60.803 52.381 0.00 0.00 38.21 4.58
405 406 0.457853 CGGATTTTCGTCCAGAGCGA 60.458 55.000 0.00 0.00 38.21 4.93
406 407 0.457853 TCGGATTTTCGTCCAGAGCG 60.458 55.000 0.00 0.00 38.21 5.03
407 408 1.000145 GTCGGATTTTCGTCCAGAGC 59.000 55.000 0.00 0.00 38.21 4.09
408 409 1.269166 CGTCGGATTTTCGTCCAGAG 58.731 55.000 0.00 0.00 38.21 3.35
409 410 0.108992 CCGTCGGATTTTCGTCCAGA 60.109 55.000 4.91 0.00 38.21 3.86
410 411 1.693083 GCCGTCGGATTTTCGTCCAG 61.693 60.000 17.49 0.00 38.21 3.86
411 412 1.738830 GCCGTCGGATTTTCGTCCA 60.739 57.895 17.49 0.00 38.21 4.02
412 413 2.458610 GGCCGTCGGATTTTCGTCC 61.459 63.158 17.49 0.00 34.82 4.79
413 414 2.458610 GGGCCGTCGGATTTTCGTC 61.459 63.158 17.49 0.00 0.00 4.20
414 415 2.435410 GGGCCGTCGGATTTTCGT 60.435 61.111 17.49 0.00 0.00 3.85
415 416 3.199891 GGGGCCGTCGGATTTTCG 61.200 66.667 17.49 0.00 0.00 3.46
416 417 2.935627 ATCGGGGCCGTCGGATTTTC 62.936 60.000 17.49 0.00 40.74 2.29
417 418 2.935627 GATCGGGGCCGTCGGATTTT 62.936 60.000 17.49 0.00 40.74 1.82
418 419 3.456105 GATCGGGGCCGTCGGATTT 62.456 63.158 17.49 0.00 40.74 2.17
419 420 3.925090 GATCGGGGCCGTCGGATT 61.925 66.667 17.49 3.34 40.74 3.01
423 424 3.659089 AAACTGATCGGGGCCGTCG 62.659 63.158 6.47 10.39 40.74 5.12
424 425 2.106683 CAAACTGATCGGGGCCGTC 61.107 63.158 6.47 0.00 40.74 4.79
425 426 2.046314 CAAACTGATCGGGGCCGT 60.046 61.111 6.47 0.00 40.74 5.68
426 427 2.813226 TTCCAAACTGATCGGGGCCG 62.813 60.000 6.47 0.00 41.35 6.13
427 428 0.610785 TTTCCAAACTGATCGGGGCC 60.611 55.000 6.47 0.00 0.00 5.80
428 429 0.811281 CTTTCCAAACTGATCGGGGC 59.189 55.000 6.47 0.00 0.00 5.80
429 430 0.811281 GCTTTCCAAACTGATCGGGG 59.189 55.000 6.47 0.00 0.00 5.73
430 431 1.826385 AGCTTTCCAAACTGATCGGG 58.174 50.000 6.47 0.00 0.00 5.14
431 432 4.035675 GGATTAGCTTTCCAAACTGATCGG 59.964 45.833 9.85 0.00 33.21 4.18
432 433 4.260375 CGGATTAGCTTTCCAAACTGATCG 60.260 45.833 13.95 0.00 32.45 3.69
433 434 4.876107 TCGGATTAGCTTTCCAAACTGATC 59.124 41.667 13.95 0.00 32.45 2.92
434 435 4.636206 GTCGGATTAGCTTTCCAAACTGAT 59.364 41.667 13.95 0.00 32.45 2.90
435 436 4.000988 GTCGGATTAGCTTTCCAAACTGA 58.999 43.478 13.95 0.00 32.45 3.41
436 437 3.181520 CGTCGGATTAGCTTTCCAAACTG 60.182 47.826 13.95 0.00 32.45 3.16
437 438 3.000727 CGTCGGATTAGCTTTCCAAACT 58.999 45.455 13.95 0.00 32.45 2.66
438 439 2.095372 CCGTCGGATTAGCTTTCCAAAC 59.905 50.000 4.91 10.37 32.45 2.93
439 440 2.352388 CCGTCGGATTAGCTTTCCAAA 58.648 47.619 4.91 1.21 32.45 3.28
440 441 2.010043 GCCGTCGGATTAGCTTTCCAA 61.010 52.381 17.49 0.00 32.45 3.53
441 442 0.461339 GCCGTCGGATTAGCTTTCCA 60.461 55.000 17.49 1.43 32.45 3.53
442 443 0.179081 AGCCGTCGGATTAGCTTTCC 60.179 55.000 17.49 0.00 29.27 3.13
443 444 0.931005 CAGCCGTCGGATTAGCTTTC 59.069 55.000 17.49 0.00 31.93 2.62
444 445 0.535335 TCAGCCGTCGGATTAGCTTT 59.465 50.000 17.49 0.00 31.93 3.51
445 446 0.535335 TTCAGCCGTCGGATTAGCTT 59.465 50.000 17.49 0.00 31.93 3.74
446 447 0.535335 TTTCAGCCGTCGGATTAGCT 59.465 50.000 17.49 0.47 35.52 3.32
447 448 1.365699 TTTTCAGCCGTCGGATTAGC 58.634 50.000 17.49 0.00 0.00 3.09
448 449 2.544267 GGATTTTCAGCCGTCGGATTAG 59.456 50.000 17.49 0.00 0.00 1.73
449 450 2.093394 TGGATTTTCAGCCGTCGGATTA 60.093 45.455 17.49 0.00 0.00 1.75
450 451 1.339631 TGGATTTTCAGCCGTCGGATT 60.340 47.619 17.49 0.00 0.00 3.01
451 452 0.251916 TGGATTTTCAGCCGTCGGAT 59.748 50.000 17.49 5.54 0.00 4.18
452 453 0.035598 TTGGATTTTCAGCCGTCGGA 59.964 50.000 17.49 0.00 0.00 4.55
453 454 0.878416 TTTGGATTTTCAGCCGTCGG 59.122 50.000 6.99 6.99 0.00 4.79
454 455 1.724654 CGTTTGGATTTTCAGCCGTCG 60.725 52.381 0.00 0.00 0.00 5.12
455 456 1.963747 CGTTTGGATTTTCAGCCGTC 58.036 50.000 0.00 0.00 0.00 4.79
456 457 0.039527 GCGTTTGGATTTTCAGCCGT 60.040 50.000 0.00 0.00 0.00 5.68
457 458 0.039617 TGCGTTTGGATTTTCAGCCG 60.040 50.000 0.00 0.00 0.00 5.52
458 459 1.418373 GTGCGTTTGGATTTTCAGCC 58.582 50.000 0.00 0.00 0.00 4.85
459 460 1.052287 CGTGCGTTTGGATTTTCAGC 58.948 50.000 0.00 0.00 0.00 4.26
460 461 1.665735 CCCGTGCGTTTGGATTTTCAG 60.666 52.381 0.00 0.00 0.00 3.02
461 462 0.312416 CCCGTGCGTTTGGATTTTCA 59.688 50.000 0.00 0.00 0.00 2.69
462 463 0.594110 TCCCGTGCGTTTGGATTTTC 59.406 50.000 0.00 0.00 0.00 2.29
463 464 0.596082 CTCCCGTGCGTTTGGATTTT 59.404 50.000 0.00 0.00 0.00 1.82
464 465 0.250553 TCTCCCGTGCGTTTGGATTT 60.251 50.000 0.00 0.00 0.00 2.17
465 466 0.673644 CTCTCCCGTGCGTTTGGATT 60.674 55.000 0.00 0.00 0.00 3.01
466 467 1.079127 CTCTCCCGTGCGTTTGGAT 60.079 57.895 0.00 0.00 0.00 3.41
467 468 2.342279 CTCTCCCGTGCGTTTGGA 59.658 61.111 0.00 0.00 0.00 3.53
468 469 3.423154 GCTCTCCCGTGCGTTTGG 61.423 66.667 0.00 0.00 0.00 3.28
469 470 2.357517 AGCTCTCCCGTGCGTTTG 60.358 61.111 0.00 0.00 34.94 2.93
470 471 2.048127 GAGCTCTCCCGTGCGTTT 60.048 61.111 6.43 0.00 34.94 3.60
471 472 4.070552 GGAGCTCTCCCGTGCGTT 62.071 66.667 14.64 0.00 43.94 4.84
480 481 2.026822 TCCAGACCAAAATGGAGCTCTC 60.027 50.000 14.64 4.40 40.96 3.20
481 482 1.988107 TCCAGACCAAAATGGAGCTCT 59.012 47.619 14.64 0.00 40.96 4.09
482 483 2.087646 GTCCAGACCAAAATGGAGCTC 58.912 52.381 4.71 4.71 46.09 4.09
483 484 1.707427 AGTCCAGACCAAAATGGAGCT 59.293 47.619 2.85 0.00 46.09 4.09
484 485 2.087646 GAGTCCAGACCAAAATGGAGC 58.912 52.381 2.85 0.00 46.09 4.70
485 486 3.710209 AGAGTCCAGACCAAAATGGAG 57.290 47.619 2.85 0.00 46.09 3.86
486 487 4.349636 TGTTAGAGTCCAGACCAAAATGGA 59.650 41.667 2.85 0.00 40.96 3.41
487 488 4.651778 TGTTAGAGTCCAGACCAAAATGG 58.348 43.478 0.00 0.00 45.02 3.16
488 489 5.182001 CCTTGTTAGAGTCCAGACCAAAATG 59.818 44.000 0.00 0.00 0.00 2.32
489 490 5.316987 CCTTGTTAGAGTCCAGACCAAAAT 58.683 41.667 0.00 0.00 0.00 1.82
490 491 4.445735 CCCTTGTTAGAGTCCAGACCAAAA 60.446 45.833 0.00 0.00 0.00 2.44
491 492 3.072476 CCCTTGTTAGAGTCCAGACCAAA 59.928 47.826 0.00 0.00 0.00 3.28
492 493 2.637872 CCCTTGTTAGAGTCCAGACCAA 59.362 50.000 0.00 0.00 0.00 3.67
493 494 2.257207 CCCTTGTTAGAGTCCAGACCA 58.743 52.381 0.00 0.00 0.00 4.02
494 495 1.555533 CCCCTTGTTAGAGTCCAGACC 59.444 57.143 0.00 0.00 0.00 3.85
495 496 2.537143 TCCCCTTGTTAGAGTCCAGAC 58.463 52.381 0.00 0.00 0.00 3.51
496 497 3.107601 CATCCCCTTGTTAGAGTCCAGA 58.892 50.000 0.00 0.00 0.00 3.86
497 498 2.171448 CCATCCCCTTGTTAGAGTCCAG 59.829 54.545 0.00 0.00 0.00 3.86
498 499 2.196595 CCATCCCCTTGTTAGAGTCCA 58.803 52.381 0.00 0.00 0.00 4.02
499 500 1.134068 GCCATCCCCTTGTTAGAGTCC 60.134 57.143 0.00 0.00 0.00 3.85
500 501 1.134068 GGCCATCCCCTTGTTAGAGTC 60.134 57.143 0.00 0.00 0.00 3.36
501 502 0.919710 GGCCATCCCCTTGTTAGAGT 59.080 55.000 0.00 0.00 0.00 3.24
502 503 0.918983 TGGCCATCCCCTTGTTAGAG 59.081 55.000 0.00 0.00 0.00 2.43
503 504 1.284785 CTTGGCCATCCCCTTGTTAGA 59.715 52.381 6.09 0.00 0.00 2.10
504 505 1.005924 ACTTGGCCATCCCCTTGTTAG 59.994 52.381 6.09 0.00 0.00 2.34
505 506 1.080638 ACTTGGCCATCCCCTTGTTA 58.919 50.000 6.09 0.00 0.00 2.41
506 507 0.542702 CACTTGGCCATCCCCTTGTT 60.543 55.000 6.09 0.00 0.00 2.83
507 508 1.077265 CACTTGGCCATCCCCTTGT 59.923 57.895 6.09 0.00 0.00 3.16
508 509 2.353610 GCACTTGGCCATCCCCTTG 61.354 63.158 6.09 0.00 36.11 3.61
509 510 2.037847 GCACTTGGCCATCCCCTT 59.962 61.111 6.09 0.00 36.11 3.95
510 511 4.431131 CGCACTTGGCCATCCCCT 62.431 66.667 6.09 0.00 40.31 4.79
531 532 4.303603 CATGCAATCGAGCGCGGG 62.304 66.667 10.69 0.00 38.28 6.13
532 533 4.303603 CCATGCAATCGAGCGCGG 62.304 66.667 10.69 0.00 38.28 6.46
546 547 0.107508 CGTGGGTTGCAGATCTCCAT 60.108 55.000 3.59 0.00 0.00 3.41
592 593 8.251026 TGCTTAGATAACAGGGTTATATCGATG 58.749 37.037 8.54 0.00 32.55 3.84
611 612 1.267533 TGCTGAACGTACGTGCTTAGA 59.732 47.619 26.13 5.96 0.00 2.10
627 631 3.374220 TTGTCAATGGCTCTTTTGCTG 57.626 42.857 0.00 0.00 0.00 4.41
633 637 2.028748 GTGGCAATTGTCAATGGCTCTT 60.029 45.455 21.64 0.00 42.17 2.85
635 639 1.547372 AGTGGCAATTGTCAATGGCTC 59.453 47.619 21.64 15.46 42.17 4.70
763 771 0.519077 GGTACTCAGTTGCAGCTTGC 59.481 55.000 0.00 1.70 45.29 4.01
764 772 2.175878 AGGTACTCAGTTGCAGCTTG 57.824 50.000 0.00 0.00 0.00 4.01
765 773 2.354203 GCTAGGTACTCAGTTGCAGCTT 60.354 50.000 0.00 0.00 41.75 3.74
767 775 1.205893 AGCTAGGTACTCAGTTGCAGC 59.794 52.381 0.00 0.00 41.75 5.25
769 777 2.808919 AGAGCTAGGTACTCAGTTGCA 58.191 47.619 0.00 0.00 41.75 4.08
770 778 3.193691 TGAAGAGCTAGGTACTCAGTTGC 59.806 47.826 0.00 0.00 41.75 4.17
771 779 4.673061 CGTGAAGAGCTAGGTACTCAGTTG 60.673 50.000 0.00 0.00 41.75 3.16
772 780 3.440872 CGTGAAGAGCTAGGTACTCAGTT 59.559 47.826 0.00 0.00 41.75 3.16
773 781 3.011119 CGTGAAGAGCTAGGTACTCAGT 58.989 50.000 0.00 0.00 41.75 3.41
774 782 3.011119 ACGTGAAGAGCTAGGTACTCAG 58.989 50.000 0.00 0.00 41.75 3.35
775 783 2.747989 CACGTGAAGAGCTAGGTACTCA 59.252 50.000 10.90 0.00 41.75 3.41
776 784 2.748532 ACACGTGAAGAGCTAGGTACTC 59.251 50.000 25.01 0.00 41.75 2.59
777 785 2.792878 ACACGTGAAGAGCTAGGTACT 58.207 47.619 25.01 0.00 46.37 2.73
778 786 3.438087 TGTACACGTGAAGAGCTAGGTAC 59.562 47.826 25.01 10.40 0.00 3.34
779 787 3.678289 TGTACACGTGAAGAGCTAGGTA 58.322 45.455 25.01 0.00 0.00 3.08
780 788 2.488545 CTGTACACGTGAAGAGCTAGGT 59.511 50.000 25.01 0.00 0.00 3.08
781 789 2.488545 ACTGTACACGTGAAGAGCTAGG 59.511 50.000 25.01 4.69 0.00 3.02
834 844 0.960364 GTTCCCGATTTCAGCTGCCA 60.960 55.000 9.47 0.00 0.00 4.92
836 846 1.803289 GGTTCCCGATTTCAGCTGC 59.197 57.895 9.47 0.00 0.00 5.25
837 847 4.929353 TAGCGGTTCCCGATTTCAGCTG 62.929 54.545 7.63 7.63 45.97 4.24
838 848 2.185310 AGCGGTTCCCGATTTCAGCT 62.185 55.000 6.89 0.00 45.97 4.24
839 849 0.461339 TAGCGGTTCCCGATTTCAGC 60.461 55.000 6.89 0.00 45.97 4.26
841 851 1.537348 CGATAGCGGTTCCCGATTTCA 60.537 52.381 6.89 0.00 45.97 2.69
842 852 1.137513 CGATAGCGGTTCCCGATTTC 58.862 55.000 6.89 4.11 45.97 2.17
895 930 6.016108 GCCTCTAGGTATTACAAGTAGTCAGG 60.016 46.154 0.00 0.00 37.57 3.86
896 931 6.546403 TGCCTCTAGGTATTACAAGTAGTCAG 59.454 42.308 0.00 0.00 37.57 3.51
898 933 6.956202 TGCCTCTAGGTATTACAAGTAGTC 57.044 41.667 0.00 0.00 37.57 2.59
899 934 7.177041 GCTATGCCTCTAGGTATTACAAGTAGT 59.823 40.741 4.86 0.00 40.97 2.73
902 937 6.015010 CAGCTATGCCTCTAGGTATTACAAGT 60.015 42.308 4.86 0.00 40.97 3.16
903 938 6.209589 TCAGCTATGCCTCTAGGTATTACAAG 59.790 42.308 4.86 0.00 40.97 3.16
904 939 6.075315 TCAGCTATGCCTCTAGGTATTACAA 58.925 40.000 4.86 0.00 40.97 2.41
945 982 0.472471 TTCGGTGGAAGGTTGCTTCT 59.528 50.000 0.00 0.00 34.06 2.85
964 1015 2.740826 CAACCACGGCCGAATCGT 60.741 61.111 35.90 18.29 41.93 3.73
993 1050 0.464036 GGTACGCTCCCATGATCACA 59.536 55.000 0.00 0.00 0.00 3.58
1070 1127 1.253593 GGAGAAAAGCCAGGCCAAGG 61.254 60.000 8.22 7.88 0.00 3.61
1083 1140 2.048222 CAGAGCACGGCGGAGAAA 60.048 61.111 13.24 0.00 0.00 2.52
1340 1487 2.035312 ACCGCCAGTCGAGGTAGT 59.965 61.111 0.00 0.00 41.67 2.73
1452 1599 4.337177 TGGTTCCGCGCCATGGAA 62.337 61.111 18.40 10.74 43.07 3.53
1548 1695 2.046314 GCCCAGCGCCAGAACTTA 60.046 61.111 2.29 0.00 0.00 2.24
2192 2339 2.159819 GAAGTGGAGGCAGTCGCTCA 62.160 60.000 0.00 0.00 38.60 4.26
2264 2411 3.175240 CTCACTCGCGCTTCACGG 61.175 66.667 5.56 0.00 43.93 4.94
2267 2414 1.371758 GTGTCTCACTCGCGCTTCA 60.372 57.895 5.56 0.00 0.00 3.02
2290 2438 7.341805 AGTAAGCAATACCTCATCAGTTGATT 58.658 34.615 0.00 0.00 34.89 2.57
2291 2439 6.893583 AGTAAGCAATACCTCATCAGTTGAT 58.106 36.000 0.00 0.00 34.89 2.57
2301 2449 5.584649 TGCATGTGTAAGTAAGCAATACCTC 59.415 40.000 0.00 0.00 34.89 3.85
2302 2450 5.496556 TGCATGTGTAAGTAAGCAATACCT 58.503 37.500 0.00 0.00 34.89 3.08
2303 2451 5.811399 TGCATGTGTAAGTAAGCAATACC 57.189 39.130 0.00 0.00 34.89 2.73
2381 2545 1.212688 CACCATCCCAATCAGGTAGCA 59.787 52.381 0.00 0.00 34.66 3.49
2394 2560 3.329929 AACTAGTTTCGTCCACCATCC 57.670 47.619 1.12 0.00 0.00 3.51
2408 2580 4.062991 GACGACATGGTTTCCAAACTAGT 58.937 43.478 0.00 0.00 36.95 2.57
2414 2586 1.890876 CTGGACGACATGGTTTCCAA 58.109 50.000 11.34 0.00 37.69 3.53
2467 2641 9.725206 TCTCCCTTCTATAAAGTTAAGGTATGT 57.275 33.333 0.00 0.00 37.40 2.29
2517 2692 3.251571 GTTTGTGACTCCTAACTAGCGG 58.748 50.000 0.00 0.00 0.00 5.52
2542 2717 0.690762 GTGTGGAGGCTTGGTTAGGA 59.309 55.000 0.00 0.00 0.00 2.94
2593 2768 1.882623 GAGCTTTTGGAGGACAACCAG 59.117 52.381 0.00 0.00 39.19 4.00
2618 2793 3.365265 CTGCGGACTTGGGCCAAC 61.365 66.667 16.66 6.60 0.00 3.77
2685 2860 2.540515 GAATGCGAGGATCTTCGACAA 58.459 47.619 29.01 14.48 43.03 3.18
2868 3044 2.048597 CTCGCGGCAAGTGTGGTA 60.049 61.111 6.13 0.00 0.00 3.25
2927 3104 4.274705 TCAACATGTTACATGTGTGACCAC 59.725 41.667 28.49 0.00 42.19 4.16
2946 3123 2.798976 TTGCAAGACCAAGCATCAAC 57.201 45.000 0.00 0.00 40.94 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.