Multiple sequence alignment - TraesCS7B01G092300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G092300 chr7B 100.000 3091 0 0 1 3091 105831876 105828786 0.000000e+00 5709.0
1 TraesCS7B01G092300 chr7B 94.251 574 31 2 2519 3091 320241603 320242175 0.000000e+00 876.0
2 TraesCS7B01G092300 chr7B 94.513 565 30 1 2527 3091 105769780 105769217 0.000000e+00 870.0
3 TraesCS7B01G092300 chr7B 78.220 528 110 5 1455 1980 105559491 105558967 1.780000e-87 333.0
4 TraesCS7B01G092300 chr7B 82.836 268 44 2 2260 2526 588051561 588051295 3.980000e-59 239.0
5 TraesCS7B01G092300 chr7D 87.448 2175 178 50 21 2152 140734107 140731985 0.000000e+00 2416.0
6 TraesCS7B01G092300 chr7D 78.030 528 111 5 1455 1980 140327717 140327193 8.260000e-86 327.0
7 TraesCS7B01G092300 chr7D 82.222 270 28 7 2260 2527 590865393 590865644 6.710000e-52 215.0
8 TraesCS7B01G092300 chr7A 94.503 764 42 0 1413 2176 142643947 142643184 0.000000e+00 1179.0
9 TraesCS7B01G092300 chr7A 87.548 1044 80 21 288 1312 142645268 142644256 0.000000e+00 1162.0
10 TraesCS7B01G092300 chr7A 78.450 529 107 7 1455 1980 142158554 142158030 3.820000e-89 339.0
11 TraesCS7B01G092300 chr7A 88.603 272 21 4 1924 2191 142620955 142620690 3.850000e-84 322.0
12 TraesCS7B01G092300 chr7A 93.274 223 7 2 90 304 142645504 142645282 3.850000e-84 322.0
13 TraesCS7B01G092300 chr7A 97.222 72 2 0 21 92 142645814 142645743 4.190000e-24 122.0
14 TraesCS7B01G092300 chr1B 94.077 574 32 2 2519 3090 569771413 569770840 0.000000e+00 870.0
15 TraesCS7B01G092300 chr1B 94.366 568 30 2 2525 3090 569787088 569786521 0.000000e+00 870.0
16 TraesCS7B01G092300 chr2B 92.756 566 38 3 2527 3091 504743226 504742663 0.000000e+00 815.0
17 TraesCS7B01G092300 chr2B 92.403 566 40 3 2527 3091 154612304 154611741 0.000000e+00 804.0
18 TraesCS7B01G092300 chr2B 91.146 576 48 3 2517 3091 321035588 321035015 0.000000e+00 778.0
19 TraesCS7B01G092300 chr2B 90.476 42 3 1 1368 1408 524423853 524423812 2.000000e-03 54.7
20 TraesCS7B01G092300 chr3B 92.240 567 40 4 2527 3091 417555909 417556473 0.000000e+00 800.0
21 TraesCS7B01G092300 chr3B 90.909 44 3 1 1368 1410 44781983 44782026 1.200000e-04 58.4
22 TraesCS7B01G092300 chr5B 91.887 567 41 5 2527 3091 479288065 479288628 0.000000e+00 787.0
23 TraesCS7B01G092300 chr5B 91.111 45 3 1 1367 1410 109111150 109111194 3.330000e-05 60.2
24 TraesCS7B01G092300 chr6D 86.617 269 34 2 2260 2527 10735805 10736072 2.330000e-76 296.0
25 TraesCS7B01G092300 chr4B 87.398 246 31 0 2260 2505 660382992 660383237 1.810000e-72 283.0
26 TraesCS7B01G092300 chr2D 82.463 268 46 1 2260 2526 34013909 34013642 1.850000e-57 233.0
27 TraesCS7B01G092300 chrUn 75.451 277 65 3 2250 2525 162962468 162962742 6.950000e-27 132.0
28 TraesCS7B01G092300 chrUn 75.451 277 65 3 2250 2525 163021805 163022079 6.950000e-27 132.0
29 TraesCS7B01G092300 chrUn 75.451 277 64 4 2250 2525 163048876 163049149 6.950000e-27 132.0
30 TraesCS7B01G092300 chrUn 75.451 277 64 4 2250 2525 336303894 336304167 6.950000e-27 132.0
31 TraesCS7B01G092300 chrUn 75.655 267 63 2 2260 2525 372140210 372139945 6.950000e-27 132.0
32 TraesCS7B01G092300 chr3D 94.000 50 1 2 1367 1415 481523643 481523595 1.190000e-09 75.0
33 TraesCS7B01G092300 chr1D 89.583 48 4 1 1369 1415 475213652 475213699 3.330000e-05 60.2
34 TraesCS7B01G092300 chr1D 96.875 32 0 1 1 31 225393855 225393824 6.000000e-03 52.8
35 TraesCS7B01G092300 chr3A 100.000 31 0 0 1378 1408 647465789 647465759 1.200000e-04 58.4
36 TraesCS7B01G092300 chr3A 100.000 29 0 0 1382 1410 36483869 36483897 2.000000e-03 54.7
37 TraesCS7B01G092300 chr6A 90.909 44 1 3 1367 1408 511531305 511531347 4.310000e-04 56.5
38 TraesCS7B01G092300 chr1A 88.889 45 4 1 1367 1410 527949386 527949430 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G092300 chr7B 105828786 105831876 3090 True 5709.00 5709 100.00000 1 3091 1 chr7B.!!$R3 3090
1 TraesCS7B01G092300 chr7B 320241603 320242175 572 False 876.00 876 94.25100 2519 3091 1 chr7B.!!$F1 572
2 TraesCS7B01G092300 chr7B 105769217 105769780 563 True 870.00 870 94.51300 2527 3091 1 chr7B.!!$R2 564
3 TraesCS7B01G092300 chr7B 105558967 105559491 524 True 333.00 333 78.22000 1455 1980 1 chr7B.!!$R1 525
4 TraesCS7B01G092300 chr7D 140731985 140734107 2122 True 2416.00 2416 87.44800 21 2152 1 chr7D.!!$R2 2131
5 TraesCS7B01G092300 chr7D 140327193 140327717 524 True 327.00 327 78.03000 1455 1980 1 chr7D.!!$R1 525
6 TraesCS7B01G092300 chr7A 142643184 142645814 2630 True 696.25 1179 93.13675 21 2176 4 chr7A.!!$R3 2155
7 TraesCS7B01G092300 chr7A 142158030 142158554 524 True 339.00 339 78.45000 1455 1980 1 chr7A.!!$R1 525
8 TraesCS7B01G092300 chr1B 569770840 569771413 573 True 870.00 870 94.07700 2519 3090 1 chr1B.!!$R1 571
9 TraesCS7B01G092300 chr1B 569786521 569787088 567 True 870.00 870 94.36600 2525 3090 1 chr1B.!!$R2 565
10 TraesCS7B01G092300 chr2B 504742663 504743226 563 True 815.00 815 92.75600 2527 3091 1 chr2B.!!$R3 564
11 TraesCS7B01G092300 chr2B 154611741 154612304 563 True 804.00 804 92.40300 2527 3091 1 chr2B.!!$R1 564
12 TraesCS7B01G092300 chr2B 321035015 321035588 573 True 778.00 778 91.14600 2517 3091 1 chr2B.!!$R2 574
13 TraesCS7B01G092300 chr3B 417555909 417556473 564 False 800.00 800 92.24000 2527 3091 1 chr3B.!!$F2 564
14 TraesCS7B01G092300 chr5B 479288065 479288628 563 False 787.00 787 91.88700 2527 3091 1 chr5B.!!$F2 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
691 1009 0.038599 TCTACCGAGCACACAGGGTA 59.961 55.0 0.0 0.0 34.02 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2417 2999 0.107017 ATGCATAAGCCGAGTGCCTT 60.107 50.0 0.0 0.0 42.71 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.324991 GGTCGGCCCGTTGGAGTT 62.325 66.667 1.63 0.00 0.00 3.01
18 19 3.047877 GTCGGCCCGTTGGAGTTG 61.048 66.667 1.63 0.00 0.00 3.16
170 414 1.301322 GCAATCGCCTCCTAGCCTC 60.301 63.158 0.00 0.00 0.00 4.70
222 467 3.556306 ACACCACCGACCACCCTG 61.556 66.667 0.00 0.00 0.00 4.45
311 563 8.939929 TCAAATATCTCATTTGTCAGACTTGTC 58.060 33.333 1.31 0.00 39.36 3.18
312 564 7.531280 AATATCTCATTTGTCAGACTTGTCG 57.469 36.000 1.31 0.00 0.00 4.35
315 606 2.543848 TCATTTGTCAGACTTGTCGTGC 59.456 45.455 1.31 0.00 0.00 5.34
336 627 4.991153 CACTAGTGCTATCTCTGGTGAA 57.009 45.455 10.54 0.00 43.50 3.18
338 629 3.957497 ACTAGTGCTATCTCTGGTGAAGG 59.043 47.826 0.00 0.00 0.00 3.46
368 660 2.093447 GTGGGGATGAGAGACGATTTGT 60.093 50.000 0.00 0.00 0.00 2.83
409 702 9.530129 GTCAAGACGTCTAATTTGAAATGTTAG 57.470 33.333 20.39 0.00 31.98 2.34
410 703 8.227791 TCAAGACGTCTAATTTGAAATGTTAGC 58.772 33.333 20.39 0.00 0.00 3.09
411 704 6.762108 AGACGTCTAATTTGAAATGTTAGCG 58.238 36.000 18.46 3.19 34.40 4.26
412 705 6.588756 AGACGTCTAATTTGAAATGTTAGCGA 59.411 34.615 18.46 0.00 33.48 4.93
413 706 6.762108 ACGTCTAATTTGAAATGTTAGCGAG 58.238 36.000 15.21 5.09 33.48 5.03
414 707 6.367969 ACGTCTAATTTGAAATGTTAGCGAGT 59.632 34.615 15.21 5.49 33.48 4.18
415 708 7.543172 ACGTCTAATTTGAAATGTTAGCGAGTA 59.457 33.333 15.21 0.00 33.48 2.59
416 709 8.540492 CGTCTAATTTGAAATGTTAGCGAGTAT 58.460 33.333 0.00 0.00 32.25 2.12
417 710 9.638300 GTCTAATTTGAAATGTTAGCGAGTATG 57.362 33.333 0.00 0.00 0.00 2.39
418 711 8.335356 TCTAATTTGAAATGTTAGCGAGTATGC 58.665 33.333 0.00 0.00 0.00 3.14
420 713 6.494893 TTTGAAATGTTAGCGAGTATGCTT 57.505 33.333 0.00 0.00 44.46 3.91
421 714 5.469373 TGAAATGTTAGCGAGTATGCTTG 57.531 39.130 0.00 0.00 44.46 4.01
444 753 3.821033 CGAAGTCTTGGGAGAAAAATGGT 59.179 43.478 0.00 0.00 32.66 3.55
477 786 2.611292 GCGGCTGCATGGAATATCTATC 59.389 50.000 14.08 0.00 42.15 2.08
481 790 4.639310 GGCTGCATGGAATATCTATCAAGG 59.361 45.833 0.50 0.00 0.00 3.61
520 829 0.729140 CAGCCCGCACATTTCGAAAC 60.729 55.000 13.81 0.00 0.00 2.78
544 853 4.212214 GCAAAGAAGGTGAGACAAGTACTG 59.788 45.833 0.00 0.00 0.00 2.74
597 907 3.827784 CGCGGAGTTGACGAAGCG 61.828 66.667 0.00 5.98 41.56 4.68
598 908 4.135493 GCGGAGTTGACGAAGCGC 62.135 66.667 0.00 0.00 0.00 5.92
610 920 0.567968 CGAAGCGCAGTCAGATAACG 59.432 55.000 11.47 0.00 0.00 3.18
618 928 4.352039 CGCAGTCAGATAACGTAGAACAT 58.648 43.478 0.00 0.00 0.00 2.71
669 983 1.134530 CACGTCTCGATCGTTCCAGC 61.135 60.000 15.94 1.11 39.55 4.85
691 1009 0.038599 TCTACCGAGCACACAGGGTA 59.961 55.000 0.00 0.00 34.02 3.69
692 1010 0.892755 CTACCGAGCACACAGGGTAA 59.107 55.000 0.00 0.00 34.80 2.85
693 1011 1.274167 CTACCGAGCACACAGGGTAAA 59.726 52.381 0.00 0.00 34.80 2.01
697 1015 2.069273 CGAGCACACAGGGTAAAGAAG 58.931 52.381 0.00 0.00 0.00 2.85
723 1041 1.065551 TGGACTGATCACATACGCTCG 59.934 52.381 0.00 0.00 0.00 5.03
732 1050 0.804364 ACATACGCTCGTCCGTTACA 59.196 50.000 8.23 0.00 42.20 2.41
734 1052 2.159338 ACATACGCTCGTCCGTTACATT 60.159 45.455 8.23 0.00 42.20 2.71
735 1053 2.634982 TACGCTCGTCCGTTACATTT 57.365 45.000 8.23 0.00 42.20 2.32
736 1054 1.787012 ACGCTCGTCCGTTACATTTT 58.213 45.000 0.00 0.00 38.47 1.82
737 1055 2.137523 ACGCTCGTCCGTTACATTTTT 58.862 42.857 0.00 0.00 38.47 1.94
842 1176 1.002366 CCAAGCACGTGCAGAGATAC 58.998 55.000 39.21 10.35 45.16 2.24
859 1193 2.143231 TACCCCAAGTTTTCTCCCCT 57.857 50.000 0.00 0.00 0.00 4.79
895 1229 2.845752 TAGACCCGCCGCATTGTCAC 62.846 60.000 6.67 0.00 0.00 3.67
897 1231 2.125310 CCCGCCGCATTGTCACTA 60.125 61.111 0.00 0.00 0.00 2.74
902 1236 0.108138 GCCGCATTGTCACTACTCCT 60.108 55.000 0.00 0.00 0.00 3.69
904 1238 1.204704 CCGCATTGTCACTACTCCTCA 59.795 52.381 0.00 0.00 0.00 3.86
905 1239 2.353704 CCGCATTGTCACTACTCCTCAA 60.354 50.000 0.00 0.00 0.00 3.02
919 1255 4.380791 ACTCCTCAACCCCTATAAATGGT 58.619 43.478 0.00 0.00 0.00 3.55
925 1261 1.202770 ACCCCTATAAATGGTCGCTGC 60.203 52.381 0.00 0.00 0.00 5.25
949 1291 1.078497 CAGCCGTGGCCTACATCAA 60.078 57.895 7.39 0.00 43.17 2.57
954 1296 1.681780 CCGTGGCCTACATCAACCATT 60.682 52.381 3.32 0.00 34.04 3.16
962 1304 6.006449 GGCCTACATCAACCATTCATCTATT 58.994 40.000 0.00 0.00 0.00 1.73
966 1308 8.727910 CCTACATCAACCATTCATCTATTCATG 58.272 37.037 0.00 0.00 0.00 3.07
978 1320 7.365497 TCATCTATTCATGTCCAAGCTAGAA 57.635 36.000 0.00 0.00 0.00 2.10
992 1334 2.036992 AGCTAGAAGAGGCAATCCATCG 59.963 50.000 0.00 0.00 33.74 3.84
1023 1365 0.409484 AAAGATCTGGGGTGTTGGGG 59.591 55.000 0.00 0.00 0.00 4.96
1030 1372 3.238497 GGGTGTTGGGGTTTGGCC 61.238 66.667 0.00 0.00 0.00 5.36
1038 1380 1.603739 GGGGTTTGGCCACAGACTC 60.604 63.158 3.88 4.41 41.46 3.36
1042 1384 1.168714 GTTTGGCCACAGACTCATCC 58.831 55.000 3.88 0.00 0.00 3.51
1056 1398 1.153107 CATCCAGATGGCCTTCGCA 60.153 57.895 12.65 1.83 36.38 5.10
1188 1530 1.658686 CCAAGGAGGACGAGGAGACG 61.659 65.000 0.00 0.00 41.22 4.18
1236 1578 2.203938 AAGGGCGTCCTCCTCCAA 60.204 61.111 10.20 0.00 44.07 3.53
1281 1623 3.181485 CCCTCATCGTCTTCAAGGTACTC 60.181 52.174 0.00 0.00 38.49 2.59
1282 1624 3.697045 CCTCATCGTCTTCAAGGTACTCT 59.303 47.826 0.00 0.00 38.49 3.24
1283 1625 4.201970 CCTCATCGTCTTCAAGGTACTCTC 60.202 50.000 0.00 0.00 38.49 3.20
1284 1626 4.590918 TCATCGTCTTCAAGGTACTCTCT 58.409 43.478 0.00 0.00 38.49 3.10
1309 1651 3.094062 ATCCCCTCGTCGTGCCATG 62.094 63.158 0.00 0.00 0.00 3.66
1328 1904 1.879380 TGCATGCACAAGTTGGTAGTC 59.121 47.619 18.46 0.00 0.00 2.59
1333 1909 5.720202 CATGCACAAGTTGGTAGTCTAGTA 58.280 41.667 7.96 0.00 0.00 1.82
1335 1911 5.720202 TGCACAAGTTGGTAGTCTAGTATG 58.280 41.667 7.96 0.00 0.00 2.39
1340 1917 9.268268 CACAAGTTGGTAGTCTAGTATGAAAAA 57.732 33.333 7.96 0.00 0.00 1.94
1369 1946 8.811378 GTTTTACATTACGGGATGAAGTAGTAC 58.189 37.037 7.20 0.00 0.00 2.73
1371 1948 6.786967 ACATTACGGGATGAAGTAGTACTT 57.213 37.500 15.48 15.48 41.95 2.24
1385 1962 8.349568 GAAGTAGTACTTCCCCATTTCAAAAT 57.650 34.615 26.33 0.00 46.68 1.82
1386 1963 9.457436 GAAGTAGTACTTCCCCATTTCAAAATA 57.543 33.333 26.33 0.00 46.68 1.40
1387 1964 9.816787 AAGTAGTACTTCCCCATTTCAAAATAA 57.183 29.630 9.85 0.00 31.77 1.40
1391 1968 9.320295 AGTACTTCCCCATTTCAAAATAAATGA 57.680 29.630 10.15 0.00 45.61 2.57
1392 1969 9.366216 GTACTTCCCCATTTCAAAATAAATGAC 57.634 33.333 10.15 0.00 45.61 3.06
1393 1970 8.206126 ACTTCCCCATTTCAAAATAAATGACT 57.794 30.769 10.15 0.00 45.61 3.41
1397 1974 9.936759 TCCCCATTTCAAAATAAATGACTTAAC 57.063 29.630 10.15 0.00 45.61 2.01
1398 1975 9.942850 CCCCATTTCAAAATAAATGACTTAACT 57.057 29.630 10.15 0.00 45.61 2.24
1437 2014 2.814604 CAGATCACCGGCGATGGA 59.185 61.111 10.31 2.53 0.00 3.41
1539 2116 2.936498 GCAATACTTCGTGCACAGGTAT 59.064 45.455 18.64 16.89 40.58 2.73
2041 2620 6.941436 TGATATATATGCATGTTCACTTGGCA 59.059 34.615 10.16 0.00 0.00 4.92
2065 2644 9.134734 GCAAGATATATAGAACTTCACTACAGC 57.865 37.037 0.00 0.00 0.00 4.40
2070 2652 3.572604 AGAACTTCACTACAGCCGTAC 57.427 47.619 0.00 0.00 0.00 3.67
2084 2666 1.269166 CCGTACGTGCTCATGTTCTC 58.731 55.000 15.21 0.00 0.00 2.87
2111 2693 8.893727 GCACTAATAATGTGGTTTCTCACTATT 58.106 33.333 0.00 0.00 38.40 1.73
2121 2703 9.733556 TGTGGTTTCTCACTATTTATATGTTGT 57.266 29.630 0.00 0.00 38.40 3.32
2122 2704 9.988350 GTGGTTTCTCACTATTTATATGTTGTG 57.012 33.333 0.00 0.00 34.98 3.33
2123 2705 8.673711 TGGTTTCTCACTATTTATATGTTGTGC 58.326 33.333 0.00 0.00 0.00 4.57
2124 2706 8.893727 GGTTTCTCACTATTTATATGTTGTGCT 58.106 33.333 0.00 0.00 0.00 4.40
2125 2707 9.922305 GTTTCTCACTATTTATATGTTGTGCTC 57.078 33.333 0.00 0.00 0.00 4.26
2126 2708 8.662781 TTCTCACTATTTATATGTTGTGCTCC 57.337 34.615 0.00 0.00 0.00 4.70
2127 2709 7.217200 TCTCACTATTTATATGTTGTGCTCCC 58.783 38.462 0.00 0.00 0.00 4.30
2128 2710 7.071196 TCTCACTATTTATATGTTGTGCTCCCT 59.929 37.037 0.00 0.00 0.00 4.20
2129 2711 7.573710 TCACTATTTATATGTTGTGCTCCCTT 58.426 34.615 0.00 0.00 0.00 3.95
2130 2712 8.710239 TCACTATTTATATGTTGTGCTCCCTTA 58.290 33.333 0.00 0.00 0.00 2.69
2131 2713 9.507329 CACTATTTATATGTTGTGCTCCCTTAT 57.493 33.333 0.00 0.00 0.00 1.73
2132 2714 9.507329 ACTATTTATATGTTGTGCTCCCTTATG 57.493 33.333 0.00 0.00 0.00 1.90
2133 2715 9.725019 CTATTTATATGTTGTGCTCCCTTATGA 57.275 33.333 0.00 0.00 0.00 2.15
2134 2716 8.995027 ATTTATATGTTGTGCTCCCTTATGAA 57.005 30.769 0.00 0.00 0.00 2.57
2135 2717 8.995027 TTTATATGTTGTGCTCCCTTATGAAT 57.005 30.769 0.00 0.00 0.00 2.57
2168 2750 9.100197 TCTTGTGCTCCCTTATGAATATGTATA 57.900 33.333 0.00 0.00 0.00 1.47
2170 2752 9.671279 TTGTGCTCCCTTATGAATATGTATATG 57.329 33.333 0.00 0.00 0.00 1.78
2171 2753 8.825774 TGTGCTCCCTTATGAATATGTATATGT 58.174 33.333 0.00 0.00 0.00 2.29
2173 2755 9.890629 TGCTCCCTTATGAATATGTATATGTTC 57.109 33.333 2.55 2.55 35.63 3.18
2182 2764 8.962884 TGAATATGTATATGTTCTGTGCTTGT 57.037 30.769 9.70 0.00 35.95 3.16
2185 2767 8.833231 ATATGTATATGTTCTGTGCTTGTACC 57.167 34.615 0.00 0.00 0.00 3.34
2186 2768 6.294361 TGTATATGTTCTGTGCTTGTACCT 57.706 37.500 0.00 0.00 0.00 3.08
2187 2769 6.707290 TGTATATGTTCTGTGCTTGTACCTT 58.293 36.000 0.00 0.00 0.00 3.50
2188 2770 7.842982 TGTATATGTTCTGTGCTTGTACCTTA 58.157 34.615 0.00 0.00 0.00 2.69
2189 2771 8.315482 TGTATATGTTCTGTGCTTGTACCTTAA 58.685 33.333 0.00 0.00 0.00 1.85
2190 2772 7.849804 ATATGTTCTGTGCTTGTACCTTAAG 57.150 36.000 0.00 0.00 0.00 1.85
2191 2773 4.385825 TGTTCTGTGCTTGTACCTTAAGG 58.614 43.478 20.42 20.42 42.17 2.69
2192 2774 3.053831 TCTGTGCTTGTACCTTAAGGC 57.946 47.619 21.92 6.81 39.32 4.35
2193 2775 1.732259 CTGTGCTTGTACCTTAAGGCG 59.268 52.381 21.92 6.25 39.32 5.52
2194 2776 1.071071 TGTGCTTGTACCTTAAGGCGT 59.929 47.619 21.92 5.61 39.32 5.68
2195 2777 2.148768 GTGCTTGTACCTTAAGGCGTT 58.851 47.619 21.92 4.83 39.32 4.84
2196 2778 2.095919 GTGCTTGTACCTTAAGGCGTTG 60.096 50.000 21.92 9.25 39.32 4.10
2197 2779 2.148768 GCTTGTACCTTAAGGCGTTGT 58.851 47.619 21.92 4.04 39.32 3.32
2198 2780 2.551032 GCTTGTACCTTAAGGCGTTGTT 59.449 45.455 21.92 3.26 39.32 2.83
2199 2781 3.004002 GCTTGTACCTTAAGGCGTTGTTT 59.996 43.478 21.92 2.49 39.32 2.83
2200 2782 4.533222 CTTGTACCTTAAGGCGTTGTTTG 58.467 43.478 21.92 1.13 39.32 2.93
2201 2783 2.879646 TGTACCTTAAGGCGTTGTTTGG 59.120 45.455 21.92 0.00 39.32 3.28
2202 2784 2.351706 ACCTTAAGGCGTTGTTTGGA 57.648 45.000 21.92 0.00 39.32 3.53
2203 2785 2.871453 ACCTTAAGGCGTTGTTTGGAT 58.129 42.857 21.92 0.00 39.32 3.41
2204 2786 4.023726 ACCTTAAGGCGTTGTTTGGATA 57.976 40.909 21.92 0.00 39.32 2.59
2205 2787 4.400120 ACCTTAAGGCGTTGTTTGGATAA 58.600 39.130 21.92 0.00 39.32 1.75
2206 2788 4.457949 ACCTTAAGGCGTTGTTTGGATAAG 59.542 41.667 21.92 0.00 39.32 1.73
2207 2789 4.698304 CCTTAAGGCGTTGTTTGGATAAGA 59.302 41.667 9.00 0.00 0.00 2.10
2208 2790 5.163754 CCTTAAGGCGTTGTTTGGATAAGAG 60.164 44.000 9.00 0.00 0.00 2.85
2209 2791 3.695830 AGGCGTTGTTTGGATAAGAGA 57.304 42.857 0.00 0.00 0.00 3.10
2210 2792 4.015872 AGGCGTTGTTTGGATAAGAGAA 57.984 40.909 0.00 0.00 0.00 2.87
2211 2793 4.394729 AGGCGTTGTTTGGATAAGAGAAA 58.605 39.130 0.00 0.00 0.00 2.52
2212 2794 5.010282 AGGCGTTGTTTGGATAAGAGAAAT 58.990 37.500 0.00 0.00 0.00 2.17
2213 2795 6.177610 AGGCGTTGTTTGGATAAGAGAAATA 58.822 36.000 0.00 0.00 0.00 1.40
2214 2796 6.828785 AGGCGTTGTTTGGATAAGAGAAATAT 59.171 34.615 0.00 0.00 0.00 1.28
2215 2797 7.990886 AGGCGTTGTTTGGATAAGAGAAATATA 59.009 33.333 0.00 0.00 0.00 0.86
2216 2798 8.617809 GGCGTTGTTTGGATAAGAGAAATATAA 58.382 33.333 0.00 0.00 0.00 0.98
2217 2799 9.997482 GCGTTGTTTGGATAAGAGAAATATAAA 57.003 29.630 0.00 0.00 0.00 1.40
2237 2819 5.358298 AAAGAACACGATCTACAAAAGCC 57.642 39.130 0.00 0.00 0.00 4.35
2238 2820 4.002906 AGAACACGATCTACAAAAGCCA 57.997 40.909 0.00 0.00 0.00 4.75
2239 2821 4.385825 AGAACACGATCTACAAAAGCCAA 58.614 39.130 0.00 0.00 0.00 4.52
2240 2822 4.452455 AGAACACGATCTACAAAAGCCAAG 59.548 41.667 0.00 0.00 0.00 3.61
2241 2823 3.074412 ACACGATCTACAAAAGCCAAGG 58.926 45.455 0.00 0.00 0.00 3.61
2242 2824 3.244422 ACACGATCTACAAAAGCCAAGGA 60.244 43.478 0.00 0.00 0.00 3.36
2243 2825 3.751175 CACGATCTACAAAAGCCAAGGAA 59.249 43.478 0.00 0.00 0.00 3.36
2244 2826 4.215399 CACGATCTACAAAAGCCAAGGAAA 59.785 41.667 0.00 0.00 0.00 3.13
2245 2827 4.215613 ACGATCTACAAAAGCCAAGGAAAC 59.784 41.667 0.00 0.00 0.00 2.78
2247 2829 5.617751 CGATCTACAAAAGCCAAGGAAACTG 60.618 44.000 0.00 0.00 42.68 3.16
2248 2830 2.602257 ACAAAAGCCAAGGAAACTGC 57.398 45.000 0.00 0.00 42.68 4.40
2249 2831 1.138859 ACAAAAGCCAAGGAAACTGCC 59.861 47.619 0.00 0.00 42.68 4.85
2250 2832 1.413812 CAAAAGCCAAGGAAACTGCCT 59.586 47.619 0.00 0.00 42.68 4.75
2251 2833 2.627699 CAAAAGCCAAGGAAACTGCCTA 59.372 45.455 0.00 0.00 42.68 3.93
2252 2834 2.675658 AAGCCAAGGAAACTGCCTAA 57.324 45.000 0.00 0.00 42.68 2.69
2253 2835 1.911057 AGCCAAGGAAACTGCCTAAC 58.089 50.000 0.00 0.00 42.68 2.34
2254 2836 0.888619 GCCAAGGAAACTGCCTAACC 59.111 55.000 0.00 0.00 42.68 2.85
2255 2837 1.165270 CCAAGGAAACTGCCTAACCG 58.835 55.000 0.00 0.00 42.68 4.44
2256 2838 1.544759 CCAAGGAAACTGCCTAACCGT 60.545 52.381 0.00 0.00 42.68 4.83
2257 2839 2.289819 CCAAGGAAACTGCCTAACCGTA 60.290 50.000 0.00 0.00 42.68 4.02
2258 2840 2.740447 CAAGGAAACTGCCTAACCGTAC 59.260 50.000 0.00 0.00 42.68 3.67
2259 2841 1.972795 AGGAAACTGCCTAACCGTACA 59.027 47.619 0.00 0.00 41.13 2.90
2260 2842 2.369532 AGGAAACTGCCTAACCGTACAA 59.630 45.455 0.00 0.00 41.13 2.41
2261 2843 3.140623 GGAAACTGCCTAACCGTACAAA 58.859 45.455 0.00 0.00 0.00 2.83
2262 2844 3.565063 GGAAACTGCCTAACCGTACAAAA 59.435 43.478 0.00 0.00 0.00 2.44
2263 2845 4.036616 GGAAACTGCCTAACCGTACAAAAA 59.963 41.667 0.00 0.00 0.00 1.94
2264 2846 5.278610 GGAAACTGCCTAACCGTACAAAAAT 60.279 40.000 0.00 0.00 0.00 1.82
2265 2847 5.366829 AACTGCCTAACCGTACAAAAATC 57.633 39.130 0.00 0.00 0.00 2.17
2266 2848 3.434299 ACTGCCTAACCGTACAAAAATCG 59.566 43.478 0.00 0.00 0.00 3.34
2267 2849 3.401182 TGCCTAACCGTACAAAAATCGT 58.599 40.909 0.00 0.00 0.00 3.73
2268 2850 3.432933 TGCCTAACCGTACAAAAATCGTC 59.567 43.478 0.00 0.00 0.00 4.20
2269 2851 3.482436 GCCTAACCGTACAAAAATCGTCG 60.482 47.826 0.00 0.00 0.00 5.12
2270 2852 3.674753 CCTAACCGTACAAAAATCGTCGT 59.325 43.478 0.00 0.00 0.00 4.34
2271 2853 4.150451 CCTAACCGTACAAAAATCGTCGTT 59.850 41.667 0.00 0.00 0.00 3.85
2272 2854 5.344665 CCTAACCGTACAAAAATCGTCGTTA 59.655 40.000 0.00 0.00 0.00 3.18
2273 2855 4.629527 ACCGTACAAAAATCGTCGTTAC 57.370 40.909 0.00 0.00 0.00 2.50
2274 2856 3.428534 ACCGTACAAAAATCGTCGTTACC 59.571 43.478 0.00 0.00 0.00 2.85
2275 2857 3.480185 CCGTACAAAAATCGTCGTTACCG 60.480 47.826 0.00 0.00 0.00 4.02
2276 2858 3.360463 CGTACAAAAATCGTCGTTACCGA 59.640 43.478 0.00 0.00 41.73 4.69
2277 2859 4.487630 CGTACAAAAATCGTCGTTACCGAG 60.488 45.833 0.00 0.00 45.26 4.63
2278 2860 3.383761 ACAAAAATCGTCGTTACCGAGT 58.616 40.909 0.00 0.00 45.26 4.18
2279 2861 3.803778 ACAAAAATCGTCGTTACCGAGTT 59.196 39.130 0.00 0.00 45.26 3.01
2280 2862 4.084900 ACAAAAATCGTCGTTACCGAGTTC 60.085 41.667 0.00 0.00 45.26 3.01
2281 2863 3.565905 AAATCGTCGTTACCGAGTTCT 57.434 42.857 0.00 0.00 45.26 3.01
2282 2864 3.565905 AATCGTCGTTACCGAGTTCTT 57.434 42.857 0.00 0.00 45.26 2.52
2283 2865 3.565905 ATCGTCGTTACCGAGTTCTTT 57.434 42.857 0.00 0.00 45.26 2.52
2284 2866 3.354089 TCGTCGTTACCGAGTTCTTTT 57.646 42.857 0.00 0.00 45.26 2.27
2285 2867 3.044986 TCGTCGTTACCGAGTTCTTTTG 58.955 45.455 0.00 0.00 45.26 2.44
2286 2868 2.791004 CGTCGTTACCGAGTTCTTTTGT 59.209 45.455 0.00 0.00 45.26 2.83
2287 2869 3.121563 CGTCGTTACCGAGTTCTTTTGTC 60.122 47.826 0.00 0.00 45.26 3.18
2288 2870 4.047142 GTCGTTACCGAGTTCTTTTGTCT 58.953 43.478 0.00 0.00 45.26 3.41
2289 2871 4.505556 GTCGTTACCGAGTTCTTTTGTCTT 59.494 41.667 0.00 0.00 45.26 3.01
2290 2872 5.006068 GTCGTTACCGAGTTCTTTTGTCTTT 59.994 40.000 0.00 0.00 45.26 2.52
2291 2873 5.005971 TCGTTACCGAGTTCTTTTGTCTTTG 59.994 40.000 0.00 0.00 38.40 2.77
2292 2874 3.692791 ACCGAGTTCTTTTGTCTTTGC 57.307 42.857 0.00 0.00 0.00 3.68
2293 2875 2.357952 ACCGAGTTCTTTTGTCTTTGCC 59.642 45.455 0.00 0.00 0.00 4.52
2294 2876 2.602217 CCGAGTTCTTTTGTCTTTGCCG 60.602 50.000 0.00 0.00 0.00 5.69
2295 2877 2.286833 CGAGTTCTTTTGTCTTTGCCGA 59.713 45.455 0.00 0.00 0.00 5.54
2296 2878 3.604772 CGAGTTCTTTTGTCTTTGCCGAG 60.605 47.826 0.00 0.00 0.00 4.63
2297 2879 3.279434 AGTTCTTTTGTCTTTGCCGAGT 58.721 40.909 0.00 0.00 0.00 4.18
2298 2880 4.448210 AGTTCTTTTGTCTTTGCCGAGTA 58.552 39.130 0.00 0.00 0.00 2.59
2299 2881 4.272748 AGTTCTTTTGTCTTTGCCGAGTAC 59.727 41.667 0.00 0.00 0.00 2.73
2300 2882 3.799366 TCTTTTGTCTTTGCCGAGTACA 58.201 40.909 0.00 0.00 0.00 2.90
2301 2883 4.193090 TCTTTTGTCTTTGCCGAGTACAA 58.807 39.130 0.00 0.00 0.00 2.41
2302 2884 4.272504 TCTTTTGTCTTTGCCGAGTACAAG 59.727 41.667 0.00 0.00 32.18 3.16
2303 2885 3.462483 TTGTCTTTGCCGAGTACAAGA 57.538 42.857 0.00 0.00 0.00 3.02
2304 2886 3.462483 TGTCTTTGCCGAGTACAAGAA 57.538 42.857 0.00 0.00 0.00 2.52
2305 2887 3.128349 TGTCTTTGCCGAGTACAAGAAC 58.872 45.455 0.00 0.00 0.00 3.01
2306 2888 3.128349 GTCTTTGCCGAGTACAAGAACA 58.872 45.455 0.00 0.00 0.00 3.18
2307 2889 3.746492 GTCTTTGCCGAGTACAAGAACAT 59.254 43.478 0.00 0.00 0.00 2.71
2308 2890 3.745975 TCTTTGCCGAGTACAAGAACATG 59.254 43.478 0.00 0.00 0.00 3.21
2309 2891 2.093306 TGCCGAGTACAAGAACATGG 57.907 50.000 0.00 0.00 0.00 3.66
2310 2892 1.346395 TGCCGAGTACAAGAACATGGT 59.654 47.619 0.00 0.00 0.00 3.55
2311 2893 2.563620 TGCCGAGTACAAGAACATGGTA 59.436 45.455 0.00 0.00 0.00 3.25
2312 2894 3.196901 TGCCGAGTACAAGAACATGGTAT 59.803 43.478 0.00 0.00 0.00 2.73
2313 2895 4.403113 TGCCGAGTACAAGAACATGGTATA 59.597 41.667 0.00 0.00 0.00 1.47
2314 2896 5.105269 TGCCGAGTACAAGAACATGGTATAA 60.105 40.000 0.00 0.00 0.00 0.98
2315 2897 5.233689 GCCGAGTACAAGAACATGGTATAAC 59.766 44.000 0.00 0.00 0.00 1.89
2316 2898 5.457799 CCGAGTACAAGAACATGGTATAACG 59.542 44.000 0.00 0.00 0.00 3.18
2317 2899 5.457799 CGAGTACAAGAACATGGTATAACGG 59.542 44.000 0.00 0.00 0.00 4.44
2318 2900 5.114081 AGTACAAGAACATGGTATAACGGC 58.886 41.667 0.00 0.00 0.00 5.68
2319 2901 3.945346 ACAAGAACATGGTATAACGGCA 58.055 40.909 0.00 0.00 0.00 5.69
2320 2902 4.328536 ACAAGAACATGGTATAACGGCAA 58.671 39.130 0.00 0.00 0.00 4.52
2321 2903 4.762765 ACAAGAACATGGTATAACGGCAAA 59.237 37.500 0.00 0.00 0.00 3.68
2322 2904 5.241949 ACAAGAACATGGTATAACGGCAAAA 59.758 36.000 0.00 0.00 0.00 2.44
2323 2905 5.560966 AGAACATGGTATAACGGCAAAAG 57.439 39.130 0.00 0.00 0.00 2.27
2324 2906 5.250200 AGAACATGGTATAACGGCAAAAGA 58.750 37.500 0.00 0.00 0.00 2.52
2325 2907 4.957759 ACATGGTATAACGGCAAAAGAC 57.042 40.909 0.00 0.00 0.00 3.01
2326 2908 4.328536 ACATGGTATAACGGCAAAAGACA 58.671 39.130 0.00 0.00 0.00 3.41
2327 2909 4.947388 ACATGGTATAACGGCAAAAGACAT 59.053 37.500 0.00 0.00 0.00 3.06
2328 2910 5.065988 ACATGGTATAACGGCAAAAGACATC 59.934 40.000 0.00 0.00 0.00 3.06
2329 2911 4.839121 TGGTATAACGGCAAAAGACATCT 58.161 39.130 0.00 0.00 0.00 2.90
2330 2912 5.979993 TGGTATAACGGCAAAAGACATCTA 58.020 37.500 0.00 0.00 0.00 1.98
2331 2913 6.408035 TGGTATAACGGCAAAAGACATCTAA 58.592 36.000 0.00 0.00 0.00 2.10
2332 2914 6.537301 TGGTATAACGGCAAAAGACATCTAAG 59.463 38.462 0.00 0.00 0.00 2.18
2333 2915 3.831715 AACGGCAAAAGACATCTAAGC 57.168 42.857 0.00 0.00 0.00 3.09
2334 2916 2.084546 ACGGCAAAAGACATCTAAGCC 58.915 47.619 8.40 8.40 35.36 4.35
2335 2917 1.062587 CGGCAAAAGACATCTAAGCCG 59.937 52.381 20.06 20.06 46.28 5.52
2336 2918 2.356135 GGCAAAAGACATCTAAGCCGA 58.644 47.619 0.00 0.00 31.13 5.54
2337 2919 2.352960 GGCAAAAGACATCTAAGCCGAG 59.647 50.000 0.00 0.00 31.13 4.63
2338 2920 3.003480 GCAAAAGACATCTAAGCCGAGT 58.997 45.455 0.00 0.00 0.00 4.18
2339 2921 4.181578 GCAAAAGACATCTAAGCCGAGTA 58.818 43.478 0.00 0.00 0.00 2.59
2340 2922 4.033014 GCAAAAGACATCTAAGCCGAGTAC 59.967 45.833 0.00 0.00 0.00 2.73
2341 2923 5.168569 CAAAAGACATCTAAGCCGAGTACA 58.831 41.667 0.00 0.00 0.00 2.90
2342 2924 5.401531 AAAGACATCTAAGCCGAGTACAA 57.598 39.130 0.00 0.00 0.00 2.41
2343 2925 4.640789 AGACATCTAAGCCGAGTACAAG 57.359 45.455 0.00 0.00 0.00 3.16
2344 2926 4.017808 AGACATCTAAGCCGAGTACAAGT 58.982 43.478 0.00 0.00 0.00 3.16
2345 2927 4.096682 AGACATCTAAGCCGAGTACAAGTC 59.903 45.833 0.00 0.00 0.00 3.01
2346 2928 4.017808 ACATCTAAGCCGAGTACAAGTCT 58.982 43.478 0.00 0.00 0.00 3.24
2347 2929 4.096682 ACATCTAAGCCGAGTACAAGTCTC 59.903 45.833 0.00 0.00 0.00 3.36
2348 2930 3.682696 TCTAAGCCGAGTACAAGTCTCA 58.317 45.455 0.00 0.00 32.79 3.27
2349 2931 3.690139 TCTAAGCCGAGTACAAGTCTCAG 59.310 47.826 0.00 0.00 32.79 3.35
2350 2932 0.528470 AGCCGAGTACAAGTCTCAGC 59.472 55.000 0.00 0.00 36.10 4.26
2351 2933 0.243907 GCCGAGTACAAGTCTCAGCA 59.756 55.000 0.00 0.00 35.96 4.41
2352 2934 1.983972 CCGAGTACAAGTCTCAGCAC 58.016 55.000 0.00 0.00 32.79 4.40
2353 2935 1.269723 CCGAGTACAAGTCTCAGCACA 59.730 52.381 0.00 0.00 32.79 4.57
2354 2936 2.320367 CGAGTACAAGTCTCAGCACAC 58.680 52.381 0.00 0.00 32.79 3.82
2355 2937 2.287608 CGAGTACAAGTCTCAGCACACA 60.288 50.000 0.00 0.00 32.79 3.72
2356 2938 3.053455 GAGTACAAGTCTCAGCACACAC 58.947 50.000 0.00 0.00 32.79 3.82
2357 2939 2.695666 AGTACAAGTCTCAGCACACACT 59.304 45.455 0.00 0.00 0.00 3.55
2358 2940 3.889538 AGTACAAGTCTCAGCACACACTA 59.110 43.478 0.00 0.00 0.00 2.74
2359 2941 4.524714 AGTACAAGTCTCAGCACACACTAT 59.475 41.667 0.00 0.00 0.00 2.12
2360 2942 3.657634 ACAAGTCTCAGCACACACTATG 58.342 45.455 0.00 0.00 0.00 2.23
2361 2943 3.321968 ACAAGTCTCAGCACACACTATGA 59.678 43.478 0.00 0.00 0.00 2.15
2362 2944 3.584406 AGTCTCAGCACACACTATGAC 57.416 47.619 0.00 0.00 0.00 3.06
2363 2945 2.893489 AGTCTCAGCACACACTATGACA 59.107 45.455 0.00 0.00 0.00 3.58
2364 2946 2.989840 GTCTCAGCACACACTATGACAC 59.010 50.000 0.00 0.00 0.00 3.67
2365 2947 1.988467 CTCAGCACACACTATGACACG 59.012 52.381 0.00 0.00 0.00 4.49
2366 2948 1.070821 CAGCACACACTATGACACGG 58.929 55.000 0.00 0.00 0.00 4.94
2367 2949 0.670546 AGCACACACTATGACACGGC 60.671 55.000 0.00 0.00 0.00 5.68
2368 2950 0.948623 GCACACACTATGACACGGCA 60.949 55.000 0.00 0.00 0.00 5.69
2369 2951 0.790207 CACACACTATGACACGGCAC 59.210 55.000 0.00 0.00 0.00 5.01
2370 2952 0.391228 ACACACTATGACACGGCACA 59.609 50.000 0.00 0.00 0.00 4.57
2371 2953 1.001974 ACACACTATGACACGGCACAT 59.998 47.619 0.00 0.00 0.00 3.21
2372 2954 1.394572 CACACTATGACACGGCACATG 59.605 52.381 0.00 0.00 0.00 3.21
2373 2955 1.009078 CACTATGACACGGCACATGG 58.991 55.000 0.00 0.00 0.00 3.66
2374 2956 0.107703 ACTATGACACGGCACATGGG 60.108 55.000 0.00 0.00 31.07 4.00
2375 2957 0.177836 CTATGACACGGCACATGGGA 59.822 55.000 0.00 0.00 0.00 4.37
2376 2958 0.615850 TATGACACGGCACATGGGAA 59.384 50.000 0.00 0.00 0.00 3.97
2377 2959 0.677731 ATGACACGGCACATGGGAAG 60.678 55.000 0.00 0.00 0.00 3.46
2378 2960 2.672996 ACACGGCACATGGGAAGC 60.673 61.111 0.00 0.00 0.00 3.86
2379 2961 2.360350 CACGGCACATGGGAAGCT 60.360 61.111 0.00 0.00 0.00 3.74
2380 2962 2.045926 ACGGCACATGGGAAGCTC 60.046 61.111 0.00 0.00 0.00 4.09
2381 2963 2.270205 CGGCACATGGGAAGCTCT 59.730 61.111 0.00 0.00 0.00 4.09
2382 2964 1.264749 ACGGCACATGGGAAGCTCTA 61.265 55.000 0.00 0.00 0.00 2.43
2383 2965 0.811616 CGGCACATGGGAAGCTCTAC 60.812 60.000 0.00 0.00 0.00 2.59
2384 2966 0.464554 GGCACATGGGAAGCTCTACC 60.465 60.000 0.00 0.00 0.00 3.18
2385 2967 0.811616 GCACATGGGAAGCTCTACCG 60.812 60.000 0.00 0.00 0.00 4.02
2386 2968 0.824109 CACATGGGAAGCTCTACCGA 59.176 55.000 0.00 0.00 0.00 4.69
2387 2969 1.115467 ACATGGGAAGCTCTACCGAG 58.885 55.000 0.00 0.00 40.35 4.63
2388 2970 1.115467 CATGGGAAGCTCTACCGAGT 58.885 55.000 0.00 0.00 39.53 4.18
2389 2971 1.067821 CATGGGAAGCTCTACCGAGTC 59.932 57.143 0.00 0.00 39.53 3.36
2390 2972 0.683504 TGGGAAGCTCTACCGAGTCC 60.684 60.000 0.00 0.00 39.53 3.85
2391 2973 0.396001 GGGAAGCTCTACCGAGTCCT 60.396 60.000 0.00 0.00 39.53 3.85
2392 2974 0.741915 GGAAGCTCTACCGAGTCCTG 59.258 60.000 0.00 0.00 39.53 3.86
2393 2975 0.101579 GAAGCTCTACCGAGTCCTGC 59.898 60.000 0.00 0.00 39.53 4.85
2394 2976 1.324005 AAGCTCTACCGAGTCCTGCC 61.324 60.000 0.00 0.00 39.53 4.85
2395 2977 3.111939 CTCTACCGAGTCCTGCCG 58.888 66.667 0.00 0.00 32.47 5.69
2400 2982 3.217231 CCGAGTCCTGCCGGTTAT 58.783 61.111 1.90 0.00 40.78 1.89
2401 2983 2.422303 CCGAGTCCTGCCGGTTATA 58.578 57.895 1.90 0.00 40.78 0.98
2402 2984 0.031721 CCGAGTCCTGCCGGTTATAC 59.968 60.000 1.90 0.00 40.78 1.47
2403 2985 0.742505 CGAGTCCTGCCGGTTATACA 59.257 55.000 1.90 0.00 0.00 2.29
2404 2986 1.535437 CGAGTCCTGCCGGTTATACAC 60.535 57.143 1.90 0.00 0.00 2.90
2405 2987 1.755380 GAGTCCTGCCGGTTATACACT 59.245 52.381 1.90 0.00 0.00 3.55
2406 2988 1.755380 AGTCCTGCCGGTTATACACTC 59.245 52.381 1.90 0.00 0.00 3.51
2407 2989 0.742505 TCCTGCCGGTTATACACTCG 59.257 55.000 1.90 0.00 0.00 4.18
2408 2990 0.249322 CCTGCCGGTTATACACTCGG 60.249 60.000 1.90 0.00 40.39 4.63
2411 2993 3.744941 CCGGTTATACACTCGGCAA 57.255 52.632 0.00 0.00 33.97 4.52
2412 2994 2.012937 CCGGTTATACACTCGGCAAA 57.987 50.000 0.00 0.00 33.97 3.68
2413 2995 1.662122 CCGGTTATACACTCGGCAAAC 59.338 52.381 0.00 0.00 33.97 2.93
2414 2996 2.339418 CGGTTATACACTCGGCAAACA 58.661 47.619 0.00 0.00 0.00 2.83
2415 2997 2.933906 CGGTTATACACTCGGCAAACAT 59.066 45.455 0.00 0.00 0.00 2.71
2416 2998 4.114073 CGGTTATACACTCGGCAAACATA 58.886 43.478 0.00 0.00 0.00 2.29
2417 2999 4.567558 CGGTTATACACTCGGCAAACATAA 59.432 41.667 0.00 0.00 0.00 1.90
2418 3000 5.063691 CGGTTATACACTCGGCAAACATAAA 59.936 40.000 0.00 0.00 0.00 1.40
2419 3001 6.483687 GGTTATACACTCGGCAAACATAAAG 58.516 40.000 0.00 0.00 0.00 1.85
2420 3002 6.457799 GGTTATACACTCGGCAAACATAAAGG 60.458 42.308 0.00 0.00 0.00 3.11
2421 3003 1.539827 ACACTCGGCAAACATAAAGGC 59.460 47.619 0.00 0.00 0.00 4.35
2422 3004 1.539388 CACTCGGCAAACATAAAGGCA 59.461 47.619 0.00 0.00 0.00 4.75
2423 3005 1.539827 ACTCGGCAAACATAAAGGCAC 59.460 47.619 0.00 0.00 0.00 5.01
2425 3007 1.810151 TCGGCAAACATAAAGGCACTC 59.190 47.619 0.00 0.00 38.49 3.51
2426 3008 1.465689 CGGCAAACATAAAGGCACTCG 60.466 52.381 0.00 0.00 38.49 4.18
2427 3009 1.135402 GGCAAACATAAAGGCACTCGG 60.135 52.381 0.00 0.00 38.49 4.63
2428 3010 1.732405 GCAAACATAAAGGCACTCGGC 60.732 52.381 0.00 0.00 38.49 5.54
2436 3018 4.147701 GGCACTCGGCTTATGCAT 57.852 55.556 3.79 3.79 44.01 3.96
2437 3019 3.305709 GGCACTCGGCTTATGCATA 57.694 52.632 1.16 1.16 44.01 3.14
2438 3020 1.151668 GGCACTCGGCTTATGCATAG 58.848 55.000 6.50 0.00 44.01 2.23
2439 3021 1.541233 GGCACTCGGCTTATGCATAGT 60.541 52.381 6.50 0.00 44.01 2.12
2440 3022 2.288825 GGCACTCGGCTTATGCATAGTA 60.289 50.000 6.50 0.00 44.01 1.82
2441 3023 3.589988 GCACTCGGCTTATGCATAGTAT 58.410 45.455 6.50 0.00 41.91 2.12
2442 3024 4.381612 GGCACTCGGCTTATGCATAGTATA 60.382 45.833 6.50 0.00 44.01 1.47
2443 3025 4.800993 GCACTCGGCTTATGCATAGTATAG 59.199 45.833 6.50 2.70 41.91 1.31
2444 3026 4.800993 CACTCGGCTTATGCATAGTATAGC 59.199 45.833 16.50 16.50 41.91 2.97
2445 3027 4.028852 TCGGCTTATGCATAGTATAGCG 57.971 45.455 17.64 13.96 41.91 4.26
2446 3028 3.692593 TCGGCTTATGCATAGTATAGCGA 59.307 43.478 17.64 15.45 41.91 4.93
2447 3029 4.157105 TCGGCTTATGCATAGTATAGCGAA 59.843 41.667 17.64 8.68 41.91 4.70
2448 3030 5.043903 CGGCTTATGCATAGTATAGCGAAT 58.956 41.667 17.64 0.00 41.91 3.34
2449 3031 5.051441 CGGCTTATGCATAGTATAGCGAATG 60.051 44.000 17.64 7.54 41.91 2.67
2450 3032 5.277058 GGCTTATGCATAGTATAGCGAATGC 60.277 44.000 17.64 5.42 43.92 3.56
2451 3033 5.277058 GCTTATGCATAGTATAGCGAATGCC 60.277 44.000 11.34 0.00 43.19 4.40
2452 3034 2.972625 TGCATAGTATAGCGAATGCCC 58.027 47.619 3.91 0.00 43.19 5.36
2453 3035 2.567169 TGCATAGTATAGCGAATGCCCT 59.433 45.455 3.91 0.00 43.19 5.19
2454 3036 2.932614 GCATAGTATAGCGAATGCCCTG 59.067 50.000 0.00 0.00 44.31 4.45
2455 3037 3.617531 GCATAGTATAGCGAATGCCCTGT 60.618 47.826 0.00 0.00 44.31 4.00
2456 3038 4.381612 GCATAGTATAGCGAATGCCCTGTA 60.382 45.833 0.00 0.00 44.31 2.74
2457 3039 3.944055 AGTATAGCGAATGCCCTGTAG 57.056 47.619 0.00 0.00 44.31 2.74
2458 3040 3.497332 AGTATAGCGAATGCCCTGTAGA 58.503 45.455 0.00 0.00 44.31 2.59
2459 3041 3.508012 AGTATAGCGAATGCCCTGTAGAG 59.492 47.826 0.00 0.00 44.31 2.43
2460 3042 1.040646 TAGCGAATGCCCTGTAGAGG 58.959 55.000 0.00 0.00 44.31 3.69
2467 3049 3.470888 CCCTGTAGAGGCACCCGG 61.471 72.222 0.00 0.00 38.17 5.73
2468 3050 4.162690 CCTGTAGAGGCACCCGGC 62.163 72.222 0.00 0.00 43.74 6.13
2477 3059 3.827634 GCACCCGGCAAATAGGAG 58.172 61.111 0.00 0.00 43.97 3.69
2478 3060 2.481471 GCACCCGGCAAATAGGAGC 61.481 63.158 0.00 0.00 43.97 4.70
2485 3067 2.098293 GCAAATAGGAGCCACGTGG 58.902 57.895 30.66 30.66 38.53 4.94
2503 3085 4.688419 CACGGCCGTTTGCAGCTG 62.688 66.667 32.11 11.40 43.89 4.24
2504 3086 4.927782 ACGGCCGTTTGCAGCTGA 62.928 61.111 28.70 0.00 43.89 4.26
2505 3087 4.389576 CGGCCGTTTGCAGCTGAC 62.390 66.667 20.43 9.67 43.89 3.51
2506 3088 2.980233 GGCCGTTTGCAGCTGACT 60.980 61.111 20.43 0.00 43.89 3.41
2508 3090 2.546494 GCCGTTTGCAGCTGACTGT 61.546 57.895 20.43 0.00 46.30 3.55
2509 3091 1.571460 CCGTTTGCAGCTGACTGTC 59.429 57.895 20.43 0.00 46.30 3.51
2510 3092 1.571460 CGTTTGCAGCTGACTGTCC 59.429 57.895 20.43 0.00 46.30 4.02
2511 3093 0.882042 CGTTTGCAGCTGACTGTCCT 60.882 55.000 20.43 0.00 46.30 3.85
2512 3094 1.605457 CGTTTGCAGCTGACTGTCCTA 60.605 52.381 20.43 0.00 46.30 2.94
2513 3095 2.704572 GTTTGCAGCTGACTGTCCTAT 58.295 47.619 20.43 0.00 46.30 2.57
2514 3096 2.391616 TTGCAGCTGACTGTCCTATG 57.608 50.000 20.43 2.41 46.30 2.23
2515 3097 1.560505 TGCAGCTGACTGTCCTATGA 58.439 50.000 20.43 0.00 46.30 2.15
2516 3098 1.205655 TGCAGCTGACTGTCCTATGAC 59.794 52.381 20.43 0.00 46.30 3.06
2557 3140 7.668469 TGGTACTAAGACTGACAGTAGAAATGA 59.332 37.037 8.41 0.00 0.00 2.57
2558 3141 8.688151 GGTACTAAGACTGACAGTAGAAATGAT 58.312 37.037 8.41 0.00 0.00 2.45
2624 3208 4.211374 ACACACAAGATTTACGAGTTCAGC 59.789 41.667 0.00 0.00 0.00 4.26
2722 3306 2.430367 GGGTGCGAACCCTTGTCT 59.570 61.111 25.95 0.00 46.39 3.41
3060 3647 1.720533 AGGGTAGTGACCTTGGGTAGA 59.279 52.381 0.00 0.00 46.09 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.324991 AACTCCAACGGGCCGACC 62.325 66.667 35.78 0.00 0.00 4.79
1 2 3.047877 CAACTCCAACGGGCCGAC 61.048 66.667 35.78 0.00 0.00 4.79
6 7 1.002087 AGTAAGAGCAACTCCAACGGG 59.998 52.381 0.00 0.00 0.00 5.28
8 9 3.056749 AGGTAGTAAGAGCAACTCCAACG 60.057 47.826 0.00 0.00 0.00 4.10
9 10 4.538746 AGGTAGTAAGAGCAACTCCAAC 57.461 45.455 0.00 0.00 0.00 3.77
10 11 4.802918 GCAAGGTAGTAAGAGCAACTCCAA 60.803 45.833 0.00 0.00 0.00 3.53
11 12 3.306780 GCAAGGTAGTAAGAGCAACTCCA 60.307 47.826 0.00 0.00 0.00 3.86
12 13 3.055747 AGCAAGGTAGTAAGAGCAACTCC 60.056 47.826 0.00 0.00 0.00 3.85
13 14 4.195225 AGCAAGGTAGTAAGAGCAACTC 57.805 45.455 0.00 0.00 0.00 3.01
14 15 5.246429 AGTTAGCAAGGTAGTAAGAGCAACT 59.754 40.000 0.00 0.00 0.00 3.16
15 16 5.480205 AGTTAGCAAGGTAGTAAGAGCAAC 58.520 41.667 0.00 0.00 0.00 4.17
16 17 5.740290 AGTTAGCAAGGTAGTAAGAGCAA 57.260 39.130 0.00 0.00 0.00 3.91
17 18 6.662234 TCTTAGTTAGCAAGGTAGTAAGAGCA 59.338 38.462 0.00 0.00 31.96 4.26
18 19 6.974048 GTCTTAGTTAGCAAGGTAGTAAGAGC 59.026 42.308 10.79 0.00 35.56 4.09
19 20 7.122353 TGGTCTTAGTTAGCAAGGTAGTAAGAG 59.878 40.741 10.79 0.00 35.56 2.85
57 58 7.750229 AAACATGTGTGTGATCTTGATTAGT 57.250 32.000 0.00 0.00 38.92 2.24
93 337 7.616313 AGAATTCCTCTTCGAGTGAATAACTT 58.384 34.615 0.65 0.00 40.07 2.66
94 338 7.176589 AGAATTCCTCTTCGAGTGAATAACT 57.823 36.000 0.65 7.64 43.85 2.24
95 339 8.928270 TTAGAATTCCTCTTCGAGTGAATAAC 57.072 34.615 0.65 6.29 35.41 1.89
96 340 7.707035 GCTTAGAATTCCTCTTCGAGTGAATAA 59.293 37.037 0.65 0.00 35.41 1.40
170 414 1.202031 CCGCCGAAAGAAAAATCGAGG 60.202 52.381 0.00 0.00 41.43 4.63
315 606 4.202101 CCTTCACCAGAGATAGCACTAGTG 60.202 50.000 18.93 18.93 0.00 2.74
324 615 3.730116 TGGGCCTTCACCAGAGATA 57.270 52.632 4.53 0.00 33.23 1.98
331 622 3.637273 ACGACCTGGGCCTTCACC 61.637 66.667 4.53 0.00 0.00 4.02
368 660 2.037121 TCTTGACCTTCACAGCGAATGA 59.963 45.455 0.00 0.00 31.69 2.57
409 702 0.299003 GACTTCGCAAGCATACTCGC 59.701 55.000 0.00 0.00 37.18 5.03
410 703 1.914634 AGACTTCGCAAGCATACTCG 58.085 50.000 0.00 0.00 37.18 4.18
411 704 2.349886 CCAAGACTTCGCAAGCATACTC 59.650 50.000 0.00 0.00 37.18 2.59
412 705 2.350522 CCAAGACTTCGCAAGCATACT 58.649 47.619 0.00 0.00 37.18 2.12
413 706 1.398390 CCCAAGACTTCGCAAGCATAC 59.602 52.381 0.00 0.00 37.18 2.39
414 707 1.277842 TCCCAAGACTTCGCAAGCATA 59.722 47.619 0.00 0.00 37.18 3.14
415 708 0.036732 TCCCAAGACTTCGCAAGCAT 59.963 50.000 0.00 0.00 37.18 3.79
416 709 0.603707 CTCCCAAGACTTCGCAAGCA 60.604 55.000 0.00 0.00 37.18 3.91
417 710 0.320771 TCTCCCAAGACTTCGCAAGC 60.321 55.000 0.00 0.00 37.18 4.01
418 711 2.169832 TTCTCCCAAGACTTCGCAAG 57.830 50.000 0.00 0.00 0.00 4.01
419 712 2.631160 TTTCTCCCAAGACTTCGCAA 57.369 45.000 0.00 0.00 0.00 4.85
420 713 2.631160 TTTTCTCCCAAGACTTCGCA 57.369 45.000 0.00 0.00 0.00 5.10
421 714 3.366374 CCATTTTTCTCCCAAGACTTCGC 60.366 47.826 0.00 0.00 0.00 4.70
422 715 3.821033 ACCATTTTTCTCCCAAGACTTCG 59.179 43.478 0.00 0.00 0.00 3.79
423 716 4.559502 GCACCATTTTTCTCCCAAGACTTC 60.560 45.833 0.00 0.00 0.00 3.01
424 717 3.321968 GCACCATTTTTCTCCCAAGACTT 59.678 43.478 0.00 0.00 0.00 3.01
460 769 4.331992 CGCCTTGATAGATATTCCATGCAG 59.668 45.833 0.00 0.00 0.00 4.41
477 786 1.577328 ATTTGGTCAGCGACGCCTTG 61.577 55.000 17.79 9.65 32.65 3.61
481 790 1.573829 TTCCATTTGGTCAGCGACGC 61.574 55.000 13.03 13.03 36.34 5.19
509 818 3.066203 ACCTTCTTTGCGTTTCGAAATGT 59.934 39.130 26.40 5.32 0.00 2.71
520 829 2.213499 ACTTGTCTCACCTTCTTTGCG 58.787 47.619 0.00 0.00 0.00 4.85
544 853 4.436242 TGTTCGTCCAACTCTATCTGTC 57.564 45.455 0.00 0.00 35.79 3.51
597 907 6.470160 CAAATGTTCTACGTTATCTGACTGC 58.530 40.000 0.00 0.00 0.00 4.40
598 908 6.090763 TGCAAATGTTCTACGTTATCTGACTG 59.909 38.462 0.00 0.00 0.00 3.51
610 920 4.829064 TGGTGTTCTGCAAATGTTCTAC 57.171 40.909 0.00 0.00 0.00 2.59
618 928 1.732917 CCGCTTGGTGTTCTGCAAA 59.267 52.632 0.00 0.00 0.00 3.68
669 983 0.248661 CCTGTGTGCTCGGTAGATCG 60.249 60.000 0.00 0.00 0.00 3.69
691 1009 5.188555 TGTGATCAGTCCAGCTATCTTCTTT 59.811 40.000 0.00 0.00 0.00 2.52
692 1010 4.713814 TGTGATCAGTCCAGCTATCTTCTT 59.286 41.667 0.00 0.00 0.00 2.52
693 1011 4.285020 TGTGATCAGTCCAGCTATCTTCT 58.715 43.478 0.00 0.00 0.00 2.85
697 1015 4.480541 CGTATGTGATCAGTCCAGCTATC 58.519 47.826 0.00 0.00 0.00 2.08
736 1054 9.554395 TCTTGTGTCTGTACTAATGATCAAAAA 57.446 29.630 0.00 0.00 0.00 1.94
737 1055 8.988934 GTCTTGTGTCTGTACTAATGATCAAAA 58.011 33.333 0.00 0.00 0.00 2.44
738 1056 8.147704 TGTCTTGTGTCTGTACTAATGATCAAA 58.852 33.333 0.00 0.00 0.00 2.69
740 1058 7.090808 GTGTCTTGTGTCTGTACTAATGATCA 58.909 38.462 0.00 0.00 0.00 2.92
743 1061 5.009310 ACGTGTCTTGTGTCTGTACTAATGA 59.991 40.000 0.00 0.00 0.00 2.57
744 1062 5.117135 CACGTGTCTTGTGTCTGTACTAATG 59.883 44.000 7.58 0.00 32.68 1.90
746 1064 4.603985 CACGTGTCTTGTGTCTGTACTAA 58.396 43.478 7.58 0.00 32.68 2.24
747 1065 3.549423 GCACGTGTCTTGTGTCTGTACTA 60.549 47.826 18.38 0.00 39.53 1.82
748 1066 2.798499 GCACGTGTCTTGTGTCTGTACT 60.798 50.000 18.38 0.00 39.53 2.73
749 1067 1.521423 GCACGTGTCTTGTGTCTGTAC 59.479 52.381 18.38 0.00 39.53 2.90
750 1068 1.847818 GCACGTGTCTTGTGTCTGTA 58.152 50.000 18.38 0.00 39.53 2.74
752 1070 0.869880 TCGCACGTGTCTTGTGTCTG 60.870 55.000 18.38 0.00 39.53 3.51
753 1071 0.595053 CTCGCACGTGTCTTGTGTCT 60.595 55.000 18.38 0.00 39.53 3.41
754 1072 0.870307 ACTCGCACGTGTCTTGTGTC 60.870 55.000 18.38 0.00 39.53 3.67
755 1073 1.141019 ACTCGCACGTGTCTTGTGT 59.859 52.632 18.38 8.91 39.53 3.72
756 1074 1.145759 ACACTCGCACGTGTCTTGTG 61.146 55.000 18.38 20.55 44.32 3.33
757 1075 0.459585 AACACTCGCACGTGTCTTGT 60.460 50.000 18.38 12.26 46.71 3.16
758 1076 0.043053 CAACACTCGCACGTGTCTTG 60.043 55.000 18.38 11.63 46.71 3.02
759 1077 1.762222 GCAACACTCGCACGTGTCTT 61.762 55.000 18.38 0.00 46.71 3.01
760 1078 2.237751 GCAACACTCGCACGTGTCT 61.238 57.895 18.38 0.00 46.71 3.41
776 1100 2.745884 CCGACGGGAAAGCATGCA 60.746 61.111 21.98 0.00 34.06 3.96
842 1176 0.482887 ACAGGGGAGAAAACTTGGGG 59.517 55.000 0.00 0.00 0.00 4.96
895 1229 5.607171 ACCATTTATAGGGGTTGAGGAGTAG 59.393 44.000 0.00 0.00 0.00 2.57
897 1231 4.380791 ACCATTTATAGGGGTTGAGGAGT 58.619 43.478 0.00 0.00 0.00 3.85
902 1236 2.775384 AGCGACCATTTATAGGGGTTGA 59.225 45.455 9.72 0.00 38.17 3.18
904 1238 2.748465 GCAGCGACCATTTATAGGGGTT 60.748 50.000 0.00 0.00 34.39 4.11
905 1239 1.202770 GCAGCGACCATTTATAGGGGT 60.203 52.381 0.00 0.00 37.70 4.95
949 1291 5.533903 GCTTGGACATGAATAGATGAATGGT 59.466 40.000 0.00 0.00 0.00 3.55
954 1296 6.983906 TCTAGCTTGGACATGAATAGATGA 57.016 37.500 0.00 0.00 0.00 2.92
962 1304 2.169352 GCCTCTTCTAGCTTGGACATGA 59.831 50.000 0.00 0.00 0.00 3.07
966 1308 2.770164 TTGCCTCTTCTAGCTTGGAC 57.230 50.000 0.00 0.00 0.00 4.02
978 1320 0.107508 CACACCGATGGATTGCCTCT 60.108 55.000 0.00 0.00 34.31 3.69
992 1334 1.394917 CAGATCTTTACAGCGCACACC 59.605 52.381 11.47 0.00 0.00 4.16
1023 1365 1.168714 GGATGAGTCTGTGGCCAAAC 58.831 55.000 7.24 6.53 0.00 2.93
1030 1372 1.474677 GGCCATCTGGATGAGTCTGTG 60.475 57.143 11.66 0.00 41.20 3.66
1034 1376 1.539929 CGAAGGCCATCTGGATGAGTC 60.540 57.143 5.01 4.36 41.20 3.36
1038 1380 1.153107 TGCGAAGGCCATCTGGATG 60.153 57.895 5.01 3.79 38.85 3.51
1042 1384 0.809241 GAGACTGCGAAGGCCATCTG 60.809 60.000 5.01 0.00 38.85 2.90
1056 1398 0.745128 CCAGTAGCTCGTCCGAGACT 60.745 60.000 20.07 16.88 44.53 3.24
1281 1623 1.896465 GACGAGGGGATGGGATTAGAG 59.104 57.143 0.00 0.00 0.00 2.43
1282 1624 1.822062 CGACGAGGGGATGGGATTAGA 60.822 57.143 0.00 0.00 0.00 2.10
1283 1625 0.603569 CGACGAGGGGATGGGATTAG 59.396 60.000 0.00 0.00 0.00 1.73
1284 1626 0.105862 ACGACGAGGGGATGGGATTA 60.106 55.000 0.00 0.00 0.00 1.75
1309 1651 2.154462 AGACTACCAACTTGTGCATGC 58.846 47.619 11.82 11.82 0.00 4.06
1340 1917 5.702209 ACTTCATCCCGTAATGTAAAACGTT 59.298 36.000 0.00 0.00 37.40 3.99
1371 1948 9.936759 GTTAAGTCATTTATTTTGAAATGGGGA 57.063 29.630 8.56 0.00 43.87 4.81
1391 1968 9.938280 TGCATGATAGTTAGTACAAAGTTAAGT 57.062 29.630 0.00 0.00 0.00 2.24
1395 1972 7.336679 TGCATGCATGATAGTTAGTACAAAGTT 59.663 33.333 30.64 0.00 0.00 2.66
1396 1973 6.823182 TGCATGCATGATAGTTAGTACAAAGT 59.177 34.615 30.64 0.00 0.00 2.66
1397 1974 7.225341 TCTGCATGCATGATAGTTAGTACAAAG 59.775 37.037 30.64 2.54 0.00 2.77
1398 1975 7.047271 TCTGCATGCATGATAGTTAGTACAAA 58.953 34.615 30.64 5.41 0.00 2.83
1399 1976 6.581712 TCTGCATGCATGATAGTTAGTACAA 58.418 36.000 30.64 6.06 0.00 2.41
1400 1977 6.160576 TCTGCATGCATGATAGTTAGTACA 57.839 37.500 30.64 12.77 0.00 2.90
1401 1978 6.870439 TGATCTGCATGCATGATAGTTAGTAC 59.130 38.462 30.64 8.66 0.00 2.73
1402 1979 6.870439 GTGATCTGCATGCATGATAGTTAGTA 59.130 38.462 30.64 10.75 0.00 1.82
1403 1980 5.699915 GTGATCTGCATGCATGATAGTTAGT 59.300 40.000 30.64 13.57 0.00 2.24
1404 1981 5.121925 GGTGATCTGCATGCATGATAGTTAG 59.878 44.000 30.64 15.74 0.00 2.34
1405 1982 4.999311 GGTGATCTGCATGCATGATAGTTA 59.001 41.667 30.64 12.06 0.00 2.24
1406 1983 3.819337 GGTGATCTGCATGCATGATAGTT 59.181 43.478 30.64 19.76 0.00 2.24
1407 1984 3.409570 GGTGATCTGCATGCATGATAGT 58.590 45.455 30.64 15.80 0.00 2.12
1408 1985 2.415512 CGGTGATCTGCATGCATGATAG 59.584 50.000 30.64 24.20 0.00 2.08
1409 1986 2.419667 CGGTGATCTGCATGCATGATA 58.580 47.619 30.64 16.39 0.00 2.15
1410 1987 1.235724 CGGTGATCTGCATGCATGAT 58.764 50.000 30.64 23.51 0.00 2.45
1411 1988 0.816421 CCGGTGATCTGCATGCATGA 60.816 55.000 30.64 19.98 0.00 3.07
1437 2014 2.915659 TCCCTCGTGTCGTGGCTT 60.916 61.111 4.97 0.00 38.90 4.35
1442 2019 4.057428 GCTGCTCCCTCGTGTCGT 62.057 66.667 0.00 0.00 0.00 4.34
1521 2098 3.068307 GGAGATACCTGTGCACGAAGTAT 59.932 47.826 20.01 20.01 35.20 2.12
1539 2116 1.843851 AGGAACTTGTTGGTGTGGAGA 59.156 47.619 0.00 0.00 27.25 3.71
1608 2185 2.105128 CTGTAGAGCGCCCCGAAG 59.895 66.667 2.29 0.00 0.00 3.79
1635 2212 2.285592 TCCATGAGCAGGCCCTCA 60.286 61.111 13.34 13.34 45.16 3.86
1674 2251 3.528370 ATCCCGGACGCGAGGAAG 61.528 66.667 15.93 0.00 32.26 3.46
1893 2470 1.296056 GCGTGAAGGGCATGTACGTT 61.296 55.000 0.00 0.00 37.12 3.99
1923 2500 1.704082 CTCTACCCCTCCACCCTCA 59.296 63.158 0.00 0.00 0.00 3.86
2041 2620 8.516234 CGGCTGTAGTGAAGTTCTATATATCTT 58.484 37.037 4.17 0.00 0.00 2.40
2065 2644 1.269166 GAGAACATGAGCACGTACGG 58.731 55.000 21.06 9.73 0.00 4.02
2070 2652 3.860717 TGCGAGAACATGAGCACG 58.139 55.556 0.00 2.32 34.39 5.34
2084 2666 5.351465 AGTGAGAAACCACATTATTAGTGCG 59.649 40.000 0.00 0.00 39.42 5.34
2143 2725 9.896645 ATATACATATTCATAAGGGAGCACAAG 57.103 33.333 0.00 0.00 0.00 3.16
2168 2750 5.003804 CCTTAAGGTACAAGCACAGAACAT 58.996 41.667 13.83 0.00 0.00 2.71
2170 2752 3.188667 GCCTTAAGGTACAAGCACAGAAC 59.811 47.826 22.55 0.00 37.57 3.01
2171 2753 3.408634 GCCTTAAGGTACAAGCACAGAA 58.591 45.455 22.55 0.00 37.57 3.02
2173 2755 1.732259 CGCCTTAAGGTACAAGCACAG 59.268 52.381 22.55 0.00 37.57 3.66
2174 2756 1.071071 ACGCCTTAAGGTACAAGCACA 59.929 47.619 22.55 0.00 37.57 4.57
2175 2757 1.804601 ACGCCTTAAGGTACAAGCAC 58.195 50.000 22.55 2.58 37.57 4.40
2176 2758 2.147958 CAACGCCTTAAGGTACAAGCA 58.852 47.619 22.55 0.00 37.57 3.91
2177 2759 2.148768 ACAACGCCTTAAGGTACAAGC 58.851 47.619 22.55 6.25 37.57 4.01
2178 2760 4.533222 CAAACAACGCCTTAAGGTACAAG 58.467 43.478 22.55 11.51 37.57 3.16
2179 2761 3.315749 CCAAACAACGCCTTAAGGTACAA 59.684 43.478 22.55 0.00 37.57 2.41
2180 2762 2.879646 CCAAACAACGCCTTAAGGTACA 59.120 45.455 22.55 0.00 37.57 2.90
2181 2763 3.140623 TCCAAACAACGCCTTAAGGTAC 58.859 45.455 22.55 6.23 37.57 3.34
2182 2764 3.488778 TCCAAACAACGCCTTAAGGTA 57.511 42.857 22.55 0.00 37.57 3.08
2183 2765 2.351706 TCCAAACAACGCCTTAAGGT 57.648 45.000 22.55 0.62 37.57 3.50
2184 2766 4.698304 TCTTATCCAAACAACGCCTTAAGG 59.302 41.667 17.81 17.81 38.53 2.69
2185 2767 5.642063 TCTCTTATCCAAACAACGCCTTAAG 59.358 40.000 0.00 0.00 0.00 1.85
2186 2768 5.553123 TCTCTTATCCAAACAACGCCTTAA 58.447 37.500 0.00 0.00 0.00 1.85
2187 2769 5.155278 TCTCTTATCCAAACAACGCCTTA 57.845 39.130 0.00 0.00 0.00 2.69
2188 2770 4.015872 TCTCTTATCCAAACAACGCCTT 57.984 40.909 0.00 0.00 0.00 4.35
2189 2771 3.695830 TCTCTTATCCAAACAACGCCT 57.304 42.857 0.00 0.00 0.00 5.52
2190 2772 4.759516 TTTCTCTTATCCAAACAACGCC 57.240 40.909 0.00 0.00 0.00 5.68
2191 2773 9.997482 TTTATATTTCTCTTATCCAAACAACGC 57.003 29.630 0.00 0.00 0.00 4.84
2211 2793 8.827677 GGCTTTTGTAGATCGTGTTCTTTATAT 58.172 33.333 0.00 0.00 0.00 0.86
2212 2794 7.820386 TGGCTTTTGTAGATCGTGTTCTTTATA 59.180 33.333 0.00 0.00 0.00 0.98
2213 2795 6.653320 TGGCTTTTGTAGATCGTGTTCTTTAT 59.347 34.615 0.00 0.00 0.00 1.40
2214 2796 5.992829 TGGCTTTTGTAGATCGTGTTCTTTA 59.007 36.000 0.00 0.00 0.00 1.85
2215 2797 4.819630 TGGCTTTTGTAGATCGTGTTCTTT 59.180 37.500 0.00 0.00 0.00 2.52
2216 2798 4.385825 TGGCTTTTGTAGATCGTGTTCTT 58.614 39.130 0.00 0.00 0.00 2.52
2217 2799 4.002906 TGGCTTTTGTAGATCGTGTTCT 57.997 40.909 0.00 0.00 0.00 3.01
2218 2800 4.378459 CCTTGGCTTTTGTAGATCGTGTTC 60.378 45.833 0.00 0.00 0.00 3.18
2219 2801 3.502211 CCTTGGCTTTTGTAGATCGTGTT 59.498 43.478 0.00 0.00 0.00 3.32
2220 2802 3.074412 CCTTGGCTTTTGTAGATCGTGT 58.926 45.455 0.00 0.00 0.00 4.49
2221 2803 3.334691 TCCTTGGCTTTTGTAGATCGTG 58.665 45.455 0.00 0.00 0.00 4.35
2222 2804 3.695830 TCCTTGGCTTTTGTAGATCGT 57.304 42.857 0.00 0.00 0.00 3.73
2223 2805 4.455877 AGTTTCCTTGGCTTTTGTAGATCG 59.544 41.667 0.00 0.00 0.00 3.69
2224 2806 5.703876 CAGTTTCCTTGGCTTTTGTAGATC 58.296 41.667 0.00 0.00 0.00 2.75
2225 2807 4.021981 GCAGTTTCCTTGGCTTTTGTAGAT 60.022 41.667 0.00 0.00 0.00 1.98
2226 2808 3.317993 GCAGTTTCCTTGGCTTTTGTAGA 59.682 43.478 0.00 0.00 0.00 2.59
2227 2809 3.552890 GGCAGTTTCCTTGGCTTTTGTAG 60.553 47.826 0.00 0.00 38.03 2.74
2228 2810 2.364002 GGCAGTTTCCTTGGCTTTTGTA 59.636 45.455 0.00 0.00 38.03 2.41
2229 2811 1.138859 GGCAGTTTCCTTGGCTTTTGT 59.861 47.619 0.00 0.00 38.03 2.83
2230 2812 1.869774 GGCAGTTTCCTTGGCTTTTG 58.130 50.000 0.00 0.00 38.03 2.44
2235 2817 0.888619 GGTTAGGCAGTTTCCTTGGC 59.111 55.000 0.00 0.00 41.05 4.52
2236 2818 1.165270 CGGTTAGGCAGTTTCCTTGG 58.835 55.000 0.00 0.00 37.66 3.61
2237 2819 1.892209 ACGGTTAGGCAGTTTCCTTG 58.108 50.000 0.00 0.00 37.66 3.61
2238 2820 2.369532 TGTACGGTTAGGCAGTTTCCTT 59.630 45.455 0.00 0.00 37.66 3.36
2239 2821 1.972795 TGTACGGTTAGGCAGTTTCCT 59.027 47.619 0.00 0.00 40.21 3.36
2240 2822 2.460757 TGTACGGTTAGGCAGTTTCC 57.539 50.000 0.00 0.00 0.00 3.13
2241 2823 4.816786 TTTTGTACGGTTAGGCAGTTTC 57.183 40.909 0.00 0.00 0.00 2.78
2242 2824 5.561339 CGATTTTTGTACGGTTAGGCAGTTT 60.561 40.000 0.00 0.00 0.00 2.66
2243 2825 4.083696 CGATTTTTGTACGGTTAGGCAGTT 60.084 41.667 0.00 0.00 0.00 3.16
2244 2826 3.434299 CGATTTTTGTACGGTTAGGCAGT 59.566 43.478 0.00 0.00 0.00 4.40
2245 2827 3.434299 ACGATTTTTGTACGGTTAGGCAG 59.566 43.478 0.00 0.00 0.00 4.85
2246 2828 3.401182 ACGATTTTTGTACGGTTAGGCA 58.599 40.909 0.00 0.00 0.00 4.75
2247 2829 3.482436 CGACGATTTTTGTACGGTTAGGC 60.482 47.826 0.00 0.00 0.00 3.93
2248 2830 3.674753 ACGACGATTTTTGTACGGTTAGG 59.325 43.478 0.00 0.00 0.00 2.69
2249 2831 4.891277 ACGACGATTTTTGTACGGTTAG 57.109 40.909 0.00 0.00 0.00 2.34
2250 2832 5.117897 GGTAACGACGATTTTTGTACGGTTA 59.882 40.000 0.00 0.00 0.00 2.85
2251 2833 4.084589 GGTAACGACGATTTTTGTACGGTT 60.085 41.667 0.00 0.00 0.00 4.44
2252 2834 3.428534 GGTAACGACGATTTTTGTACGGT 59.571 43.478 0.00 0.00 0.00 4.83
2253 2835 3.977536 GGTAACGACGATTTTTGTACGG 58.022 45.455 0.00 0.00 0.00 4.02
2269 2851 4.968181 GCAAAGACAAAAGAACTCGGTAAC 59.032 41.667 0.00 0.00 0.00 2.50
2270 2852 4.035909 GGCAAAGACAAAAGAACTCGGTAA 59.964 41.667 0.00 0.00 0.00 2.85
2271 2853 3.562557 GGCAAAGACAAAAGAACTCGGTA 59.437 43.478 0.00 0.00 0.00 4.02
2272 2854 2.357952 GGCAAAGACAAAAGAACTCGGT 59.642 45.455 0.00 0.00 0.00 4.69
2273 2855 2.602217 CGGCAAAGACAAAAGAACTCGG 60.602 50.000 0.00 0.00 0.00 4.63
2274 2856 2.286833 TCGGCAAAGACAAAAGAACTCG 59.713 45.455 0.00 0.00 0.00 4.18
2275 2857 3.312697 ACTCGGCAAAGACAAAAGAACTC 59.687 43.478 0.00 0.00 0.00 3.01
2276 2858 3.279434 ACTCGGCAAAGACAAAAGAACT 58.721 40.909 0.00 0.00 0.00 3.01
2277 2859 3.692791 ACTCGGCAAAGACAAAAGAAC 57.307 42.857 0.00 0.00 0.00 3.01
2278 2860 4.193090 TGTACTCGGCAAAGACAAAAGAA 58.807 39.130 0.00 0.00 0.00 2.52
2279 2861 3.799366 TGTACTCGGCAAAGACAAAAGA 58.201 40.909 0.00 0.00 0.00 2.52
2280 2862 4.272504 TCTTGTACTCGGCAAAGACAAAAG 59.727 41.667 0.00 0.00 30.14 2.27
2281 2863 4.193090 TCTTGTACTCGGCAAAGACAAAA 58.807 39.130 0.00 0.00 30.14 2.44
2282 2864 3.799366 TCTTGTACTCGGCAAAGACAAA 58.201 40.909 0.00 0.00 30.14 2.83
2283 2865 3.462483 TCTTGTACTCGGCAAAGACAA 57.538 42.857 0.00 0.00 0.00 3.18
2284 2866 3.128349 GTTCTTGTACTCGGCAAAGACA 58.872 45.455 0.00 0.00 0.00 3.41
2285 2867 3.128349 TGTTCTTGTACTCGGCAAAGAC 58.872 45.455 0.00 0.00 0.00 3.01
2286 2868 3.462483 TGTTCTTGTACTCGGCAAAGA 57.538 42.857 0.00 0.00 0.00 2.52
2287 2869 3.120199 CCATGTTCTTGTACTCGGCAAAG 60.120 47.826 0.00 0.00 0.00 2.77
2288 2870 2.811431 CCATGTTCTTGTACTCGGCAAA 59.189 45.455 0.00 0.00 0.00 3.68
2289 2871 2.224426 ACCATGTTCTTGTACTCGGCAA 60.224 45.455 0.00 0.00 0.00 4.52
2290 2872 1.346395 ACCATGTTCTTGTACTCGGCA 59.654 47.619 0.00 0.00 0.00 5.69
2291 2873 2.094762 ACCATGTTCTTGTACTCGGC 57.905 50.000 0.00 0.00 0.00 5.54
2292 2874 5.457799 CGTTATACCATGTTCTTGTACTCGG 59.542 44.000 0.00 0.00 0.00 4.63
2293 2875 5.457799 CCGTTATACCATGTTCTTGTACTCG 59.542 44.000 0.00 0.00 0.00 4.18
2294 2876 5.233689 GCCGTTATACCATGTTCTTGTACTC 59.766 44.000 0.00 0.00 0.00 2.59
2295 2877 5.114081 GCCGTTATACCATGTTCTTGTACT 58.886 41.667 0.00 0.00 0.00 2.73
2296 2878 4.871557 TGCCGTTATACCATGTTCTTGTAC 59.128 41.667 0.00 0.00 0.00 2.90
2297 2879 5.087391 TGCCGTTATACCATGTTCTTGTA 57.913 39.130 0.00 0.00 0.00 2.41
2298 2880 3.945346 TGCCGTTATACCATGTTCTTGT 58.055 40.909 0.00 0.00 0.00 3.16
2299 2881 4.955925 TTGCCGTTATACCATGTTCTTG 57.044 40.909 0.00 0.00 0.00 3.02
2300 2882 5.708230 TCTTTTGCCGTTATACCATGTTCTT 59.292 36.000 0.00 0.00 0.00 2.52
2301 2883 5.123344 GTCTTTTGCCGTTATACCATGTTCT 59.877 40.000 0.00 0.00 0.00 3.01
2302 2884 5.106475 TGTCTTTTGCCGTTATACCATGTTC 60.106 40.000 0.00 0.00 0.00 3.18
2303 2885 4.762765 TGTCTTTTGCCGTTATACCATGTT 59.237 37.500 0.00 0.00 0.00 2.71
2304 2886 4.328536 TGTCTTTTGCCGTTATACCATGT 58.671 39.130 0.00 0.00 0.00 3.21
2305 2887 4.955925 TGTCTTTTGCCGTTATACCATG 57.044 40.909 0.00 0.00 0.00 3.66
2306 2888 5.437060 AGATGTCTTTTGCCGTTATACCAT 58.563 37.500 0.00 0.00 0.00 3.55
2307 2889 4.839121 AGATGTCTTTTGCCGTTATACCA 58.161 39.130 0.00 0.00 0.00 3.25
2308 2890 6.511282 GCTTAGATGTCTTTTGCCGTTATACC 60.511 42.308 0.00 0.00 0.00 2.73
2309 2891 6.419771 GCTTAGATGTCTTTTGCCGTTATAC 58.580 40.000 0.00 0.00 0.00 1.47
2310 2892 5.526111 GGCTTAGATGTCTTTTGCCGTTATA 59.474 40.000 0.00 0.00 0.00 0.98
2311 2893 4.335594 GGCTTAGATGTCTTTTGCCGTTAT 59.664 41.667 0.00 0.00 0.00 1.89
2312 2894 3.687698 GGCTTAGATGTCTTTTGCCGTTA 59.312 43.478 0.00 0.00 0.00 3.18
2313 2895 2.488153 GGCTTAGATGTCTTTTGCCGTT 59.512 45.455 0.00 0.00 0.00 4.44
2314 2896 2.084546 GGCTTAGATGTCTTTTGCCGT 58.915 47.619 0.00 0.00 0.00 5.68
2315 2897 1.062587 CGGCTTAGATGTCTTTTGCCG 59.937 52.381 19.95 19.95 44.36 5.69
2316 2898 2.352960 CTCGGCTTAGATGTCTTTTGCC 59.647 50.000 0.00 0.00 33.89 4.52
2317 2899 3.003480 ACTCGGCTTAGATGTCTTTTGC 58.997 45.455 0.00 0.00 0.00 3.68
2318 2900 5.168569 TGTACTCGGCTTAGATGTCTTTTG 58.831 41.667 0.00 0.00 0.00 2.44
2319 2901 5.401531 TGTACTCGGCTTAGATGTCTTTT 57.598 39.130 0.00 0.00 0.00 2.27
2320 2902 5.047235 ACTTGTACTCGGCTTAGATGTCTTT 60.047 40.000 0.00 0.00 0.00 2.52
2321 2903 4.463186 ACTTGTACTCGGCTTAGATGTCTT 59.537 41.667 0.00 0.00 0.00 3.01
2322 2904 4.017808 ACTTGTACTCGGCTTAGATGTCT 58.982 43.478 0.00 0.00 0.00 3.41
2323 2905 4.096682 AGACTTGTACTCGGCTTAGATGTC 59.903 45.833 0.00 0.00 0.00 3.06
2324 2906 4.017808 AGACTTGTACTCGGCTTAGATGT 58.982 43.478 0.00 0.00 0.00 3.06
2325 2907 4.096532 TGAGACTTGTACTCGGCTTAGATG 59.903 45.833 0.00 0.00 37.22 2.90
2326 2908 4.270834 TGAGACTTGTACTCGGCTTAGAT 58.729 43.478 0.00 0.00 37.22 1.98
2327 2909 3.682696 TGAGACTTGTACTCGGCTTAGA 58.317 45.455 0.00 0.00 37.22 2.10
2328 2910 4.022464 CTGAGACTTGTACTCGGCTTAG 57.978 50.000 0.00 0.00 37.22 2.18
2333 2915 1.269723 TGTGCTGAGACTTGTACTCGG 59.730 52.381 0.00 0.00 41.89 4.63
2334 2916 2.287608 TGTGTGCTGAGACTTGTACTCG 60.288 50.000 0.00 0.00 37.22 4.18
2335 2917 3.053455 GTGTGTGCTGAGACTTGTACTC 58.947 50.000 0.00 0.00 35.26 2.59
2336 2918 2.695666 AGTGTGTGCTGAGACTTGTACT 59.304 45.455 0.00 0.00 0.00 2.73
2337 2919 3.099267 AGTGTGTGCTGAGACTTGTAC 57.901 47.619 0.00 0.00 0.00 2.90
2338 2920 4.522789 TCATAGTGTGTGCTGAGACTTGTA 59.477 41.667 0.00 0.00 0.00 2.41
2339 2921 3.321968 TCATAGTGTGTGCTGAGACTTGT 59.678 43.478 0.00 0.00 0.00 3.16
2340 2922 3.677121 GTCATAGTGTGTGCTGAGACTTG 59.323 47.826 0.00 0.00 0.00 3.16
2341 2923 3.321968 TGTCATAGTGTGTGCTGAGACTT 59.678 43.478 0.00 0.00 0.00 3.01
2342 2924 2.893489 TGTCATAGTGTGTGCTGAGACT 59.107 45.455 0.00 0.00 0.00 3.24
2343 2925 2.989840 GTGTCATAGTGTGTGCTGAGAC 59.010 50.000 0.00 0.00 0.00 3.36
2344 2926 2.351738 CGTGTCATAGTGTGTGCTGAGA 60.352 50.000 0.00 0.00 0.00 3.27
2345 2927 1.988467 CGTGTCATAGTGTGTGCTGAG 59.012 52.381 0.00 0.00 0.00 3.35
2346 2928 1.336795 CCGTGTCATAGTGTGTGCTGA 60.337 52.381 0.00 0.00 0.00 4.26
2347 2929 1.070821 CCGTGTCATAGTGTGTGCTG 58.929 55.000 0.00 0.00 0.00 4.41
2348 2930 0.670546 GCCGTGTCATAGTGTGTGCT 60.671 55.000 0.00 0.00 0.00 4.40
2349 2931 0.948623 TGCCGTGTCATAGTGTGTGC 60.949 55.000 0.00 0.00 0.00 4.57
2350 2932 0.790207 GTGCCGTGTCATAGTGTGTG 59.210 55.000 0.00 0.00 0.00 3.82
2351 2933 0.391228 TGTGCCGTGTCATAGTGTGT 59.609 50.000 0.00 0.00 0.00 3.72
2352 2934 1.394572 CATGTGCCGTGTCATAGTGTG 59.605 52.381 0.00 0.00 0.00 3.82
2353 2935 1.675714 CCATGTGCCGTGTCATAGTGT 60.676 52.381 0.00 0.00 0.00 3.55
2354 2936 1.009078 CCATGTGCCGTGTCATAGTG 58.991 55.000 0.00 0.00 0.00 2.74
2355 2937 0.107703 CCCATGTGCCGTGTCATAGT 60.108 55.000 0.00 0.00 0.00 2.12
2356 2938 0.177836 TCCCATGTGCCGTGTCATAG 59.822 55.000 0.00 0.00 0.00 2.23
2357 2939 0.615850 TTCCCATGTGCCGTGTCATA 59.384 50.000 0.00 0.00 0.00 2.15
2358 2940 0.677731 CTTCCCATGTGCCGTGTCAT 60.678 55.000 0.00 0.00 0.00 3.06
2359 2941 1.302431 CTTCCCATGTGCCGTGTCA 60.302 57.895 0.00 0.00 0.00 3.58
2360 2942 2.690778 GCTTCCCATGTGCCGTGTC 61.691 63.158 0.00 0.00 0.00 3.67
2361 2943 2.672996 GCTTCCCATGTGCCGTGT 60.673 61.111 0.00 0.00 0.00 4.49
2362 2944 2.360350 AGCTTCCCATGTGCCGTG 60.360 61.111 0.00 0.00 0.00 4.94
2363 2945 1.264749 TAGAGCTTCCCATGTGCCGT 61.265 55.000 0.00 0.00 0.00 5.68
2364 2946 0.811616 GTAGAGCTTCCCATGTGCCG 60.812 60.000 0.00 0.00 0.00 5.69
2365 2947 0.464554 GGTAGAGCTTCCCATGTGCC 60.465 60.000 0.00 0.00 0.00 5.01
2366 2948 0.811616 CGGTAGAGCTTCCCATGTGC 60.812 60.000 0.00 0.00 0.00 4.57
2367 2949 0.824109 TCGGTAGAGCTTCCCATGTG 59.176 55.000 0.00 0.00 0.00 3.21
2368 2950 1.115467 CTCGGTAGAGCTTCCCATGT 58.885 55.000 0.00 0.00 37.73 3.21
2369 2951 3.976339 CTCGGTAGAGCTTCCCATG 57.024 57.895 0.00 0.00 37.73 3.66
2379 2961 2.439701 CCGGCAGGACTCGGTAGA 60.440 66.667 0.00 0.00 41.23 2.59
2384 2966 0.742505 TGTATAACCGGCAGGACTCG 59.257 55.000 10.86 0.00 41.02 4.18
2385 2967 1.755380 AGTGTATAACCGGCAGGACTC 59.245 52.381 10.86 0.00 41.02 3.36
2386 2968 1.755380 GAGTGTATAACCGGCAGGACT 59.245 52.381 10.86 0.33 41.02 3.85
2387 2969 1.535437 CGAGTGTATAACCGGCAGGAC 60.535 57.143 10.86 0.00 41.02 3.85
2388 2970 0.742505 CGAGTGTATAACCGGCAGGA 59.257 55.000 10.86 0.00 41.02 3.86
2389 2971 0.249322 CCGAGTGTATAACCGGCAGG 60.249 60.000 0.00 0.00 45.13 4.85
2390 2972 3.267900 CCGAGTGTATAACCGGCAG 57.732 57.895 0.00 0.00 36.33 4.85
2393 2975 1.662122 GTTTGCCGAGTGTATAACCGG 59.338 52.381 0.00 0.00 42.30 5.28
2394 2976 2.339418 TGTTTGCCGAGTGTATAACCG 58.661 47.619 0.00 0.00 0.00 4.44
2395 2977 6.425577 TTTATGTTTGCCGAGTGTATAACC 57.574 37.500 0.00 0.00 0.00 2.85
2396 2978 6.483687 CCTTTATGTTTGCCGAGTGTATAAC 58.516 40.000 0.00 0.00 0.00 1.89
2397 2979 5.065474 GCCTTTATGTTTGCCGAGTGTATAA 59.935 40.000 0.00 0.00 0.00 0.98
2398 2980 4.573201 GCCTTTATGTTTGCCGAGTGTATA 59.427 41.667 0.00 0.00 0.00 1.47
2399 2981 3.377172 GCCTTTATGTTTGCCGAGTGTAT 59.623 43.478 0.00 0.00 0.00 2.29
2400 2982 2.745281 GCCTTTATGTTTGCCGAGTGTA 59.255 45.455 0.00 0.00 0.00 2.90
2401 2983 1.539827 GCCTTTATGTTTGCCGAGTGT 59.460 47.619 0.00 0.00 0.00 3.55
2402 2984 1.539388 TGCCTTTATGTTTGCCGAGTG 59.461 47.619 0.00 0.00 0.00 3.51
2403 2985 1.539827 GTGCCTTTATGTTTGCCGAGT 59.460 47.619 0.00 0.00 0.00 4.18
2404 2986 1.812571 AGTGCCTTTATGTTTGCCGAG 59.187 47.619 0.00 0.00 0.00 4.63
2405 2987 1.810151 GAGTGCCTTTATGTTTGCCGA 59.190 47.619 0.00 0.00 0.00 5.54
2406 2988 1.465689 CGAGTGCCTTTATGTTTGCCG 60.466 52.381 0.00 0.00 0.00 5.69
2407 2989 1.135402 CCGAGTGCCTTTATGTTTGCC 60.135 52.381 0.00 0.00 0.00 4.52
2408 2990 1.732405 GCCGAGTGCCTTTATGTTTGC 60.732 52.381 0.00 0.00 0.00 3.68
2409 2991 1.812571 AGCCGAGTGCCTTTATGTTTG 59.187 47.619 0.00 0.00 42.71 2.93
2410 2992 2.200373 AGCCGAGTGCCTTTATGTTT 57.800 45.000 0.00 0.00 42.71 2.83
2411 2993 2.200373 AAGCCGAGTGCCTTTATGTT 57.800 45.000 0.00 0.00 42.71 2.71
2412 2994 3.206150 CATAAGCCGAGTGCCTTTATGT 58.794 45.455 0.00 0.00 42.71 2.29
2413 2995 2.031682 GCATAAGCCGAGTGCCTTTATG 60.032 50.000 0.00 0.00 42.71 1.90
2414 2996 2.222027 GCATAAGCCGAGTGCCTTTAT 58.778 47.619 0.00 0.00 42.71 1.40
2415 2997 1.065782 TGCATAAGCCGAGTGCCTTTA 60.066 47.619 0.00 0.00 42.71 1.85
2416 2998 0.322456 TGCATAAGCCGAGTGCCTTT 60.322 50.000 0.00 0.00 42.71 3.11
2417 2999 0.107017 ATGCATAAGCCGAGTGCCTT 60.107 50.000 0.00 0.00 42.71 4.35
2418 3000 0.758734 TATGCATAAGCCGAGTGCCT 59.241 50.000 3.27 0.00 42.71 4.75
2419 3001 1.151668 CTATGCATAAGCCGAGTGCC 58.848 55.000 8.00 0.00 42.71 5.01
2420 3002 1.871080 ACTATGCATAAGCCGAGTGC 58.129 50.000 8.00 0.00 41.13 4.40
2421 3003 4.800993 GCTATACTATGCATAAGCCGAGTG 59.199 45.833 14.61 1.20 41.13 3.51
2422 3004 4.438880 CGCTATACTATGCATAAGCCGAGT 60.439 45.833 18.14 11.42 41.13 4.18
2423 3005 4.038361 CGCTATACTATGCATAAGCCGAG 58.962 47.826 18.14 6.47 41.13 4.63
2424 3006 3.692593 TCGCTATACTATGCATAAGCCGA 59.307 43.478 18.14 15.66 41.13 5.54
2425 3007 4.028852 TCGCTATACTATGCATAAGCCG 57.971 45.455 18.14 14.17 41.13 5.52
2426 3008 5.277058 GCATTCGCTATACTATGCATAAGCC 60.277 44.000 18.14 4.71 42.18 4.35
2427 3009 5.277058 GGCATTCGCTATACTATGCATAAGC 60.277 44.000 15.28 15.28 43.89 3.09
2428 3010 5.235186 GGGCATTCGCTATACTATGCATAAG 59.765 44.000 8.00 3.37 43.89 1.73
2429 3011 5.104941 AGGGCATTCGCTATACTATGCATAA 60.105 40.000 8.00 0.00 43.89 1.90
2430 3012 4.405680 AGGGCATTCGCTATACTATGCATA 59.594 41.667 6.20 6.20 43.89 3.14
2431 3013 3.198635 AGGGCATTCGCTATACTATGCAT 59.801 43.478 3.79 3.79 43.89 3.96
2432 3014 2.567169 AGGGCATTCGCTATACTATGCA 59.433 45.455 0.00 0.00 43.89 3.96
2433 3015 2.932614 CAGGGCATTCGCTATACTATGC 59.067 50.000 0.00 0.00 41.94 3.14
2434 3016 4.193826 ACAGGGCATTCGCTATACTATG 57.806 45.455 0.00 0.00 38.60 2.23
2435 3017 5.262009 TCTACAGGGCATTCGCTATACTAT 58.738 41.667 0.00 0.00 38.60 2.12
2436 3018 4.659115 TCTACAGGGCATTCGCTATACTA 58.341 43.478 0.00 0.00 38.60 1.82
2437 3019 3.497332 TCTACAGGGCATTCGCTATACT 58.503 45.455 0.00 0.00 38.60 2.12
2438 3020 3.367498 CCTCTACAGGGCATTCGCTATAC 60.367 52.174 0.00 0.00 35.89 1.47
2439 3021 2.826128 CCTCTACAGGGCATTCGCTATA 59.174 50.000 0.00 0.00 35.89 1.31
2440 3022 1.620819 CCTCTACAGGGCATTCGCTAT 59.379 52.381 0.00 0.00 35.89 2.97
2441 3023 1.040646 CCTCTACAGGGCATTCGCTA 58.959 55.000 0.00 0.00 35.89 4.26
2442 3024 1.826024 CCTCTACAGGGCATTCGCT 59.174 57.895 0.00 0.00 35.89 4.93
2443 3025 4.445699 CCTCTACAGGGCATTCGC 57.554 61.111 0.00 0.00 35.89 4.70
2450 3032 3.470888 CCGGGTGCCTCTACAGGG 61.471 72.222 0.00 0.00 40.75 4.45
2451 3033 4.162690 GCCGGGTGCCTCTACAGG 62.163 72.222 2.18 0.00 43.82 4.00
2452 3034 2.463589 TTTGCCGGGTGCCTCTACAG 62.464 60.000 2.18 0.00 40.16 2.74
2453 3035 1.847798 ATTTGCCGGGTGCCTCTACA 61.848 55.000 2.18 0.00 40.16 2.74
2454 3036 0.179468 TATTTGCCGGGTGCCTCTAC 59.821 55.000 2.18 0.00 40.16 2.59
2455 3037 0.468226 CTATTTGCCGGGTGCCTCTA 59.532 55.000 2.18 0.00 40.16 2.43
2456 3038 1.224592 CTATTTGCCGGGTGCCTCT 59.775 57.895 2.18 0.00 40.16 3.69
2457 3039 1.823899 CCTATTTGCCGGGTGCCTC 60.824 63.158 2.18 0.00 40.16 4.70
2458 3040 2.270874 CTCCTATTTGCCGGGTGCCT 62.271 60.000 2.18 0.00 40.16 4.75
2459 3041 1.823899 CTCCTATTTGCCGGGTGCC 60.824 63.158 2.18 0.00 40.16 5.01
2460 3042 2.481471 GCTCCTATTTGCCGGGTGC 61.481 63.158 2.18 0.00 41.77 5.01
2461 3043 1.823899 GGCTCCTATTTGCCGGGTG 60.824 63.158 2.18 0.00 39.71 4.61
2462 3044 2.595655 GGCTCCTATTTGCCGGGT 59.404 61.111 2.18 0.00 39.71 5.28
2467 3049 2.098293 CCACGTGGCTCCTATTTGC 58.902 57.895 24.02 0.00 0.00 3.68
2491 3073 1.571460 GACAGTCAGCTGCAAACGG 59.429 57.895 9.47 5.72 46.30 4.44
2492 3074 0.882042 AGGACAGTCAGCTGCAAACG 60.882 55.000 9.47 1.96 46.30 3.60
2493 3075 2.169832 TAGGACAGTCAGCTGCAAAC 57.830 50.000 9.47 1.80 46.30 2.93
2494 3076 2.302733 TCATAGGACAGTCAGCTGCAAA 59.697 45.455 9.47 0.00 46.30 3.68
2495 3077 1.901833 TCATAGGACAGTCAGCTGCAA 59.098 47.619 9.47 0.00 46.30 4.08
2496 3078 1.205655 GTCATAGGACAGTCAGCTGCA 59.794 52.381 9.47 0.00 46.30 4.41
2497 3079 1.933247 GTCATAGGACAGTCAGCTGC 58.067 55.000 9.47 4.26 46.30 5.25
2507 3089 0.905357 ACTGCCCACTGTCATAGGAC 59.095 55.000 0.00 0.00 44.57 3.85
2508 3090 0.904649 CACTGCCCACTGTCATAGGA 59.095 55.000 0.00 0.00 0.00 2.94
2509 3091 0.615331 ACACTGCCCACTGTCATAGG 59.385 55.000 0.00 0.00 0.00 2.57
2510 3092 1.737029 CGACACTGCCCACTGTCATAG 60.737 57.143 8.19 0.00 37.27 2.23
2511 3093 0.246360 CGACACTGCCCACTGTCATA 59.754 55.000 8.19 0.00 37.27 2.15
2512 3094 1.004560 CGACACTGCCCACTGTCAT 60.005 57.895 8.19 0.00 37.27 3.06
2513 3095 2.421314 CGACACTGCCCACTGTCA 59.579 61.111 8.19 0.00 37.27 3.58
2514 3096 1.956170 CACGACACTGCCCACTGTC 60.956 63.158 0.00 0.00 34.57 3.51
2515 3097 2.108976 CACGACACTGCCCACTGT 59.891 61.111 0.00 0.00 0.00 3.55
2516 3098 2.094757 TACCACGACACTGCCCACTG 62.095 60.000 0.00 0.00 0.00 3.66
2517 3099 1.835267 TACCACGACACTGCCCACT 60.835 57.895 0.00 0.00 0.00 4.00
2557 3140 2.795291 TGCCTCTCCATACCTACCAT 57.205 50.000 0.00 0.00 0.00 3.55
2558 3141 2.023404 TCTTGCCTCTCCATACCTACCA 60.023 50.000 0.00 0.00 0.00 3.25
2668 3252 2.626266 ACATATAATCCAGTCGACCGCA 59.374 45.455 13.01 0.00 0.00 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.