Multiple sequence alignment - TraesCS7B01G092000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G092000 chr7B 100.000 3170 0 0 1 3170 105511637 105508468 0.000000e+00 5854.0
1 TraesCS7B01G092000 chr7B 87.689 991 98 13 1035 2016 105520649 105519674 0.000000e+00 1133.0
2 TraesCS7B01G092000 chr7B 83.333 1104 137 28 928 2016 104563556 104564627 0.000000e+00 976.0
3 TraesCS7B01G092000 chr7B 88.601 579 47 13 1 569 180685895 180685326 0.000000e+00 686.0
4 TraesCS7B01G092000 chr7B 91.542 201 11 3 623 823 658409122 658408928 4.030000e-69 272.0
5 TraesCS7B01G092000 chr7B 90.955 199 12 3 623 821 175201839 175202031 2.420000e-66 263.0
6 TraesCS7B01G092000 chr7B 82.270 141 20 3 2565 2705 692407228 692407363 2.000000e-22 117.0
7 TraesCS7B01G092000 chr7B 96.226 53 2 0 574 626 105511116 105511064 1.570000e-13 87.9
8 TraesCS7B01G092000 chr7D 90.026 1564 123 19 925 2463 140311598 140310043 0.000000e+00 1993.0
9 TraesCS7B01G092000 chr7D 83.500 1103 133 29 928 2016 139306246 139307313 0.000000e+00 983.0
10 TraesCS7B01G092000 chr7D 91.741 448 20 10 2736 3170 140310027 140309584 9.720000e-170 606.0
11 TraesCS7B01G092000 chr7D 85.283 530 66 7 1490 2016 140317139 140316619 1.290000e-148 536.0
12 TraesCS7B01G092000 chr7D 87.069 348 33 6 1159 1500 140317936 140317595 1.780000e-102 383.0
13 TraesCS7B01G092000 chr7D 81.839 435 66 11 2743 3170 139307893 139308321 1.400000e-93 353.0
14 TraesCS7B01G092000 chr7D 83.284 335 38 14 843 1164 140318302 140317973 3.090000e-75 292.0
15 TraesCS7B01G092000 chr7D 80.793 328 55 5 1031 1357 55069684 55070004 1.890000e-62 250.0
16 TraesCS7B01G092000 chr7D 80.263 304 50 7 1035 1336 56293188 56292893 1.480000e-53 220.0
17 TraesCS7B01G092000 chr7D 84.135 208 22 9 627 823 98296224 98296017 1.160000e-44 191.0
18 TraesCS7B01G092000 chr7D 94.186 86 5 0 843 928 140311863 140311778 7.130000e-27 132.0
19 TraesCS7B01G092000 chr7D 89.744 78 5 2 2468 2542 441861004 441860927 2.600000e-16 97.1
20 TraesCS7B01G092000 chr7D 88.462 78 7 2 2468 2543 50723161 50723238 3.370000e-15 93.5
21 TraesCS7B01G092000 chr7A 88.769 837 75 11 1631 2463 140655696 140654875 0.000000e+00 1007.0
22 TraesCS7B01G092000 chr7A 88.387 775 62 17 841 1607 140656527 140655773 0.000000e+00 907.0
23 TraesCS7B01G092000 chr7A 82.257 1037 127 32 925 1953 139422010 139422997 0.000000e+00 843.0
24 TraesCS7B01G092000 chr7A 92.135 445 17 9 2736 3170 140654857 140654421 2.090000e-171 612.0
25 TraesCS7B01G092000 chr7A 87.978 183 13 3 2566 2739 222781687 222781869 1.150000e-49 207.0
26 TraesCS7B01G092000 chr7A 89.412 85 5 3 2469 2550 85081727 85081810 1.560000e-18 104.0
27 TraesCS7B01G092000 chr3A 88.851 583 42 18 1 570 749871353 749870781 0.000000e+00 695.0
28 TraesCS7B01G092000 chr3A 85.593 118 15 1 2623 2740 659979378 659979493 4.290000e-24 122.0
29 TraesCS7B01G092000 chr3B 88.640 581 48 13 1 570 530332971 530332398 0.000000e+00 691.0
30 TraesCS7B01G092000 chr3B 88.547 585 39 21 1 570 762593572 762594143 0.000000e+00 684.0
31 TraesCS7B01G092000 chr3B 87.709 179 13 2 2565 2742 102968073 102968243 1.930000e-47 200.0
32 TraesCS7B01G092000 chr3B 86.559 186 17 5 2565 2742 156921887 156921702 6.940000e-47 198.0
33 TraesCS7B01G092000 chr3B 92.857 70 4 1 2636 2705 201348874 201348806 2.010000e-17 100.0
34 TraesCS7B01G092000 chr3B 96.154 52 2 0 1 52 188487170 188487221 5.630000e-13 86.1
35 TraesCS7B01G092000 chr3B 94.643 56 2 1 574 629 804315355 804315409 5.630000e-13 86.1
36 TraesCS7B01G092000 chr3B 89.394 66 2 4 574 635 680746408 680746472 9.430000e-11 78.7
37 TraesCS7B01G092000 chr2B 89.655 551 38 14 32 569 676940205 676939661 0.000000e+00 684.0
38 TraesCS7B01G092000 chr2B 88.296 581 52 12 1 570 96148433 96147858 0.000000e+00 682.0
39 TraesCS7B01G092000 chr2B 90.323 62 2 2 576 637 96147904 96147847 9.430000e-11 78.7
40 TraesCS7B01G092000 chr1B 88.165 583 48 14 1 570 625078979 625078405 0.000000e+00 675.0
41 TraesCS7B01G092000 chr1B 87.905 587 47 13 1 570 183251924 183252503 0.000000e+00 669.0
42 TraesCS7B01G092000 chr1B 80.000 220 23 14 880 1096 489500880 489501081 3.300000e-30 143.0
43 TraesCS7B01G092000 chr1B 89.062 64 6 1 579 642 668138827 668138765 9.430000e-11 78.7
44 TraesCS7B01G092000 chr1B 87.879 66 4 3 574 636 580528617 580528553 1.220000e-09 75.0
45 TraesCS7B01G092000 chr4A 87.973 582 50 15 1 575 648750946 648750378 0.000000e+00 669.0
46 TraesCS7B01G092000 chr4A 80.734 327 55 5 1035 1360 670976678 670976359 6.790000e-62 248.0
47 TraesCS7B01G092000 chr4A 79.870 308 51 8 1035 1339 673046781 673046482 6.890000e-52 215.0
48 TraesCS7B01G092000 chr4A 84.706 85 11 1 2468 2552 598725731 598725649 2.030000e-12 84.2
49 TraesCS7B01G092000 chr4B 92.040 201 10 3 623 823 7757995 7758189 8.660000e-71 278.0
50 TraesCS7B01G092000 chr4B 91.852 135 10 1 2605 2739 96183695 96183562 1.500000e-43 187.0
51 TraesCS7B01G092000 chr4B 83.254 209 10 10 623 823 585681717 585681526 5.440000e-38 169.0
52 TraesCS7B01G092000 chr4B 86.667 120 15 1 2620 2739 304714729 304714847 7.130000e-27 132.0
53 TraesCS7B01G092000 chr2D 87.500 200 14 5 2567 2757 205891125 205891322 1.480000e-53 220.0
54 TraesCS7B01G092000 chr2D 90.789 76 5 1 2468 2543 416856644 416856717 2.010000e-17 100.0
55 TraesCS7B01G092000 chr2D 96.875 32 0 1 1093 1123 111250425 111250456 6.000000e-03 52.8
56 TraesCS7B01G092000 chr4D 94.815 135 7 0 2605 2739 227308675 227308809 8.910000e-51 211.0
57 TraesCS7B01G092000 chr4D 93.333 135 8 1 2605 2739 489778116 489777983 6.940000e-47 198.0
58 TraesCS7B01G092000 chr4D 80.272 147 15 6 931 1077 36410432 36410564 7.240000e-17 99.0
59 TraesCS7B01G092000 chr6A 87.719 171 14 6 660 823 21958594 21958424 3.230000e-45 193.0
60 TraesCS7B01G092000 chr1A 80.515 272 35 13 1035 1300 550340357 550340616 3.230000e-45 193.0
61 TraesCS7B01G092000 chr1A 83.486 218 19 12 623 823 536640957 536641174 1.500000e-43 187.0
62 TraesCS7B01G092000 chr1A 94.340 53 3 0 577 629 20041762 20041710 7.290000e-12 82.4
63 TraesCS7B01G092000 chr6D 78.328 323 50 16 1035 1353 122979176 122978870 1.160000e-44 191.0
64 TraesCS7B01G092000 chr6D 91.241 137 10 2 2605 2740 428890548 428890683 5.400000e-43 185.0
65 TraesCS7B01G092000 chr2A 83.796 216 18 11 623 821 677077972 677078187 4.170000e-44 189.0
66 TraesCS7B01G092000 chr2A 88.742 151 13 4 2605 2754 54849738 54849591 6.980000e-42 182.0
67 TraesCS7B01G092000 chr2A 90.909 121 9 2 2620 2739 12363660 12363779 9.100000e-36 161.0
68 TraesCS7B01G092000 chr2A 84.615 169 19 5 660 821 677116443 677116611 9.100000e-36 161.0
69 TraesCS7B01G092000 chr2A 86.420 81 9 1 2462 2542 714330041 714330119 1.570000e-13 87.9
70 TraesCS7B01G092000 chrUn 85.799 169 17 5 660 821 292872874 292872706 4.200000e-39 172.0
71 TraesCS7B01G092000 chr5B 90.000 120 12 0 2620 2739 127545799 127545680 4.230000e-34 156.0
72 TraesCS7B01G092000 chr6B 88.333 120 14 0 2620 2739 45873315 45873196 9.160000e-31 145.0
73 TraesCS7B01G092000 chr6B 96.000 50 2 0 574 623 32945243 32945292 7.290000e-12 82.4
74 TraesCS7B01G092000 chr6B 90.164 61 6 0 574 634 719972011 719972071 2.620000e-11 80.5
75 TraesCS7B01G092000 chr3D 88.608 79 8 1 2468 2546 459467450 459467373 9.360000e-16 95.3
76 TraesCS7B01G092000 chr3D 90.278 72 5 1 2471 2542 403700740 403700671 3.370000e-15 93.5
77 TraesCS7B01G092000 chr3D 88.312 77 7 2 2468 2543 536333245 536333170 1.210000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G092000 chr7B 105508468 105511637 3169 True 2970.950000 5854 98.113000 1 3170 2 chr7B.!!$R4 3169
1 TraesCS7B01G092000 chr7B 105519674 105520649 975 True 1133.000000 1133 87.689000 1035 2016 1 chr7B.!!$R1 981
2 TraesCS7B01G092000 chr7B 104563556 104564627 1071 False 976.000000 976 83.333000 928 2016 1 chr7B.!!$F1 1088
3 TraesCS7B01G092000 chr7B 180685326 180685895 569 True 686.000000 686 88.601000 1 569 1 chr7B.!!$R2 568
4 TraesCS7B01G092000 chr7D 140309584 140311863 2279 True 910.333333 1993 91.984333 843 3170 3 chr7D.!!$R4 2327
5 TraesCS7B01G092000 chr7D 139306246 139308321 2075 False 668.000000 983 82.669500 928 3170 2 chr7D.!!$F3 2242
6 TraesCS7B01G092000 chr7D 140316619 140318302 1683 True 403.666667 536 85.212000 843 2016 3 chr7D.!!$R5 1173
7 TraesCS7B01G092000 chr7A 139422010 139422997 987 False 843.000000 843 82.257000 925 1953 1 chr7A.!!$F2 1028
8 TraesCS7B01G092000 chr7A 140654421 140656527 2106 True 842.000000 1007 89.763667 841 3170 3 chr7A.!!$R1 2329
9 TraesCS7B01G092000 chr3A 749870781 749871353 572 True 695.000000 695 88.851000 1 570 1 chr3A.!!$R1 569
10 TraesCS7B01G092000 chr3B 530332398 530332971 573 True 691.000000 691 88.640000 1 570 1 chr3B.!!$R3 569
11 TraesCS7B01G092000 chr3B 762593572 762594143 571 False 684.000000 684 88.547000 1 570 1 chr3B.!!$F4 569
12 TraesCS7B01G092000 chr2B 676939661 676940205 544 True 684.000000 684 89.655000 32 569 1 chr2B.!!$R1 537
13 TraesCS7B01G092000 chr2B 96147847 96148433 586 True 380.350000 682 89.309500 1 637 2 chr2B.!!$R2 636
14 TraesCS7B01G092000 chr1B 625078405 625078979 574 True 675.000000 675 88.165000 1 570 1 chr1B.!!$R2 569
15 TraesCS7B01G092000 chr1B 183251924 183252503 579 False 669.000000 669 87.905000 1 570 1 chr1B.!!$F1 569
16 TraesCS7B01G092000 chr4A 648750378 648750946 568 True 669.000000 669 87.973000 1 575 1 chr4A.!!$R2 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
759 789 0.027455 CAGCAAGCGAACGACACAAA 59.973 50.0 0.00 0.0 0.0 2.83 F
793 823 0.114954 AGGCCAATCACCAACCATGT 59.885 50.0 5.01 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1629 2414 0.030908 CGTCCAGGATACGAAGCTCC 59.969 60.0 0.00 0.0 42.90 4.70 R
2604 3524 0.403655 TGGCAGCCAACCAATCACTA 59.596 50.0 13.33 0.0 33.12 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.626680 CTTTCGCGAGAGGCACGGA 62.627 63.158 18.35 0.00 43.84 4.69
61 63 0.106149 ACGTGCCTCTTTCGGAAAGT 59.894 50.000 25.21 6.87 39.52 2.66
63 65 2.028385 ACGTGCCTCTTTCGGAAAGTAT 60.028 45.455 25.21 6.31 39.52 2.12
119 123 1.152756 AGGCACGGTTTTGCTTCCT 60.153 52.632 0.00 0.00 42.56 3.36
176 181 1.676014 CGTGCCTCTTTCGGAAAGGAT 60.676 52.381 25.66 0.00 39.01 3.24
263 280 0.309612 GCGTGCCTTTTTCGGAAAGA 59.690 50.000 12.01 0.00 0.00 2.52
417 438 3.927552 GAAAGCGGTTCGAGATTTAGG 57.072 47.619 0.00 0.00 0.00 2.69
423 447 1.925185 GGTTCGAGATTTAGGTGCGTC 59.075 52.381 0.00 0.00 0.00 5.19
511 541 2.407210 CACAACGCGCCACTTGTT 59.593 55.556 5.73 0.00 0.00 2.83
522 552 0.754957 CCACTTGTTGCAACCTGGGA 60.755 55.000 26.14 4.69 0.00 4.37
571 601 9.583765 GAGTACTCCTTAATTAGTGATTTCGTT 57.416 33.333 12.13 0.00 0.00 3.85
572 602 9.583765 AGTACTCCTTAATTAGTGATTTCGTTC 57.416 33.333 0.00 0.00 0.00 3.95
573 603 7.521509 ACTCCTTAATTAGTGATTTCGTTCG 57.478 36.000 0.00 0.00 0.00 3.95
574 604 7.318141 ACTCCTTAATTAGTGATTTCGTTCGA 58.682 34.615 0.00 0.00 0.00 3.71
575 605 7.816031 ACTCCTTAATTAGTGATTTCGTTCGAA 59.184 33.333 3.47 3.47 0.00 3.71
576 606 8.537049 TCCTTAATTAGTGATTTCGTTCGAAA 57.463 30.769 19.78 19.78 38.31 3.46
577 607 8.653338 TCCTTAATTAGTGATTTCGTTCGAAAG 58.347 33.333 21.44 0.87 37.51 2.62
578 608 8.440833 CCTTAATTAGTGATTTCGTTCGAAAGT 58.559 33.333 21.44 12.17 37.51 2.66
579 609 9.807386 CTTAATTAGTGATTTCGTTCGAAAGTT 57.193 29.630 21.44 9.34 37.51 2.66
580 610 9.588774 TTAATTAGTGATTTCGTTCGAAAGTTG 57.411 29.630 21.44 0.00 37.51 3.16
581 611 4.468095 AGTGATTTCGTTCGAAAGTTGG 57.532 40.909 21.44 0.00 37.51 3.77
582 612 4.124238 AGTGATTTCGTTCGAAAGTTGGA 58.876 39.130 21.44 2.61 37.51 3.53
583 613 4.573201 AGTGATTTCGTTCGAAAGTTGGAA 59.427 37.500 21.44 2.51 37.51 3.53
584 614 5.238650 AGTGATTTCGTTCGAAAGTTGGAAT 59.761 36.000 21.44 6.89 37.51 3.01
585 615 5.339611 GTGATTTCGTTCGAAAGTTGGAATG 59.660 40.000 21.44 2.56 37.51 2.67
586 616 5.237561 TGATTTCGTTCGAAAGTTGGAATGA 59.762 36.000 21.44 6.61 38.56 2.57
587 617 5.682943 TTTCGTTCGAAAGTTGGAATGAT 57.317 34.783 14.89 0.00 39.53 2.45
588 618 4.921470 TCGTTCGAAAGTTGGAATGATC 57.079 40.909 10.88 0.00 36.45 2.92
589 619 4.566004 TCGTTCGAAAGTTGGAATGATCT 58.434 39.130 10.88 0.00 36.45 2.75
590 620 4.625742 TCGTTCGAAAGTTGGAATGATCTC 59.374 41.667 10.88 0.00 36.45 2.75
591 621 4.627467 CGTTCGAAAGTTGGAATGATCTCT 59.373 41.667 0.00 0.00 34.92 3.10
592 622 5.445142 CGTTCGAAAGTTGGAATGATCTCTG 60.445 44.000 0.00 0.00 34.92 3.35
593 623 3.935203 TCGAAAGTTGGAATGATCTCTGC 59.065 43.478 0.00 0.00 0.00 4.26
594 624 3.686241 CGAAAGTTGGAATGATCTCTGCA 59.314 43.478 0.00 0.00 0.00 4.41
595 625 4.154737 CGAAAGTTGGAATGATCTCTGCAA 59.845 41.667 0.00 0.00 0.00 4.08
596 626 5.638783 GAAAGTTGGAATGATCTCTGCAAG 58.361 41.667 0.00 0.00 0.00 4.01
597 627 3.618351 AGTTGGAATGATCTCTGCAAGG 58.382 45.455 0.00 0.00 0.00 3.61
598 628 3.265221 AGTTGGAATGATCTCTGCAAGGA 59.735 43.478 0.00 0.00 0.00 3.36
599 629 3.555527 TGGAATGATCTCTGCAAGGAG 57.444 47.619 0.00 0.00 34.88 3.69
600 630 2.842496 TGGAATGATCTCTGCAAGGAGT 59.158 45.455 3.17 0.00 35.11 3.85
601 631 4.033009 TGGAATGATCTCTGCAAGGAGTA 58.967 43.478 3.17 0.00 35.11 2.59
602 632 4.141846 TGGAATGATCTCTGCAAGGAGTAC 60.142 45.833 3.17 0.00 35.11 2.73
603 633 4.100808 GGAATGATCTCTGCAAGGAGTACT 59.899 45.833 0.00 0.00 35.11 2.73
604 634 4.935352 ATGATCTCTGCAAGGAGTACTC 57.065 45.455 14.87 14.87 35.11 2.59
621 651 8.576936 GGAGTACTCCTTAATTAGTGATTTCG 57.423 38.462 31.12 0.00 46.16 3.46
622 652 8.196103 GGAGTACTCCTTAATTAGTGATTTCGT 58.804 37.037 31.12 0.00 46.16 3.85
623 653 9.583765 GAGTACTCCTTAATTAGTGATTTCGTT 57.416 33.333 12.13 0.00 0.00 3.85
624 654 9.583765 AGTACTCCTTAATTAGTGATTTCGTTC 57.416 33.333 0.00 0.00 0.00 3.95
625 655 7.521509 ACTCCTTAATTAGTGATTTCGTTCG 57.478 36.000 0.00 0.00 0.00 3.95
626 656 7.095270 ACTCCTTAATTAGTGATTTCGTTCGT 58.905 34.615 0.00 0.00 0.00 3.85
627 657 7.601508 ACTCCTTAATTAGTGATTTCGTTCGTT 59.398 33.333 0.00 0.00 0.00 3.85
628 658 8.314143 TCCTTAATTAGTGATTTCGTTCGTTT 57.686 30.769 0.00 0.00 0.00 3.60
629 659 8.437742 TCCTTAATTAGTGATTTCGTTCGTTTC 58.562 33.333 0.00 0.00 0.00 2.78
630 660 7.691050 CCTTAATTAGTGATTTCGTTCGTTTCC 59.309 37.037 0.00 0.00 0.00 3.13
631 661 6.796705 AATTAGTGATTTCGTTCGTTTCCT 57.203 33.333 0.00 0.00 0.00 3.36
632 662 5.834239 TTAGTGATTTCGTTCGTTTCCTC 57.166 39.130 0.00 0.00 0.00 3.71
633 663 3.991367 AGTGATTTCGTTCGTTTCCTCT 58.009 40.909 0.00 0.00 0.00 3.69
634 664 3.741344 AGTGATTTCGTTCGTTTCCTCTG 59.259 43.478 0.00 0.00 0.00 3.35
635 665 3.493503 GTGATTTCGTTCGTTTCCTCTGT 59.506 43.478 0.00 0.00 0.00 3.41
636 666 4.025145 GTGATTTCGTTCGTTTCCTCTGTT 60.025 41.667 0.00 0.00 0.00 3.16
637 667 3.936902 TTTCGTTCGTTTCCTCTGTTG 57.063 42.857 0.00 0.00 0.00 3.33
638 668 2.589798 TCGTTCGTTTCCTCTGTTGT 57.410 45.000 0.00 0.00 0.00 3.32
639 669 2.896168 TCGTTCGTTTCCTCTGTTGTT 58.104 42.857 0.00 0.00 0.00 2.83
640 670 3.264104 TCGTTCGTTTCCTCTGTTGTTT 58.736 40.909 0.00 0.00 0.00 2.83
641 671 3.685756 TCGTTCGTTTCCTCTGTTGTTTT 59.314 39.130 0.00 0.00 0.00 2.43
642 672 4.154556 TCGTTCGTTTCCTCTGTTGTTTTT 59.845 37.500 0.00 0.00 0.00 1.94
643 673 5.350914 TCGTTCGTTTCCTCTGTTGTTTTTA 59.649 36.000 0.00 0.00 0.00 1.52
644 674 6.022821 CGTTCGTTTCCTCTGTTGTTTTTAA 58.977 36.000 0.00 0.00 0.00 1.52
645 675 6.523893 CGTTCGTTTCCTCTGTTGTTTTTAAA 59.476 34.615 0.00 0.00 0.00 1.52
646 676 7.219344 CGTTCGTTTCCTCTGTTGTTTTTAAAT 59.781 33.333 0.00 0.00 0.00 1.40
647 677 7.979115 TCGTTTCCTCTGTTGTTTTTAAATG 57.021 32.000 0.00 0.00 0.00 2.32
648 678 7.540299 TCGTTTCCTCTGTTGTTTTTAAATGT 58.460 30.769 0.00 0.00 0.00 2.71
649 679 8.030106 TCGTTTCCTCTGTTGTTTTTAAATGTT 58.970 29.630 0.00 0.00 0.00 2.71
650 680 8.652463 CGTTTCCTCTGTTGTTTTTAAATGTTT 58.348 29.630 0.00 0.00 0.00 2.83
651 681 9.967245 GTTTCCTCTGTTGTTTTTAAATGTTTC 57.033 29.630 0.00 0.00 0.00 2.78
652 682 9.936759 TTTCCTCTGTTGTTTTTAAATGTTTCT 57.063 25.926 0.00 0.00 0.00 2.52
655 685 8.953990 CCTCTGTTGTTTTTAAATGTTTCTACG 58.046 33.333 0.00 0.00 0.00 3.51
656 686 9.710979 CTCTGTTGTTTTTAAATGTTTCTACGA 57.289 29.630 0.00 0.00 0.00 3.43
668 698 4.960329 TGTTTCTACGAAAACACACACAC 58.040 39.130 10.08 0.00 42.58 3.82
669 699 4.451435 TGTTTCTACGAAAACACACACACA 59.549 37.500 10.08 0.00 42.58 3.72
670 700 4.587211 TTCTACGAAAACACACACACAC 57.413 40.909 0.00 0.00 0.00 3.82
671 701 2.599527 TCTACGAAAACACACACACACG 59.400 45.455 0.00 0.00 0.00 4.49
672 702 1.430479 ACGAAAACACACACACACGA 58.570 45.000 0.00 0.00 0.00 4.35
673 703 1.392168 ACGAAAACACACACACACGAG 59.608 47.619 0.00 0.00 0.00 4.18
674 704 1.810197 GAAAACACACACACACGAGC 58.190 50.000 0.00 0.00 0.00 5.03
675 705 0.450184 AAAACACACACACACGAGCC 59.550 50.000 0.00 0.00 0.00 4.70
676 706 0.675208 AAACACACACACACGAGCCA 60.675 50.000 0.00 0.00 0.00 4.75
677 707 1.089481 AACACACACACACGAGCCAG 61.089 55.000 0.00 0.00 0.00 4.85
678 708 2.588877 ACACACACACGAGCCAGC 60.589 61.111 0.00 0.00 0.00 4.85
679 709 3.349006 CACACACACGAGCCAGCC 61.349 66.667 0.00 0.00 0.00 4.85
680 710 4.626081 ACACACACGAGCCAGCCC 62.626 66.667 0.00 0.00 0.00 5.19
681 711 4.624364 CACACACGAGCCAGCCCA 62.624 66.667 0.00 0.00 0.00 5.36
682 712 3.872603 ACACACGAGCCAGCCCAA 61.873 61.111 0.00 0.00 0.00 4.12
683 713 2.594303 CACACGAGCCAGCCCAAA 60.594 61.111 0.00 0.00 0.00 3.28
684 714 2.281761 ACACGAGCCAGCCCAAAG 60.282 61.111 0.00 0.00 0.00 2.77
685 715 3.741476 CACGAGCCAGCCCAAAGC 61.741 66.667 0.00 0.00 44.25 3.51
694 724 4.604114 GCCCAAAGCAATCAAGCC 57.396 55.556 0.00 0.00 42.97 4.35
695 725 1.078918 GCCCAAAGCAATCAAGCCC 60.079 57.895 0.00 0.00 42.97 5.19
696 726 1.829523 GCCCAAAGCAATCAAGCCCA 61.830 55.000 0.00 0.00 42.97 5.36
697 727 0.037046 CCCAAAGCAATCAAGCCCAC 60.037 55.000 0.00 0.00 34.23 4.61
698 728 0.680618 CCAAAGCAATCAAGCCCACA 59.319 50.000 0.00 0.00 34.23 4.17
699 729 1.337447 CCAAAGCAATCAAGCCCACAG 60.337 52.381 0.00 0.00 34.23 3.66
700 730 1.614903 CAAAGCAATCAAGCCCACAGA 59.385 47.619 0.00 0.00 34.23 3.41
701 731 1.999648 AAGCAATCAAGCCCACAGAA 58.000 45.000 0.00 0.00 34.23 3.02
702 732 1.999648 AGCAATCAAGCCCACAGAAA 58.000 45.000 0.00 0.00 34.23 2.52
703 733 1.891150 AGCAATCAAGCCCACAGAAAG 59.109 47.619 0.00 0.00 34.23 2.62
704 734 1.670967 GCAATCAAGCCCACAGAAAGC 60.671 52.381 0.00 0.00 0.00 3.51
705 735 1.614903 CAATCAAGCCCACAGAAAGCA 59.385 47.619 0.00 0.00 0.00 3.91
706 736 1.999648 ATCAAGCCCACAGAAAGCAA 58.000 45.000 0.00 0.00 0.00 3.91
707 737 1.999648 TCAAGCCCACAGAAAGCAAT 58.000 45.000 0.00 0.00 0.00 3.56
708 738 3.153369 TCAAGCCCACAGAAAGCAATA 57.847 42.857 0.00 0.00 0.00 1.90
709 739 3.495331 TCAAGCCCACAGAAAGCAATAA 58.505 40.909 0.00 0.00 0.00 1.40
710 740 3.894427 TCAAGCCCACAGAAAGCAATAAA 59.106 39.130 0.00 0.00 0.00 1.40
711 741 3.942130 AGCCCACAGAAAGCAATAAAC 57.058 42.857 0.00 0.00 0.00 2.01
712 742 3.230134 AGCCCACAGAAAGCAATAAACA 58.770 40.909 0.00 0.00 0.00 2.83
713 743 3.640967 AGCCCACAGAAAGCAATAAACAA 59.359 39.130 0.00 0.00 0.00 2.83
714 744 4.100808 AGCCCACAGAAAGCAATAAACAAA 59.899 37.500 0.00 0.00 0.00 2.83
715 745 4.813697 GCCCACAGAAAGCAATAAACAAAA 59.186 37.500 0.00 0.00 0.00 2.44
716 746 5.050159 GCCCACAGAAAGCAATAAACAAAAG 60.050 40.000 0.00 0.00 0.00 2.27
717 747 6.279882 CCCACAGAAAGCAATAAACAAAAGA 58.720 36.000 0.00 0.00 0.00 2.52
718 748 6.200854 CCCACAGAAAGCAATAAACAAAAGAC 59.799 38.462 0.00 0.00 0.00 3.01
719 749 6.756074 CCACAGAAAGCAATAAACAAAAGACA 59.244 34.615 0.00 0.00 0.00 3.41
720 750 7.277539 CCACAGAAAGCAATAAACAAAAGACAA 59.722 33.333 0.00 0.00 0.00 3.18
721 751 8.110002 CACAGAAAGCAATAAACAAAAGACAAC 58.890 33.333 0.00 0.00 0.00 3.32
722 752 7.277760 ACAGAAAGCAATAAACAAAAGACAACC 59.722 33.333 0.00 0.00 0.00 3.77
723 753 6.475402 AGAAAGCAATAAACAAAAGACAACCG 59.525 34.615 0.00 0.00 0.00 4.44
724 754 5.508200 AGCAATAAACAAAAGACAACCGA 57.492 34.783 0.00 0.00 0.00 4.69
725 755 5.519722 AGCAATAAACAAAAGACAACCGAG 58.480 37.500 0.00 0.00 0.00 4.63
726 756 4.148174 GCAATAAACAAAAGACAACCGAGC 59.852 41.667 0.00 0.00 0.00 5.03
727 757 2.863401 AAACAAAAGACAACCGAGCC 57.137 45.000 0.00 0.00 0.00 4.70
728 758 1.029681 AACAAAAGACAACCGAGCCC 58.970 50.000 0.00 0.00 0.00 5.19
729 759 0.106918 ACAAAAGACAACCGAGCCCA 60.107 50.000 0.00 0.00 0.00 5.36
730 760 0.310854 CAAAAGACAACCGAGCCCAC 59.689 55.000 0.00 0.00 0.00 4.61
731 761 0.106918 AAAAGACAACCGAGCCCACA 60.107 50.000 0.00 0.00 0.00 4.17
732 762 0.106918 AAAGACAACCGAGCCCACAA 60.107 50.000 0.00 0.00 0.00 3.33
733 763 0.106918 AAGACAACCGAGCCCACAAA 60.107 50.000 0.00 0.00 0.00 2.83
734 764 0.818040 AGACAACCGAGCCCACAAAC 60.818 55.000 0.00 0.00 0.00 2.93
735 765 1.077357 ACAACCGAGCCCACAAACA 60.077 52.632 0.00 0.00 0.00 2.83
736 766 0.681564 ACAACCGAGCCCACAAACAA 60.682 50.000 0.00 0.00 0.00 2.83
737 767 0.030638 CAACCGAGCCCACAAACAAG 59.969 55.000 0.00 0.00 0.00 3.16
738 768 1.734388 AACCGAGCCCACAAACAAGC 61.734 55.000 0.00 0.00 0.00 4.01
739 769 2.644992 CGAGCCCACAAACAAGCC 59.355 61.111 0.00 0.00 0.00 4.35
740 770 2.919494 CGAGCCCACAAACAAGCCC 61.919 63.158 0.00 0.00 0.00 5.19
741 771 1.832167 GAGCCCACAAACAAGCCCA 60.832 57.895 0.00 0.00 0.00 5.36
742 772 1.809567 GAGCCCACAAACAAGCCCAG 61.810 60.000 0.00 0.00 0.00 4.45
743 773 2.736531 CCCACAAACAAGCCCAGC 59.263 61.111 0.00 0.00 0.00 4.85
744 774 2.132996 CCCACAAACAAGCCCAGCA 61.133 57.895 0.00 0.00 0.00 4.41
745 775 1.684386 CCCACAAACAAGCCCAGCAA 61.684 55.000 0.00 0.00 0.00 3.91
746 776 0.249573 CCACAAACAAGCCCAGCAAG 60.250 55.000 0.00 0.00 0.00 4.01
747 777 0.877213 CACAAACAAGCCCAGCAAGC 60.877 55.000 0.00 0.00 0.00 4.01
748 778 1.662446 CAAACAAGCCCAGCAAGCG 60.662 57.895 0.00 0.00 34.64 4.68
749 779 1.827789 AAACAAGCCCAGCAAGCGA 60.828 52.632 0.00 0.00 34.64 4.93
750 780 1.391157 AAACAAGCCCAGCAAGCGAA 61.391 50.000 0.00 0.00 34.64 4.70
751 781 2.075426 AACAAGCCCAGCAAGCGAAC 62.075 55.000 0.00 0.00 34.64 3.95
752 782 3.357079 AAGCCCAGCAAGCGAACG 61.357 61.111 0.00 0.00 34.64 3.95
753 783 3.825160 AAGCCCAGCAAGCGAACGA 62.825 57.895 0.00 0.00 34.64 3.85
754 784 4.090057 GCCCAGCAAGCGAACGAC 62.090 66.667 0.00 0.00 0.00 4.34
755 785 2.664851 CCCAGCAAGCGAACGACA 60.665 61.111 0.00 0.00 0.00 4.35
756 786 2.551270 CCAGCAAGCGAACGACAC 59.449 61.111 0.00 0.00 0.00 3.67
757 787 2.243957 CCAGCAAGCGAACGACACA 61.244 57.895 0.00 0.00 0.00 3.72
758 788 1.641140 CAGCAAGCGAACGACACAA 59.359 52.632 0.00 0.00 0.00 3.33
759 789 0.027455 CAGCAAGCGAACGACACAAA 59.973 50.000 0.00 0.00 0.00 2.83
760 790 0.730265 AGCAAGCGAACGACACAAAA 59.270 45.000 0.00 0.00 0.00 2.44
761 791 0.837605 GCAAGCGAACGACACAAAAC 59.162 50.000 0.00 0.00 0.00 2.43
762 792 1.462791 CAAGCGAACGACACAAAACC 58.537 50.000 0.00 0.00 0.00 3.27
763 793 1.088306 AAGCGAACGACACAAAACCA 58.912 45.000 0.00 0.00 0.00 3.67
764 794 0.655733 AGCGAACGACACAAAACCAG 59.344 50.000 0.00 0.00 0.00 4.00
765 795 0.928451 GCGAACGACACAAAACCAGC 60.928 55.000 0.00 0.00 0.00 4.85
766 796 0.653323 CGAACGACACAAAACCAGCG 60.653 55.000 0.00 0.00 0.00 5.18
767 797 0.653636 GAACGACACAAAACCAGCGA 59.346 50.000 0.00 0.00 0.00 4.93
768 798 1.263217 GAACGACACAAAACCAGCGAT 59.737 47.619 0.00 0.00 0.00 4.58
769 799 0.865769 ACGACACAAAACCAGCGATC 59.134 50.000 0.00 0.00 0.00 3.69
770 800 0.865111 CGACACAAAACCAGCGATCA 59.135 50.000 0.00 0.00 0.00 2.92
771 801 1.262950 CGACACAAAACCAGCGATCAA 59.737 47.619 0.00 0.00 0.00 2.57
772 802 2.286713 CGACACAAAACCAGCGATCAAA 60.287 45.455 0.00 0.00 0.00 2.69
773 803 3.300009 GACACAAAACCAGCGATCAAAG 58.700 45.455 0.00 0.00 0.00 2.77
774 804 2.948979 ACACAAAACCAGCGATCAAAGA 59.051 40.909 0.00 0.00 0.00 2.52
775 805 3.003689 ACACAAAACCAGCGATCAAAGAG 59.996 43.478 0.00 0.00 0.00 2.85
776 806 2.554032 ACAAAACCAGCGATCAAAGAGG 59.446 45.455 0.00 0.00 0.00 3.69
777 807 1.168714 AAACCAGCGATCAAAGAGGC 58.831 50.000 0.00 0.00 0.00 4.70
778 808 0.678048 AACCAGCGATCAAAGAGGCC 60.678 55.000 0.00 0.00 0.00 5.19
779 809 1.078214 CCAGCGATCAAAGAGGCCA 60.078 57.895 5.01 0.00 0.00 5.36
780 810 0.677731 CCAGCGATCAAAGAGGCCAA 60.678 55.000 5.01 0.00 0.00 4.52
781 811 1.386533 CAGCGATCAAAGAGGCCAAT 58.613 50.000 5.01 0.00 0.00 3.16
782 812 1.332997 CAGCGATCAAAGAGGCCAATC 59.667 52.381 5.01 0.00 0.00 2.67
783 813 1.065199 AGCGATCAAAGAGGCCAATCA 60.065 47.619 5.01 0.00 0.00 2.57
784 814 1.064654 GCGATCAAAGAGGCCAATCAC 59.935 52.381 5.01 0.00 0.00 3.06
785 815 1.672881 CGATCAAAGAGGCCAATCACC 59.327 52.381 5.01 0.00 0.00 4.02
786 816 2.726821 GATCAAAGAGGCCAATCACCA 58.273 47.619 5.01 0.00 0.00 4.17
787 817 2.673775 TCAAAGAGGCCAATCACCAA 57.326 45.000 5.01 0.00 0.00 3.67
788 818 2.238521 TCAAAGAGGCCAATCACCAAC 58.761 47.619 5.01 0.00 0.00 3.77
789 819 1.273327 CAAAGAGGCCAATCACCAACC 59.727 52.381 5.01 0.00 0.00 3.77
790 820 0.482446 AAGAGGCCAATCACCAACCA 59.518 50.000 5.01 0.00 0.00 3.67
791 821 0.706433 AGAGGCCAATCACCAACCAT 59.294 50.000 5.01 0.00 0.00 3.55
792 822 0.819582 GAGGCCAATCACCAACCATG 59.180 55.000 5.01 0.00 0.00 3.66
793 823 0.114954 AGGCCAATCACCAACCATGT 59.885 50.000 5.01 0.00 0.00 3.21
794 824 0.247185 GGCCAATCACCAACCATGTG 59.753 55.000 0.00 0.00 35.01 3.21
795 825 0.247185 GCCAATCACCAACCATGTGG 59.753 55.000 0.85 0.85 44.92 4.17
807 837 0.721154 CCATGTGGTGACGTCATTCG 59.279 55.000 23.12 7.38 46.00 3.34
808 838 1.671556 CCATGTGGTGACGTCATTCGA 60.672 52.381 23.12 3.97 42.86 3.71
809 839 1.390123 CATGTGGTGACGTCATTCGAC 59.610 52.381 23.12 16.78 42.86 4.20
810 840 0.671796 TGTGGTGACGTCATTCGACT 59.328 50.000 23.12 0.00 42.86 4.18
811 841 1.060713 GTGGTGACGTCATTCGACTG 58.939 55.000 23.12 0.00 42.86 3.51
812 842 0.955905 TGGTGACGTCATTCGACTGA 59.044 50.000 23.12 0.65 42.86 3.41
813 843 1.068541 TGGTGACGTCATTCGACTGAG 60.069 52.381 23.12 3.60 42.86 3.35
814 844 1.199327 GGTGACGTCATTCGACTGAGA 59.801 52.381 23.12 0.00 42.86 3.27
815 845 2.243407 GTGACGTCATTCGACTGAGAC 58.757 52.381 23.12 0.00 42.86 3.36
816 846 2.095668 GTGACGTCATTCGACTGAGACT 60.096 50.000 23.12 0.00 42.86 3.24
817 847 2.552743 TGACGTCATTCGACTGAGACTT 59.447 45.455 15.76 0.00 42.86 3.01
818 848 3.749609 TGACGTCATTCGACTGAGACTTA 59.250 43.478 15.76 0.00 42.86 2.24
819 849 4.142881 TGACGTCATTCGACTGAGACTTAG 60.143 45.833 15.76 0.00 42.86 2.18
820 850 3.102276 CGTCATTCGACTGAGACTTAGC 58.898 50.000 5.61 0.00 42.86 3.09
821 851 3.102276 GTCATTCGACTGAGACTTAGCG 58.898 50.000 5.61 0.06 39.22 4.26
822 852 3.007635 TCATTCGACTGAGACTTAGCGA 58.992 45.455 0.65 8.82 0.00 4.93
823 853 2.896243 TTCGACTGAGACTTAGCGAC 57.104 50.000 11.36 0.00 0.00 5.19
824 854 2.096220 TCGACTGAGACTTAGCGACT 57.904 50.000 8.82 0.00 0.00 4.18
825 855 1.732809 TCGACTGAGACTTAGCGACTG 59.267 52.381 8.82 0.00 0.00 3.51
826 856 1.732809 CGACTGAGACTTAGCGACTGA 59.267 52.381 5.54 0.00 0.00 3.41
827 857 2.222931 CGACTGAGACTTAGCGACTGAG 60.223 54.545 5.54 0.00 0.00 3.35
828 858 3.004171 GACTGAGACTTAGCGACTGAGA 58.996 50.000 5.82 0.00 0.00 3.27
829 859 2.745281 ACTGAGACTTAGCGACTGAGAC 59.255 50.000 5.82 0.86 0.00 3.36
830 860 2.085320 TGAGACTTAGCGACTGAGACC 58.915 52.381 5.82 0.00 0.00 3.85
831 861 2.290387 TGAGACTTAGCGACTGAGACCT 60.290 50.000 5.82 3.23 0.00 3.85
832 862 3.055312 TGAGACTTAGCGACTGAGACCTA 60.055 47.826 5.82 0.00 0.00 3.08
833 863 3.537580 AGACTTAGCGACTGAGACCTAG 58.462 50.000 5.82 0.00 0.00 3.02
834 864 3.198200 AGACTTAGCGACTGAGACCTAGA 59.802 47.826 5.82 0.00 0.00 2.43
835 865 3.272581 ACTTAGCGACTGAGACCTAGAC 58.727 50.000 5.82 0.00 0.00 2.59
836 866 1.937278 TAGCGACTGAGACCTAGACG 58.063 55.000 0.00 0.00 36.63 4.18
837 867 0.745128 AGCGACTGAGACCTAGACGG 60.745 60.000 0.00 0.00 34.72 4.79
838 868 0.743701 GCGACTGAGACCTAGACGGA 60.744 60.000 0.00 0.00 34.72 4.69
839 869 1.008329 CGACTGAGACCTAGACGGAC 58.992 60.000 0.00 0.00 36.31 4.79
1210 1470 1.300963 GATGGCACCTTCCTCAGCA 59.699 57.895 0.00 0.00 0.00 4.41
1553 2285 2.947532 CGGAGCCTGAAGACAGCCA 61.948 63.158 0.00 0.00 42.25 4.75
1559 2291 0.249868 CCTGAAGACAGCCACGTCAA 60.250 55.000 0.00 0.00 42.25 3.18
1576 2308 0.179215 CAACGACATTGCGCTCTTCC 60.179 55.000 9.73 0.00 33.86 3.46
1629 2414 2.069273 GTGGAGGAATGTCGTCAACAG 58.931 52.381 1.51 0.00 42.37 3.16
1692 2477 2.125673 GGTACGGCTGACACGCAT 60.126 61.111 0.00 0.00 34.00 4.73
1742 2530 0.879090 TCGACAGACATGTACGTGCT 59.121 50.000 15.12 10.12 40.68 4.40
1758 2546 1.080025 GCTGCGGAACTACCTCGTT 60.080 57.895 0.00 0.00 36.31 3.85
1760 2548 1.352156 CTGCGGAACTACCTCGTTGC 61.352 60.000 0.00 0.00 36.31 4.17
1797 2585 2.941415 GCTGATGGTGGAACGAAGGATT 60.941 50.000 0.00 0.00 38.12 3.01
1837 2625 1.144936 GCAGACTCGGGGATTGAGG 59.855 63.158 0.00 0.00 37.79 3.86
1841 2629 1.306141 ACTCGGGGATTGAGGAGCA 60.306 57.895 0.00 0.00 37.79 4.26
1842 2630 0.909610 ACTCGGGGATTGAGGAGCAA 60.910 55.000 0.00 0.00 41.53 3.91
1872 2660 2.613026 TCAAGGTCTTCGAAGCAACA 57.387 45.000 20.56 0.00 0.00 3.33
1918 2709 0.864797 GACCGAGGTCGATACGTTGC 60.865 60.000 6.51 0.00 43.02 4.17
1968 2759 0.684153 GCTCAGAGTCTCTCCCAGCT 60.684 60.000 14.13 0.00 34.64 4.24
2085 2960 4.152647 ACAACATGAGAGACCAGACAGTA 58.847 43.478 0.00 0.00 0.00 2.74
2200 3075 0.253044 AGGTACGCGGTACTACCAGA 59.747 55.000 21.45 0.00 38.47 3.86
2208 3087 4.005650 CGCGGTACTACCAGATAGGATTA 58.994 47.826 0.00 0.00 38.47 1.75
2210 3089 4.142730 GCGGTACTACCAGATAGGATTACG 60.143 50.000 6.06 0.00 38.47 3.18
2288 3178 5.656859 TAGACACTTCTAAAGCCTATGCTCA 59.343 40.000 0.00 0.00 39.13 4.26
2427 3347 2.795329 AGGTATGCCAAAACTCCTGTG 58.205 47.619 1.54 0.00 37.19 3.66
2451 3371 8.034804 GTGAAGATATTGGGTATTGCAGTTTTT 58.965 33.333 0.00 0.00 0.00 1.94
2472 3392 6.730001 TTTTAGGAAAAATACTCCCTCCCT 57.270 37.500 0.00 0.00 32.95 4.20
2473 3393 5.970501 TTAGGAAAAATACTCCCTCCCTC 57.029 43.478 0.00 0.00 32.95 4.30
2474 3394 3.124066 AGGAAAAATACTCCCTCCCTCC 58.876 50.000 0.00 0.00 32.95 4.30
2475 3395 2.175069 GGAAAAATACTCCCTCCCTCCC 59.825 54.545 0.00 0.00 0.00 4.30
2476 3396 2.993604 AAAATACTCCCTCCCTCCCT 57.006 50.000 0.00 0.00 0.00 4.20
2477 3397 2.498473 AAATACTCCCTCCCTCCCTC 57.502 55.000 0.00 0.00 0.00 4.30
2478 3398 0.568697 AATACTCCCTCCCTCCCTCC 59.431 60.000 0.00 0.00 0.00 4.30
2479 3399 1.381089 ATACTCCCTCCCTCCCTCCC 61.381 65.000 0.00 0.00 0.00 4.30
2480 3400 2.836293 TACTCCCTCCCTCCCTCCCA 62.836 65.000 0.00 0.00 0.00 4.37
2481 3401 2.879490 TCCCTCCCTCCCTCCCAA 60.879 66.667 0.00 0.00 0.00 4.12
2482 3402 2.127297 CCCTCCCTCCCTCCCAAA 59.873 66.667 0.00 0.00 0.00 3.28
2483 3403 1.543896 CCCTCCCTCCCTCCCAAAA 60.544 63.158 0.00 0.00 0.00 2.44
2484 3404 0.926220 CCCTCCCTCCCTCCCAAAAT 60.926 60.000 0.00 0.00 0.00 1.82
2485 3405 1.630894 CCCTCCCTCCCTCCCAAAATA 60.631 57.143 0.00 0.00 0.00 1.40
2486 3406 2.214201 CCTCCCTCCCTCCCAAAATAA 58.786 52.381 0.00 0.00 0.00 1.40
2487 3407 2.175715 CCTCCCTCCCTCCCAAAATAAG 59.824 54.545 0.00 0.00 0.00 1.73
2488 3408 2.853077 CTCCCTCCCTCCCAAAATAAGT 59.147 50.000 0.00 0.00 0.00 2.24
2489 3409 2.580783 TCCCTCCCTCCCAAAATAAGTG 59.419 50.000 0.00 0.00 0.00 3.16
2490 3410 2.311841 CCCTCCCTCCCAAAATAAGTGT 59.688 50.000 0.00 0.00 0.00 3.55
2491 3411 3.621558 CCTCCCTCCCAAAATAAGTGTC 58.378 50.000 0.00 0.00 0.00 3.67
2492 3412 3.270877 CTCCCTCCCAAAATAAGTGTCG 58.729 50.000 0.00 0.00 0.00 4.35
2493 3413 2.640826 TCCCTCCCAAAATAAGTGTCGT 59.359 45.455 0.00 0.00 0.00 4.34
2494 3414 3.073356 TCCCTCCCAAAATAAGTGTCGTT 59.927 43.478 0.00 0.00 0.00 3.85
2495 3415 3.439129 CCCTCCCAAAATAAGTGTCGTTC 59.561 47.826 0.00 0.00 0.00 3.95
2496 3416 4.069304 CCTCCCAAAATAAGTGTCGTTCA 58.931 43.478 0.00 0.00 0.00 3.18
2497 3417 4.517453 CCTCCCAAAATAAGTGTCGTTCAA 59.483 41.667 0.00 0.00 0.00 2.69
2498 3418 5.009210 CCTCCCAAAATAAGTGTCGTTCAAA 59.991 40.000 0.00 0.00 0.00 2.69
2499 3419 6.067263 TCCCAAAATAAGTGTCGTTCAAAG 57.933 37.500 0.00 0.00 0.00 2.77
2500 3420 5.591067 TCCCAAAATAAGTGTCGTTCAAAGT 59.409 36.000 0.00 0.00 0.00 2.66
2501 3421 6.095720 TCCCAAAATAAGTGTCGTTCAAAGTT 59.904 34.615 0.00 0.00 0.00 2.66
2502 3422 6.198216 CCCAAAATAAGTGTCGTTCAAAGTTG 59.802 38.462 0.00 0.00 0.00 3.16
2503 3423 6.750039 CCAAAATAAGTGTCGTTCAAAGTTGT 59.250 34.615 0.00 0.00 0.00 3.32
2504 3424 7.911205 CCAAAATAAGTGTCGTTCAAAGTTGTA 59.089 33.333 0.00 0.00 0.00 2.41
2505 3425 8.730427 CAAAATAAGTGTCGTTCAAAGTTGTAC 58.270 33.333 0.00 0.00 0.00 2.90
2506 3426 4.870221 AAGTGTCGTTCAAAGTTGTACC 57.130 40.909 0.00 0.00 0.00 3.34
2507 3427 3.864243 AGTGTCGTTCAAAGTTGTACCA 58.136 40.909 0.00 0.00 0.00 3.25
2508 3428 4.255301 AGTGTCGTTCAAAGTTGTACCAA 58.745 39.130 0.00 0.00 0.00 3.67
2509 3429 4.331717 AGTGTCGTTCAAAGTTGTACCAAG 59.668 41.667 0.00 0.00 0.00 3.61
2510 3430 4.093850 GTGTCGTTCAAAGTTGTACCAAGT 59.906 41.667 0.00 0.00 0.00 3.16
2511 3431 4.330620 TGTCGTTCAAAGTTGTACCAAGTC 59.669 41.667 0.00 0.00 0.00 3.01
2512 3432 4.330620 GTCGTTCAAAGTTGTACCAAGTCA 59.669 41.667 0.00 0.00 0.00 3.41
2513 3433 4.569162 TCGTTCAAAGTTGTACCAAGTCAG 59.431 41.667 0.00 0.00 0.00 3.51
2514 3434 4.598062 GTTCAAAGTTGTACCAAGTCAGC 58.402 43.478 0.00 0.00 0.00 4.26
2515 3435 2.869801 TCAAAGTTGTACCAAGTCAGCG 59.130 45.455 0.00 0.00 0.00 5.18
2516 3436 2.869801 CAAAGTTGTACCAAGTCAGCGA 59.130 45.455 0.00 0.00 0.00 4.93
2517 3437 2.150397 AGTTGTACCAAGTCAGCGAC 57.850 50.000 0.00 1.15 0.00 5.19
2518 3438 1.411246 AGTTGTACCAAGTCAGCGACA 59.589 47.619 10.52 0.00 34.60 4.35
2519 3439 1.525619 GTTGTACCAAGTCAGCGACAC 59.474 52.381 10.52 1.78 34.60 3.67
2520 3440 1.037493 TGTACCAAGTCAGCGACACT 58.963 50.000 10.52 0.00 34.60 3.55
2521 3441 1.411246 TGTACCAAGTCAGCGACACTT 59.589 47.619 10.52 2.45 34.60 3.16
2522 3442 2.624364 TGTACCAAGTCAGCGACACTTA 59.376 45.455 10.52 0.00 34.60 2.24
2523 3443 3.257375 TGTACCAAGTCAGCGACACTTAT 59.743 43.478 10.52 0.93 34.60 1.73
2524 3444 3.402628 ACCAAGTCAGCGACACTTATT 57.597 42.857 10.52 0.00 34.60 1.40
2525 3445 3.740115 ACCAAGTCAGCGACACTTATTT 58.260 40.909 10.52 0.00 34.60 1.40
2526 3446 4.134563 ACCAAGTCAGCGACACTTATTTT 58.865 39.130 10.52 0.00 34.60 1.82
2527 3447 4.024048 ACCAAGTCAGCGACACTTATTTTG 60.024 41.667 10.52 5.13 34.60 2.44
2528 3448 4.466828 CAAGTCAGCGACACTTATTTTGG 58.533 43.478 10.52 0.00 34.60 3.28
2529 3449 3.074412 AGTCAGCGACACTTATTTTGGG 58.926 45.455 10.52 0.00 34.60 4.12
2530 3450 3.071479 GTCAGCGACACTTATTTTGGGA 58.929 45.455 4.20 0.00 32.09 4.37
2531 3451 3.071479 TCAGCGACACTTATTTTGGGAC 58.929 45.455 0.00 0.00 0.00 4.46
2532 3452 2.073816 AGCGACACTTATTTTGGGACG 58.926 47.619 0.00 0.00 0.00 4.79
2533 3453 1.129811 GCGACACTTATTTTGGGACGG 59.870 52.381 0.00 0.00 0.00 4.79
2534 3454 2.690786 CGACACTTATTTTGGGACGGA 58.309 47.619 0.00 0.00 0.00 4.69
2535 3455 2.671396 CGACACTTATTTTGGGACGGAG 59.329 50.000 0.00 0.00 0.00 4.63
2536 3456 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2537 3457 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2538 3458 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2539 3459 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2560 3480 9.397280 AGGGAGTATAAACTAGAAAGAATTTGC 57.603 33.333 0.00 0.00 35.18 3.68
2584 3504 5.252969 TCAGAGCATAATTGGTTTGATGC 57.747 39.130 1.15 1.15 38.93 3.91
2585 3505 4.098349 TCAGAGCATAATTGGTTTGATGCC 59.902 41.667 5.24 0.00 44.65 4.40
2586 3506 4.025360 AGAGCATAATTGGTTTGATGCCA 58.975 39.130 5.24 0.00 44.65 4.92
2612 3532 3.804786 TGGCATGCCAAATAGTGATTG 57.195 42.857 36.95 0.00 44.12 2.67
2620 3540 4.114058 CCAAATAGTGATTGGTTGGCTG 57.886 45.455 0.00 0.00 41.95 4.85
2621 3541 3.514645 CAAATAGTGATTGGTTGGCTGC 58.485 45.455 0.00 0.00 0.00 5.25
2622 3542 1.767759 ATAGTGATTGGTTGGCTGCC 58.232 50.000 12.87 12.87 0.00 4.85
2623 3543 0.403655 TAGTGATTGGTTGGCTGCCA 59.596 50.000 19.30 19.30 0.00 4.92
2629 3549 2.725221 TTGGTTGGCTGCCAATTTTT 57.275 40.000 34.25 0.00 45.80 1.94
2664 3584 9.585099 TCTCACAAAATATTGTCAAATATTGGC 57.415 29.630 4.85 0.00 46.78 4.52
2665 3585 9.368674 CTCACAAAATATTGTCAAATATTGGCA 57.631 29.630 4.85 0.00 46.78 4.92
2674 3594 6.839124 TGTCAAATATTGGCAACTTCTGAT 57.161 33.333 0.00 0.00 43.24 2.90
2675 3595 7.230849 TGTCAAATATTGGCAACTTCTGATT 57.769 32.000 0.00 0.00 43.24 2.57
2676 3596 7.669427 TGTCAAATATTGGCAACTTCTGATTT 58.331 30.769 0.00 0.00 43.24 2.17
2677 3597 8.149647 TGTCAAATATTGGCAACTTCTGATTTT 58.850 29.630 0.00 0.00 43.24 1.82
2678 3598 8.437742 GTCAAATATTGGCAACTTCTGATTTTG 58.562 33.333 0.00 4.70 34.79 2.44
2679 3599 6.973229 AATATTGGCAACTTCTGATTTTGC 57.027 33.333 0.00 12.84 44.05 3.68
2685 3605 5.025986 GCAACTTCTGATTTTGCCAAATG 57.974 39.130 0.00 0.00 39.82 2.32
2686 3606 4.512571 GCAACTTCTGATTTTGCCAAATGT 59.487 37.500 0.00 0.00 39.82 2.71
2687 3607 5.007921 GCAACTTCTGATTTTGCCAAATGTT 59.992 36.000 0.00 0.00 39.82 2.71
2688 3608 6.423862 CAACTTCTGATTTTGCCAAATGTTG 58.576 36.000 0.00 5.05 32.35 3.33
2697 3617 3.702147 CCAAATGTTGGCTTGCCAA 57.298 47.368 21.59 21.59 45.17 4.52
2698 3618 1.964552 CCAAATGTTGGCTTGCCAAA 58.035 45.000 26.12 17.09 45.17 3.28
2699 3619 2.506444 CCAAATGTTGGCTTGCCAAAT 58.494 42.857 26.12 18.32 45.17 2.32
2700 3620 3.672808 CCAAATGTTGGCTTGCCAAATA 58.327 40.909 26.12 18.73 45.17 1.40
2701 3621 4.263435 CCAAATGTTGGCTTGCCAAATAT 58.737 39.130 26.12 19.92 45.17 1.28
2702 3622 4.701171 CCAAATGTTGGCTTGCCAAATATT 59.299 37.500 26.12 23.52 45.17 1.28
2703 3623 5.392165 CCAAATGTTGGCTTGCCAAATATTG 60.392 40.000 26.12 25.13 45.17 1.90
2720 3640 4.500396 GGCAATGCCGAATGTTGG 57.500 55.556 9.14 0.00 39.62 3.77
2729 3649 1.994916 CCGAATGTTGGCATCAAACC 58.005 50.000 1.83 0.00 33.50 3.27
2730 3650 1.271934 CCGAATGTTGGCATCAAACCA 59.728 47.619 1.83 0.00 33.50 3.67
2731 3651 2.288702 CCGAATGTTGGCATCAAACCAA 60.289 45.455 1.83 0.00 44.86 3.67
2794 3717 7.453393 ACATGTGATATATCATCGGAAAAGGT 58.547 34.615 18.18 4.51 39.30 3.50
2795 3718 8.593679 ACATGTGATATATCATCGGAAAAGGTA 58.406 33.333 18.18 0.00 39.30 3.08
2797 3720 8.827177 TGTGATATATCATCGGAAAAGGTAAC 57.173 34.615 18.18 1.62 39.30 2.50
2800 3723 9.839817 TGATATATCATCGGAAAAGGTAACAAA 57.160 29.630 11.49 0.00 41.41 2.83
2848 3772 9.130312 GACTGCGAAATAGTGAGGTAAATATAG 57.870 37.037 0.00 0.00 0.00 1.31
2850 3774 9.692749 CTGCGAAATAGTGAGGTAAATATAGAA 57.307 33.333 0.00 0.00 0.00 2.10
2901 3830 5.011738 TGGTAGTTTAGGAGGTCAACTGAAG 59.988 44.000 0.00 0.00 32.88 3.02
2996 3928 4.567959 GCTGGTTAATTGCAATGTCCAATC 59.432 41.667 22.07 16.04 32.07 2.67
3002 3934 7.649306 GGTTAATTGCAATGTCCAATCTATGAC 59.351 37.037 13.82 0.00 32.07 3.06
3020 3952 7.895759 TCTATGACGGATCATGATGAAATGTA 58.104 34.615 14.30 0.00 45.54 2.29
3021 3953 8.031277 TCTATGACGGATCATGATGAAATGTAG 58.969 37.037 14.30 8.76 45.54 2.74
3085 4020 2.417107 GCATCTATCAGATCAGCCTCCG 60.417 54.545 0.00 0.00 31.32 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 0.106149 ACTTTCCGAAAGAGGCACGT 59.894 50.000 24.57 1.36 41.02 4.49
119 123 1.303561 GCACAACCATGCCTCTGGA 60.304 57.895 4.24 0.00 39.86 3.86
241 258 4.050934 CCGAAAAAGGCACGCCCC 62.051 66.667 3.95 0.00 36.58 5.80
415 436 5.401531 TGTTTTATCTCTTAGACGCACCT 57.598 39.130 0.00 0.00 0.00 4.00
417 438 8.227791 TCAAAATGTTTTATCTCTTAGACGCAC 58.772 33.333 0.00 0.00 0.00 5.34
498 524 3.513438 TTGCAACAAGTGGCGCGT 61.513 55.556 8.43 0.00 0.00 6.01
511 541 0.260230 TCCAACTTTCCCAGGTTGCA 59.740 50.000 0.00 0.00 40.75 4.08
571 601 3.935203 GCAGAGATCATTCCAACTTTCGA 59.065 43.478 0.00 0.00 0.00 3.71
572 602 3.686241 TGCAGAGATCATTCCAACTTTCG 59.314 43.478 0.00 0.00 0.00 3.46
573 603 5.392811 CCTTGCAGAGATCATTCCAACTTTC 60.393 44.000 0.00 0.00 0.00 2.62
574 604 4.461781 CCTTGCAGAGATCATTCCAACTTT 59.538 41.667 0.00 0.00 0.00 2.66
575 605 4.015084 CCTTGCAGAGATCATTCCAACTT 58.985 43.478 0.00 0.00 0.00 2.66
576 606 3.265221 TCCTTGCAGAGATCATTCCAACT 59.735 43.478 0.00 0.00 0.00 3.16
577 607 3.614092 TCCTTGCAGAGATCATTCCAAC 58.386 45.455 0.00 0.00 0.00 3.77
578 608 3.265221 ACTCCTTGCAGAGATCATTCCAA 59.735 43.478 9.77 0.00 37.33 3.53
579 609 2.842496 ACTCCTTGCAGAGATCATTCCA 59.158 45.455 9.77 0.00 37.33 3.53
580 610 3.557228 ACTCCTTGCAGAGATCATTCC 57.443 47.619 9.77 0.00 37.33 3.01
581 611 5.275067 AGTACTCCTTGCAGAGATCATTC 57.725 43.478 9.77 0.00 37.33 2.67
582 612 4.100808 GGAGTACTCCTTGCAGAGATCATT 59.899 45.833 31.12 0.00 46.16 2.57
583 613 3.640967 GGAGTACTCCTTGCAGAGATCAT 59.359 47.826 31.12 0.00 46.16 2.45
584 614 3.027412 GGAGTACTCCTTGCAGAGATCA 58.973 50.000 31.12 0.00 46.16 2.92
585 615 3.726291 GGAGTACTCCTTGCAGAGATC 57.274 52.381 31.12 3.32 46.16 2.75
597 627 9.583765 AACGAAATCACTAATTAAGGAGTACTC 57.416 33.333 14.87 14.87 0.00 2.59
598 628 9.583765 GAACGAAATCACTAATTAAGGAGTACT 57.416 33.333 0.00 0.00 0.00 2.73
599 629 8.529911 CGAACGAAATCACTAATTAAGGAGTAC 58.470 37.037 0.00 0.00 0.00 2.73
600 630 8.246180 ACGAACGAAATCACTAATTAAGGAGTA 58.754 33.333 0.14 0.00 0.00 2.59
601 631 7.095270 ACGAACGAAATCACTAATTAAGGAGT 58.905 34.615 0.14 0.00 0.00 3.85
602 632 7.521509 ACGAACGAAATCACTAATTAAGGAG 57.478 36.000 0.14 0.00 0.00 3.69
603 633 7.894376 AACGAACGAAATCACTAATTAAGGA 57.106 32.000 0.14 0.00 0.00 3.36
604 634 7.691050 GGAAACGAACGAAATCACTAATTAAGG 59.309 37.037 0.14 0.00 0.00 2.69
605 635 8.440833 AGGAAACGAACGAAATCACTAATTAAG 58.559 33.333 0.14 0.00 0.00 1.85
606 636 8.314143 AGGAAACGAACGAAATCACTAATTAA 57.686 30.769 0.14 0.00 0.00 1.40
607 637 7.816031 AGAGGAAACGAACGAAATCACTAATTA 59.184 33.333 0.14 0.00 0.00 1.40
608 638 6.649557 AGAGGAAACGAACGAAATCACTAATT 59.350 34.615 0.14 0.00 0.00 1.40
609 639 6.090898 CAGAGGAAACGAACGAAATCACTAAT 59.909 38.462 0.14 0.00 0.00 1.73
610 640 5.404366 CAGAGGAAACGAACGAAATCACTAA 59.596 40.000 0.14 0.00 0.00 2.24
611 641 4.921515 CAGAGGAAACGAACGAAATCACTA 59.078 41.667 0.14 0.00 0.00 2.74
612 642 3.741344 CAGAGGAAACGAACGAAATCACT 59.259 43.478 0.14 0.00 0.00 3.41
613 643 3.493503 ACAGAGGAAACGAACGAAATCAC 59.506 43.478 0.14 0.00 0.00 3.06
614 644 3.724374 ACAGAGGAAACGAACGAAATCA 58.276 40.909 0.14 0.00 0.00 2.57
615 645 4.025145 ACAACAGAGGAAACGAACGAAATC 60.025 41.667 0.14 0.00 0.00 2.17
616 646 3.875134 ACAACAGAGGAAACGAACGAAAT 59.125 39.130 0.14 0.00 0.00 2.17
617 647 3.264104 ACAACAGAGGAAACGAACGAAA 58.736 40.909 0.14 0.00 0.00 3.46
618 648 2.896168 ACAACAGAGGAAACGAACGAA 58.104 42.857 0.14 0.00 0.00 3.85
619 649 2.589798 ACAACAGAGGAAACGAACGA 57.410 45.000 0.14 0.00 0.00 3.85
620 650 3.668596 AAACAACAGAGGAAACGAACG 57.331 42.857 0.00 0.00 0.00 3.95
621 651 7.800015 TTTAAAAACAACAGAGGAAACGAAC 57.200 32.000 0.00 0.00 0.00 3.95
622 652 8.030106 ACATTTAAAAACAACAGAGGAAACGAA 58.970 29.630 0.00 0.00 0.00 3.85
623 653 7.540299 ACATTTAAAAACAACAGAGGAAACGA 58.460 30.769 0.00 0.00 0.00 3.85
624 654 7.749539 ACATTTAAAAACAACAGAGGAAACG 57.250 32.000 0.00 0.00 0.00 3.60
625 655 9.967245 GAAACATTTAAAAACAACAGAGGAAAC 57.033 29.630 0.00 0.00 0.00 2.78
626 656 9.936759 AGAAACATTTAAAAACAACAGAGGAAA 57.063 25.926 0.00 0.00 0.00 3.13
629 659 8.953990 CGTAGAAACATTTAAAAACAACAGAGG 58.046 33.333 0.00 0.00 0.00 3.69
630 660 9.710979 TCGTAGAAACATTTAAAAACAACAGAG 57.289 29.630 0.00 0.00 0.00 3.35
639 669 9.622004 TGTGTGTTTTCGTAGAAACATTTAAAA 57.378 25.926 14.16 0.00 45.90 1.52
640 670 9.063739 GTGTGTGTTTTCGTAGAAACATTTAAA 57.936 29.630 14.16 0.00 45.90 1.52
641 671 8.235226 TGTGTGTGTTTTCGTAGAAACATTTAA 58.765 29.630 14.16 3.41 45.90 1.52
642 672 7.693120 GTGTGTGTGTTTTCGTAGAAACATTTA 59.307 33.333 14.16 5.61 45.90 1.40
643 673 6.525280 GTGTGTGTGTTTTCGTAGAAACATTT 59.475 34.615 14.16 0.00 45.90 2.32
644 674 6.025280 GTGTGTGTGTTTTCGTAGAAACATT 58.975 36.000 14.16 0.00 45.90 2.71
645 675 5.122554 TGTGTGTGTGTTTTCGTAGAAACAT 59.877 36.000 14.16 0.00 45.90 2.71
646 676 4.451435 TGTGTGTGTGTTTTCGTAGAAACA 59.549 37.500 9.32 9.32 45.90 2.83
647 677 4.784550 GTGTGTGTGTGTTTTCGTAGAAAC 59.215 41.667 0.00 5.34 45.90 2.78
648 678 4.434461 CGTGTGTGTGTGTTTTCGTAGAAA 60.434 41.667 0.00 0.00 45.90 2.52
649 679 3.061028 CGTGTGTGTGTGTTTTCGTAGAA 59.939 43.478 0.00 0.00 45.90 2.10
650 680 2.599527 CGTGTGTGTGTGTTTTCGTAGA 59.400 45.455 0.00 0.00 0.00 2.59
651 681 2.599527 TCGTGTGTGTGTGTTTTCGTAG 59.400 45.455 0.00 0.00 0.00 3.51
652 682 2.599527 CTCGTGTGTGTGTGTTTTCGTA 59.400 45.455 0.00 0.00 0.00 3.43
653 683 1.392168 CTCGTGTGTGTGTGTTTTCGT 59.608 47.619 0.00 0.00 0.00 3.85
654 684 1.850515 GCTCGTGTGTGTGTGTTTTCG 60.851 52.381 0.00 0.00 0.00 3.46
655 685 1.531058 GGCTCGTGTGTGTGTGTTTTC 60.531 52.381 0.00 0.00 0.00 2.29
656 686 0.450184 GGCTCGTGTGTGTGTGTTTT 59.550 50.000 0.00 0.00 0.00 2.43
657 687 0.675208 TGGCTCGTGTGTGTGTGTTT 60.675 50.000 0.00 0.00 0.00 2.83
658 688 1.078778 TGGCTCGTGTGTGTGTGTT 60.079 52.632 0.00 0.00 0.00 3.32
659 689 1.521457 CTGGCTCGTGTGTGTGTGT 60.521 57.895 0.00 0.00 0.00 3.72
660 690 2.885676 GCTGGCTCGTGTGTGTGTG 61.886 63.158 0.00 0.00 0.00 3.82
661 691 2.588877 GCTGGCTCGTGTGTGTGT 60.589 61.111 0.00 0.00 0.00 3.72
662 692 3.349006 GGCTGGCTCGTGTGTGTG 61.349 66.667 0.00 0.00 0.00 3.82
663 693 4.626081 GGGCTGGCTCGTGTGTGT 62.626 66.667 0.00 0.00 0.00 3.72
664 694 4.624364 TGGGCTGGCTCGTGTGTG 62.624 66.667 0.00 0.00 0.00 3.82
665 695 3.414136 TTTGGGCTGGCTCGTGTGT 62.414 57.895 0.00 0.00 0.00 3.72
666 696 2.594303 TTTGGGCTGGCTCGTGTG 60.594 61.111 0.00 0.00 0.00 3.82
667 697 2.281761 CTTTGGGCTGGCTCGTGT 60.282 61.111 0.00 0.00 0.00 4.49
668 698 3.741476 GCTTTGGGCTGGCTCGTG 61.741 66.667 0.00 0.00 38.06 4.35
669 699 3.790416 TTGCTTTGGGCTGGCTCGT 62.790 57.895 0.00 0.00 42.39 4.18
670 700 2.275547 GATTGCTTTGGGCTGGCTCG 62.276 60.000 0.00 0.00 42.39 5.03
671 701 1.252904 TGATTGCTTTGGGCTGGCTC 61.253 55.000 0.00 0.00 42.39 4.70
672 702 0.832983 TTGATTGCTTTGGGCTGGCT 60.833 50.000 0.00 0.00 42.39 4.75
673 703 0.390735 CTTGATTGCTTTGGGCTGGC 60.391 55.000 0.00 0.00 42.39 4.85
674 704 0.390735 GCTTGATTGCTTTGGGCTGG 60.391 55.000 0.00 0.00 42.39 4.85
675 705 0.390735 GGCTTGATTGCTTTGGGCTG 60.391 55.000 0.00 0.00 42.39 4.85
676 706 1.547472 GGGCTTGATTGCTTTGGGCT 61.547 55.000 0.00 0.00 42.39 5.19
677 707 1.078918 GGGCTTGATTGCTTTGGGC 60.079 57.895 0.00 0.00 42.22 5.36
678 708 0.037046 GTGGGCTTGATTGCTTTGGG 60.037 55.000 0.00 0.00 0.00 4.12
679 709 0.680618 TGTGGGCTTGATTGCTTTGG 59.319 50.000 0.00 0.00 0.00 3.28
680 710 1.614903 TCTGTGGGCTTGATTGCTTTG 59.385 47.619 0.00 0.00 0.00 2.77
681 711 1.999648 TCTGTGGGCTTGATTGCTTT 58.000 45.000 0.00 0.00 0.00 3.51
682 712 1.999648 TTCTGTGGGCTTGATTGCTT 58.000 45.000 0.00 0.00 0.00 3.91
683 713 1.891150 CTTTCTGTGGGCTTGATTGCT 59.109 47.619 0.00 0.00 0.00 3.91
684 714 1.670967 GCTTTCTGTGGGCTTGATTGC 60.671 52.381 0.00 0.00 0.00 3.56
685 715 1.614903 TGCTTTCTGTGGGCTTGATTG 59.385 47.619 0.00 0.00 0.00 2.67
686 716 1.999648 TGCTTTCTGTGGGCTTGATT 58.000 45.000 0.00 0.00 0.00 2.57
687 717 1.999648 TTGCTTTCTGTGGGCTTGAT 58.000 45.000 0.00 0.00 0.00 2.57
688 718 1.999648 ATTGCTTTCTGTGGGCTTGA 58.000 45.000 0.00 0.00 0.00 3.02
689 719 3.940209 TTATTGCTTTCTGTGGGCTTG 57.060 42.857 0.00 0.00 0.00 4.01
690 720 3.640967 TGTTTATTGCTTTCTGTGGGCTT 59.359 39.130 0.00 0.00 0.00 4.35
691 721 3.230134 TGTTTATTGCTTTCTGTGGGCT 58.770 40.909 0.00 0.00 0.00 5.19
692 722 3.658757 TGTTTATTGCTTTCTGTGGGC 57.341 42.857 0.00 0.00 0.00 5.36
693 723 6.200854 GTCTTTTGTTTATTGCTTTCTGTGGG 59.799 38.462 0.00 0.00 0.00 4.61
694 724 6.756074 TGTCTTTTGTTTATTGCTTTCTGTGG 59.244 34.615 0.00 0.00 0.00 4.17
695 725 7.754069 TGTCTTTTGTTTATTGCTTTCTGTG 57.246 32.000 0.00 0.00 0.00 3.66
696 726 7.277760 GGTTGTCTTTTGTTTATTGCTTTCTGT 59.722 33.333 0.00 0.00 0.00 3.41
697 727 7.515059 CGGTTGTCTTTTGTTTATTGCTTTCTG 60.515 37.037 0.00 0.00 0.00 3.02
698 728 6.475402 CGGTTGTCTTTTGTTTATTGCTTTCT 59.525 34.615 0.00 0.00 0.00 2.52
699 729 6.474102 TCGGTTGTCTTTTGTTTATTGCTTTC 59.526 34.615 0.00 0.00 0.00 2.62
700 730 6.334202 TCGGTTGTCTTTTGTTTATTGCTTT 58.666 32.000 0.00 0.00 0.00 3.51
701 731 5.897050 TCGGTTGTCTTTTGTTTATTGCTT 58.103 33.333 0.00 0.00 0.00 3.91
702 732 5.508200 TCGGTTGTCTTTTGTTTATTGCT 57.492 34.783 0.00 0.00 0.00 3.91
703 733 4.148174 GCTCGGTTGTCTTTTGTTTATTGC 59.852 41.667 0.00 0.00 0.00 3.56
704 734 4.679654 GGCTCGGTTGTCTTTTGTTTATTG 59.320 41.667 0.00 0.00 0.00 1.90
705 735 4.261867 GGGCTCGGTTGTCTTTTGTTTATT 60.262 41.667 0.00 0.00 0.00 1.40
706 736 3.254903 GGGCTCGGTTGTCTTTTGTTTAT 59.745 43.478 0.00 0.00 0.00 1.40
707 737 2.619646 GGGCTCGGTTGTCTTTTGTTTA 59.380 45.455 0.00 0.00 0.00 2.01
708 738 1.407618 GGGCTCGGTTGTCTTTTGTTT 59.592 47.619 0.00 0.00 0.00 2.83
709 739 1.029681 GGGCTCGGTTGTCTTTTGTT 58.970 50.000 0.00 0.00 0.00 2.83
710 740 0.106918 TGGGCTCGGTTGTCTTTTGT 60.107 50.000 0.00 0.00 0.00 2.83
711 741 0.310854 GTGGGCTCGGTTGTCTTTTG 59.689 55.000 0.00 0.00 0.00 2.44
712 742 0.106918 TGTGGGCTCGGTTGTCTTTT 60.107 50.000 0.00 0.00 0.00 2.27
713 743 0.106918 TTGTGGGCTCGGTTGTCTTT 60.107 50.000 0.00 0.00 0.00 2.52
714 744 0.106918 TTTGTGGGCTCGGTTGTCTT 60.107 50.000 0.00 0.00 0.00 3.01
715 745 0.818040 GTTTGTGGGCTCGGTTGTCT 60.818 55.000 0.00 0.00 0.00 3.41
716 746 1.098712 TGTTTGTGGGCTCGGTTGTC 61.099 55.000 0.00 0.00 0.00 3.18
717 747 0.681564 TTGTTTGTGGGCTCGGTTGT 60.682 50.000 0.00 0.00 0.00 3.32
718 748 0.030638 CTTGTTTGTGGGCTCGGTTG 59.969 55.000 0.00 0.00 0.00 3.77
719 749 1.734388 GCTTGTTTGTGGGCTCGGTT 61.734 55.000 0.00 0.00 0.00 4.44
720 750 2.193536 GCTTGTTTGTGGGCTCGGT 61.194 57.895 0.00 0.00 0.00 4.69
721 751 2.644992 GCTTGTTTGTGGGCTCGG 59.355 61.111 0.00 0.00 0.00 4.63
722 752 2.644992 GGCTTGTTTGTGGGCTCG 59.355 61.111 0.00 0.00 0.00 5.03
723 753 1.809567 CTGGGCTTGTTTGTGGGCTC 61.810 60.000 0.00 0.00 0.00 4.70
724 754 1.833934 CTGGGCTTGTTTGTGGGCT 60.834 57.895 0.00 0.00 0.00 5.19
725 755 2.736531 CTGGGCTTGTTTGTGGGC 59.263 61.111 0.00 0.00 0.00 5.36
726 756 1.684386 TTGCTGGGCTTGTTTGTGGG 61.684 55.000 0.00 0.00 0.00 4.61
727 757 0.249573 CTTGCTGGGCTTGTTTGTGG 60.250 55.000 0.00 0.00 0.00 4.17
728 758 0.877213 GCTTGCTGGGCTTGTTTGTG 60.877 55.000 0.00 0.00 0.00 3.33
729 759 1.442987 GCTTGCTGGGCTTGTTTGT 59.557 52.632 0.00 0.00 0.00 2.83
730 760 1.662446 CGCTTGCTGGGCTTGTTTG 60.662 57.895 0.00 0.00 0.00 2.93
731 761 1.391157 TTCGCTTGCTGGGCTTGTTT 61.391 50.000 0.00 0.00 0.00 2.83
732 762 1.827789 TTCGCTTGCTGGGCTTGTT 60.828 52.632 0.00 0.00 0.00 2.83
733 763 2.203337 TTCGCTTGCTGGGCTTGT 60.203 55.556 0.00 0.00 0.00 3.16
734 764 2.256461 GTTCGCTTGCTGGGCTTG 59.744 61.111 0.00 0.00 0.00 4.01
735 765 3.357079 CGTTCGCTTGCTGGGCTT 61.357 61.111 0.00 0.00 0.00 4.35
736 766 4.314440 TCGTTCGCTTGCTGGGCT 62.314 61.111 0.00 0.00 0.00 5.19
737 767 4.090057 GTCGTTCGCTTGCTGGGC 62.090 66.667 0.00 0.00 0.00 5.36
738 768 2.664851 TGTCGTTCGCTTGCTGGG 60.665 61.111 0.00 0.00 0.00 4.45
739 769 1.771073 TTGTGTCGTTCGCTTGCTGG 61.771 55.000 0.00 0.00 0.00 4.85
740 770 0.027455 TTTGTGTCGTTCGCTTGCTG 59.973 50.000 0.00 0.00 0.00 4.41
741 771 0.730265 TTTTGTGTCGTTCGCTTGCT 59.270 45.000 0.00 0.00 0.00 3.91
742 772 0.837605 GTTTTGTGTCGTTCGCTTGC 59.162 50.000 0.00 0.00 0.00 4.01
743 773 1.202087 TGGTTTTGTGTCGTTCGCTTG 60.202 47.619 0.00 0.00 0.00 4.01
744 774 1.063469 CTGGTTTTGTGTCGTTCGCTT 59.937 47.619 0.00 0.00 0.00 4.68
745 775 0.655733 CTGGTTTTGTGTCGTTCGCT 59.344 50.000 0.00 0.00 0.00 4.93
746 776 0.928451 GCTGGTTTTGTGTCGTTCGC 60.928 55.000 0.00 0.00 0.00 4.70
747 777 0.653323 CGCTGGTTTTGTGTCGTTCG 60.653 55.000 0.00 0.00 0.00 3.95
748 778 0.653636 TCGCTGGTTTTGTGTCGTTC 59.346 50.000 0.00 0.00 0.00 3.95
749 779 1.263217 GATCGCTGGTTTTGTGTCGTT 59.737 47.619 0.00 0.00 0.00 3.85
750 780 0.865769 GATCGCTGGTTTTGTGTCGT 59.134 50.000 0.00 0.00 0.00 4.34
751 781 0.865111 TGATCGCTGGTTTTGTGTCG 59.135 50.000 0.00 0.00 0.00 4.35
752 782 3.003275 TCTTTGATCGCTGGTTTTGTGTC 59.997 43.478 0.00 0.00 0.00 3.67
753 783 2.948979 TCTTTGATCGCTGGTTTTGTGT 59.051 40.909 0.00 0.00 0.00 3.72
754 784 3.558505 CTCTTTGATCGCTGGTTTTGTG 58.441 45.455 0.00 0.00 0.00 3.33
755 785 2.554032 CCTCTTTGATCGCTGGTTTTGT 59.446 45.455 0.00 0.00 0.00 2.83
756 786 2.669391 GCCTCTTTGATCGCTGGTTTTG 60.669 50.000 0.00 0.00 0.00 2.44
757 787 1.541588 GCCTCTTTGATCGCTGGTTTT 59.458 47.619 0.00 0.00 0.00 2.43
758 788 1.168714 GCCTCTTTGATCGCTGGTTT 58.831 50.000 0.00 0.00 0.00 3.27
759 789 0.678048 GGCCTCTTTGATCGCTGGTT 60.678 55.000 0.00 0.00 0.00 3.67
760 790 1.078143 GGCCTCTTTGATCGCTGGT 60.078 57.895 0.00 0.00 0.00 4.00
761 791 0.677731 TTGGCCTCTTTGATCGCTGG 60.678 55.000 3.32 0.00 0.00 4.85
762 792 1.332997 GATTGGCCTCTTTGATCGCTG 59.667 52.381 3.32 0.00 0.00 5.18
763 793 1.065199 TGATTGGCCTCTTTGATCGCT 60.065 47.619 3.32 0.00 0.00 4.93
764 794 1.064654 GTGATTGGCCTCTTTGATCGC 59.935 52.381 3.32 1.32 0.00 4.58
765 795 1.672881 GGTGATTGGCCTCTTTGATCG 59.327 52.381 3.32 0.00 0.00 3.69
766 796 2.726821 TGGTGATTGGCCTCTTTGATC 58.273 47.619 3.32 0.00 0.00 2.92
767 797 2.827921 GTTGGTGATTGGCCTCTTTGAT 59.172 45.455 3.32 0.00 0.00 2.57
768 798 2.238521 GTTGGTGATTGGCCTCTTTGA 58.761 47.619 3.32 0.00 0.00 2.69
769 799 1.273327 GGTTGGTGATTGGCCTCTTTG 59.727 52.381 3.32 0.00 0.00 2.77
770 800 1.133199 TGGTTGGTGATTGGCCTCTTT 60.133 47.619 3.32 0.00 0.00 2.52
771 801 0.482446 TGGTTGGTGATTGGCCTCTT 59.518 50.000 3.32 0.00 0.00 2.85
772 802 0.706433 ATGGTTGGTGATTGGCCTCT 59.294 50.000 3.32 0.00 0.00 3.69
773 803 0.819582 CATGGTTGGTGATTGGCCTC 59.180 55.000 3.32 0.00 0.00 4.70
774 804 0.114954 ACATGGTTGGTGATTGGCCT 59.885 50.000 3.32 0.00 0.00 5.19
775 805 0.247185 CACATGGTTGGTGATTGGCC 59.753 55.000 0.00 0.00 38.54 5.36
776 806 0.247185 CCACATGGTTGGTGATTGGC 59.753 55.000 0.00 0.00 38.54 4.52
785 815 5.482038 CGAATGACGTCACCACATGGTTG 62.482 52.174 22.71 0.56 41.05 3.77
786 816 3.440646 CGAATGACGTCACCACATGGTT 61.441 50.000 22.71 8.55 41.05 3.67
787 817 1.939381 CGAATGACGTCACCACATGGT 60.939 52.381 22.71 0.00 42.60 3.55
788 818 0.721154 CGAATGACGTCACCACATGG 59.279 55.000 22.71 2.34 38.02 3.66
789 819 1.390123 GTCGAATGACGTCACCACATG 59.610 52.381 22.71 7.99 43.13 3.21
790 820 1.710013 GTCGAATGACGTCACCACAT 58.290 50.000 22.71 0.56 43.13 3.21
791 821 3.188773 GTCGAATGACGTCACCACA 57.811 52.632 22.71 2.40 43.13 4.17
800 830 3.102276 CGCTAAGTCTCAGTCGAATGAC 58.898 50.000 12.21 3.90 45.86 3.06
801 831 3.007635 TCGCTAAGTCTCAGTCGAATGA 58.992 45.455 15.60 15.60 0.00 2.57
802 832 3.102276 GTCGCTAAGTCTCAGTCGAATG 58.898 50.000 6.51 6.51 0.00 2.67
803 833 3.011119 AGTCGCTAAGTCTCAGTCGAAT 58.989 45.455 0.00 0.00 0.00 3.34
804 834 2.159824 CAGTCGCTAAGTCTCAGTCGAA 59.840 50.000 0.00 0.00 0.00 3.71
805 835 1.732809 CAGTCGCTAAGTCTCAGTCGA 59.267 52.381 0.00 0.00 0.00 4.20
806 836 1.732809 TCAGTCGCTAAGTCTCAGTCG 59.267 52.381 0.00 0.00 0.00 4.18
807 837 3.004171 TCTCAGTCGCTAAGTCTCAGTC 58.996 50.000 0.00 0.00 0.00 3.51
808 838 2.745281 GTCTCAGTCGCTAAGTCTCAGT 59.255 50.000 0.00 0.00 0.00 3.41
809 839 2.096819 GGTCTCAGTCGCTAAGTCTCAG 59.903 54.545 0.00 0.00 0.00 3.35
810 840 2.085320 GGTCTCAGTCGCTAAGTCTCA 58.915 52.381 0.00 0.00 0.00 3.27
811 841 2.361789 AGGTCTCAGTCGCTAAGTCTC 58.638 52.381 0.00 0.00 0.00 3.36
812 842 2.500392 AGGTCTCAGTCGCTAAGTCT 57.500 50.000 0.00 0.00 0.00 3.24
813 843 3.310501 GTCTAGGTCTCAGTCGCTAAGTC 59.689 52.174 0.00 0.00 0.00 3.01
814 844 3.272581 GTCTAGGTCTCAGTCGCTAAGT 58.727 50.000 0.00 0.00 0.00 2.24
815 845 2.285756 CGTCTAGGTCTCAGTCGCTAAG 59.714 54.545 0.00 0.00 0.00 2.18
816 846 2.277969 CGTCTAGGTCTCAGTCGCTAA 58.722 52.381 0.00 0.00 0.00 3.09
817 847 1.472904 CCGTCTAGGTCTCAGTCGCTA 60.473 57.143 0.00 0.00 34.51 4.26
818 848 0.745128 CCGTCTAGGTCTCAGTCGCT 60.745 60.000 0.00 0.00 34.51 4.93
819 849 0.743701 TCCGTCTAGGTCTCAGTCGC 60.744 60.000 0.00 0.00 41.99 5.19
820 850 1.008329 GTCCGTCTAGGTCTCAGTCG 58.992 60.000 0.00 0.00 41.99 4.18
821 851 1.381522 GGTCCGTCTAGGTCTCAGTC 58.618 60.000 0.00 0.00 41.99 3.51
822 852 0.034283 GGGTCCGTCTAGGTCTCAGT 60.034 60.000 0.00 0.00 41.99 3.41
823 853 0.256464 AGGGTCCGTCTAGGTCTCAG 59.744 60.000 0.00 0.00 41.99 3.35
824 854 0.702902 AAGGGTCCGTCTAGGTCTCA 59.297 55.000 0.00 0.00 41.99 3.27
825 855 1.391577 GAAGGGTCCGTCTAGGTCTC 58.608 60.000 0.00 0.00 41.99 3.36
826 856 0.394080 CGAAGGGTCCGTCTAGGTCT 60.394 60.000 1.84 0.00 41.99 3.85
827 857 0.679321 ACGAAGGGTCCGTCTAGGTC 60.679 60.000 0.00 0.00 41.99 3.85
828 858 0.620556 TACGAAGGGTCCGTCTAGGT 59.379 55.000 0.00 0.00 40.95 3.08
829 859 1.978454 ATACGAAGGGTCCGTCTAGG 58.022 55.000 0.00 0.00 40.95 3.02
830 860 4.332268 GCTATATACGAAGGGTCCGTCTAG 59.668 50.000 0.00 0.00 40.95 2.43
831 861 4.256920 GCTATATACGAAGGGTCCGTCTA 58.743 47.826 0.00 0.00 40.95 2.59
832 862 3.080319 GCTATATACGAAGGGTCCGTCT 58.920 50.000 0.00 0.00 40.95 4.18
833 863 2.163211 GGCTATATACGAAGGGTCCGTC 59.837 54.545 0.00 0.00 40.95 4.79
834 864 2.165998 GGCTATATACGAAGGGTCCGT 58.834 52.381 0.00 0.00 43.26 4.69
835 865 2.163815 CAGGCTATATACGAAGGGTCCG 59.836 54.545 0.00 0.00 0.00 4.79
836 866 2.496470 CCAGGCTATATACGAAGGGTCC 59.504 54.545 0.00 0.00 0.00 4.46
837 867 3.193056 GTCCAGGCTATATACGAAGGGTC 59.807 52.174 0.00 0.00 0.00 4.46
838 868 3.163467 GTCCAGGCTATATACGAAGGGT 58.837 50.000 0.00 0.00 0.00 4.34
839 869 3.432378 AGTCCAGGCTATATACGAAGGG 58.568 50.000 0.00 0.00 0.00 3.95
887 921 0.039437 CGTTCCGGATCCGATCGATT 60.039 55.000 35.42 2.60 42.83 3.34
919 953 6.697455 CGAGTCCGTTCCAATATATGATATGG 59.303 42.308 0.00 0.00 0.00 2.74
1432 1692 4.437682 AGATGTCTTTGGACTTCACCAA 57.562 40.909 12.29 0.00 46.44 3.67
1553 2285 1.886861 GAGCGCAATGTCGTTGACGT 61.887 55.000 11.47 0.00 40.37 4.34
1559 2291 0.602638 TTGGAAGAGCGCAATGTCGT 60.603 50.000 11.47 0.00 0.00 4.34
1576 2308 1.135333 GAGGACGTAGAGCTTCCCTTG 59.865 57.143 0.00 0.00 36.26 3.61
1619 2372 0.318784 ACGAAGCTCCTGTTGACGAC 60.319 55.000 0.00 0.00 0.00 4.34
1629 2414 0.030908 CGTCCAGGATACGAAGCTCC 59.969 60.000 0.00 0.00 42.90 4.70
1680 2465 1.540607 CGTCGATATGCGTGTCAGCC 61.541 60.000 3.43 0.00 41.80 4.85
1681 2466 1.540607 CCGTCGATATGCGTGTCAGC 61.541 60.000 3.43 0.00 41.80 4.26
1683 2468 1.065109 CCCGTCGATATGCGTGTCA 59.935 57.895 3.43 0.00 41.80 3.58
1684 2469 1.660575 CCCCGTCGATATGCGTGTC 60.661 63.158 0.00 0.00 41.80 3.67
1685 2470 2.122797 TCCCCGTCGATATGCGTGT 61.123 57.895 0.00 0.00 41.80 4.49
1686 2471 1.660575 GTCCCCGTCGATATGCGTG 60.661 63.158 0.00 0.00 41.80 5.34
1687 2472 2.726274 GTCCCCGTCGATATGCGT 59.274 61.111 0.00 0.00 41.80 5.24
1688 2473 2.428569 CGTCCCCGTCGATATGCG 60.429 66.667 0.00 0.00 42.69 4.73
1689 2474 2.733593 GCGTCCCCGTCGATATGC 60.734 66.667 0.00 0.00 36.15 3.14
1690 2475 1.008875 CATGCGTCCCCGTCGATATG 61.009 60.000 0.00 0.00 36.15 1.78
1691 2476 1.289066 CATGCGTCCCCGTCGATAT 59.711 57.895 0.00 0.00 36.15 1.63
1692 2477 2.725641 CATGCGTCCCCGTCGATA 59.274 61.111 0.00 0.00 36.15 2.92
1728 2516 1.446099 CCGCAGCACGTACATGTCT 60.446 57.895 0.00 0.00 41.42 3.41
1742 2530 1.373748 GCAACGAGGTAGTTCCGCA 60.374 57.895 0.00 0.00 41.99 5.69
1797 2585 0.885196 GAAACATTGGCGGCTGGTAA 59.115 50.000 11.43 0.00 0.00 2.85
1820 2608 0.749649 CTCCTCAATCCCCGAGTCTG 59.250 60.000 0.00 0.00 0.00 3.51
1837 2625 2.734079 CCTTGAAGAGTCGAGTTTGCTC 59.266 50.000 0.00 0.00 33.82 4.26
1841 2629 4.623002 GAAGACCTTGAAGAGTCGAGTTT 58.377 43.478 0.00 0.00 38.08 2.66
1842 2630 3.304794 CGAAGACCTTGAAGAGTCGAGTT 60.305 47.826 0.00 0.00 38.08 3.01
1968 2759 2.742116 GCCGCTAGATTGACCCCCA 61.742 63.158 0.00 0.00 0.00 4.96
2200 3075 6.817184 ACTGCAACATCTAACGTAATCCTAT 58.183 36.000 0.00 0.00 0.00 2.57
2208 3087 6.257849 CCAATACATACTGCAACATCTAACGT 59.742 38.462 0.00 0.00 0.00 3.99
2210 3089 7.279981 TGACCAATACATACTGCAACATCTAAC 59.720 37.037 0.00 0.00 0.00 2.34
2288 3178 8.562892 CACACAGAAGATTATTTGTTCAGTCTT 58.437 33.333 0.00 0.00 0.00 3.01
2347 3264 3.299503 TGCCTGTGCAGATCTGTAGATA 58.700 45.455 23.38 8.14 44.23 1.98
2372 3289 1.864862 CTTGTGCACAAGCTCTCCG 59.135 57.895 38.56 20.02 45.59 4.63
2451 3371 4.725304 GGAGGGAGGGAGTATTTTTCCTAA 59.275 45.833 0.00 0.00 35.01 2.69
2452 3372 4.304659 GGAGGGAGGGAGTATTTTTCCTA 58.695 47.826 0.00 0.00 35.01 2.94
2453 3373 3.124066 GGAGGGAGGGAGTATTTTTCCT 58.876 50.000 0.00 0.00 35.01 3.36
2455 3375 3.124066 AGGGAGGGAGGGAGTATTTTTC 58.876 50.000 0.00 0.00 0.00 2.29
2459 3379 0.568697 GGAGGGAGGGAGGGAGTATT 59.431 60.000 0.00 0.00 0.00 1.89
2460 3380 1.381089 GGGAGGGAGGGAGGGAGTAT 61.381 65.000 0.00 0.00 0.00 2.12
2461 3381 2.019272 GGGAGGGAGGGAGGGAGTA 61.019 68.421 0.00 0.00 0.00 2.59
2462 3382 3.369388 GGGAGGGAGGGAGGGAGT 61.369 72.222 0.00 0.00 0.00 3.85
2463 3383 2.492599 TTTGGGAGGGAGGGAGGGAG 62.493 65.000 0.00 0.00 0.00 4.30
2464 3384 2.068841 TTTTGGGAGGGAGGGAGGGA 62.069 60.000 0.00 0.00 0.00 4.20
2465 3385 0.926220 ATTTTGGGAGGGAGGGAGGG 60.926 60.000 0.00 0.00 0.00 4.30
2466 3386 1.907240 TATTTTGGGAGGGAGGGAGG 58.093 55.000 0.00 0.00 0.00 4.30
2467 3387 2.853077 ACTTATTTTGGGAGGGAGGGAG 59.147 50.000 0.00 0.00 0.00 4.30
2468 3388 2.580783 CACTTATTTTGGGAGGGAGGGA 59.419 50.000 0.00 0.00 0.00 4.20
2469 3389 2.311841 ACACTTATTTTGGGAGGGAGGG 59.688 50.000 0.00 0.00 0.00 4.30
2470 3390 3.621558 GACACTTATTTTGGGAGGGAGG 58.378 50.000 0.00 0.00 0.00 4.30
2471 3391 3.270877 CGACACTTATTTTGGGAGGGAG 58.729 50.000 0.00 0.00 0.00 4.30
2472 3392 2.640826 ACGACACTTATTTTGGGAGGGA 59.359 45.455 0.00 0.00 0.00 4.20
2473 3393 3.067684 ACGACACTTATTTTGGGAGGG 57.932 47.619 0.00 0.00 0.00 4.30
2474 3394 4.069304 TGAACGACACTTATTTTGGGAGG 58.931 43.478 0.00 0.00 0.00 4.30
2475 3395 5.682943 TTGAACGACACTTATTTTGGGAG 57.317 39.130 0.00 0.00 0.00 4.30
2476 3396 5.591067 ACTTTGAACGACACTTATTTTGGGA 59.409 36.000 0.00 0.00 0.00 4.37
2477 3397 5.827666 ACTTTGAACGACACTTATTTTGGG 58.172 37.500 0.00 0.00 0.00 4.12
2478 3398 6.750039 ACAACTTTGAACGACACTTATTTTGG 59.250 34.615 0.00 0.00 0.00 3.28
2479 3399 7.734538 ACAACTTTGAACGACACTTATTTTG 57.265 32.000 0.00 0.00 0.00 2.44
2480 3400 7.911727 GGTACAACTTTGAACGACACTTATTTT 59.088 33.333 0.00 0.00 0.00 1.82
2481 3401 7.066043 TGGTACAACTTTGAACGACACTTATTT 59.934 33.333 0.00 0.00 31.92 1.40
2482 3402 6.539464 TGGTACAACTTTGAACGACACTTATT 59.461 34.615 0.00 0.00 31.92 1.40
2483 3403 6.050432 TGGTACAACTTTGAACGACACTTAT 58.950 36.000 0.00 0.00 31.92 1.73
2484 3404 5.417811 TGGTACAACTTTGAACGACACTTA 58.582 37.500 0.00 0.00 31.92 2.24
2485 3405 4.255301 TGGTACAACTTTGAACGACACTT 58.745 39.130 0.00 0.00 31.92 3.16
2486 3406 3.864243 TGGTACAACTTTGAACGACACT 58.136 40.909 0.00 0.00 31.92 3.55
2501 3421 1.037493 AGTGTCGCTGACTTGGTACA 58.963 50.000 9.49 0.00 33.15 2.90
2502 3422 2.150397 AAGTGTCGCTGACTTGGTAC 57.850 50.000 9.49 0.00 32.30 3.34
2503 3423 4.530710 AATAAGTGTCGCTGACTTGGTA 57.469 40.909 9.49 0.00 35.30 3.25
2504 3424 3.402628 AATAAGTGTCGCTGACTTGGT 57.597 42.857 9.49 0.00 35.30 3.67
2505 3425 4.466828 CAAAATAAGTGTCGCTGACTTGG 58.533 43.478 9.49 0.00 35.30 3.61
2506 3426 4.466828 CCAAAATAAGTGTCGCTGACTTG 58.533 43.478 9.49 4.71 35.30 3.16
2507 3427 3.502211 CCCAAAATAAGTGTCGCTGACTT 59.498 43.478 9.49 0.00 37.43 3.01
2508 3428 3.074412 CCCAAAATAAGTGTCGCTGACT 58.926 45.455 9.49 0.00 33.15 3.41
2509 3429 3.071479 TCCCAAAATAAGTGTCGCTGAC 58.929 45.455 2.32 2.32 0.00 3.51
2510 3430 3.071479 GTCCCAAAATAAGTGTCGCTGA 58.929 45.455 0.00 0.00 0.00 4.26
2511 3431 2.159707 CGTCCCAAAATAAGTGTCGCTG 60.160 50.000 0.00 0.00 0.00 5.18
2512 3432 2.073816 CGTCCCAAAATAAGTGTCGCT 58.926 47.619 0.00 0.00 0.00 4.93
2513 3433 1.129811 CCGTCCCAAAATAAGTGTCGC 59.870 52.381 0.00 0.00 0.00 5.19
2514 3434 2.671396 CTCCGTCCCAAAATAAGTGTCG 59.329 50.000 0.00 0.00 0.00 4.35
2515 3435 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2516 3436 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2517 3437 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2518 3438 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2519 3439 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2520 3440 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2521 3441 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2522 3442 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2523 3443 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2524 3444 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
2525 3445 2.767960 GTTTATACTCCCTCCGTCCCAA 59.232 50.000 0.00 0.00 0.00 4.12
2526 3446 2.023695 AGTTTATACTCCCTCCGTCCCA 60.024 50.000 0.00 0.00 0.00 4.37
2527 3447 2.675583 AGTTTATACTCCCTCCGTCCC 58.324 52.381 0.00 0.00 0.00 4.46
2528 3448 4.723309 TCTAGTTTATACTCCCTCCGTCC 58.277 47.826 0.00 0.00 35.78 4.79
2529 3449 6.545298 TCTTTCTAGTTTATACTCCCTCCGTC 59.455 42.308 0.00 0.00 35.78 4.79
2530 3450 6.430007 TCTTTCTAGTTTATACTCCCTCCGT 58.570 40.000 0.00 0.00 35.78 4.69
2531 3451 6.956202 TCTTTCTAGTTTATACTCCCTCCG 57.044 41.667 0.00 0.00 35.78 4.63
2534 3454 9.397280 GCAAATTCTTTCTAGTTTATACTCCCT 57.603 33.333 0.00 0.00 35.78 4.20
2535 3455 9.397280 AGCAAATTCTTTCTAGTTTATACTCCC 57.603 33.333 0.00 0.00 35.78 4.30
2560 3480 5.747197 GCATCAAACCAATTATGCTCTGAAG 59.253 40.000 0.00 0.00 41.16 3.02
2563 3483 4.142116 TGGCATCAAACCAATTATGCTCTG 60.142 41.667 8.17 0.00 43.33 3.35
2564 3484 4.025360 TGGCATCAAACCAATTATGCTCT 58.975 39.130 8.17 0.00 43.33 4.09
2565 3485 4.389890 TGGCATCAAACCAATTATGCTC 57.610 40.909 8.17 1.21 43.33 4.26
2566 3486 4.822685 TTGGCATCAAACCAATTATGCT 57.177 36.364 8.17 0.00 42.23 3.79
2567 3487 5.412286 ACTTTTGGCATCAAACCAATTATGC 59.588 36.000 0.00 0.00 46.25 3.14
2568 3488 7.299586 CAACTTTTGGCATCAAACCAATTATG 58.700 34.615 0.00 0.00 46.25 1.90
2569 3489 6.430616 CCAACTTTTGGCATCAAACCAATTAT 59.569 34.615 0.00 0.00 46.25 1.28
2570 3490 5.762218 CCAACTTTTGGCATCAAACCAATTA 59.238 36.000 0.00 0.00 46.25 1.40
2571 3491 4.579753 CCAACTTTTGGCATCAAACCAATT 59.420 37.500 0.00 0.00 46.25 2.32
2572 3492 4.136051 CCAACTTTTGGCATCAAACCAAT 58.864 39.130 0.00 0.00 46.25 3.16
2573 3493 3.539604 CCAACTTTTGGCATCAAACCAA 58.460 40.909 0.00 0.00 45.17 3.67
2574 3494 3.191078 CCAACTTTTGGCATCAAACCA 57.809 42.857 0.00 0.00 45.17 3.67
2592 3512 2.431419 CCAATCACTATTTGGCATGCCA 59.569 45.455 35.59 35.59 45.63 4.92
2593 3513 2.431782 ACCAATCACTATTTGGCATGCC 59.568 45.455 30.54 30.54 46.21 4.40
2594 3514 3.806625 ACCAATCACTATTTGGCATGC 57.193 42.857 9.90 9.90 46.21 4.06
2595 3515 4.435425 CCAACCAATCACTATTTGGCATG 58.565 43.478 2.45 0.00 46.21 4.06
2596 3516 3.118665 GCCAACCAATCACTATTTGGCAT 60.119 43.478 16.78 0.00 46.21 4.40
2597 3517 2.233431 GCCAACCAATCACTATTTGGCA 59.767 45.455 16.78 0.00 46.21 4.92
2598 3518 2.497273 AGCCAACCAATCACTATTTGGC 59.503 45.455 14.44 14.44 46.21 4.52
2600 3520 3.514645 GCAGCCAACCAATCACTATTTG 58.485 45.455 0.00 0.00 0.00 2.32
2601 3521 2.497273 GGCAGCCAACCAATCACTATTT 59.503 45.455 6.55 0.00 0.00 1.40
2602 3522 2.102578 GGCAGCCAACCAATCACTATT 58.897 47.619 6.55 0.00 0.00 1.73
2603 3523 1.005805 TGGCAGCCAACCAATCACTAT 59.994 47.619 13.33 0.00 33.12 2.12
2604 3524 0.403655 TGGCAGCCAACCAATCACTA 59.596 50.000 13.33 0.00 33.12 2.74
2605 3525 0.469705 TTGGCAGCCAACCAATCACT 60.470 50.000 23.88 0.00 42.23 3.41
2606 3526 2.048601 TTGGCAGCCAACCAATCAC 58.951 52.632 23.88 0.00 42.23 3.06
2607 3527 4.615170 TTGGCAGCCAACCAATCA 57.385 50.000 23.88 0.00 42.23 2.57
2610 3530 2.725221 AAAAATTGGCAGCCAACCAA 57.275 40.000 29.76 7.64 46.95 3.67
2638 3558 9.585099 GCCAATATTTGACAATATTTTGTGAGA 57.415 29.630 6.25 0.00 46.01 3.27
2639 3559 9.368674 TGCCAATATTTGACAATATTTTGTGAG 57.631 29.630 6.25 0.00 46.01 3.51
2640 3560 9.716531 TTGCCAATATTTGACAATATTTTGTGA 57.283 25.926 6.25 0.00 46.01 3.58
2641 3561 9.757859 GTTGCCAATATTTGACAATATTTTGTG 57.242 29.630 6.25 0.00 46.01 3.33
2646 3566 9.590451 CAGAAGTTGCCAATATTTGACAATATT 57.410 29.630 0.00 0.00 43.60 1.28
2647 3567 8.970020 TCAGAAGTTGCCAATATTTGACAATAT 58.030 29.630 0.00 0.00 35.51 1.28
2648 3568 8.347004 TCAGAAGTTGCCAATATTTGACAATA 57.653 30.769 0.00 0.00 35.51 1.90
2649 3569 7.230849 TCAGAAGTTGCCAATATTTGACAAT 57.769 32.000 0.00 0.00 35.51 2.71
2650 3570 6.647334 TCAGAAGTTGCCAATATTTGACAA 57.353 33.333 0.00 0.00 30.37 3.18
2651 3571 6.839124 ATCAGAAGTTGCCAATATTTGACA 57.161 33.333 0.00 0.00 0.00 3.58
2652 3572 8.437742 CAAAATCAGAAGTTGCCAATATTTGAC 58.562 33.333 0.00 0.00 0.00 3.18
2653 3573 7.118101 GCAAAATCAGAAGTTGCCAATATTTGA 59.882 33.333 9.37 0.00 41.41 2.69
2654 3574 7.238571 GCAAAATCAGAAGTTGCCAATATTTG 58.761 34.615 9.37 0.00 41.41 2.32
2655 3575 7.368480 GCAAAATCAGAAGTTGCCAATATTT 57.632 32.000 9.37 0.00 41.41 1.40
2656 3576 6.973229 GCAAAATCAGAAGTTGCCAATATT 57.027 33.333 9.37 0.00 41.41 1.28
2663 3583 4.512571 ACATTTGGCAAAATCAGAAGTTGC 59.487 37.500 17.70 11.38 45.48 4.17
2664 3584 6.423862 CAACATTTGGCAAAATCAGAAGTTG 58.576 36.000 17.70 16.48 33.59 3.16
2665 3585 5.528320 CCAACATTTGGCAAAATCAGAAGTT 59.472 36.000 17.70 9.90 45.17 2.66
2666 3586 5.058490 CCAACATTTGGCAAAATCAGAAGT 58.942 37.500 17.70 4.62 45.17 3.01
2667 3587 5.600908 CCAACATTTGGCAAAATCAGAAG 57.399 39.130 17.70 3.78 45.17 2.85
2703 3623 4.500396 CCAACATTCGGCATTGCC 57.500 55.556 18.10 18.10 46.75 4.52
2710 3630 1.271934 TGGTTTGATGCCAACATTCGG 59.728 47.619 0.00 0.00 36.35 4.30
2711 3631 2.721274 TGGTTTGATGCCAACATTCG 57.279 45.000 0.00 0.00 36.35 3.34
2718 3638 4.822685 AAGCATAATTGGTTTGATGCCA 57.177 36.364 5.24 0.00 44.65 4.92
2719 3639 7.790823 AATTAAGCATAATTGGTTTGATGCC 57.209 32.000 6.15 0.00 44.65 4.40
2736 3656 8.338986 GGAGACTGTTTCTTGCTATAATTAAGC 58.661 37.037 10.77 10.77 36.08 3.09
2737 3657 8.831550 GGGAGACTGTTTCTTGCTATAATTAAG 58.168 37.037 0.00 0.00 33.22 1.85
2824 3748 9.692749 TTCTATATTTACCTCACTATTTCGCAG 57.307 33.333 0.00 0.00 0.00 5.18
2848 3772 2.764572 TCTGGAGTTCCCTATCGGTTTC 59.235 50.000 0.00 0.00 35.38 2.78
2850 3774 2.544844 TCTGGAGTTCCCTATCGGTT 57.455 50.000 0.00 0.00 35.38 4.44
2852 3776 5.746990 AAATATCTGGAGTTCCCTATCGG 57.253 43.478 0.00 0.00 35.38 4.18
2853 3777 7.766278 CCAATAAATATCTGGAGTTCCCTATCG 59.234 40.741 0.00 0.00 35.38 2.92
2854 3778 8.606830 ACCAATAAATATCTGGAGTTCCCTATC 58.393 37.037 0.00 0.00 34.16 2.08
2855 3779 8.525729 ACCAATAAATATCTGGAGTTCCCTAT 57.474 34.615 0.00 0.00 34.16 2.57
2858 3782 7.746703 ACTACCAATAAATATCTGGAGTTCCC 58.253 38.462 0.00 0.00 34.16 3.97
2901 3830 6.263617 TCAACAAGTAAAACCCACTAACATCC 59.736 38.462 0.00 0.00 0.00 3.51
2996 3928 8.031277 TCTACATTTCATCATGATCCGTCATAG 58.969 37.037 4.86 4.94 43.14 2.23
3002 3934 7.601508 TCTGAATCTACATTTCATCATGATCCG 59.398 37.037 4.86 0.00 32.94 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.